Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
SIGLEC6	0	genome.wustl.edu	37	19	52031508	52031508	+	Splice_Site	SNP	C	C	T			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	19	52031508	52031508	C	T	SNP	SIGLEC6	ENST00000425629	human	ensembl	74_37	-1	known	splice_site	c.1013-1	e6-1	0.015	-	-	-	no_errors	SIGLEC6	HGNC	ENSG00000105492	tier1	-	-	53	0	0.00	50	33	39.76
VPS13B	0	genome.wustl.edu	37	8	100711854	100711854	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	8	100711854	100711854	A	G	SNP	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	missense	c.6223	p.S2075G	0.000	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549	tier1	-	-	47	0	0.00	34	20	37.04
PNPLA6	0	genome.wustl.edu	37	19	7622127	7622127	+	Silent	SNP	C	C	T			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	19	7622127	7622127	C	T	SNP	PNPLA6	ENST00000414982	human	ensembl	74_37	+1	known	silent	c.3384	p.D1128	0.970	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA6	HGNC	ENSG00000032444	tier1	-	-	156	0	0.00	84	78	48.15
PAIP1	0	genome.wustl.edu	37	5	43535014	43535014	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	5	43535014	43535014	C	G	SNP	PAIP1	ENST00000306846	human	ensembl	74_37	-1	known	missense	c.1138	p.V380L	1.000	NULL	pfam_MIF4G-like_typ-3,pfam_Ataxin-2_C,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	-	no_errors	PAIP1	HGNC	ENSG00000172239	tier1	-	-	113	0	0.00	66	50	43.10
BACH1	0	genome.wustl.edu	37	21	30968611	30968611	+	RNA	SNP	G	G	T			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	21	30968611	30968611	G	T	SNP	BACH1	ENST00000462262	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	BACH1	HGNC	ENSG00000156273	tier1	-	-	50	0	0.00	43	4	8.51
OBSL1	0	genome.wustl.edu	37	2	220435173	220435173	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	2	220435173	220435173	T	C	SNP	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	missense	c.782	p.K261R	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006	tier1	-	-	31	0	0.00	21	24	53.33
CHKB-AS1	0	genome.wustl.edu	37	22	51021601	51021601	+	RNA	SNP	G	G	A			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	22	51021601	51021601	G	A	SNP	CHKB-AS1	ENST00000380711	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CHKB-AS1	HGNC	ENSG00000205559	tier1	-	-	26	0	0.00	11	6	35.29
FAM71E2	0	genome.wustl.edu	37	19	55870230	55870230	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	19	55870230	55870230	C	T	SNP	FAM71E2	ENST00000424985	human	ensembl	74_37	-1	novel	missense	c.2006	p.R669Q	0.001	NULL	pfam_DUF3699	-	no_errors	FAM71E2	HGNC	ENSG00000180043	tier1	-	-	37	0	0.00	34	25	42.37
GRIN1	0	genome.wustl.edu	37	9	140036529	140036529	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	9	140036529	140036529	C	T	SNP	GRIN1	ENST00000371561	human	ensembl	74_37	+1	known	missense	c.323	p.S108F	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_CaM-bd_C0_NMDA_rcpt_NR1,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN1	HGNC	ENSG00000176884	tier1	-	-	72	0	0.00	41	24	36.92
ADCK4	0	genome.wustl.edu	37	19	41208580	41208580	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	19	41208580	41208580	C	G	SNP	ADCK4	ENST00000324464	human	ensembl	74_37	-1	known	missense	c.818	p.S273T	0.937	pfam_UbiB_dom,superfamily_Kinase-like_dom	pfam_UbiB_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK4	HGNC	ENSG00000123815	tier1	-	-	71	0	0.00	42	33	44.00
GAB1	0	genome.wustl.edu	37	4	144387374	144387374	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	4	144387374	144387374	G	A	SNP	GAB1	ENST00000262995	human	ensembl	74_37	+1	known	missense	c.2012	p.R671H	0.999	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	GAB1	HGNC	ENSG00000109458	tier1	-	-	70	0	0.00	44	53	54.08
