Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
OR1G1	0	genome.wustl.edu	37	17	3030438	3030438	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	17	3030438	3030438	C	A	SNP	OR1G1	ENST00000328890	human	ensembl	74_37	-1	known	missense	c.408	p.M136I	0.915	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1G1	HGNC	ENSG00000183024	tier1	-	-	29	0	0.00	14	19	57.58
GPR98	0	genome.wustl.edu	37	5	90001356	90001356	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	5	90001356	90001356	A	G	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.8526	p.I2842M	0.019	smart_Calx_beta	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	tier1	-	-	66	0	0.00	37	6	13.95
GSG1	0	genome.wustl.edu	37	12	13237900	13237900	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	12	13237900	13237900	G	T	SNP	GSG1	ENST00000324458	human	ensembl	74_37	-1	known	missense	c.1024	p.Q342K	0.001	NULL	pfam_GSG-1	-	no_errors	GSG1	HGNC	ENSG00000111305	tier1	-	-	70	0	0.00	69	23	25.00
LRG1	0	genome.wustl.edu	37	19	4538293	4538293	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	19	4538293	4538293	G	A	SNP	LRG1	ENST00000306390	human	ensembl	74_37	-1	known	nonsense	c.703	p.Q235*	0.029	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRG1	HGNC	ENSG00000171236	tier1	-	-	50	0	0.00	65	12	15.58
OR7E14P	0	genome.wustl.edu	37	11	17073832	17073832	+	RNA	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	11	17073832	17073832	G	A	SNP	OR7E14P	ENST00000530490	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	OR7E14P	HGNC	ENSG00000184669	tier1	-	-	66	0	0.00	51	18	26.09
APMAP	0	genome.wustl.edu	37	20	24949549	24949549	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	20	24949549	24949549	C	T	SNP	APMAP	ENST00000217456	human	ensembl	74_37	-1	known	nonsense	c.1020	p.W340*	0.324	NULL	pfam_Strictosidine_synth_cons-reg,pfam_SGL	-	no_errors	APMAP	HGNC	ENSG00000101474	tier1	-	-	86	0	0.00	61	9	12.86
LINC00910	0	genome.wustl.edu	37	17	41466131	41466132	+	RNA	INS	-	-	GG			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	17	41466131	41466132	-	GG	INS	LINC00910	ENST00000586231	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	LINC00910	HGNC	ENSG00000188825	tier1			12	0	0.00	17	8	32.00
OR2A25	0	genome.wustl.edu	37	7	143771448	143771448	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	7	143771448	143771448	G	T	SNP	OR2A25	ENST00000408898	human	ensembl	74_37	+1	known	missense	c.136	p.G46W	0.014	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2A25	HGNC	ENSG00000221933	tier1	-	-	140	0	0.00	24	30	55.56
MYH15	0	genome.wustl.edu	37	3	108182019	108182020	+	Frame_Shift_Ins	INS	-	-	AATACAG			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	3	108182019	108182020	-	AATACAG	INS	MYH15	ENST00000273353	human	ensembl	74_37	-1	known	frame_shift_ins	c.1863_1862	p.Q622fs	0.999:0.977	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Lambda_DNA-bd_dom,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYH15	HGNC	ENSG00000144821	tier1			NA	NA	NA	NA	NA	NA
EMR2	0	genome.wustl.edu	37	19	14877108	14877108	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	19	14877108	14877108	G	T	SNP	EMR2	ENST00000315576	human	ensembl	74_37	-1	known	nonsense	c.573	p.C191*	0.597	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_GPCR_2_secretin-like,pfam_EGF-like_Ca-bd_dom,pfam_GPS_dom,pfam_EG-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_CD97,prints_GPCR_2_EMR1_rcpt,prints_GPCR_2_secretin-like	-	no_errors	EMR2	HGNC	ENSG00000127507	tier1	-	-	54	0	0.00	27	39	59.09
OBSCN	0	genome.wustl.edu	37	1	228447341	228447341	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	1	228447341	228447341	C	A	SNP	OBSCN	ENST00000570156	human	ensembl	74_37	+1	putative	missense	c.5001	p.S1667R	0.031	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	tier1	-	-	79	0	0.00	48	7	12.73
PTPRZ1	0	genome.wustl.edu	37	7	121568222	121568222	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	7	121568222	121568222	G	T	SNP	PTPRZ1	ENST00000393386	human	ensembl	74_37	+1	known	missense	c.71	p.G24V	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRZ1	HGNC	ENSG00000106278	tier1	-	-	114	1	0.87	29	3	9.38
MT-CO1	0	genome.wustl.edu	37	MT	7306	7306	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	MT	7306	7306	T	C	SNP	MT-CO1	ENST00000361624	human	ensembl	74_37	+1	known	missense	c.1403	p.M468T	NULL	superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom,prints_Cyt_c_Oxase_su1	-	no_errors	MT-CO1	HGNC	ENSG00000198804	tier1	-	-	148	0	0.00	6	54	90.00
LARP6	0	genome.wustl.edu	37	15	71124995	71124995	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	15	71124995	71124995	A	G	SNP	LARP6	ENST00000299213	human	ensembl	74_37	-1	known	missense	c.872	p.I291T	1.000	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd,prints_Lupus_La	-	no_errors	LARP6	HGNC	ENSG00000166173	tier1	-	-	88	0	0.00	69	26	27.37
PPFIA1	0	genome.wustl.edu	37	11	70189796	70189796	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	11	70189796	70189796	G	T	SNP	PPFIA1	ENST00000253925	human	ensembl	74_37	+1	known	missense	c.1729	p.D577Y	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA1	HGNC	ENSG00000131626	tier1	-	-	43	0	0.00	21	11	34.38
MEG3	0	genome.wustl.edu	37	14	101300787	101300787	+	RNA	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	14	101300787	101300787	C	T	SNP	MEG3	ENST00000398461	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MEG3	HGNC	ENSG00000214548	tier1	-	-	78	0	0.00	66	9	12.00
OR7E14P	0	genome.wustl.edu	37	11	17073831	17073831	+	RNA	SNP	T	T	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	11	17073831	17073831	T	C	SNP	OR7E14P	ENST00000530490	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	OR7E14P	HGNC	ENSG00000184669	tier1	-	-	67	0	0.00	51	18	26.09
NDST4	0	genome.wustl.edu	37	4	115997952	115997952	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	4	115997952	115997952	G	A	SNP	NDST4	ENST00000264363	human	ensembl	74_37	-1	known	missense	c.241	p.L81F	0.968	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST4	HGNC	ENSG00000138653	tier1	-	-	94	0	0.00	52	25	32.05
