Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
UPF2	0	genome.wustl.edu	37	10	11990442	11990442	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	10	11990442	11990442	C	G	SNP	UPF2	ENST00000356352	human	ensembl	74_37	-1	known	missense	c.3100	p.E1034Q	1.000	NULL	pfam_MIF4G-like_typ-3,pfam_Up-fram_suppressor-2,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	-	no_errors	UPF2	HGNC	ENSG00000151461	tier1	-	-	40	0	0.00	49	9	15.52
DNAH11	0	genome.wustl.edu	37	7	21628211	21628211	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	7	21628211	21628211	C	T	SNP	DNAH11	ENST00000328843	human	ensembl	74_37	+1	known	nonsense	c.1930	p.R644*	0.978	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH11	HGNC	ENSG00000105877	tier1	-	-	38	0	0.00	26	11	29.73
SHROOM3	0	genome.wustl.edu	37	4	77700031	77700031	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	4	77700031	77700031	C	A	SNP	SHROOM3	ENST00000296043	human	ensembl	74_37	+1	known	missense	c.5692	p.L1898M	1.000	pfam_ASD2	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771	tier1	-	-	58	0	0.00	33	15	31.25
IRS4	0	genome.wustl.edu	37	X	107976496	107976496	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	X	107976496	107976496	G	T	SNP	IRS4	ENST00000372129	human	ensembl	74_37	-1	known	missense	c.3079	p.P1027T	0.976	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS4	HGNC	ENSG00000133124	tier1	-	-	61	0	0.00	19	12	38.71
SCN11A	0	genome.wustl.edu	37	3	38991680	38991680	+	Silent	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	38991680	38991680	G	T	SNP	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	silent	c.174	p.A58	0.427	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356	tier1	-	-	52	0	0.00	68	8	10.53
COIL	0	genome.wustl.edu	37	17	55016500	55016500	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	17	55016500	55016500	T	C	SNP	COIL	ENST00000240316	human	ensembl	74_37	-1	known	missense	c.1663	p.K555E	1.000	NULL	NULL	-	no_errors	COIL	HGNC	ENSG00000121058	tier1	-	-	35	0	0.00	31	17	35.42
FAM74A3	0	genome.wustl.edu	37	9	40716018	40716018	+	RNA	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	9	40716018	40716018	G	T	SNP	FAM74A3	ENST00000355345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.650	-	-	-	no_errors	FAM74A3	HGNC	ENSG00000204844	tier1	-	-	312	1	0.32	344	48	12.24
SLC9A5	0	genome.wustl.edu	37	16	67300017	67300019	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	16	67300017	67300019	GAG	-	DEL	SLC9A5	ENST00000299798	human	ensembl	74_37	+1	known	in_frame_del	c.2107_2109	p.E706in_frame_del	1.000:1.000:1.000	NULL	pfam_Cation/H_exchanger,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A5	HGNC	ENSG00000135740	tier1			35	0	0.00	42	5	10.64
BACE1	0	genome.wustl.edu	37	11	117161674	117161674	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	11	117161674	117161674	G	A	SNP	BACE1	ENST00000313005	human	ensembl	74_37	-1	known	missense	c.1034	p.S345L	1.000	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom,prints_Pept_A1_BACE,prints_Pept_A1_BACE1,prints_Aspartic_peptidase	-	no_errors	BACE1	HGNC	ENSG00000186318	tier1	-	-	37	0	0.00	25	20	44.44
BTBD17	0	genome.wustl.edu	37	17	72352937	72352937	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	17	72352937	72352937	G	C	SNP	BTBD17	ENST00000375366	human	ensembl	74_37	-1	known	missense	c.1296	p.H432Q	1.000	NULL	pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD17	HGNC	ENSG00000204347	tier1	-	-	41	0	0.00	17	9	34.62
TRPV3	0	genome.wustl.edu	37	17	3447913	3447913	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	17	3447913	3447913	C	T	SNP	TRPV3	ENST00000301365	human	ensembl	74_37	-1	known	missense	c.271	p.D91N	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel	-	no_errors	TRPV3	HGNC	ENSG00000167723	tier1	-	-	60	0	0.00	70	14	16.47