IFT172	0	genome.wustl.edu	37	2	27684174	27684174	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	2	27684174	27684174	T	C	SNP	IFT172	ENST00000260570	human	ensembl	74_37	-1	known	missense	c.2404	p.I802V	1.000	superfamily_ARM-type_fold	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat	-	no_errors	IFT172	HGNC	ENSG00000138002	tier1	-	-	73	0	0.00	40	32	44.44
SMAD3	0	genome.wustl.edu	37	15	67473711	67473711	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	15	67473711	67473711	C	T	SNP	SMAD3	ENST00000327367	human	ensembl	74_37	+1	known	missense	c.791	p.S264F	1.000	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD3	HGNC	ENSG00000166949	tier1	-	-	66	0	0.00	31	21	40.38
CHKB-AS1	0	genome.wustl.edu	37	22	51021602	51021602	+	RNA	SNP	C	C	A			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	22	51021602	51021602	C	A	SNP	CHKB-AS1	ENST00000380711	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CHKB-AS1	HGNC	ENSG00000205559	tier1	-	-	26	0	0.00	11	6	35.29
CREBBP	0	genome.wustl.edu	37	16	3900553	3900553	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	16	3900553	3900553	A	-	DEL	CREBBP	ENST00000262367	human	ensembl	74_37	-1	known	frame_shift_del	c.543	p.F181fs	0.764	NULL	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CREBBP	HGNC	ENSG00000005339	tier1			60	0	0.00	44	36	45.00
NAA25	0	genome.wustl.edu	37	12	112512476	112512477	+	Splice_Site	INS	-	-	A			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	12	112512476	112512477	-	A	INS	NAA25	ENST00000261745	human	ensembl	74_37	-1	known	splice_site_ins	c.866+2_866+1	e9+2	1.000:1.000	-	-	-	no_errors	NAA25	HGNC	ENSG00000111300	tier1			22	0	0.00	37	9	19.57
NFE2L3	0	genome.wustl.edu	37	7	26224911	26224914	+	Frame_Shift_Del	DEL	AGAT	AGAT	-			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	AGAT	AGAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	7	26224911	26224914	AGAT	-	DEL	NFE2L3	ENST00000056233	human	ensembl	74_37	+1	known	frame_shift_del	c.1593_1596	p.D532fs	0.001:0.001:0.000:0.000	NULL	pfam_bZIP,pfam_bZIP_Maf,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	NFE2L3	HGNC	ENSG00000050344	tier1			112	0	0.00	62	25	28.74
MAP7D1	0	genome.wustl.edu	37	1	36643568	36643568	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	1	36643568	36643568	C	A	SNP	MAP7D1	ENST00000373151	human	ensembl	74_37	+1	known	missense	c.1474	p.P492T	1.000	NULL	pfam_MAP7	-	no_errors	MAP7D1	HGNC	ENSG00000116871	tier1	-	-	38	0	0.00	23	19	45.24
TG	0	genome.wustl.edu	37	8	134042071	134042071	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	8	134042071	134042071	G	A	SNP	TG	ENST00000220616	human	ensembl	74_37	+1	known	missense	c.7042	p.G2348R	0.000	pfam_CarbesteraseB,pirsf_Thyroglobulin	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832	tier1	-	-	97	0	0.00	41	42	50.60
MFSD5	0	genome.wustl.edu	37	12	53647129	53647129	+	Silent	SNP	C	C	G			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	12	53647129	53647129	C	G	SNP	MFSD5	ENST00000534842	human	ensembl	74_37	+1	known	silent	c.831	p.T277	0.988	pfam_DUF791,pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_DUF791,pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD5	HGNC	ENSG00000182544	tier1	-	-	42	0	0.00	82	19	18.81
BAZ2A	0	genome.wustl.edu	37	12	56993005	56993005	+	Silent	SNP	T	T	G			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	12	56993005	56993005	T	G	SNP	BAZ2A	ENST00000551812	human	ensembl	74_37	-1	known	silent	c.5316	p.A1772	0.000	superfamily_Bromodomain	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_dom,superfamily_Znf_FYVE_PHD,smart_Methyl_CpG_DNA-bd,smart_AT_hook_DNA-bd_motif,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2A	HGNC	ENSG00000076108	tier1	-	-	47	0	0.00	54	21	28.00
