Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
C19orf35	0	genome.wustl.edu	37	19	2280757	2280776	+	Frame_Shift_Del	DEL	CCTGCCGCTCCCTGCACCCA	CCTGCCGCTCCCTGCACCCA	-			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	CCTGCCGCTCCCTGCACCCA	CCTGCCGCTCCCTGCACCCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	19	2280757	2280776	CCTGCCGCTCCCTGCACCCA	-	DEL	C19orf35	ENST00000590316	human	ensembl	74_37	-1	known	frame_shift_del	c.174_155	p.V52fs	0.339:0.033:0.011:0.003:0.002:0.000:0.002:0.002:0.003:0.008:0.009:0.011:0.005:0.001:0.000:0.000:0.000:0.000:0.000:0.000	NULL	NULL	-	no_errors	C19orf35	HGNC	ENSG00000188305	tier1			NA	NA	NA	NA	NA	NA
GIN1	0	genome.wustl.edu	37	5	102432377	102432377	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	5	102432377	102432377	C	-	DEL	GIN1	ENST00000399004	human	ensembl	74_37	-1	known	frame_shift_del	c.1162	p.V388fs	1.000	NULL	pfam_Integrase_cat-core,pfam_Znf_H2C2_histone_UAS-bd,superfamily_RNaseH-like_dom,pfscan_Integrase_cat-core	-	no_errors	GIN1	HGNC	ENSG00000145723	tier1			81	0	0.00	36	10	21.74
ATXN1	0	genome.wustl.edu	37	6	16327921	16327921	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	6	16327921	16327921	C	A	SNP	ATXN1	ENST00000244769	human	ensembl	74_37	-1	known	missense	c.621	p.Q207H	0.022	NULL	pfam_Ataxin-1_HBP1,pfam_Capicua_tscrpt_rep_mod,superfamily_Ataxin-1_HBP1,smart_Ataxin_AXH_dom,pfscan_Ataxin-1_HBP1	-	no_errors	ATXN1	HGNC	ENSG00000124788	tier1	rs201030692	-	26	0	0.00	36	8	18.18
GBP2	0	genome.wustl.edu	37	1	89583433	89583433	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	1	89583433	89583433	C	T	SNP	GBP2	ENST00000370466	human	ensembl	74_37	-1	known	missense	c.452	p.R151Q	0.009	pfam_Guanylate-bd_N,superfamily_P-loop_NTPase	pfam_Guanylate-bd_C,pfam_Guanylate-bd_N,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP2	HGNC	ENSG00000162645	tier1	rs140765409	-	26	0	0.00	25	9	26.47
MYH3	0	genome.wustl.edu	37	17	10541139	10541139	+	Silent	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	17	10541139	10541139	C	T	SNP	MYH3	ENST00000226209	human	ensembl	74_37	-1	known	silent	c.3843	p.L1281	0.112	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH3	HGNC	ENSG00000109063	tier1	-	-	35	0	0.00	14	3	17.65
ZNF646	0	genome.wustl.edu	37	16	31092310	31092310	+	Silent	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	16	31092310	31092310	C	T	SNP	ZNF646	ENST00000300850	human	ensembl	74_37	+1	known	silent	c.4665	p.D1555	0.423	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF646	HGNC	ENSG00000167395	tier1	rs201208689	GMAF=0.0005	38	0	0.00	26	4	13.33
C14orf166B	0	genome.wustl.edu	37	14	77319755	77319755	+	Splice_Site	SNP	T	T	C			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	14	77319755	77319755	T	C	SNP	C14orf166B	ENST00000393774	human	ensembl	74_37	+1	known	splice_site	c.1008+2	e9+2	1.000	-	-	-	no_errors	C14orf166B	HGNC	ENSG00000100565	tier1	-	-	21	0	0.00	10	4	28.57
TMEM38A	0	genome.wustl.edu	37	19	16791255	16791255	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	19	16791255	16791255	G	A	SNP	TMEM38A	ENST00000187762	human	ensembl	74_37	+1	known	missense	c.329	p.C110Y	1.000	pfam_TRIC_channel	pfam_TRIC_channel	-	no_errors	TMEM38A	HGNC	ENSG00000072954	tier1	-	-	48	0	0.00	43	5	10.42
LRP1	0	genome.wustl.edu	37	12	57591343	57591343	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	12	57591343	57591343	G	A	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	missense	c.9178	p.V3060I	0.988	superfamily_Growth_fac_rcpt_N_dom,smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384	tier1	-	-	33	0	0.00	17	4	19.05
LPCAT1	0	genome.wustl.edu	37	5	1461990	1461990	+	RNA	DEL	A	A	-			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	5	1461990	1461990	A	-	DEL	LPCAT1	ENST00000503252	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LPCAT1	HGNC	ENSG00000153395	tier1			36	0	0.00	14	2	12.50
KIR3DX1	0	genome.wustl.edu	37	19	55048290	55048290	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	19	55048290	55048290	C	T	SNP	KIR3DX1	ENST00000335056	human	ensembl	74_37	+1	known	missense	c.857	p.T286M	0.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	KIR3DX1	HGNC	ENSG00000104970	tier1	-	-	66	0	0.00	25	21	45.65
MUC4	0	genome.wustl.edu	37	3	195518112	195518113	+	In_Frame_Ins	INS	-	-	GTCTCCTGCGTAACA			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	3	195518112	195518113	-	GTCTCCTGCGTAACA	INS	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	in_frame_ins	c.339_338	p.114in_frame_insVTQET	0.001:0.027	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1			NA	NA	NA	NA	NA	NA
SPPL2A	0	genome.wustl.edu	37	15	51040331	51040331	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	15	51040331	51040331	T	A	SNP	SPPL2A	ENST00000261854	human	ensembl	74_37	-1	known	missense	c.429	p.K143N	0.990	pfam_Protease-assoc_domain	pfam_Peptidase_A22B_SPP,pfam_Protease-assoc_domain,smart_Preselin/SPP	-	no_errors	SPPL2A	HGNC	ENSG00000138600	tier1	-	-	91	0	0.00	30	4	11.43