NDUFV2	0	genome.wustl.edu	37	18	9122591	9122591	+	Silent	SNP	T	T	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	18	9122591	9122591	T	C	SNP	NDUFV2	ENST00000318388	human	ensembl	74_37	+1	known	silent	c.381	p.V127	1.000	pfam_NuoE_like,superfamily_Thioredoxin-like_fold,tigrfam_NuoE_like	pfam_NuoE_like,superfamily_Thioredoxin-like_fold,tigrfam_NuoE_like	-	no_errors	NDUFV2	HGNC	ENSG00000178127	tier1	rs76552443	-	107	0	0.00	128	21	14.09
PLCXD1	0	genome.wustl.edu	37	X	215829	215829	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	X	215829	215829	G	A	SNP	PLCXD1	ENST00000381657	human	ensembl	74_37	+1	known	missense	c.799	p.E267K	0.880	superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom	-	no_errors	PLCXD1	HGNC	ENSG00000182378	tier1	-	-	125	0	0.00	102	33	24.44
VAT1L	0	genome.wustl.edu	37	16	77822609	77822609	+	Silent	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	16	77822609	77822609	G	A	SNP	VAT1L	ENST00000302536	human	ensembl	74_37	+1	known	silent	c.30	p.E10	1.000	NULL	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like,smart_PKS_ER	-	no_errors	VAT1L	HGNC	ENSG00000171724	tier1	-	-	32	0	0.00	18	21	53.85
TNK2	0	genome.wustl.edu	37	3	195609097	195609097	+	Nonsense_Mutation	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	195609097	195609097	C	A	SNP	TNK2	ENST00000381916	human	ensembl	74_37	-1	known	nonsense	c.901	p.E301*	0.998	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Cdc42_binding_dom_like,pfam_Inhibitor_Mig-6,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_SAM/pointed,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SH3_domain,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	TNK2	HGNC	ENSG00000061938	tier1	-	-	52	0	0.00	37	7	15.91
VPS13C	0	genome.wustl.edu	37	15	62273609	62273609	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	15	62273609	62273609	C	G	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	missense	c.2098	p.V700L	0.982	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	tier1	-	-	135	1	0.73	197	21	9.63
IL17RE	0	genome.wustl.edu	37	3	9944676	9944676	+	Silent	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	9944676	9944676	C	G	SNP	IL17RE	ENST00000421412	human	ensembl	74_37	+1	known	silent	c.159	p.L53	0.028	NULL	pfam_SEFIR	-	no_errors	IL17RE	HGNC	ENSG00000163701	tier1	-	-	61	0	0.00	43	45	51.14
THSD7A	0	genome.wustl.edu	37	7	11485924	11485924	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	7	11485924	11485924	T	A	SNP	THSD7A	ENST00000423059	human	ensembl	74_37	-1	known	missense	c.2828	p.K943I	1.000	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7A	HGNC	ENSG00000005108	tier1	-	-	49	0	0.00	52	12	18.75
OR5H14	0	genome.wustl.edu	37	3	97868995	97868995	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	97868995	97868995	G	T	SNP	OR5H14	ENST00000437310	human	ensembl	74_37	+1	known	missense	c.766	p.A256S	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5H14	HGNC	ENSG00000236032	tier1	-	-	47	0	0.00	14	11	44.00
ENSG00000234978	0	genome.wustl.edu	37	1	142803281	142803281	+	RNA	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	1	142803281	142803281	C	A	SNP	ENSG00000234978	ENST00000423385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	RP11-423O2.5	Clone_based_vega_gene	ENSG00000234978	tier1	rs76943323	-	162	1	0.61	122	11	8.21
BMS1P8	0	genome.wustl.edu	37	16	33497291	33497291	+	RNA	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	16	33497291	33497291	G	A	SNP	BMS1P8	ENST00000565156	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.227	-	-	-	no_errors	BMS1P8	HGNC	ENSG00000260518	tier1	rs201348007	-	61	0	0.00	40	6	13.04
VPS13C	0	genome.wustl.edu	37	15	62273582	62273582	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	15	62273582	62273582	C	T	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	missense	c.2125	p.E709K	0.995	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	tier1	-	-	135	0	0.00	186	17	8.37