SPIN4	0	genome.wustl.edu	37	X	62570182	62570182	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	X	62570182	62570182	C	T	SNP	SPIN4	ENST00000335144	human	ensembl	74_37	-1	known	missense	c.517	p.D173N	1.000	NULL	pfam_Spin_Ssty	-	no_errors	SPIN4	HGNC	ENSG00000186767	tier1	-	-	44	0	0.00	30	9	23.08
OR51F1	0	genome.wustl.edu	37	11	4790430	4790430	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	11	4790430	4790430	A	G	SNP	OR51F1	ENST00000380383	human	ensembl	74_37	-1	known	missense	c.739	p.F247L	0.829	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51F1	HGNC	ENSG00000188069	tier1	-	-	71	0	0.00	30	5	14.29
ENSG00000222482	0	genome.wustl.edu	37	7	99817680	99817680	+	RNA	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	7	99817680	99817680	G	A	SNP	ENSG00000222482	ENST00000410550	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.002	-	-	-	no_errors	AC005071.1	Clone_based_ensembl_gene	ENSG00000222482	tier1	-	-	50	0	0.00	49	5	9.26
UNC13B	0	genome.wustl.edu	37	9	35386248	35386248	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	9	35386248	35386248	C	G	SNP	UNC13B	ENST00000378496	human	ensembl	74_37	+1	known	missense	c.2805	p.I935M	1.000	pfam_Ca-dep_secretion_activator	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13B	HGNC	ENSG00000198722	tier1	-	-	48	0	0.00	42	5	10.64
USH2A	0	genome.wustl.edu	37	1	215853665	215853665	+	Silent	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	1	215853665	215853665	G	T	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	silent	c.12120	p.R4040	0.809	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	36	0	0.00	20	3	13.04
GOLT1B	0	genome.wustl.edu	37	12	21661451	21661451	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	12	21661451	21661451	G	C	SNP	GOLT1B	ENST00000229314	human	ensembl	74_37	+1	known	missense	c.252	p.L84F	1.000	pfam_Vesicle_transpt_Got1/SFT2	pfam_Vesicle_transpt_Got1/SFT2	-	no_errors	GOLT1B	HGNC	ENSG00000111711	tier1	-	-	99	0	0.00	112	12	9.68
PIK3C2G	0	genome.wustl.edu	37	12	18649044	18649044	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	12	18649044	18649044	A	G	SNP	PIK3C2G	ENST00000538779	human	ensembl	74_37	+1	known	missense	c.2842	p.I948V	0.987	superfamily_Kinase-like_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_Phox,pfam_PI3K_Ras-bd_dom,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,superfamily_Phox,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,smart_Phox,smart_C2_dom,pfscan_Phox,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C2G	HGNC	ENSG00000139144	tier1	-	-	59	0	0.00	63	17	21.25
FAT1	0	genome.wustl.edu	37	4	187557841	187557841	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	4	187557841	187557841	G	T	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	missense	c.3870	p.S1290R	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857	tier1	-	-	48	0	0.00	46	4	8.00
NCALD	0	genome.wustl.edu	37	8	102731522	102731522	+	Silent	SNP	T	T	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	8	102731522	102731522	T	C	SNP	NCALD	ENST00000311028	human	ensembl	74_37	-1	known	silent	c.336	p.G112	0.099	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	NCALD	HGNC	ENSG00000104490	tier1	-	-	33	0	0.00	34	18	34.62
KIAA1804	0	genome.wustl.edu	37	1	233489571	233489571	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	1	233489571	233489571	G	T	SNP	KIAA1804	ENST00000366624	human	ensembl	74_37	+1	known	missense	c.1005	p.W335C	1.000	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MLK4	Uniprot_gn	ENSG00000143674	tier1	-	-	67	0	0.00	34	4	10.53
ATP8B3	0	genome.wustl.edu	37	19	1799764	1799764	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	19	1799764	1799764	A	-	DEL	ATP8B3	ENST00000526092	human	ensembl	74_37	-1	putative	frame_shift_del	c.1575	p.F525fs	0.016	NULL	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom	-	no_errors	ATP8B3	HGNC	ENSG00000130270	tier1			23	0	0.00	18	4	18.18
PCDHB14	0	genome.wustl.edu	37	5	140605261	140605261	+	Silent	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	5	140605261	140605261	C	T	SNP	PCDHB14	ENST00000239449	human	ensembl	74_37	+1	known	silent	c.2184	p.P728	0.014	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB14	HGNC	ENSG00000120327	tier1	-	-	65	0	0.00	23	13	36.11
GPRC5C	0	genome.wustl.edu	37	17	72443158	72443158	+	Silent	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	17	72443158	72443158	G	T	SNP	GPRC5C	ENST00000392627	human	ensembl	74_37	+1	known	silent	c.1452	p.V484	0.924	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPRC5C	HGNC	ENSG00000170412	tier1	-	-	61	0	0.00	56	6	9.68
MYH7B	0	genome.wustl.edu	37	20	33588591	33588591	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	20	33588591	33588591	G	C	SNP	MYH7B	ENST00000262873	human	ensembl	74_37	+1	novel	missense	c.5325	p.Q1775H	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Myosin_S1_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7B	HGNC	ENSG00000078814	tier1	-	-	35	0	0.00	32	32	50.00
OR3A2	0	genome.wustl.edu	37	17	3181658	3181658	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	17	3181658	3181658	G	T	SNP	OR3A2	ENST00000408891	human	ensembl	74_37	-1	known	missense	c.572	p.P191Q	0.018	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR3A2	HGNC	ENSG00000221882	tier1	-	-	49	0	0.00	48	5	9.43
FBN1	0	genome.wustl.edu	37	15	48729275	48729275	+	Splice_Site	SNP	C	C	G			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	15	48729275	48729275	C	G	SNP	FBN1	ENST00000316623	human	ensembl	74_37	-1	known	splice_site	c.6380-1	e52-1	1.000	-	-	-	no_errors	FBN1	HGNC	ENSG00000166147	tier1	-	-	112	0	0.00	62	31	33.33
ZBED4	0	genome.wustl.edu	37	22	50278947	50278948	+	Frame_Shift_Ins	INS	-	-	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	22	50278947	50278948	-	A	INS	ZBED4	ENST00000216268	human	ensembl	74_37	+1	known	frame_shift_ins	c.1637_1638	p.N548fs	0.005:0.000	NULL	pfam_Znf_BED_prd,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED4	HGNC	ENSG00000100426	tier1			56	0	0.00	77	13	14.44
ENSG00000243696	0	genome.wustl.edu	37	3	52864443	52864443	+	RNA	DEL	T	T	-			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	3	52864443	52864443	T	-	DEL	ENSG00000243696	ENST00000513520	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP5-966M1.6	Clone_based_vega_gene	ENSG00000243696	tier1			30	0	0.00	22	2	8.33