ATP5O	0	genome.wustl.edu	37	21	35284619	35284619	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	21	35284619	35284619	C	A	SNP	ATP5O	ENST00000290299	human	ensembl	74_37	-1	known	missense	c.172	p.V58L	1.000	pfam_ATPase_F1-cplx_OSCP/dsu,superfamily_ATPase_OSCP/delta_N,tigrfam_ATPase_F1-cplx_OSCP/dsu	pfam_ATPase_F1-cplx_OSCP/dsu,superfamily_ATPase_OSCP/delta_N,prints_ATPase_F1-cplx_OSCP/dsu,tigrfam_ATPase_F1-cplx_OSCP/dsu	-	no_errors	ATP5O	HGNC	ENSG00000241837	tier1	-	-	76	0	0.00	45	25	35.71
DZIP3	0	genome.wustl.edu	37	3	108361310	108361310	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	3	108361310	108361310	A	G	SNP	DZIP3	ENST00000361582	human	ensembl	74_37	+1	known	missense	c.1090	p.I364V	0.597	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	DZIP3	HGNC	ENSG00000198919	tier1	-	-	59	0	0.00	31	28	46.67
SPAG11B	0	genome.wustl.edu	37	8	7320316	7320316	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	8	7320316	7320316	C	A	SNP	SPAG11B	ENST00000398462	human	ensembl	74_37	-1	known	missense	c.127	p.A43S	0.000	pfam_Sperm_Ag_HE2	pfam_Sperm_Ag_HE2,pfam_Defensin_beta-typ	-	no_errors	SPAG11B	HGNC	ENSG00000164871	tier1	-	-	86	0	0.00	85	19	18.27
DCAF12L1	0	genome.wustl.edu	37	X	125686013	125686013	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	X	125686013	125686013	G	T	SNP	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	missense	c.579	p.H193Q	0.994	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889	tier1	-	-	238	0	0.00	101	92	47.67
RPL11	0	genome.wustl.edu	37	1	24018316	24018331	+	Frame_Shift_Del	DEL	GGCGGTGAGTAGCTGG	GGCGGTGAGTAGCTGG	-			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	GGCGGTGAGTAGCTGG	GGCGGTGAGTAGCTGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	1	24018316	24018331	GGCGGTGAGTAGCTGG	-	DEL	RPL11	ENST00000374550	human	ensembl	74_37	+1	known	frame_shift_del	c.3_6	p.M1fs	1.000:1.000:1.000:1.000	pirsf_Ribosomal_L5	pfam_Ribosomal_L5,superfamily_Ribosomal_L5_domain,pirsf_Ribosomal_L5	-	no_errors	RPL11	HGNC	ENSG00000142676	tier1			NA	NA	NA	NA	NA	NA
GPRIN3	0	genome.wustl.edu	37	4	90169766	90169766	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	4	90169766	90169766	G	A	SNP	GPRIN3	ENST00000333209	human	ensembl	74_37	-1	known	missense	c.1496	p.T499M	0.000	NULL	NULL	-	no_errors	GPRIN3	HGNC	ENSG00000185477	tier1	-	-	28	0	0.00	19	19	50.00
COL19A1	0	genome.wustl.edu	37	6	70637883	70637883	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	6	70637883	70637883	T	C	SNP	COL19A1	ENST00000322773	human	ensembl	74_37	+1	known	missense	c.349	p.W117R	1.000	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Collagen,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL19A1	HGNC	ENSG00000082293	tier1	-	-	102	1	0.97	91	9	8.82
ADRM1	0	genome.wustl.edu	37	20	60878005	60878005	+	RNA	SNP	C	C	T			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	20	60878005	60878005	C	T	SNP	ADRM1	ENST00000491935	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	ADRM1	HGNC	ENSG00000130706	tier1	-	-	26	0	0.00	12	9	37.50
CORO1B	0	genome.wustl.edu	37	11	67209168	67209168	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	11	67209168	67209168	G	-	DEL	CORO1B	ENST00000545016	human	ensembl	74_37	-1	known	frame_shift_del	c.490	p.H164fs	0.000	NULL	pfam_DUF1899,pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO1B	HGNC	ENSG00000172725	tier1			43	0	0.00	45	4	8.16
CCDC129	0	genome.wustl.edu	37	7	31683280	31683280	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	7	31683280	31683280	G	T	SNP	CCDC129	ENST00000451887	human	ensembl	74_37	+1	known	missense	c.2374	p.A792S	0.000	NULL	NULL	-	no_errors	CCDC129	HGNC	ENSG00000180347	tier1	-	-	46	0	0.00	38	4	9.52