ENSG00000222043	0	genome.wustl.edu	37	2	178129391	178129399	+	RNA	DEL	GGCGGCGGC	GGCGGCGGC	-			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	GGCGGCGGC	GGCGGCGGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	2	178129391	178129399	GGCGGCGGC	-	DEL	ENSG00000222043	ENST00000428541	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.035:0.040:0.045:0.113:0.071:0.024:0.016:0.012:0.009	-	-	-	no_errors	AC079305.10	Clone_based_vega_gene	ENSG00000222043	tier1			NA	NA	NA	NA	NA	NA
PPP1R12B	0	genome.wustl.edu	37	1	202407189	202407190	+	Frame_Shift_Ins	INS	-	-	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	1	202407189	202407190	-	T	INS	PPP1R12B	ENST00000480184	human	ensembl	74_37	+1	novel	frame_shift_ins	c.1495_1496	p.F503fs	0.085:0.041	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PPP1R12B	HGNC	ENSG00000077157	tier1			24	0	0.00	16	2	11.11
MIR490	0	genome.wustl.edu	37	7	136849019	136849019	+	RNA	SNP	G	G	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	7	136849019	136849019	G	A	SNP	MIR490	ENST00000425981	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	hsa-mir-490	miRBase	ENSG00000234352	tier1	-	-	56	0	0.00	64	15	18.75
NKX1-1	0	genome.wustl.edu	37	4	1397136	1397136	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	4	1397136	1397136	G	T	SNP	NKX1-1	ENST00000422806	human	ensembl	74_37	-1	known	missense	c.820	p.L274M	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX1-1	HGNC	ENSG00000235608	tier1	-	-	23	0	0.00	8	3	27.27
PFKL	0	genome.wustl.edu	37	21	45738392	45738392	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	21	45738392	45738392	G	T	SNP	PFKL	ENST00000403390	human	ensembl	74_37	+1	known	nonsense	c.1117	p.E373*	1.000	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,tigrfam_6-phosphofructokinase_euk	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,prints_Phosphofructokinase,tigrfam_6-phosphofructokinase_euk	-	no_errors	PFKL	HGNC	ENSG00000141959	tier1	-	-	42	0	0.00	40	4	9.09
PARP6	0	genome.wustl.edu	37	15	72534537	72534537	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	15	72534537	72534537	G	T	SNP	PARP6	ENST00000287196	human	ensembl	74_37	-1	known	missense	c.1666	p.L556M	1.000	pfscan_Poly(ADP-ribose)pol_cat_dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP6	HGNC	ENSG00000137817	tier1	-	-	29	0	0.00	15	3	16.67
APPL2	0	genome.wustl.edu	37	12	105591572	105591572	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	12	105591572	105591572	G	T	SNP	APPL2	ENST00000551662	human	ensembl	74_37	-1	known	nonsense	c.1041	p.C347*	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_PTB/PI_dom,pfam_Pleckstrin_homology,pfam_PTB,smart_Pleckstrin_homology,smart_PTB/PI_dom,pfscan_Pleckstrin_homology,pfscan_PTB/PI_dom	-	no_errors	APPL2	HGNC	ENSG00000136044	tier1	-	-	31	0	0.00	16	4	20.00
SRRT	0	genome.wustl.edu	37	7	100479331	100479332	+	Frame_Shift_Ins	INS	-	-	G			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	7	100479331	100479332	-	G	INS	SRRT	ENST00000388793	human	ensembl	74_37	+1	known	frame_shift_ins	c.303_304	p.G104fs	0.996:1.000	NULL	pfam_Arsenite-R_2,pfam_DUF3546	-	no_errors	SRRT	HGNC	ENSG00000087087	tier1			19	0	0.00	18	3	14.29
PHEX	0	genome.wustl.edu	37	X	22196424	22196424	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	X	22196424	22196424	T	C	SNP	PHEX	ENST00000379374	human	ensembl	74_37	+1	known	missense	c.1517	p.V506A	1.000	NULL	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	PHEX	HGNC	ENSG00000102174	tier1	-	-	77	0	0.00	33	37	52.86
ENSG00000215923	0	genome.wustl.edu	37	12	16562191	16562191	+	RNA	DEL	G	G	-			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	12	16562191	16562191	G	-	DEL	ENSG00000215923	ENST00000401104	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AC007528.1	Clone_based_ensembl_gene	ENSG00000215923	tier1			45	0	0.00	13	2	13.33
ABCE1	0	genome.wustl.edu	37	4	146031349	146031349	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	4	146031349	146031349	T	A	SNP	ABCE1	ENST00000296577	human	ensembl	74_37	+1	known	missense	c.500	p.I167N	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,prints_ABC_E	pfam_ABC_transporter-like,pfam_RNaseL-inhib_metal-bd_dom,pfam_4Fe4S-bd_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,prints_ABC_E	-	no_errors	ABCE1	HGNC	ENSG00000164163	tier1	-	-	64	0	0.00	44	4	8.33
RNF149	0	genome.wustl.edu	37	2	101893720	101893720	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	2	101893720	101893720	G	T	SNP	RNF149	ENST00000295317	human	ensembl	74_37	-1	known	missense	c.1183	p.H395N	0.001	NULL	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF149	HGNC	ENSG00000163162	tier1	-	-	31	0	0.00	35	4	10.26
ELL3	0	genome.wustl.edu	37	15	44066407	44066407	+	Silent	SNP	T	T	C			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	15	44066407	44066407	T	C	SNP	ELL3	ENST00000319359	human	ensembl	74_37	-1	known	silent	c.1011	p.R337	0.998	pfam_Occludin_RNApol2_elong_fac_ELL	pfam_RNA_pol_II_elong_fac_ELL,pfam_Occludin_RNApol2_elong_fac_ELL	-	no_errors	ELL3	HGNC	ENSG00000128886	tier1	-	-	51	0	0.00	20	3	13.04