DNM1P47	0	genome.wustl.edu	37	15	102304728	102304728	+	RNA	SNP	G	G	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	15	102304728	102304728	G	C	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660	tier1	rs7169413	-	45	0	0.00	53	8	13.11
ISLR2	0	genome.wustl.edu	37	15	74425761	74425761	+	Silent	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	15	74425761	74425761	G	A	SNP	ISLR2	ENST00000361742	human	ensembl	74_37	+1	known	silent	c.666	p.V222	0.746	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Ig-like_dom	-	no_errors	ISLR2	HGNC	ENSG00000167178	tier1	-	-	34	0	0.00	18	4	18.18
TMEM217	0	genome.wustl.edu	37	6	37186447	37186447	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	6	37186447	37186447	G	T	SNP	TMEM217	ENST00000336655	human	ensembl	74_37	-1	known	missense	c.360	p.D120E	0.000	NULL	NULL	-	no_errors	TMEM217	HGNC	ENSG00000172738	tier1	-	-	48	0	0.00	56	11	16.42
FBXO42	0	genome.wustl.edu	37	1	16578257	16578257	+	Silent	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	1	16578257	16578257	G	A	SNP	FBXO42	ENST00000375592	human	ensembl	74_37	-1	known	silent	c.1062	p.F354	1.000	NULL	pfam_Kelch_2,pfam_Kelch_1,pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO42	HGNC	ENSG00000037637	tier1	-	-	21	0	0.00	23	6	20.69
KIR3DL1	0	genome.wustl.edu	37	19	55340890	55340890	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	19	55340890	55340890	C	A	SNP	KIR3DL1	ENST00000391728	human	ensembl	74_37	+1	known	missense	c.1075	p.L359I	0.001	NULL	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR3DL1	HGNC	ENSG00000167633	tier1	-	-	85	0	0.00	48	27	35.53
C5orf42	0	genome.wustl.edu	37	5	37239051	37239051	+	Silent	SNP	T	T	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	5	37239051	37239051	T	A	SNP	C5orf42	ENST00000425232	human	ensembl	74_37	-1	known	silent	c.846	p.V282	0.995	superfamily_Quino_amine_DH_bsu	superfamily_Quino_amine_DH_bsu	-	no_errors	C5orf42	HGNC	ENSG00000197603	tier1	-	-	135	0	0.00	74	16	17.78
ASIC5	0	genome.wustl.edu	37	4	156773430	156773430	+	Silent	SNP	A	A	G			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	4	156773430	156773430	A	G	SNP	ASIC5	ENST00000537611	human	ensembl	74_37	-1	known	silent	c.624	p.F208	1.000	pfam_Na+channel_ASC,prints_Na+channel_ASC	pfam_Na+channel_ASC,prints_Na+channel_ASC	-	no_errors	ASIC5	HGNC	ENSG00000256394	tier1	-	-	151	0	0.00	61	16	20.78
CPSF7	0	genome.wustl.edu	37	11	61183991	61183991	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	11	61183991	61183991	C	A	SNP	CPSF7	ENST00000340437	human	ensembl	74_37	-1	known	missense	c.680	p.G227V	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CPSF7	HGNC	ENSG00000149532	tier1	-	-	40	0	0.00	32	4	11.11
MEOX2	0	genome.wustl.edu	37	7	15725770	15725770	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	7	15725770	15725770	C	G	SNP	MEOX2	ENST00000262041	human	ensembl	74_37	-1	known	missense	c.258	p.Q86H	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	MEOX2	HGNC	ENSG00000106511	tier1	-	-	73	0	0.00	72	14	16.09
TNXB	0	genome.wustl.edu	37	6	32056601	32056601	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	6	32056601	32056601	G	A	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.2740	p.R914W	0.914	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	tier1	-	-	83	0	0.00	59	24	28.57
PLEKHA2	0	genome.wustl.edu	37	8	38827160	38827160	+	Silent	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	8	38827160	38827160	C	T	SNP	PLEKHA2	ENST00000420274	human	ensembl	74_37	+1	known	silent	c.1137	p.F379	0.148	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA2	HGNC	ENSG00000169499	tier1	-	-	99	0	0.00	98	188	65.73
CTBP1-AS2	0	genome.wustl.edu	37	4	1244275	1244275	+	RNA	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	4	1244275	1244275	G	T	SNP	CTBP1-AS2	ENST00000578730	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.022	-	-	-	no_errors	CTBP1-AS2	HGNC	ENSG00000196810	tier1	-	-	28	0	0.00	21	5	19.23
PPAP2B	0	genome.wustl.edu	37	1	56990009	56990009	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	1	56990009	56990009	G	-	DEL	PPAP2B	ENST00000371250	human	ensembl	74_37	-1	known	frame_shift_del	c.515	p.S172fs	0.999	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAP2B	HGNC	ENSG00000162407	tier1			53	0	0.00	9	2	18.18
PPAP2B	0	genome.wustl.edu	37	1	56990011	56990019	+	In_Frame_Del	DEL	GCAGTTGAT	GCAGTTGAT	-			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	GCAGTTGAT	GCAGTTGAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	1	56990011	56990019	GCAGTTGAT	-	DEL	PPAP2B	ENST00000371250	human	ensembl	74_37	-1	known	in_frame_del	c.513_505	p.INC169in_frame_del	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.985	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAP2B	HGNC	ENSG00000162407	tier1			NA	NA	NA	NA	NA	NA
PSPH	0	genome.wustl.edu	37	7	56088848	56088848	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	7	56088848	56088848	C	T	SNP	PSPH	ENST00000275605	human	ensembl	74_37	-1	known	missense	c.58	p.D20N	1.000	pfam_HAD-like_dom,pfam_Pase_PHOSPHO-typ,superfamily_HAD-like_dom,tigrfam_SerB,tigrfam_HAD-SF_hydro_IB_PSP-like	pfam_HAD-like_dom,pfam_Pyrimidine_nucleotidase_eu,pfam_Pase_PHOSPHO-typ,superfamily_HAD-like_dom,tigrfam_SerB,tigrfam_HAD-SF_hydro_IB_PSP-like	-	no_errors	PSPH	HGNC	ENSG00000146733	tier1	-	-	65	0	0.00	155	22	12.43
SGIP1	0	genome.wustl.edu	37	1	67206385	67206385	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	1	67206385	67206385	C	T	SNP	SGIP1	ENST00000237247	human	ensembl	74_37	+1	known	missense	c.2372	p.S791F	1.000	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C	pfam_Muniscin_C-term_mu_dom,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C	-	no_errors	SGIP1	HGNC	ENSG00000118473	tier1	-	-	169	0	0.00	66	40	37.74
CHST14	0	genome.wustl.edu	37	15	40764365	40764365	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	15	40764365	40764365	A	T	SNP	CHST14	ENST00000306243	human	ensembl	74_37	+1	known	missense	c.953	p.H318L	0.115	pfam_Sulfotransferase	pfam_Sulfotransferase	-	no_errors	CHST14	HGNC	ENSG00000169105	tier1	-	-	84	0	0.00	62	14	18.42