PDE3B	0	genome.wustl.edu	37	11	14891131	14891131	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	11	14891131	14891131	A	T	SNP	PDE3B	ENST00000282096	human	ensembl	74_37	+1	known	missense	c.3264	p.K1088N	0.998	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	-	no_errors	PDE3B	HGNC	ENSG00000152270	tier1	-	-	70	0	0.00	36	26	41.94
CUL4B	0	genome.wustl.edu	37	X	119681082	119681082	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	X	119681082	119681082	G	T	SNP	CUL4B	ENST00000404115	human	ensembl	74_37	-1	known	missense	c.739	p.L247I	1.000	pfam_Cullin_N,superfamily_Cullin_repeat-like_dom	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL4B	HGNC	ENSG00000158290	tier1	-	-	45	0	0.00	43	4	8.51
SF3B1	0	genome.wustl.edu	37	2	198266834	198266834	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	2	198266834	198266834	T	C	SNP	SF3B1	ENST00000335508	human	ensembl	74_37	-1	known	missense	c.2098	p.K700E	1.000	superfamily_ARM-type_fold	pfam_SF3b_su1,superfamily_ARM-type_fold	-	no_errors	SF3B1	HGNC	ENSG00000115524	tier1	-	-	31	0	0.00	20	13	39.39
TPTEP1	0	genome.wustl.edu	37	22	17131536	17131537	+	RNA	INS	-	-	CTG			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	22	17131536	17131537	-	CTG	INS	TPTEP1	ENST00000426585	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999:0.999	-	-	-	no_errors	TPTEP1	HGNC	ENSG00000100181	tier1			18	0	0.00	19	4	17.39
MMGT1	0	genome.wustl.edu	37	X	135047288	135047288	+	Silent	SNP	A	A	T			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	X	135047288	135047288	A	T	SNP	MMGT1	ENST00000433339	human	ensembl	74_37	-1	known	silent	c.486	p.G162	1.000	pfam_Magnesium_transport	pfam_Magnesium_transport	-	no_errors	MMGT1	HGNC	ENSG00000169446	tier1	-	-	35	0	0.00	34	25	42.37
TMEM255A	0	genome.wustl.edu	37	X	119425116	119425116	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	X	119425116	119425116	G	A	SNP	TMEM255A	ENST00000309720	human	ensembl	74_37	-1	known	missense	c.344	p.A115V	1.000	NULL	NULL	-	no_errors	TMEM255A	HGNC	ENSG00000125355	tier1	-	-	68	0	0.00	39	26	40.00
NCOA1	0	genome.wustl.edu	37	2	24985627	24985627	+	Silent	SNP	A	A	C			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	2	24985627	24985627	A	C	SNP	NCOA1	ENST00000348332	human	ensembl	74_37	+1	known	silent	c.4137	p.T1379	1.000	pirsf_Nuclear_rcpt_coactivator	pfam_DUF1518,pfam_SRC-1,pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA1	HGNC	ENSG00000084676	tier1	-	-	42	0	0.00	34	32	48.48
YWHAE	0	genome.wustl.edu	37	17	1265304	1265305	+	Splice_Site	INS	-	-	A			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	17	1265304	1265305	-	A	INS	YWHAE	ENST00000264335	human	ensembl	74_37	-1	known	splice_site_ins	c.265-3_265-2	e3-2	1.000:0.895	-	-	-	no_errors	YWHAE	HGNC	ENSG00000108953	tier1			58	0	0.00	43	4	8.51
CABP1	0	genome.wustl.edu	37	12	121093654	121093655	+	Frame_Shift_Del	DEL	GC	GC	-			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	12	121093654	121093655	GC	-	DEL	CABP1	ENST00000453000	human	ensembl	74_37	+1	putative	frame_shift_del	c.41_42	p.A15fs	0.000:0.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CABP1	HGNC	ENSG00000157782	tier1			50	0	0.00	88	13	12.87
EXOSC2	0	genome.wustl.edu	37	9	133576449	133576449	+	RNA	SNP	C	C	T			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	9	133576449	133576449	C	T	SNP	EXOSC2	ENST00000467138	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EXOSC2	HGNC	ENSG00000130713	tier1	-	-	19	0	0.00	14	7	33.33
PAFAH1B1	0	genome.wustl.edu	37	17	2584923	2584923	+	RNA	DEL	T	T	-			TCGA-DX-AB2J-01A-11D-A387-09	TCGA-DX-AB2J-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99dea98b-737e-44b4-a5fb-a73056d907f0	41d65688-6a36-465c-956a-66bfbb244ba2	17	2584923	2584923	T	-	DEL	PAFAH1B1	ENST00000574213	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.125	-	-	-	no_errors	PAFAH1B1	HGNC	ENSG00000007168	tier1			17	0	0.00	14	3	17.65