LILRB2	0	genome.wustl.edu	37	19	54780707	54780709	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	19	54780707	54780709	GAG	-	DEL	LILRB2	ENST00000391749	human	ensembl	74_37	-1	known	in_frame_del	c.1437_1435	p.L479in_frame_del	0.017:0.070:0.090	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB2	HGNC	ENSG00000131042	tier1			47	0	0.00	35	4	10.26
SLC26A9	0	genome.wustl.edu	37	1	205898419	205898419	+	Silent	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	1	205898419	205898419	G	T	SNP	SLC26A9	ENST00000340781	human	ensembl	74_37	-1	known	silent	c.783	p.I261	1.000	pfam_Sulph_transpt,tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A9	HGNC	ENSG00000174502	tier1	-	-	47	0	0.00	23	3	11.54
RBM10	0	genome.wustl.edu	37	X	47035947	47035947	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	X	47035947	47035947	C	T	SNP	RBM10	ENST00000377604	human	ensembl	74_37	+1	known	missense	c.625	p.P209S	1.000	pfscan_RRM_dom	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM10	HGNC	ENSG00000182872	tier1	-	-	50	0	0.00	29	9	23.68
MIR663B	0	genome.wustl.edu	37	2	133014546	133014546	+	RNA	SNP	C	C	G			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	2	133014546	133014546	C	G	SNP	MIR663B	ENST00000408361	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	MIR663B	HGNC	ENSG00000221288	tier1	-	-	41	0	0.00	27	5	15.62
FBXL12	0	genome.wustl.edu	37	19	9929421	9929421	+	Silent	SNP	G	G	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	19	9929421	9929421	G	A	SNP	FBXL12	ENST00000247977	human	ensembl	74_37	-1	known	silent	c.69	p.D23	1.000	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXL12	HGNC	ENSG00000127452	tier1	-	-	27	0	0.00	32	4	11.11
KLHL36	0	genome.wustl.edu	37	16	84690651	84690651	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	16	84690651	84690651	C	T	SNP	KLHL36	ENST00000564996	human	ensembl	74_37	+1	known	missense	c.238	p.R80W	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL36	HGNC	ENSG00000135686	tier1	-	-	31	0	0.00	26	4	13.33
ENSG00000221672	0	genome.wustl.edu	37	22	47243832	47243853	+	RNA	DEL	GTGTGTGTGTGTGTGTGTGTGC	GTGTGTGTGTGTGTGTGTGTGC	-			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	GTGTGTGTGTGTGTGTGTGTGC	GTGTGTGTGTGTGTGTGTGTGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	22	47243832	47243853	GTGTGTGTGTGTGTGTGTGTGC	-	DEL	ENSG00000221672	ENST00000408745	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.001:0.002:0.001:0.001:0.001:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.001:0.003:0.002:0.002:0.003:0.004:0.001	-	-	-	no_errors	Z97351.1	Clone_based_ensembl_gene	ENSG00000221672	tier1			NA	NA	NA	NA	NA	NA
ITIH4	0	genome.wustl.edu	37	3	52853932	52853932	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	3	52853932	52853932	T	C	SNP	ITIH4	ENST00000434759	human	ensembl	74_37	-1	known	missense	c.1672	p.R558G	0.000	NULL	pfam_VWF_A,pfam_VIT,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH4	HGNC	ENSG00000055955	tier1	-	-	61	0	0.00	40	4	9.09
TMEM104	0	genome.wustl.edu	37	17	72832223	72832223	+	Silent	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	17	72832223	72832223	C	T	SNP	TMEM104	ENST00000335464	human	ensembl	74_37	+1	known	silent	c.888	p.P296	0.849	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	TMEM104	HGNC	ENSG00000109066	tier1	-	-	36	0	0.00	16	3	15.79
DST	0	genome.wustl.edu	37	6	56485078	56485078	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	6	56485078	56485078	G	T	SNP	DST	ENST00000370765	human	ensembl	74_37	-1	known	missense	c.3754	p.L1252M	0.018	NULL	pfam_Plectin_repeat,pfam_Spectrin_repeat,superfamily_Ig/albumin-bd,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	25	0	0.00	19	4	17.39
MAOA	0	genome.wustl.edu	37	X	43571984	43571984	+	Silent	SNP	T	T	C			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	X	43571984	43571984	T	C	SNP	MAOA	ENST00000338702	human	ensembl	74_37	+1	known	silent	c.444	p.H148	0.967	pfam_Amino_oxidase	pfam_Amino_oxidase,pfam_FAD-dep_OxRdtase,pfam_mOase_FAD-bd,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_FAD_bind_dom,prints_Flavin_amine_oxidase	-	no_errors	MAOA	HGNC	ENSG00000189221	tier1	-	-	45	0	0.00	21	11	34.38
TCL6	0	genome.wustl.edu	37	14	96134782	96134782	+	RNA	SNP	G	G	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	14	96134782	96134782	G	A	SNP	TCL6	ENST00000352367	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	TCL6	HGNC	ENSG00000187621	tier1	-	-	14	0	0.00	7	9	56.25
SDHAF2	0	genome.wustl.edu	37	11	61205586	61205586	+	Splice_Site	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	11	61205586	61205586	G	T	SNP	SDHAF2	ENST00000301761	human	ensembl	74_37	+1	known	splice_site	c.370+1	e3+1	1.000	-	-	-	no_errors	SDHAF2	HGNC	ENSG00000167985	tier1	-	-	38	0	0.00	41	4	8.89
SLCO6A1	0	genome.wustl.edu	37	5	101794149	101794149	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	5	101794149	101794149	A	-	DEL	SLCO6A1	ENST00000379807	human	ensembl	74_37	-1	known	frame_shift_del	c.1068	p.F356fs	0.000	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO6A1	HGNC	ENSG00000205359	tier1			41	0	0.00	32	4	11.11