MYT1L	0	genome.wustl.edu	37	2	1921033	1921033	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	2	1921033	1921033	T	C	SNP	MYT1L	ENST00000399161	human	ensembl	74_37	-1	known	missense	c.1562	p.Y521C	1.000	pfam_Znf_C2HC	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1L	HGNC	ENSG00000186487	tier1	-	-	75	0	0.00	35	18	33.96
DNAJA3	0	genome.wustl.edu	37	16	4475871	4475871	+	RNA	DEL	C	C	-			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	16	4475871	4475871	C	-	DEL	DNAJA3	ENST00000572974	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	DNAJA3	HGNC	ENSG00000103423	tier1			30	0	0.00	21	3	12.50
LTK	0	genome.wustl.edu	37	15	41797191	41797191	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	15	41797191	41797191	C	T	SNP	LTK	ENST00000263800	human	ensembl	74_37	-1	known	missense	c.1997	p.G666E	0.995	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LTK	HGNC	ENSG00000062524	tier1	-	-	50	0	0.00	39	7	15.22
PKD1	0	genome.wustl.edu	37	16	2156948	2156948	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	16	2156948	2156948	A	C	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	missense	c.7067	p.V2356G	1.000	pfam_PKD/REJ-like,pfscan_REJ-like,tigrfam_Polycystin_cat	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710	tier1	-	-	129	0	0.00	121	17	12.32
OR6C75	0	genome.wustl.edu	37	12	55759298	55759298	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	12	55759298	55759298	G	T	SNP	OR6C75	ENST00000343399	human	ensembl	74_37	+1	known	missense	c.404	p.S135I	0.017	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C75	HGNC	ENSG00000187857	tier1	-	-	31	0	0.00	22	4	15.38
HSP90AA1	0	genome.wustl.edu	37	14	102549597	102549597	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	14	102549597	102549597	C	A	SNP	HSP90AA1	ENST00000334701	human	ensembl	74_37	-1	known	missense	c.1895	p.R632L	1.000	pirsf_Hsp90_fam,pfam_Hsp90_fam,superfamily_Ribosomal_S5_D2-typ_fold	pirsf_Hsp90_fam,pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,prints_Hsp90_N	-	no_errors	HSP90AA1	HGNC	ENSG00000080824	tier1	-	-	91	0	0.00	96	14	12.73
LOC440157	0	genome.wustl.edu	37	14	19686710	19686710	+	RNA	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	14	19686710	19686710	G	A	SNP	LOC440157	ENST00000418499	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.317	-	-	-	no_errors	AL589743.1	Clone_based_vega_gene	ENSG00000225210	tier1	rs113231420	-	28	0	0.00	22	5	18.52
SPAG17	0	genome.wustl.edu	37	1	118509355	118509355	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	1	118509355	118509355	C	T	SNP	SPAG17	ENST00000336338	human	ensembl	74_37	-1	known	missense	c.6409	p.E2137K	0.856	NULL	NULL	-	no_errors	SPAG17	HGNC	ENSG00000155761	tier1	-	-	73	0	0.00	25	6	19.35
ARSD	0	genome.wustl.edu	37	X	2827908	2827908	+	Silent	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	X	2827908	2827908	G	A	SNP	ARSD	ENST00000381154	human	ensembl	74_37	-1	known	silent	c.1248	p.D416	0.992	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSD	HGNC	ENSG00000006756	tier1	-	-	77	0	0.00	65	15	18.75
STAB1	0	genome.wustl.edu	37	3	52550092	52550092	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	3	52550092	52550092	C	A	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	missense	c.3982	p.L1328M	0.168	NULL	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327	tier1	-	-	60	0	0.00	55	5	8.33
NUB1	0	genome.wustl.edu	37	7	151049238	151049238	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	7	151049238	151049238	G	T	SNP	NUB1	ENST00000470316	human	ensembl	74_37	+1	known	missense	c.404	p.G135V	0.000	NULL	NULL	-	no_errors	NUB1	HGNC	ENSG00000013374	tier1	-	-	64	0	0.00	17	8	32.00
DAPK1	0	genome.wustl.edu	37	9	90283512	90283512	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	9	90283512	90283512	G	A	SNP	DAPK1	ENST00000469640	human	ensembl	74_37	+1	known	missense	c.1924	p.D642N	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Prot_kinase_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	DAPK1	HGNC	ENSG00000196730	tier1	-	-	43	0	0.00	26	11	29.73
LOC101928921	0	genome.wustl.edu	37	11	78807973	78807974	+	RNA	INS	-	-	CA			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	11	78807973	78807974	-	CA	INS	LOC101928921	ENST00000526091	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.002	-	-	-	no_errors	CTD-2337I7.1	Clone_based_vega_gene	ENSG00000255345	tier1			8	0	0.00	34	5	12.82
TNRC6C	0	genome.wustl.edu	37	17	76047077	76047077	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	17	76047077	76047077	C	A	SNP	TNRC6C	ENST00000335749	human	ensembl	74_37	+1	known	missense	c.1934	p.T645K	1.000	NULL	pfam_Argonaute_hook_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TNRC6C	HGNC	ENSG00000078687	tier1	-	-	86	0	0.00	106	27	20.30
KIAA0556	0	genome.wustl.edu	37	16	27751449	27751449	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	16	27751449	27751449	G	T	SNP	KIAA0556	ENST00000261588	human	ensembl	74_37	+1	known	missense	c.1831	p.A611S	0.097	NULL	superfamily_Thaumatin	-	no_errors	KIAA0556	HGNC	ENSG00000047578	tier1	-	-	39	0	0.00	40	4	9.09
MKI67	0	genome.wustl.edu	37	10	129901119	129901119	+	Silent	SNP	G	G	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	10	129901119	129901119	G	C	SNP	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	silent	c.8985	p.P2995	0.012	NULL	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773	tier1	-	-	80	0	0.00	44	12	21.43
FIP1L1	0	genome.wustl.edu	37	4	54319248	54319249	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	4	54319248	54319249	AG	-	DEL	FIP1L1	ENST00000337488	human	ensembl	74_37	+1	known	frame_shift_del	c.1447_1448	p.E486fs	0.975:0.991	NULL	pfam_Fip1	-	no_errors	FIP1L1	HGNC	ENSG00000145216	tier1			44	0	0.00	33	4	10.81
PPAP2B	0	genome.wustl.edu	37	1	56990023	56990048	+	Frame_Shift_Del	DEL	GCTGAAATCAGGGTTGCAGACACTCA	GCTGAAATCAGGGTTGCAGACACTCA	-			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	GCTGAAATCAGGGTTGCAGACACTCA	GCTGAAATCAGGGTTGCAGACACTCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	1	56990023	56990048	GCTGAAATCAGGGTTGCAGACACTCA	-	DEL	PPAP2B	ENST00000371250	human	ensembl	74_37	-1	known	frame_shift_del	c.501_476	p.L159fs	0.984:0.982:0.984:1.000:1.000:1.000:0.997:1.000:1.000:0.887:1.000:1.000:1.000:0.999:0.987:1.000:1.000:1.000:1.000:1.000:1.000:0.031:0.353:0.991:0.995:1.000	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAP2B	HGNC	ENSG00000162407	tier1			NA	NA	NA	NA	NA	NA