LRRC36	0	genome.wustl.edu	37	16	67410716	67410716	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	16	67410716	67410716	G	A	SNP	LRRC36	ENST00000329956	human	ensembl	74_37	+1	known	missense	c.1747	p.A583T	0.933	NULL	NULL	-	no_errors	LRRC36	HGNC	ENSG00000159708	tier1	-	-	59	0	0.00	42	4	8.70
BAZ2B	0	genome.wustl.edu	37	2	160261574	160261574	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	2	160261574	160261574	T	G	SNP	BAZ2B	ENST00000392783	human	ensembl	74_37	-1	known	missense	c.2729	p.Q910P	1.000	NULL	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_dom,superfamily_Znf_FYVE_PHD,superfamily_ARM-type_fold,smart_Methyl_CpG_DNA-bd,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2B	HGNC	ENSG00000123636	tier1	-	-	83	0	0.00	89	30	25.21
OSBPL11	0	genome.wustl.edu	37	3	125313565	125313565	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	125313565	125313565	G	T	SNP	OSBPL11	ENST00000296220	human	ensembl	74_37	-1	known	missense	c.80	p.T27N	1.000	NULL	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL11	HGNC	ENSG00000144909	tier1	-	-	28	0	0.00	15	4	21.05
RHOBTB1	0	genome.wustl.edu	37	10	62648444	62648444	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	10	62648444	62648444	C	T	SNP	RHOBTB1	ENST00000337910	human	ensembl	74_37	-1	known	missense	c.982	p.D328N	0.993	superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,superfamily_BTB/POZ_fold,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_BTB/POZ-like,pfscan_BTB/POZ-like,prints_Small_GTPase	-	no_errors	RHOBTB1	HGNC	ENSG00000072422	tier1	-	-	48	0	0.00	22	10	31.25
SYT6	0	genome.wustl.edu	37	1	114682308	114682308	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	1	114682308	114682308	C	T	SNP	SYT6	ENST00000393296	human	ensembl	74_37	-1	known	missense	c.441	p.M147I	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_dom	-	no_errors	SYT6	HGNC	ENSG00000134207	tier1	-	-	23	0	0.00	26	18	40.91
MORN3	0	genome.wustl.edu	37	12	122091053	122091053	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	12	122091053	122091053	C	T	SNP	MORN3	ENST00000355329	human	ensembl	74_37	-1	known	missense	c.576	p.M192I	0.943	NULL	pfam_MORN,smart_MORN	-	no_errors	MORN3	HGNC	ENSG00000139714	tier1	-	-	94	0	0.00	63	28	30.43
PRTG	0	genome.wustl.edu	37	15	55912283	55912283	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	15	55912283	55912283	C	A	SNP	PRTG	ENST00000389286	human	ensembl	74_37	-1	known	missense	c.3380	p.G1127V	1.000	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	PRTG	HGNC	ENSG00000166450	tier1	-	-	65	0	0.00	94	16	14.55
IFNA14	0	genome.wustl.edu	37	9	21239675	21239675	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	9	21239675	21239675	G	A	SNP	IFNA14	ENST00000380222	human	ensembl	74_37	-1	known	missense	c.260	p.T87I	0.178	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNA14	HGNC	ENSG00000228083	tier1	-	-	125	0	0.00	48	35	42.17
ARHGAP21	0	genome.wustl.edu	37	10	24909075	24909075	+	Silent	SNP	A	A	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	10	24909075	24909075	A	G	SNP	ARHGAP21	ENST00000396432	human	ensembl	74_37	-1	known	silent	c.1749	p.F583	0.995	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP21	HGNC	ENSG00000107863	tier1	-	-	81	0	0.00	83	10	10.75
ADAMTS15	0	genome.wustl.edu	37	11	130319097	130319097	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	11	130319097	130319097	C	-	DEL	ADAMTS15	ENST00000299164	human	ensembl	74_37	+1	known	frame_shift_del	c.229	p.A78fs	1.000	pfam_Peptidase_M12B_N	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS,prints_Pept_M12B_ADAM-TS8	-	no_errors	ADAMTS15	HGNC	ENSG00000166106	tier1			35	0	0.00	10	2	16.67
SLC7A14	0	genome.wustl.edu	37	3	170201202	170201202	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	170201202	170201202	G	T	SNP	SLC7A14	ENST00000231706	human	ensembl	74_37	-1	known	missense	c.1016	p.A339D	1.000	pfam_AA-permease/SLC12A_dom	pfam_AA-permease/SLC12A_dom	-	no_errors	SLC7A14	HGNC	ENSG00000013293	tier1	-	-	52	0	0.00	69	19	21.59