SULT6B1	0	genome.wustl.edu	37	2	37406711	37406711	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	2	37406711	37406711	C	T	SNP	SULT6B1	ENST00000535679	human	ensembl	74_37	-1	known	missense	c.419	p.R140Q	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	SULT6B1	HGNC	ENSG00000138068	tier1	rs11569744	-	37	0	0.00	24	8	25.00
PRDM16	0	genome.wustl.edu	37	1	3342727	3342727	+	Silent	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	1	3342727	3342727	G	T	SNP	PRDM16	ENST00000270722	human	ensembl	74_37	+1	known	silent	c.3222	p.S1074	0.254	NULL	pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM16	HGNC	ENSG00000142611	tier1	-	-	83	0	0.00	38	45	54.22
DNAH8	0	genome.wustl.edu	37	6	38794123	38794123	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	6	38794123	38794123	C	T	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	missense	c.3388	p.R1130C	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721	tier1	-	-	38	0	0.00	16	12	42.86
PARP10	0	genome.wustl.edu	37	8	145057487	145057487	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	8	145057487	145057487	C	T	SNP	PARP10	ENST00000313028	human	ensembl	74_37	-1	known	missense	c.2270	p.C757Y	0.010	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP10	HGNC	ENSG00000178685	tier1	-	-	57	0	0.00	36	13	26.53
MSH4	0	genome.wustl.edu	37	1	76276463	76276463	+	Silent	SNP	T	T	C			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	1	76276463	76276463	T	C	SNP	MSH4	ENST00000263187	human	ensembl	74_37	+1	known	silent	c.670	p.L224	1.000	pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mmatch_repair_MutS_con_dom	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH4	HGNC	ENSG00000057468	tier1	-	-	66	0	0.00	25	21	45.65
ASB13	0	genome.wustl.edu	37	10	5682032	5682032	+	RNA	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	10	5682032	5682032	C	T	SNP	ASB13	ENST00000479033	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ASB13	HGNC	ENSG00000196372	tier1	-	-	69	0	0.00	41	4	8.89
ARG2	0	genome.wustl.edu	37	14	68087671	68087671	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	14	68087671	68087671	C	T	SNP	ARG2	ENST00000261783	human	ensembl	74_37	+1	known	missense	c.172	p.L58F	1.000	pfam_Ureohydrolase,tigrfam_Arginase	pfam_Ureohydrolase,prints_Ureohydrolase,tigrfam_Arginase	-	no_errors	ARG2	HGNC	ENSG00000081181	tier1	-	-	56	0	0.00	24	5	17.24
ENSG00000226145	0	genome.wustl.edu	37	17	16722353	16722353	+	RNA	SNP	G	G	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	17	16722353	16722353	G	A	SNP	ENSG00000226145	ENST00000417510	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AC022596.6	Clone_based_vega_gene	ENSG00000226145	tier1	-	-	85	0	0.00	16	30	65.22
ZAP70	0	genome.wustl.edu	37	2	98340859	98340859	+	Silent	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	2	98340859	98340859	C	T	SNP	ZAP70	ENST00000264972	human	ensembl	74_37	+1	known	silent	c.360	p.D120	0.911	pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,superfamily_Kinase-like_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_SH2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ZAP70	HGNC	ENSG00000115085	tier1	-	-	14	0	0.00	7	7	50.00
ASTE1	0	genome.wustl.edu	37	3	130743806	130743806	+	Silent	SNP	A	A	G			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	3	130743806	130743806	A	G	SNP	ASTE1	ENST00000264992	human	ensembl	74_37	-1	known	silent	c.345	p.C115	0.064	NULL	pfam_XPG_DNA_repair_N	-	no_errors	ASTE1	HGNC	ENSG00000034533	tier1	-	-	39	0	0.00	22	4	15.38
NLRX1	0	genome.wustl.edu	37	11	119053027	119053027	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	11	119053027	119053027	G	T	SNP	NLRX1	ENST00000292199	human	ensembl	74_37	+1	known	missense	c.2579	p.R860L	0.560	smart_Leu-rich_rpt_RNase_inh_sub-typ	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase	-	no_errors	NLRX1	HGNC	ENSG00000160703	tier1	-	-	59	0	0.00	32	4	11.11
SMARCD1	0	genome.wustl.edu	37	12	50480064	50480064	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	12	50480064	50480064	C	A	SNP	SMARCD1	ENST00000394963	human	ensembl	74_37	+1	known	missense	c.298	p.R100S	1.000	NULL	pfam_SWIB_MDM2_domain,superfamily_SWIB_MDM2_domain,smart_SWIB_domain	-	no_errors	SMARCD1	HGNC	ENSG00000066117	tier1	-	-	47	0	0.00	16	3	15.79
NRBP1	0	genome.wustl.edu	37	2	27656657	27656658	+	Frame_Shift_Ins	INS	-	-	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	2	27656657	27656658	-	A	INS	NRBP1	ENST00000233557	human	ensembl	74_37	+1	known	frame_shift_ins	c.328_329	p.E111fs	1.000:1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NRBP1	HGNC	ENSG00000115216	tier1			54	0	0.00	13	2	13.33
SLC25A15	0	genome.wustl.edu	37	13	41367321	41367321	+	RNA	SNP	A	A	G			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	13	41367321	41367321	A	G	SNP	SLC25A15	ENST00000478827	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	SLC25A15	HGNC	ENSG00000102743	tier1	-	-	37	0	0.00	14	3	17.65
SRGAP3-AS1	0	genome.wustl.edu	37	3	9057425	9057425	+	RNA	SNP	A	A	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	3	9057425	9057425	A	T	SNP	SRGAP3-AS1	ENST00000414633	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SRGAP3-AS1	HGNC	ENSG00000224808	tier1	-	-	35	0	0.00	14	3	17.65