TSHZ2	0	genome.wustl.edu	37	20	51870078	51870080	+	In_Frame_Del	DEL	AAA	AAA	-			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	20	51870078	51870080	AAA	-	DEL	TSHZ2	ENST00000371497	human	ensembl	74_37	+1	known	in_frame_del	c.81_83	p.K28in_frame_del	0.466:0.989:1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ2	HGNC	ENSG00000182463	tier1			50	0	0.00	67	14	17.28
BMP2K	0	genome.wustl.edu	37	4	79792166	79792166	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	4	79792166	79792166	C	G	SNP	BMP2K	ENST00000335016	human	ensembl	74_37	+1	known	missense	c.1461	p.H487Q	0.883	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BMP2K	HGNC	ENSG00000138756	tier1	rs200441916	-	32	0	0.00	27	5	15.62
OR7E14P	0	genome.wustl.edu	37	11	17073884	17073884	+	RNA	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	11	17073884	17073884	G	A	SNP	OR7E14P	ENST00000530490	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	OR7E14P	HGNC	ENSG00000184669	tier1	-	-	70	0	0.00	59	12	16.90
GRID1	0	genome.wustl.edu	37	10	87482894	87482894	+	Silent	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	10	87482894	87482894	G	A	SNP	GRID1	ENST00000327946	human	ensembl	74_37	-1	known	silent	c.1863	p.G621	0.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID1	HGNC	ENSG00000182771	tier1	-	-	36	0	0.00	19	10	34.48
ANKRD11	0	genome.wustl.edu	37	16	89347362	89347362	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	16	89347362	89347362	T	C	SNP	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	missense	c.5588	p.D1863G	0.085	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522	tier1	-	-	79	0	0.00	38	12	24.00
ZNF37A	0	genome.wustl.edu	37	10	38407196	38407196	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	10	38407196	38407196	C	T	SNP	ZNF37A	ENST00000351773	human	ensembl	74_37	+1	known	missense	c.1117	p.H373Y	0.993	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF37A	HGNC	ENSG00000075407	tier1	-	-	65	0	0.00	24	4	14.29
DNAAF3	0	genome.wustl.edu	37	19	55672542	55672542	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	19	55672542	55672542	A	G	SNP	DNAAF3	ENST00000527223	human	ensembl	74_37	-1	known	missense	c.1007	p.V336A	0.242	NULL	NULL	-	no_errors	DNAAF3	HGNC	ENSG00000167646	tier1	-	-	71	0	0.00	45	37	45.12
PLEKHA6	0	genome.wustl.edu	37	1	204228811	204228811	+	Silent	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	1	204228811	204228811	G	T	SNP	PLEKHA6	ENST00000272203	human	ensembl	74_37	-1	known	silent	c.582	p.P194	0.069	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA6	HGNC	ENSG00000143850	tier1	-	-	36	0	0.00	18	3	14.29
CDK11B	0	genome.wustl.edu	37	1	1576445	1576445	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	1	1576445	1576445	C	T	SNP	CDK11B	ENST00000407249	human	ensembl	74_37	-1	known	missense	c.1048	p.D350N	0.267	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK11B	HGNC	ENSG00000248333	tier1	-	-	31	0	0.00	20	8	28.57
SEPW1	0	genome.wustl.edu	37	19	48283233	48283233	+	RNA	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	19	48283233	48283233	C	T	SNP	SEPW1	ENST00000599302	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SEPW1	HGNC	ENSG00000178980	tier1	-	-	20	0	0.00	14	4	22.22
TEX11	0	genome.wustl.edu	37	X	69830390	69830390	+	Silent	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	X	69830390	69830390	C	T	SNP	TEX11	ENST00000344304	human	ensembl	74_37	-1	known	silent	c.1800	p.K600	0.815	NULL	pfam_Meiosis_specific_SPO22,smart_TPR_repeat	-	no_errors	TEX11	HGNC	ENSG00000120498	tier1	-	-	201	0	0.00	99	24	19.51
DTX4	0	genome.wustl.edu	37	11	58958586	58958586	+	Splice_Site	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	11	58958586	58958586	G	T	SNP	DTX4	ENST00000227451	human	ensembl	74_37	+1	known	splice_site	c.1160-1	e5-1	1.000	-	-	-	no_errors	DTX4	HGNC	ENSG00000110042	tier1	-	-	42	0	0.00	23	4	14.81
EPHA3	0	genome.wustl.edu	37	3	89259017	89259017	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	3	89259017	89259017	A	G	SNP	EPHA3	ENST00000336596	human	ensembl	74_37	+1	known	missense	c.161	p.E54G	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA3	HGNC	ENSG00000044524	tier1	-	-	50	0	0.00	17	8	32.00
MPDZ	0	genome.wustl.edu	37	9	13217183	13217183	+	Silent	SNP	T	T	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	9	13217183	13217183	T	C	SNP	MPDZ	ENST00000319217	human	ensembl	74_37	-1	known	silent	c.1197	p.K399	0.998	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186	tier1	-	-	149	0	0.00	62	24	27.91
TFCP2L1	0	genome.wustl.edu	37	2	121983174	121983174	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	2	121983174	121983174	G	T	SNP	TFCP2L1	ENST00000263707	human	ensembl	74_37	-1	known	missense	c.1357	p.Q453K	1.000	NULL	pfam_CP2,superfamily_SAM/pointed	-	no_errors	TFCP2L1	HGNC	ENSG00000115112	tier1	-	-	64	0	0.00	45	5	9.80
CNTRL	0	genome.wustl.edu	37	9	123912674	123912674	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	9	123912674	123912674	G	A	SNP	CNTRL	ENST00000238341	human	ensembl	74_37	+1	known	missense	c.3876	p.M1292I	0.000	NULL	pfam_Leu-rich_rpt,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	CNTRL	HGNC	ENSG00000119397	tier1	-	-	58	0	0.00	27	20	42.55
ENSG00000204398	0	genome.wustl.edu	37	13	112278380	112278380	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	13	112278380	112278380	A	T	SNP	ENSG00000204398	ENST00000375713	human	ensembl	74_37	+1	putative	missense	c.38	p.K13M	0.000	NULL	NULL	-	no_errors	RP11-65D24.2	Clone_based_vega_gene	ENSG00000204398	tier1	-	-	110	0	0.00	32	30	48.39
KRT6B	0	genome.wustl.edu	37	12	52841672	52841672	+	Silent	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	12	52841672	52841672	C	T	SNP	KRT6B	ENST00000252252	human	ensembl	74_37	-1	known	silent	c.1314	p.K438	1.000	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6B	HGNC	ENSG00000185479	tier1	rs142297644	-	46	0	0.00	43	4	8.33