MRGPRE	0	genome.wustl.edu	37	11	3249728	3249728	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	11	3249728	3249728	G	C	SNP	MRGPRE	ENST00000389832	human	ensembl	74_37	-1	known	missense	c.302	p.T101R	0.002	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	MRGPRE	HGNC	ENSG00000184350	tier1	-	-	19	0	0.00	25	7	21.88
MAST1	0	genome.wustl.edu	37	19	12977542	12977542	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	19	12977542	12977542	G	A	SNP	MAST1	ENST00000251472	human	ensembl	74_37	+1	known	missense	c.2105	p.R702H	1.000	superfamily_Kinase-like_dom	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST1	HGNC	ENSG00000105613	tier1	-	-	9	0	0.00	10	4	28.57
ZNF354A	0	genome.wustl.edu	37	5	178139541	178139541	+	Silent	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	5	178139541	178139541	G	A	SNP	ZNF354A	ENST00000335815	human	ensembl	74_37	-1	known	silent	c.1338	p.A446	0.943	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF354A	HGNC	ENSG00000169131	tier1	-	-	56	0	0.00	42	5	10.64
INPP5A	0	genome.wustl.edu	37	10	134563094	134563094	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	10	134563094	134563094	G	T	SNP	INPP5A	ENST00000368594	human	ensembl	74_37	+1	known	missense	c.806	p.R269L	1.000	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	-	no_errors	INPP5A	HGNC	ENSG00000068383	tier1	-	-	34	0	0.00	20	11	35.48
SPHKAP	0	genome.wustl.edu	37	2	228882458	228882458	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	2	228882458	228882458	A	C	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	missense	c.3112	p.F1038V	0.997	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	tier1	-	-	50	0	0.00	18	3	14.29
MAMDC4	0	genome.wustl.edu	37	9	139755014	139755014	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	9	139755014	139755014	G	T	SNP	MAMDC4	ENST00000445819	human	ensembl	74_37	+1	known	missense	c.3610	p.D1204Y	0.656	NULL	pfam_MAM_dom,pfam_LDrepeatLR_classA_rpt,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_MAM_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	MAMDC4	HGNC	ENSG00000177943	tier1	-	-	38	0	0.00	34	4	10.53
SLCO1B1	0	genome.wustl.edu	37	12	21349882	21349882	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	12	21349882	21349882	A	T	SNP	SLCO1B1	ENST00000256958	human	ensembl	74_37	+1	known	missense	c.730	p.T244S	0.007	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1B1	HGNC	ENSG00000134538	tier1	-	-	54	0	0.00	131	90	40.72
NAALAD2	0	genome.wustl.edu	37	11	89924822	89924822	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	11	89924822	89924822	C	T	SNP	NAALAD2	ENST00000375944	human	ensembl	74_37	+1	novel	missense	c.893	p.T298I	0.991	NULL	pfam_Protease-assoc_domain	-	no_errors	NAALAD2	HGNC	ENSG00000077616	tier1	-	-	74	0	0.00	77	19	19.79
NAALAD2	0	genome.wustl.edu	37	11	89924884	89924884	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	11	89924884	89924884	C	T	SNP	NAALAD2	ENST00000534061	human	ensembl	74_37	+1	known	missense	c.2192	p.A731V	1.000	pfam_TFR-like_dimer_dom,superfamily_TFR-like_dimer_dom	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	NAALAD2	HGNC	ENSG00000077616	tier1	-	-	100	0	0.00	115	18	13.53
ENSG00000259180	0	genome.wustl.edu	37	15	55972661	55972661	+	RNA	DEL	T	T	-			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	15	55972661	55972661	T	-	DEL	ENSG00000259180	ENST00000561155	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-420M1.2	Clone_based_vega_gene	ENSG00000259180	tier1			39	0	0.00	49	9	15.52
CYFIP2	0	genome.wustl.edu	37	5	156757766	156757766	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	5	156757766	156757766	C	T	SNP	CYFIP2	ENST00000318218	human	ensembl	74_37	+1	known	missense	c.2248	p.R750C	1.000	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	-	no_errors	CYFIP2	HGNC	ENSG00000055163	tier1	-	-	86	0	0.00	70	25	26.32