CSMD2	0	genome.wustl.edu	37	1	34006739	34006739	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	1	34006739	34006739	C	T	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	missense	c.9448	p.V3150I	0.683	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	tier1	rs139840174	-	75	0	0.00	44	19	30.16
KCNT1	0	genome.wustl.edu	37	9	138594181	138594181	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	9	138594181	138594181	C	-	DEL	KCNT1	ENST00000298480	human	ensembl	74_37	+1	known	frame_shift_del	c.77	p.F27fs	0.889	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT1	HGNC	ENSG00000107147	tier1			37	0	0.00	18	4	18.18
SNX14	0	genome.wustl.edu	37	6	86224338	86224338	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	6	86224338	86224338	C	T	SNP	SNX14	ENST00000314673	human	ensembl	74_37	-1	known	missense	c.2278	p.D760N	1.000	NULL	pfam_Phox_assoc,pfam_Sorting_nexin_C,pfam_Phox,pfam_RGS_dom,superfamily_Phox,superfamily_Regulat_G_prot_signal_superfam,smart_PX_assoc_Snx13,smart_Regulat_G_prot_signal_superfam,smart_Phox,pfscan_Phox,pfscan_Phox_assoc,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	SNX14	HGNC	ENSG00000135317	tier1	-	-	32	0	0.00	32	4	11.11
DHX35	0	genome.wustl.edu	37	20	37597728	37597728	+	Silent	SNP	A	A	G			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	20	37597728	37597728	A	G	SNP	DHX35	ENST00000252011	human	ensembl	74_37	+1	known	silent	c.45	p.T15	0.967	NULL	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX35	HGNC	ENSG00000101452	tier1	-	-	45	0	0.00	30	4	11.76
ACOT2	0	genome.wustl.edu	37	14	74042189	74042189	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	14	74042189	74042189	A	G	SNP	ACOT2	ENST00000238651	human	ensembl	74_37	+1	known	missense	c.1424	p.H475R	0.000	pirsf_Acyl-CoA_thioEstase_long-chain	pfam_BAAT_C,pfam_Thio_Ohase/aa_AcTrfase,pirsf_Acyl-CoA_thioEstase_long-chain	-	no_errors	ACOT2	HGNC	ENSG00000119673	tier1	rs7494	-	10	0	0.00	6	4	40.00
PTPN18	0	genome.wustl.edu	37	2	131129929	131129934	+	In_Frame_Del	DEL	GACGGG	GACGGG	-			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	GACGGG	GACGGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	2	131129929	131129934	GACGGG	-	DEL	PTPN18	ENST00000175756	human	ensembl	74_37	+1	known	in_frame_del	c.1113_1118	p.GT375in_frame_del	0.000:0.000:0.000:0.000:0.002:0.005	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN18	HGNC	ENSG00000072135	tier1			NA	NA	NA	NA	NA	NA
PLEKHM2	0	genome.wustl.edu	37	1	16045048	16045048	+	Silent	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	1	16045048	16045048	C	T	SNP	PLEKHM2	ENST00000375799	human	ensembl	74_37	+1	known	silent	c.393	p.C131	1.000	pfam_Run,smart_Run,pfscan_Run	pfam_Run,pfam_Pleckstrin_homology,smart_Run,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Run	-	no_errors	PLEKHM2	HGNC	ENSG00000116786	tier1	-	-	26	0	0.00	35	4	10.26
BSN	0	genome.wustl.edu	37	3	49690071	49690071	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	3	49690071	49690071	C	T	SNP	BSN	ENST00000296452	human	ensembl	74_37	+1	known	missense	c.3082	p.R1028C	1.000	NULL	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	-	no_errors	BSN	HGNC	ENSG00000164061	tier1	rs147015088	-	48	0	0.00	21	4	16.00
NDUFB2	0	genome.wustl.edu	37	7	140398056	140398056	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	7	140398056	140398056	G	T	SNP	NDUFB2	ENST00000204307	human	ensembl	74_37	+1	known	missense	c.56	p.R19L	0.000	NULL	NULL	-	no_errors	NDUFB2	HGNC	ENSG00000090266	tier1	-	-	45	0	0.00	20	12	37.50
MIR663B	0	genome.wustl.edu	37	2	133014557	133014557	+	RNA	SNP	G	G	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	2	133014557	133014557	G	A	SNP	MIR663B	ENST00000408361	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.067	-	-	-	no_errors	MIR663B	HGNC	ENSG00000221288	tier1	-	-	39	0	0.00	28	5	15.15
MUC19	0	genome.wustl.edu	37	12	40915329	40915329	+	RNA	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	12	40915329	40915329	G	T	SNP	MUC19	ENST00000398702	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.033	-	-	-	no_errors	MUC19	HGNC	ENSG00000205592	tier1	-	-	81	0	0.00	12	14	53.85
TMC6	0	genome.wustl.edu	37	17	76117780	76117780	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	17	76117780	76117780	C	T	SNP	TMC6	ENST00000322914	human	ensembl	74_37	-1	known	missense	c.1240	p.E414K	0.993	NULL	pfam_TMC	-	no_errors	TMC6	HGNC	ENSG00000141524	tier1	-	-	20	0	0.00	10	7	41.18
CLGN	0	genome.wustl.edu	37	4	141331038	141331038	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	4	141331038	141331038	G	T	SNP	CLGN	ENST00000325617	human	ensembl	74_37	-1	known	nonsense	c.230	p.S77*	1.000	pfam_Calret/calnex,superfamily_ConA-like_lec_gl_sf	pfam_Calret/calnex,superfamily_ConA-like_lec_gl_sf,superfamily_Calreticulin/calnexin_P_dom,prints_Calret/calnex	-	no_errors	CLGN	HGNC	ENSG00000153132	tier1	rs202031051	-	45	0	0.00	16	3	15.79