ENSG00000214105	0	genome.wustl.edu	37	17	77681418	77681418	+	RNA	SNP	G	G	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	17	77681418	77681418	G	C	SNP	ENSG00000214105	ENST00000397549	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2116F7.1	Clone_based_vega_gene	ENSG00000214105	tier1	-	-	91	0	0.00	85	8	8.60
SLC4A7	0	genome.wustl.edu	37	3	27442283	27442283	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	3	27442283	27442283	T	C	SNP	SLC4A7	ENST00000454389	human	ensembl	74_37	-1	known	missense	c.2399	p.N800S	0.000	pfam_HCO3_transpt_C,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A7	HGNC	ENSG00000033867	tier1	rs200933810	GMAF=0.0005	95	0	0.00	53	20	27.40
SCYL1	0	genome.wustl.edu	37	11	65305961	65305961	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	11	65305961	65305961	G	A	SNP	SCYL1	ENST00000270176	human	ensembl	74_37	+1	known	missense	c.2351	p.R784Q	0.840	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,pfscan_Prot_kinase_dom	-	no_errors	SCYL1	HGNC	ENSG00000142186	tier1	-	-	9	0	0.00	16	5	23.81
ZAN	0	genome.wustl.edu	37	7	100359849	100359849	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	7	100359849	100359849	G	A	SNP	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	missense	c.3854	p.G1285D	0.588	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839	tier1	-	-	57	0	0.00	55	5	8.20
KCNK13	0	genome.wustl.edu	37	14	90651110	90651110	+	Silent	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	14	90651110	90651110	C	T	SNP	KCNK13	ENST00000282146	human	ensembl	74_37	+1	known	silent	c.990	p.D330	0.129	NULL	pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl_THIK,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK13	HGNC	ENSG00000152315	tier1	rs139112374	-	87	0	0.00	57	33	36.67
POLE4	0	genome.wustl.edu	37	2	75186521	75186521	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	2	75186521	75186521	A	-	DEL	POLE4	ENST00000483063	human	ensembl	74_37	+1	known	frame_shift_del	c.267	p.R91fs	0.997	pfam_CBFA_NFYB_domain,pfam_Histone_core_D,superfamily_Histone-fold	pfam_CBFA_NFYB_domain,pfam_Histone_core_D,superfamily_Histone-fold	-	no_errors	POLE4	HGNC	ENSG00000115350	tier1			75	0	0.00	64	6	8.57
TRIM38	0	genome.wustl.edu	37	6	25966859	25966859	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	6	25966859	25966859	C	T	SNP	TRIM38	ENST00000349458	human	ensembl	74_37	+1	known	missense	c.109	p.H37Y	0.004	smart_Znf_RING,pfscan_Znf_RING	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM38	HGNC	ENSG00000112343	tier1	-	-	55	0	0.00	55	5	8.33
BCL11A	0	genome.wustl.edu	37	2	60687183	60687183	+	RNA	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	2	60687183	60687183	G	T	SNP	BCL11A	ENST00000477659	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	BCL11A	HGNC	ENSG00000119866	tier1	-	-	62	0	0.00	44	5	10.20
DNAH8	0	genome.wustl.edu	37	6	38690683	38690683	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	6	38690683	38690683	C	T	SNP	DNAH8	ENST00000449981	human	ensembl	74_37	+1	known	missense	c.98	p.A33V	0.003	NULL	pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721	tier1	-	-	41	0	0.00	34	4	10.53
ARHGAP5	0	genome.wustl.edu	37	14	32561296	32561296	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	14	32561296	32561296	T	C	SNP	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	missense	c.1421	p.V474A	1.000	superfamily_FF_domain,smart_FF_domain	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852	tier1	rs200111638	-	160	1	0.62	146	20	12.05
SPATA25	0	genome.wustl.edu	37	20	44515227	44515240	+	Frame_Shift_Del	DEL	CATGTGCCTGCTCC	CATGTGCCTGCTCC	-			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	CATGTGCCTGCTCC	CATGTGCCTGCTCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	20	44515227	44515240	CATGTGCCTGCTCC	-	DEL	SPATA25	ENST00000372519	human	ensembl	74_37	-1	known	frame_shift_del	c.613_600	p.W200fs	0.056:0.000:0.000:0.002:0.000:0.002:0.239:0.643:0.702:0.768:0.616:0.646:0.984:0.996	NULL	NULL	-	no_errors	SPATA25	HGNC	ENSG00000149634	tier1			NA	NA	NA	NA	NA	NA
DGKB	0	genome.wustl.edu	37	7	14647116	14647116	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	7	14647116	14647116	T	A	SNP	DGKB	ENST00000258767	human	ensembl	74_37	-1	known	missense	c.1379	p.Q460L	1.000	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKB	HGNC	ENSG00000136267	tier1	-	-	342	0	0.00	276	29	9.51
ZNF366	0	genome.wustl.edu	37	5	71739997	71739997	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	5	71739997	71739997	G	T	SNP	ZNF366	ENST00000318442	human	ensembl	74_37	-1	known	missense	c.1821	p.D607E	0.777	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF366	HGNC	ENSG00000178175	tier1	-	-	68	0	0.00	46	4	8.00
PPP1R12A	0	genome.wustl.edu	37	12	80199528	80199528	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	12	80199528	80199528	G	A	SNP	PPP1R12A	ENST00000261207	human	ensembl	74_37	-1	known	missense	c.1844	p.A615V	1.000	pirsf_Pase-1_reg_su_12A/B/C_euk	pirsf_Pase-1_reg_su_12A/B/C_euk,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	PPP1R12A	HGNC	ENSG00000058272	tier1	-	-	48	0	0.00	26	11	29.73
LOC653786	0	genome.wustl.edu	37	16	22558362	22558362	+	RNA	SNP	C	C	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	16	22558362	22558362	C	A	SNP	LOC653786	ENST00000550753	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.104	-	-	-	no_errors	RP11-368J21.3	Clone_based_vega_gene	ENSG00000257838	tier1	-	-	90	0	0.00	37	4	9.76
OR51D1	0	genome.wustl.edu	37	11	4661029	4661029	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	11	4661029	4661029	G	T	SNP	OR51D1	ENST00000357605	human	ensembl	74_37	+1	known	missense	c.9	p.K3N	0.067	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51D1	HGNC	ENSG00000197428	tier1	-	-	62	0	0.00	26	19	42.22
DSG2	0	genome.wustl.edu	37	18	29122740	29122740	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	18	29122740	29122740	T	-	DEL	DSG2	ENST00000261590	human	ensembl	74_37	+1	known	frame_shift_del	c.2259	p.S754fs	0.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Desmoglein,prints_Desmosomal_cadherin	-	no_errors	DSG2	HGNC	ENSG00000046604	tier1			55	0	0.00	19	2	9.52
IFT52	0	genome.wustl.edu	37	20	42275733	42275733	+	RNA	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	20	42275733	42275733	G	A	SNP	IFT52	ENST00000461012	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IFT52	HGNC	ENSG00000101052	tier1	-	-	38	0	0.00	43	45	51.14