ANKDD1A	0	genome.wustl.edu	37	15	65219154	65219154	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	15	65219154	65219154	G	A	SNP	ANKDD1A	ENST00000380230	human	ensembl	74_37	+1	known	missense	c.526	p.D176N	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,prints_Ankyrin_rpt	-	no_errors	ANKDD1A	HGNC	ENSG00000166839	tier1	-	-	23	0	0.00	36	10	21.74
PALM2-AKAP2	0	genome.wustl.edu	37	9	112694185	112694206	+	Splice_Site	DEL	ATTCCCTGTTCTCTGCTACCAG	ATTCCCTGTTCTCTGCTACCAG	-			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	ATTCCCTGTTCTCTGCTACCAG	ATTCCCTGTTCTCTGCTACCAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	9	112694185	112694206	ATTCCCTGTTCTCTGCTACCAG	-	DEL	PALM2-AKAP2	ENST00000374530	human	ensembl	74_37	+1	known	splice_site_del	c.395-22_395-1	e6-1	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	-	-	-	no_errors	PALM2-AKAP2	HGNC	ENSG00000157654	tier1			NA	NA	NA	NA	NA	NA
ARPC5	0	genome.wustl.edu	37	1	183596016	183596016	+	RNA	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	1	183596016	183596016	G	T	SNP	ARPC5	ENST00000462965	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	ARPC5	HGNC	ENSG00000162704	tier1	-	-	19	0	0.00	9	3	25.00
OR5F1	0	genome.wustl.edu	37	11	55761685	55761685	+	Silent	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	11	55761685	55761685	G	T	SNP	OR5F1	ENST00000278409	human	ensembl	74_37	-1	known	silent	c.417	p.T139	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5F1	HGNC	ENSG00000149133	tier1	rs201523946	-	59	0	0.00	51	13	20.31
ZNF850	0	genome.wustl.edu	37	19	37239096	37239096	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	19	37239096	37239096	C	G	SNP	ZNF850	ENST00000591344	human	ensembl	74_37	-1	known	missense	c.2846	p.G949A	0.161	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF850	HGNC	ENSG00000267041	tier1	-	-	47	0	0.00	33	12	26.67
TANGO6	0	genome.wustl.edu	37	16	68961693	68961693	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	16	68961693	68961693	C	T	SNP	TANGO6	ENST00000261778	human	ensembl	74_37	+1	known	missense	c.2350	p.H784Y	0.000	pfam_DUF2435,superfamily_ARM-type_fold	pfam_DUF2435,pfam_DUF2411,superfamily_ARM-type_fold	-	no_errors	TANGO6	HGNC	ENSG00000103047	tier1	-	-	30	0	0.00	13	31	70.45
C6orf165	0	genome.wustl.edu	37	6	88173930	88173930	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	6	88173930	88173930	G	T	SNP	C6orf165	ENST00000369562	human	ensembl	74_37	+1	known	missense	c.1831	p.V611F	0.311	NULL	pfam_DUF3508	-	no_errors	C6ORF165	Uniprot_gn	ENSG00000272514	tier1	-	-	41	0	0.00	23	10	30.30
UVRAG	0	genome.wustl.edu	37	11	75590941	75590941	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	11	75590941	75590941	C	T	SNP	UVRAG	ENST00000356136	human	ensembl	74_37	+1	known	missense	c.289	p.L97F	1.000	smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	UVRAG	HGNC	ENSG00000198382	tier1	-	-	126	0	0.00	116	45	27.95
UGT2B17	0	genome.wustl.edu	37	4	69431379	69431379	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	4	69431379	69431379	A	T	SNP	UGT2B17	ENST00000317746	human	ensembl	74_37	-1	known	missense	c.784	p.Y262N	1.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2B17	HGNC	ENSG00000197888	tier1	-	-	75	0	0.00	29	45	60.81
GNL3	0	genome.wustl.edu	37	3	52727821	52727821	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	52727821	52727821	G	T	SNP	GNL3	ENST00000418458	human	ensembl	74_37	+1	known	missense	c.1498	p.D500Y	0.000	NULL	pfam_Gnl3_N_dom,pfam_GTP_binding_domain,superfamily_P-loop_NTPase	-	no_errors	GNL3	HGNC	ENSG00000163938	tier1	-	-	52	0	0.00	51	5	8.93
FAM205B	0	genome.wustl.edu	37	9	34835569	34835569	+	RNA	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	9	34835569	34835569	G	T	SNP	FAM205B	ENST00000455647	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM205B	HGNC	ENSG00000257198	tier1	-	-	74	0	0.00	91	21	18.75