F2	0	genome.wustl.edu	37	11	46747683	46747683	+	Silent	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	11	46747683	46747683	G	T	SNP	F2	ENST00000311907	human	ensembl	74_37	+1	known	silent	c.834	p.G278	0.000	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pirsf_Prothrombin/thrombin,pfscan_Kringle	pfam_Peptidase_S1,pfam_Kringle,pfam_Thrombin_light_chain,pfam_GLA_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,superfamily_GLA_domain,smart_GLA_domain,smart_Kringle,smart_Peptidase_S1,pirsf_Prothrombin/thrombin,pfscan_GLA_domain,pfscan_Kringle,pfscan_Peptidase_S1,prints_Prothrombin/thrombin,prints_Peptidase_S1A,prints_GLA_domain	-	no_errors	F2	HGNC	ENSG00000180210	tier1	-	-	34	0	0.00	21	8	27.59
ENSG00000225946	0	genome.wustl.edu	37	7	100608194	100608195	+	RNA	INS	-	-	GTCTGGG			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	7	100608194	100608195	-	GTCTGGG	INS	ENSG00000225946	ENST00000420080	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	RP11-395B7.2	Clone_based_vega_gene	ENSG00000225946	tier1			NA	NA	NA	NA	NA	NA
WWP2	0	genome.wustl.edu	37	16	69832714	69832714	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	16	69832714	69832714	G	T	SNP	WWP2	ENST00000356003	human	ensembl	74_37	+1	known	missense	c.200	p.W67L	1.000	superfamily_C2_dom,smart_C2_dom	pfam_HECT,pfam_WW_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_WW_dom	-	no_errors	WWP2	HGNC	ENSG00000198373	tier1	-	-	52	0	0.00	41	4	8.89
TTK	0	genome.wustl.edu	37	6	80721152	80721152	+	Silent	SNP	A	A	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	6	80721152	80721152	A	T	SNP	TTK	ENST00000369798	human	ensembl	74_37	+1	known	silent	c.615	p.A205	0.058	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTK	HGNC	ENSG00000112742	tier1	-	-	59	0	0.00	27	4	12.90
ZNF80	0	genome.wustl.edu	37	3	113955740	113955740	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	3	113955740	113955740	T	-	DEL	ZNF80	ENST00000308095	human	ensembl	74_37	-1	known	frame_shift_del	c.182	p.N61fs	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF80	HGNC	ENSG00000174255	tier1			33	0	0.00	28	3	9.68
RCL1	0	genome.wustl.edu	37	9	4849484	4849484	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	9	4849484	4849484	T	C	SNP	RCL1	ENST00000381750	human	ensembl	74_37	+1	known	missense	c.905	p.L302P	0.999	pfam_RNA3'_phos_cyclase_dom,pirsf_RNA3'_term_phos_cyc,tigrfam_RNA3'_term_phos_cyc_type_2	pfam_RNA3'_phos_cyclase_dom,pfam_RNA3'-term_phos_cycl_insert,superfamily_RNA3'P_cycl/enolpyr_Trfase_a/b,pirsf_RNA3'_term_phos_cyc,tigrfam_RNA3'_term_phos_cyc_type_2	-	no_errors	RCL1	HGNC	ENSG00000120158	tier1	-	-	52	0	0.00	15	4	21.05
KHDRBS2	0	genome.wustl.edu	37	6	62757843	62757843	+	Silent	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	6	62757843	62757843	C	T	SNP	KHDRBS2	ENST00000281156	human	ensembl	74_37	-1	known	silent	c.276	p.Q92	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	KHDRBS2	HGNC	ENSG00000112232	tier1	-	-	46	0	0.00	37	4	9.76
PHRF1	0	genome.wustl.edu	37	11	591456	591456	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	11	591456	591456	A	G	SNP	PHRF1	ENST00000264555	human	ensembl	74_37	+1	known	missense	c.493	p.I165V	0.682	superfamily_Znf_FYVE_PHD	pfam_Znf_PHD-finger,pfam_Znf_C3HC4_RING-type,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	PHRF1	HGNC	ENSG00000070047	tier1	-	-	37	0	0.00	25	16	39.02
THOC1	0	genome.wustl.edu	37	18	260283	260283	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	18	260283	260283	G	T	SNP	THOC1	ENST00000261600	human	ensembl	74_37	-1	known	missense	c.278	p.P93H	1.000	pfam_THO_THOC1	pfam_THO_THOC1,pfam_Death_domain,superfamily_DEATH-like_dom,smart_Death_domain,pfscan_Death_domain	-	no_errors	THOC1	HGNC	ENSG00000079134	tier1	-	-	20	0	0.00	23	4	14.81
ABCF3	0	genome.wustl.edu	37	3	183910980	183910980	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	3	183910980	183910980	G	A	SNP	ABCF3	ENST00000429586	human	ensembl	74_37	+1	known	missense	c.1841	p.G614D	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCF3	HGNC	ENSG00000161204	tier1	-	-	59	0	0.00	30	12	28.57
ITGA1	0	genome.wustl.edu	37	5	52183738	52183738	+	Silent	SNP	C	C	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	5	52183738	52183738	C	A	SNP	ITGA1	ENST00000282588	human	ensembl	74_37	+1	known	silent	c.865	p.R289	0.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA1	HGNC	ENSG00000213949	tier1	-	-	42	0	0.00	41	4	8.89
ENSG00000254967	0	genome.wustl.edu	37	11	125825708	125825715	+	Splice_Site	DEL	ATAGGCCT	ATAGGCCT	-			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	ATAGGCCT	ATAGGCCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	11	125825708	125825715	ATAGGCCT	-	DEL	ENSG00000254967	ENST00000524962	human	ensembl	74_37	+1	known	splice_site_del	c.NULL	NULL	0.000:0.004:0.614:0.629:0.409:0.295:0.137:0.003	-	-	-	no_errors	RP11-680F20.6	Clone_based_vega_gene	ENSG00000254967	tier1			NA	NA	NA	NA	NA	NA
USP4	0	genome.wustl.edu	37	3	49373013	49373013	+	Silent	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	3	49373013	49373013	G	T	SNP	USP4	ENST00000265560	human	ensembl	74_37	-1	known	silent	c.118	p.R40	1.000	pfam_Pept_C19_DUSP,smart_Pept_C19_DUSP	pfam_Peptidase_C19/C67,pfam_Pept_C19_DUSP,smart_Pept_C19_DUSP,pfscan_Peptidase_C19/C67	-	no_errors	USP4	HGNC	ENSG00000114316	tier1	-	-	34	0	0.00	18	4	18.18