PLP1	0	genome.wustl.edu	37	X	103041725	103041725	+	RNA	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	X	103041725	103041725	G	A	SNP	PLP1	ENST00000465975	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.103	-	-	-	no_errors	PLP1	HGNC	ENSG00000123560	tier1	-	-	18	0	0.00	7	47	87.04
SCUBE1	0	genome.wustl.edu	37	22	43604213	43604213	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	22	43604213	43604213	T	A	SNP	SCUBE1	ENST00000360835	human	ensembl	74_37	-1	known	missense	c.2599	p.T867S	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_EGF-like_Ca-bd_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	SCUBE1	HGNC	ENSG00000159307	tier1	-	-	33	0	0.00	63	16	20.25
NUP160	0	genome.wustl.edu	37	11	47858526	47858526	+	Silent	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	11	47858526	47858526	G	T	SNP	NUP160	ENST00000378460	human	ensembl	74_37	-1	known	silent	c.855	p.P285	0.839	pfam_Nucleoporin_Nup160	pfam_Nucleoporin_Nup160	-	no_errors	NUP160	HGNC	ENSG00000030066	tier1	-	-	63	0	0.00	42	4	8.70
PTPRU	0	genome.wustl.edu	37	1	29618406	29618406	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	1	29618406	29618406	A	G	SNP	PTPRU	ENST00000345512	human	ensembl	74_37	+1	known	missense	c.2374	p.T792A	0.992	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRU	HGNC	ENSG00000060656	tier1	-	-	62	0	0.00	41	4	8.89
ALG1L	0	genome.wustl.edu	37	3	125652482	125652482	+	Silent	SNP	C	C	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	3	125652482	125652482	C	A	SNP	ALG1L	ENST00000340333	human	ensembl	74_37	-1	known	silent	c.36	p.G12	0.000	NULL	NULL	-	no_errors	ALG1L	HGNC	ENSG00000189366	tier1	-	-	56	0	0.00	45	7	13.46
SLC8B1	0	genome.wustl.edu	37	12	113753242	113753242	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	12	113753242	113753242	C	T	SNP	SLC8B1	ENST00000202831	human	ensembl	74_37	-1	known	missense	c.1033	p.V345M	0.983	NULL	pfam_NaCa_Exmemb	-	no_errors	SLC8B1	HGNC	ENSG00000089060	tier1	-	-	35	0	0.00	22	4	15.38
PKD1L1	0	genome.wustl.edu	37	7	47894630	47894630	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	7	47894630	47894630	C	G	SNP	PKD1L1	ENST00000289672	human	ensembl	74_37	-1	known	missense	c.4709	p.R1570T	0.000	pfscan_REJ-like	pfam_PKD/REJ-like,pfam_PKD1_2_channel,pfam_PKD_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,superfamily_PKD_dom,smart_PKD/Chitinase_dom,smart_PLAT/LH2_dom,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like	-	no_errors	PKD1L1	HGNC	ENSG00000158683	tier1	-	-	109	0	0.00	43	16	27.12
ENSG00000229953	0	genome.wustl.edu	37	1	156616443	156616449	+	RNA	DEL	CCCTGGC	CCCTGGC	-			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	CCCTGGC	CCCTGGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	1	156616443	156616449	CCCTGGC	-	DEL	ENSG00000229953	ENST00000448869	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.040:0.040:0.040:0.039:0.037:0.036:0.008	-	-	-	no_errors	RP11-284F21.7	Clone_based_vega_gene	ENSG00000229953	tier1			NA	NA	NA	NA	NA	NA
ENSG00000249430	0	genome.wustl.edu	37	5	139924	139924	+	RNA	SNP	C	C	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	5	139924	139924	C	A	SNP	ENSG00000249430	ENST00000512035	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTD-2231H16.1	Clone_based_vega_gene	ENSG00000249430	tier1	-	-	25	0	0.00	43	7	14.00
OR2H1	0	genome.wustl.edu	37	6	29429643	29429643	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	6	29429643	29429643	T	A	SNP	OR2H1	ENST00000377132	human	ensembl	74_37	+1	known	missense	c.97	p.Y33N	0.987	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2H1	HGNC	ENSG00000204688	tier1	-	-	74	0	0.00	35	16	31.37
SPTBN5	0	genome.wustl.edu	37	15	42165696	42165696	+	Silent	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	15	42165696	42165696	C	T	SNP	SPTBN5	ENST00000320955	human	ensembl	74_37	-1	known	silent	c.5001	p.K1667	0.997	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877	tier1	-	-	38	0	0.00	33	4	10.81
DLGAP2	0	genome.wustl.edu	37	8	1639774	1639774	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	8	1639774	1639774	G	C	SNP	DLGAP2	ENST00000421627	human	ensembl	74_37	+1	known	missense	c.2538	p.W846C	1.000	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP2	HGNC	ENSG00000198010	tier1	-	-	52	0	0.00	38	16	29.63
ADAM28	0	genome.wustl.edu	37	8	24184147	24184147	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	8	24184147	24184147	A	T	SNP	ADAM28	ENST00000265769	human	ensembl	74_37	+1	known	missense	c.971	p.Q324L	1.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM28	HGNC	ENSG00000042980	tier1	-	-	131	0	0.00	128	12	8.57
GTF2B	0	genome.wustl.edu	37	1	89325834	89325834	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	1	89325834	89325834	G	A	SNP	GTF2B	ENST00000370500	human	ensembl	74_37	-1	known	nonsense	c.394	p.R132*	0.993	pfam_TFIIB_cyclin,pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	pfam_TFIIB_cyclin,pfam_Znf_TFIIB,pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pfscan_Znf_TFIIB,prints_TFIIB	-	no_errors	GTF2B	HGNC	ENSG00000137947	tier1	-	-	69	0	0.00	33	19	36.54
PARD6B	0	genome.wustl.edu	37	20	49366862	49366862	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	20	49366862	49366862	C	T	SNP	PARD6B	ENST00000371610	human	ensembl	74_37	+1	known	missense	c.956	p.S319L	0.991	NULL	pfam_OPR_PB1,pfam_PDZ,superfamily_PDZ,smart_OPR_PB1,smart_PDZ,pfscan_PDZ	-	no_errors	PARD6B	HGNC	ENSG00000124171	tier1	-	-	69	0	0.00	43	28	39.44
HS6ST1	0	genome.wustl.edu	37	2	129075797	129075797	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	2	129075797	129075797	A	C	SNP	HS6ST1	ENST00000259241	human	ensembl	74_37	-1	known	missense	c.341	p.V114G	1.000	pfam_Sulfotransferase,superfamily_P-loop_NTPase	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	HS6ST1	HGNC	ENSG00000136720	tier1	rs199993343	-	29	0	0.00	21	6	22.22
EMX1	0	genome.wustl.edu	37	2	73161038	73161038	+	Silent	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	2	73161038	73161038	G	A	SNP	EMX1	ENST00000258106	human	ensembl	74_37	+1	known	silent	c.828	p.T276	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	EMX1	HGNC	ENSG00000135638	tier1	-	-	62	0	0.00	52	25	32.05