TENM2	0	genome.wustl.edu	37	5	167642246	167642246	+	Silent	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	5	167642246	167642246	G	A	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	silent	c.4047	p.K1349	1.000	superfamily_ConA-like_lec_gl_sf	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934	tier1	-	-	48	0	0.00	27	17	38.64
SLC39A7	0	genome.wustl.edu	37	6	33170365	33170365	+	Silent	SNP	A	A	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	6	33170365	33170365	A	G	SNP	SLC39A7	ENST00000374675	human	ensembl	74_37	+1	known	silent	c.828	p.S276	1.000	pfam_ZIP	pfam_ZIP,prints_Kininogen	-	no_errors	SLC39A7	HGNC	ENSG00000112473	tier1	-	-	17	0	0.00	15	4	21.05
ENSG00000259648	0	genome.wustl.edu	37	14	68082933	68082934	+	RNA	INS	-	-	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	14	68082933	68082934	-	T	INS	ENSG00000259648	ENST00000559968	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998:0.999	-	-	-	no_errors	RP11-643G16.4	Clone_based_vega_gene	ENSG00000259648	tier1			15	0	0.00	6	5	45.45
FANCC	0	genome.wustl.edu	37	9	97869348	97869348	+	Silent	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	9	97869348	97869348	C	A	SNP	FANCC	ENST00000289081	human	ensembl	74_37	-1	known	silent	c.1533	p.L511	0.012	pfam_Fanconi,pirsf_Fanconi	pfam_Fanconi,pirsf_Fanconi,prints_Fanconi	-	no_errors	FANCC	HGNC	ENSG00000158169	tier1	-	-	43	0	0.00	42	7	14.29
SEMG1	0	genome.wustl.edu	37	20	43836660	43836660	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	20	43836660	43836660	C	T	SNP	SEMG1	ENST00000372781	human	ensembl	74_37	+1	known	missense	c.722	p.A241V	0.000	pfam_Semenogelin	pfam_Semenogelin	-	no_errors	SEMG1	HGNC	ENSG00000124233	tier1	-	-	73	0	0.00	72	34	32.08
VWF	0	genome.wustl.edu	37	12	6085362	6085362	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	12	6085362	6085362	C	A	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	missense	c.7352	p.C2451F	1.000	pirsf_VWF,pfam_VWF_C,smart_VWF_C,pfscan_VWF_C	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799	tier1	-	-	31	0	0.00	30	14	31.82
LCT	0	genome.wustl.edu	37	2	136567385	136567385	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	2	136567385	136567385	C	A	SNP	LCT	ENST00000264162	human	ensembl	74_37	-1	known	missense	c.2532	p.K844N	0.977	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850	tier1	-	-	37	0	0.00	79	9	10.23
CTPS2	0	genome.wustl.edu	37	X	16609020	16609020	+	RNA	DEL	A	A	-			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	X	16609020	16609020	A	-	DEL	CTPS2	ENST00000483053	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTPS2	HGNC	ENSG00000047230	tier1			53	0	0.00	26	9	25.71
RAB2A	0	genome.wustl.edu	37	8	61504448	61504448	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	8	61504448	61504448	G	C	SNP	RAB2A	ENST00000262646	human	ensembl	74_37	+1	known	missense	c.394	p.E132Q	1.000	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB2A	HGNC	ENSG00000104388	tier1	-	-	97	0	0.00	107	16	13.01
EPO	0	genome.wustl.edu	37	7	100320681	100320681	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	7	100320681	100320681	C	A	SNP	EPO	ENST00000252723	human	ensembl	74_37	+1	known	missense	c.507	p.F169L	1.000	pfam_EPO_TPO,superfamily_4_helix_cytokine-like_core,pirsf_Erythroptn,prints_Erythroptn	pfam_EPO_TPO,superfamily_4_helix_cytokine-like_core,pirsf_Erythroptn,prints_Erythroptn	-	no_errors	EPO	HGNC	ENSG00000130427	tier1	-	-	19	0	0.00	29	6	17.14
ABCB5	0	genome.wustl.edu	37	7	20795117	20795117	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	7	20795117	20795117	C	G	SNP	ABCB5	ENST00000258738	human	ensembl	74_37	+1	known	missense	c.2309	p.S770C	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB5	HGNC	ENSG00000004846	tier1	-	-	44	0	0.00	58	13	18.31