KRTAP4-5	0	genome.wustl.edu	37	17	39305800	39305814	+	In_Frame_Del	DEL	TGGATTCACAGCAAT	TGGATTCACAGCAAT	-			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	TGGATTCACAGCAAT	TGGATTCACAGCAAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	17	39305800	39305814	TGGATTCACAGCAAT	-	DEL	KRTAP4-5	ENST00000343246	human	ensembl	74_37	-1	known	in_frame_del	c.220_206	p.YCCESS69in_frame_delC	0.689:0.524:0.472:0.042:0.004:0.003:0.006:0.126:0.849:0.943:0.982:0.981:0.896:0.000:0.000	NULL	NULL	-	no_errors	KRTAP4-5	HGNC	ENSG00000198271	tier1			NA	NA	NA	NA	NA	NA
INHA	0	genome.wustl.edu	37	2	220439577	220439577	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	2	220439577	220439577	G	C	SNP	INHA	ENST00000243786	human	ensembl	74_37	+1	known	missense	c.430	p.A144P	0.065	pirsf_Inhibin_asu_subgr	pfam_TGF-b_C,smart_TGF-b_C,pirsf_Inhibin_asu_subgr,prints_Inhibin_asu	-	no_errors	INHA	HGNC	ENSG00000123999	tier1	-	-	61	0	0.00	16	9	36.00
BAI3	0	genome.wustl.edu	37	6	69684656	69684656	+	Silent	SNP	A	A	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	6	69684656	69684656	A	T	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	silent	c.1527	p.A509	0.999	pfscan_GPCR_2_extracellular_dom	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298	tier1	-	-	40	0	0.00	17	14	45.16
GPRIN2	0	genome.wustl.edu	37	10	47000213	47000213	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	10	47000213	47000213	C	T	SNP	GPRIN2	ENST00000374314	human	ensembl	74_37	+1	known	missense	c.1333	p.R445W	0.724	NULL	NULL	-	no_errors	GPRIN2	HGNC	ENSG00000204175	tier1	rs201166086	GMAF=0.0005	44	0	0.00	31	6	16.22
ANKRD50	0	genome.wustl.edu	37	4	125631194	125631194	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	4	125631194	125631194	G	T	SNP	ANKRD50	ENST00000504087	human	ensembl	74_37	-1	known	missense	c.473	p.P158H	0.998	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD50	HGNC	ENSG00000151458	tier1	-	-	71	0	0.00	39	4	9.30
PDE1A	0	genome.wustl.edu	37	2	183095805	183095805	+	Silent	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	2	183095805	183095805	C	T	SNP	PDE1A	ENST00000456212	human	ensembl	74_37	-1	known	silent	c.519	p.E173	0.207	NULL	pfam_PDEase_catalytic_dom,pfam_PDEase_N,superfamily_GRIP,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE1A	HGNC	ENSG00000115252	tier1	-	-	50	0	0.00	29	3	9.38
SLC47A2	0	genome.wustl.edu	37	17	19618456	19618456	+	Silent	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	17	19618456	19618456	C	T	SNP	SLC47A2	ENST00000325411	human	ensembl	74_37	-1	known	silent	c.198	p.E66	1.000	pfam_MATE	pfam_MATE,tigrfam_MATE	-	no_errors	SLC47A2	HGNC	ENSG00000180638	tier1	-	-	46	0	0.00	40	4	9.09
E2F6	0	genome.wustl.edu	37	2	11593912	11593912	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	2	11593912	11593912	A	G	SNP	E2F6	ENST00000381525	human	ensembl	74_37	-1	known	missense	c.176	p.V59A	1.000	NULL	pfam_E2F_TDP	-	no_errors	E2F6	HGNC	ENSG00000169016	tier1	-	-	40	0	0.00	15	3	16.67
RGL2	0	genome.wustl.edu	37	6	33263137	33263137	+	Silent	SNP	G	G	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	6	33263137	33263137	G	A	SNP	RGL2	ENST00000497454	human	ensembl	74_37	-1	known	silent	c.1083	p.S361	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Ras-assoc,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RGL2	HGNC	ENSG00000237441	tier1	-	-	53	0	0.00	31	25	44.64
PLXNA2	0	genome.wustl.edu	37	1	208199993	208199994	+	RNA	INS	-	-	TC			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	1	208199993	208199994	-	TC	INS	PLXNA2	ENST00000483048	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	PLXNA2	HGNC	ENSG00000076356	tier1			31	0	0.00	18	5	21.74
WDR65	0	genome.wustl.edu	37	1	43719692	43719692	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	1	43719692	43719692	A	G	SNP	WDR65	ENST00000372492	human	ensembl	74_37	+1	novel	missense	c.3583	p.N1195D	0.833	superfamily_Quinonprotein_ADH-like_supfam	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,superfamily_Prefoldin,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR65	HGNC	ENSG00000243710	tier1	-	-	38	0	0.00	26	4	13.33
PTK2	0	genome.wustl.edu	37	8	141754753	141754753	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	8	141754753	141754753	G	T	SNP	PTK2	ENST00000395218	human	ensembl	74_37	-1	known	missense	c.1632	p.H544Q	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Focal_adhesion_kin_target_dom,pfam_Prot_kinase_dom,pfam_FERM_central,superfamily_Kinase-like_dom,superfamily_Focal_adhesion_kin_target_dom,superfamily_FERM_central,smart_Band_41_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_FERM_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PTK2	HGNC	ENSG00000169398	tier1	-	-	42	0	0.00	28	3	9.68
SRR	0	genome.wustl.edu	37	17	2226627	2226627	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	17	2226627	2226627	G	T	SNP	SRR	ENST00000344595	human	ensembl	74_37	+1	known	missense	c.792	p.E264D	1.000	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF	-	no_errors	SRR	HGNC	ENSG00000167720	tier1	-	-	29	0	0.00	13	3	18.75