TNPO1	0	genome.wustl.edu	37	5	72184001	72184001	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	5	72184001	72184001	G	T	SNP	TNPO1	ENST00000337273	human	ensembl	74_37	+1	known	missense	c.1400	p.C467F	1.000	pfam_HEAT,superfamily_ARM-type_fold	pfam_HEAT,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	TNPO1	HGNC	ENSG00000083312	tier1	-	-	27	0	0.00	27	4	12.90
SPAG5-AS1	0	genome.wustl.edu	37	17	26925903	26925903	+	RNA	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	17	26925903	26925903	C	T	SNP	SPAG5-AS1	ENST00000414744	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	SPAG5-AS1	HGNC	ENSG00000227543	tier1	-	-	127	0	0.00	82	48	36.92
TNXB	0	genome.wustl.edu	37	6	32063513	32063514	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	6	32063513	32063514	AC	-	DEL	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	frame_shift_del	c.2117_2116	p.V706fs	0.972:0.989	smart_EG-like_dom	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	tier1			34	0	0.00	25	3	10.71
GLA	0	genome.wustl.edu	37	X	100653780	100653780	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	X	100653780	100653780	G	-	DEL	GLA	ENST00000218516	human	ensembl	74_37	-1	known	frame_shift_del	c.794	p.P265fs	1.000	superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_27	pfam_Glyco_hydro_GHD,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_27	-	no_errors	GLA	HGNC	ENSG00000102393	tier1			189	0	0.00	48	29	37.66
GPX8	0	genome.wustl.edu	37	5	54460112	54460113	+	RNA	INS	-	-	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	5	54460112	54460113	-	T	INS	GPX8	ENST00000506123	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	GPX8	HGNC	ENSG00000164294	tier1			23	0	0.00	22	3	12.00
RSU1P2	0	genome.wustl.edu	37	10	45602152	45602152	+	RNA	SNP	G	G	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	10	45602152	45602152	G	C	SNP	RSU1P2	ENST00000423875	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RSU1P2	HGNC	ENSG00000232554	tier1	-	-	109	0	0.00	73	18	19.78
SNX29P2	0	genome.wustl.edu	37	16	29339873	29339873	+	Splice_Site	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	16	29339873	29339873	G	A	SNP	SNX29P2	ENST00000398878	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	1.000	-	-	-	no_errors	SNX29P2	HGNC	ENSG00000198106	tier1	-	-	52	0	0.00	78	11	12.36
EP300	0	genome.wustl.edu	37	22	41513493	41513493	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	22	41513493	41513493	T	G	SNP	EP300	ENST00000263253	human	ensembl	74_37	+1	known	missense	c.397	p.S133A	1.000	NULL	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	EP300	HGNC	ENSG00000100393	tier1	-	-	29	0	0.00	31	6	16.22
CDX2	0	genome.wustl.edu	37	13	28542874	28542874	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	13	28542874	28542874	G	C	SNP	CDX2	ENST00000381020	human	ensembl	74_37	-1	known	missense	c.270	p.N90K	0.875	pfam_Caudal_activation_dom	pfam_Caudal_activation_dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	CDX2	HGNC	ENSG00000165556	tier1	-	-	15	0	0.00	3	5	62.50
PCDHB15	0	genome.wustl.edu	37	5	140625567	140625567	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	5	140625567	140625567	A	G	SNP	PCDHB15	ENST00000231173	human	ensembl	74_37	+1	known	missense	c.421	p.K141E	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB15	HGNC	ENSG00000113248	tier1	-	-	48	0	0.00	22	19	46.34
IQCD	0	genome.wustl.edu	37	12	113645711	113645711	+	Silent	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	12	113645711	113645711	G	T	SNP	IQCD	ENST00000416617	human	ensembl	74_37	-1	known	silent	c.261	p.V87	0.000	NULL	pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCD	HGNC	ENSG00000166578	tier1	-	-	48	0	0.00	43	4	8.51
FASN	0	genome.wustl.edu	37	17	80050656	80050656	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	17	80050656	80050656	G	T	SNP	FASN	ENST00000306749	human	ensembl	74_37	-1	known	missense	c.811	p.Q271K	1.000	pfam_Ketoacyl_synth_C,superfamily_Thiolase-like,smart_PKS_Beta-ketoAc_synthase_dom	pfam_Acyl_transferase,pfam_Ketoacyl_synth_N,pfam_Thioesterase,pfam_PKS_KR,pfam_DH_sc/Rdtase_SDR,pfam_Ketoacyl_synth_C,pfam_ADH_C,pfam_Acyl_carrier_prot-like,pfam_Methyltransf_12,pfam_Methyltransf_11,superfamily_Thiolase-like,superfamily_Acyl_Trfase/lysoPLipase,superfamily_GroES-like,superfamily_Acyl_carrier_prot-like,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_Beta-ketoAc_synthase_dom,smart_PKS_acyl_transferase,smart_PKS_dehydratase,smart_PKS_ER,smart_PKS/FAS_KR,smart_PKS_PP-bd,pfscan_Acyl_carrier_prot-like	-	no_errors	FASN	HGNC	ENSG00000169710	tier1	-	-	90	0	0.00	97	19	16.38
HECTD3	0	genome.wustl.edu	37	1	45469037	45469037	+	RNA	SNP	C	C	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	1	45469037	45469037	C	T	SNP	HECTD3	ENST00000486132	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HECTD3	HGNC	ENSG00000126107	tier1	-	-	25	0	0.00	21	10	32.26
SMC5	0	genome.wustl.edu	37	9	72882851	72882851	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	9	72882851	72882851	G	A	SNP	SMC5	ENST00000361138	human	ensembl	74_37	+1	known	missense	c.340	p.V114M	1.000	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	-	no_errors	SMC5	HGNC	ENSG00000198887	tier1	-	-	125	0	0.00	71	32	31.07
AKAP9	0	genome.wustl.edu	37	7	91641895	91641895	+	Silent	SNP	G	G	A			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	7	91641895	91641895	G	A	SNP	AKAP9	ENST00000359028	human	ensembl	74_37	+1	known	silent	c.3507	p.K1169	1.000	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB	-	no_errors	AKAP9	HGNC	ENSG00000127914	tier1	-	-	72	0	0.00	45	48	51.61
TBL3	0	genome.wustl.edu	37	16	2026921	2026921	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-AB2Q-01A-11D-A38Z-09	TCGA-DX-AB2Q-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2efcaa60-02fc-4a76-b706-d8e466b8a002	550cb351-7d6a-45f1-a370-c8fee525d3a6	16	2026921	2026921	A	T	SNP	TBL3	ENST00000568546	human	ensembl	74_37	+1	known	missense	c.1399	p.I467F	0.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_SSU_processome_Utp13,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TBL3	HGNC	ENSG00000183751	tier1	-	-	46	0	0.00	26	21	44.68