LOC399829	0	genome.wustl.edu	37	10	134787952	134787952	+	RNA	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	10	134787952	134787952	C	A	SNP	LOC399829	ENST00000461291	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP13-137A17.6	Clone_based_vega_gene	ENSG00000240707	tier1	-	-	17	0	0.00	7	13	65.00
RPF2	0	genome.wustl.edu	37	6	111310221	111310221	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	6	111310221	111310221	T	C	SNP	RPF2	ENST00000368864	human	ensembl	74_37	+1	known	missense	c.187	p.C63R	0.999	NULL	NULL	-	no_errors	RPF2	HGNC	ENSG00000197498	tier1	-	-	84	0	0.00	61	22	26.51
KLHL6	0	genome.wustl.edu	37	3	183211909	183211909	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	183211909	183211909	G	T	SNP	KLHL6	ENST00000341319	human	ensembl	74_37	-1	known	missense	c.1308	p.N436K	1.000	pfam_Kelch_1,pfam_Kelch_2,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL6	HGNC	ENSG00000172578	tier1	-	-	45	0	0.00	62	11	15.07
CACNA1B	0	genome.wustl.edu	37	9	141000214	141000214	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	9	141000214	141000214	C	A	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	missense	c.5386	p.L1796M	0.974	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408	tier1	-	-	30	0	0.00	17	12	41.38
RB1CC1	0	genome.wustl.edu	37	8	53586817	53586817	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	8	53586817	53586817	G	T	SNP	RB1CC1	ENST00000025008	human	ensembl	74_37	-1	known	nonsense	c.590	p.S197*	1.000	NULL	pfam_Autophagy-rel_p11	-	no_errors	RB1CC1	HGNC	ENSG00000023287	tier1	-	-	51	0	0.00	43	4	8.51
MYH7B	0	genome.wustl.edu	37	20	33582077	33582077	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	20	33582077	33582077	C	G	SNP	MYH7B	ENST00000262873	human	ensembl	74_37	+1	novel	missense	c.2699	p.A900G	0.082	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Myosin_S1_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7B	HGNC	ENSG00000078814	tier1	-	-	28	0	0.00	39	10	20.41
EFNB3	0	genome.wustl.edu	37	17	7611316	7611316	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	17	7611316	7611316	G	C	SNP	EFNB3	ENST00000226091	human	ensembl	74_37	+1	known	missense	c.163	p.G55R	1.000	pfam_Ephrin,superfamily_Cupredoxin,prints_Ephrin	pfam_Ephrin,superfamily_Cupredoxin,prints_Ephrin	-	no_errors	EFNB3	HGNC	ENSG00000108947	tier1	-	-	88	0	0.00	90	9	9.09
LOC101929948	0	genome.wustl.edu	37	14	19563586	19563586	+	RNA	SNP	T	T	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	14	19563586	19563586	T	C	SNP	LOC101929948	ENST00000548748	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	CTD-2311B13.5	Clone_based_vega_gene	ENSG00000258252	tier1	-	-	178	0	0.00	109	43	28.29
FGF9	0	genome.wustl.edu	37	13	22275847	22275848	+	RNA	DEL	TA	TA	-			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	13	22275847	22275848	TA	-	DEL	FGF9	ENST00000478546	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.004	-	-	-	no_errors	FGF9	HGNC	ENSG00000102678	tier1			13	0	0.00	12	5	29.41
EMILIN3	0	genome.wustl.edu	37	20	39991664	39991664	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	20	39991664	39991664	C	T	SNP	EMILIN3	ENST00000332312	human	ensembl	74_37	-1	known	missense	c.545	p.R182Q	1.000	NULL	pfam_EMI_domain,pfscan_EMI_domain	-	no_errors	EMILIN3	HGNC	ENSG00000183798	tier1	-	-	38	0	0.00	43	7	14.00
RABGAP1	0	genome.wustl.edu	37	9	125832664	125832664	+	Silent	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	9	125832664	125832664	C	T	SNP	RABGAP1	ENST00000373647	human	ensembl	74_37	+1	known	silent	c.1944	p.C648	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_Kinesin-like,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	RABGAP1	HGNC	ENSG00000011454	tier1	-	-	47	0	0.00	41	4	8.89
ASPH	0	genome.wustl.edu	37	8	62538820	62538820	+	RNA	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	8	62538820	62538820	C	G	SNP	ASPH	ENST00000519678	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ASPH	HGNC	ENSG00000198363	tier1	-	-	96	0	0.00	117	25	17.61