PNISR	0	genome.wustl.edu	37	6	99848036	99848036	+	RNA	DEL	A	A	-			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	6	99848036	99848036	A	-	DEL	PNISR	ENST00000481229	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.986	-	-	-	no_errors	PNISR	HGNC	ENSG00000132424	tier1			21	0	0.00	16	5	23.81
C6orf118	0	genome.wustl.edu	37	6	165706835	165706835	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	6	165706835	165706835	G	A	SNP	C6orf118	ENST00000543069	human	ensembl	74_37	-1	known	missense	c.875	p.A292V	0.001	NULL	superfamily_Ribonuclease/ribotoxin	-	no_errors	C6orf118	HGNC	ENSG00000112539	tier1	-	-	30	0	0.00	17	3	15.00
SPTA1	0	genome.wustl.edu	37	1	158583576	158583576	+	Silent	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	1	158583576	158583576	G	T	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	silent	c.6924	p.P2308	1.000	NULL	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554	tier1	-	-	52	0	0.00	28	11	28.21
CAPN11	0	genome.wustl.edu	37	6	44147871	44147871	+	Silent	SNP	G	G	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	6	44147871	44147871	G	A	SNP	CAPN11	ENST00000398776	human	ensembl	74_37	+1	known	silent	c.1611	p.R537	0.103	pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Calpain_III,prints_Calpain_cysteine_protease	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN11	HGNC	ENSG00000137225	tier1	-	-	28	0	0.00	16	3	15.79
MMP3	0	genome.wustl.edu	37	11	102713513	102713513	+	Silent	SNP	G	G	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	11	102713513	102713513	G	A	SNP	MMP3	ENST00000299855	human	ensembl	74_37	-1	known	silent	c.240	p.D80	0.954	pirsf_Pept_M10A_Metazoans,pfam_Peptidoglycan-bd-like,superfamily_Peptidoglycan-bd-like	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP3	HGNC	ENSG00000149968	tier1	-	-	45	0	0.00	43	4	8.51
BANF2	0	genome.wustl.edu	37	20	17716354	17716354	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	20	17716354	17716354	A	T	SNP	BANF2	ENST00000545418	human	ensembl	74_37	+1	known	missense	c.192	p.E64D	0.038	pfam_BAF_prot,superfamily_BAF_prot	pfam_BAF_prot,superfamily_BAF_prot	-	no_errors	BANF2	HGNC	ENSG00000125888	tier1	-	-	56	0	0.00	36	4	10.00
ENPP3	0	genome.wustl.edu	37	6	131997878	131997878	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	6	131997878	131997878	G	T	SNP	ENPP3	ENST00000357639	human	ensembl	74_37	+1	known	missense	c.875	p.S292I	0.001	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,pfam_Somatomedin_B_dom,pfam_DNA/RNA_non-sp_Endonuclease,superfamily_Alkaline_phosphatase_core,smart_Somatomedin_B_dom,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A,pfscan_Somatomedin_B_dom	-	no_errors	ENPP3	HGNC	ENSG00000154269	tier1	-	-	50	0	0.00	26	3	10.34
SAMM50	0	genome.wustl.edu	37	22	44368199	44368199	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	22	44368199	44368199	G	T	SNP	SAMM50	ENST00000350028	human	ensembl	74_37	+1	known	missense	c.406	p.V136F	1.000	NULL	pfam_Bac_surfAg_D15	-	no_errors	SAMM50	HGNC	ENSG00000100347	tier1	-	-	47	0	0.00	23	3	11.54
ATXN7L2	0	genome.wustl.edu	37	1	110034210	110034210	+	Silent	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	1	110034210	110034210	G	T	SNP	ATXN7L2	ENST00000369870	human	ensembl	74_37	+1	known	silent	c.2025	p.L675	1.000	NULL	pfam_SCA7_dom	-	no_errors	ATXN7L2	HGNC	ENSG00000162650	tier1	-	-	39	0	0.00	37	4	9.76
CNN1	0	genome.wustl.edu	37	19	11651944	11651944	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	19	11651944	11651944	G	T	SNP	CNN1	ENST00000252456	human	ensembl	74_37	+1	known	missense	c.117	p.E39D	1.000	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain,prints_SM22_calponin,prints_Calponin	pfam_Calponin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain,pfscan_Calponin_repeat,prints_SM22_calponin,prints_Calponin	-	no_errors	CNN1	HGNC	ENSG00000130176	tier1	-	-	46	0	0.00	32	4	11.11
NDST1	0	genome.wustl.edu	37	5	149901311	149901311	+	Silent	SNP	C	C	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	5	149901311	149901311	C	T	SNP	NDST1	ENST00000261797	human	ensembl	74_37	+1	known	silent	c.495	p.G165	1.000	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST1	HGNC	ENSG00000070614	tier1	-	-	51	0	0.00	37	4	9.76
ABCA13	0	genome.wustl.edu	37	7	48414001	48414001	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	7	48414001	48414001	G	T	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	nonsense	c.11191	p.G3731*	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869	tier1	-	-	36	0	0.00	24	4	14.29
IRAK3	0	genome.wustl.edu	37	12	66641685	66641685	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BZ-01A-11D-A37C-09	TCGA-DX-A8BZ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c7cff6a-631d-4d69-a1c4-f4fad062b011	79cb9ea0-57c1-4504-895d-6153d1f878b5	12	66641685	66641685	T	A	SNP	IRAK3	ENST00000261233	human	ensembl	74_37	+1	known	missense	c.1525	p.C509S	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,superfamily_Kinase-like_dom,superfamily_DEATH-like_dom,smart_Death_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Death_domain,pfscan_Prot_kinase_dom	-	no_errors	IRAK3	HGNC	ENSG00000090376	tier1	-	-	32	0	0.00	25	15	37.50