HTR2C	0	genome.wustl.edu	37	X	113965856	113965856	+	Silent	SNP	A	A	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	X	113965856	113965856	A	T	SNP	HTR2C	ENST00000276198	human	ensembl	74_37	+1	known	silent	c.189	p.I63	0.937	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT2C_rcpt,prints_GPCR_Rhodpsn,prints_5HT_rcpt	-	no_errors	HTR2C	HGNC	ENSG00000147246	tier1	-	-	94	0	0.00	25	17	40.48
GLIS1	0	genome.wustl.edu	37	1	53986384	53986384	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	1	53986384	53986384	T	C	SNP	GLIS1	ENST00000312233	human	ensembl	74_37	-1	known	missense	c.1124	p.Q375R	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLIS1	HGNC	ENSG00000174332	tier1	-	-	42	0	0.00	38	23	37.70
OR51H1P	0	genome.wustl.edu	37	11	4881147	4881147	+	Silent	SNP	A	A	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	11	4881147	4881147	A	G	SNP	OR51H1P	ENST00000322059	human	ensembl	74_37	-1	putative	silent	c.648	p.T216	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51H1P	HGNC	ENSG00000176904	tier1	-	-	29	0	0.00	31	5	13.89
FANCC	0	genome.wustl.edu	37	9	97869347	97869347	+	Splice_Site	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	9	97869347	97869347	C	A	SNP	FANCC	ENST00000289081	human	ensembl	74_37	-1	known	splice_site	c.1533+1	e13+1	0.986	-	-	-	no_errors	FANCC	HGNC	ENSG00000158169	tier1	-	-	43	0	0.00	40	7	14.89
PPP2R2A	0	genome.wustl.edu	37	8	26227825	26227825	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	8	26227825	26227825	G	C	SNP	PPP2R2A	ENST00000380737	human	ensembl	74_37	+1	known	missense	c.1240	p.D414H	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	-	no_errors	PPP2R2A	HGNC	ENSG00000221914	tier1	-	-	111	0	0.00	87	24	21.62
SCRN2	0	genome.wustl.edu	37	17	45918224	45918224	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	17	45918224	45918224	G	T	SNP	SCRN2	ENST00000584123	human	ensembl	74_37	-1	putative	missense	c.10	p.P4T	0.000	NULL	pfam_Peptidase_C69,pfam_Pept_C45_AAT	-	no_errors	SCRN2	HGNC	ENSG00000141295	tier1	-	-	61	0	0.00	60	12	16.67
SEL1L2	0	genome.wustl.edu	37	20	13866984	13866984	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	20	13866984	13866984	T	A	SNP	SEL1L2	ENST00000284951	human	ensembl	74_37	-1	known	missense	c.850	p.I284L	0.999	NULL	pfam_Sel1-like,smart_Sel1-like	-	no_errors	SEL1L2	HGNC	ENSG00000101251	tier1	-	-	87	0	0.00	95	26	21.49
BIN3	0	genome.wustl.edu	37	8	22487957	22487957	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	8	22487957	22487957	T	G	SNP	BIN3	ENST00000276416	human	ensembl	74_37	-1	known	missense	c.295	p.K99Q	1.000	pfam_BAR_dom,pfam_Vps5_C,smart_BAR_dom,pfscan_BAR_dom	pfam_BAR_dom,pfam_Vps5_C,smart_BAR_dom,pfscan_BAR_dom	-	no_errors	BIN3	HGNC	ENSG00000147439	tier1	-	-	54	0	0.00	36	19	34.55
FAM69B	0	genome.wustl.edu	37	9	139616579	139616579	+	Silent	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	9	139616579	139616579	G	A	SNP	FAM69B	ENST00000371692	human	ensembl	74_37	+1	known	silent	c.309	p.V103	1.000	NULL	pfam_FAM69_kinase_dom	-	no_errors	FAM69B	HGNC	ENSG00000165716	tier1	-	-	30	0	0.00	25	11	30.56
ZAN	0	genome.wustl.edu	37	7	100350523	100350523	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	7	100350523	100350523	A	G	SNP	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	missense	c.2795	p.E932G	0.000	NULL	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839	tier1	-	-	158	0	0.00	127	81	38.94
CACNA1F	0	genome.wustl.edu	37	X	49065762	49065762	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	X	49065762	49065762	C	G	SNP	CACNA1F	ENST00000376265	human	ensembl	74_37	-1	known	missense	c.4946	p.G1649A	0.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1F	HGNC	ENSG00000102001	tier1	-	-	106	0	0.00	53	39	41.49
CPNE4	0	genome.wustl.edu	37	3	131300488	131300488	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	131300488	131300488	G	T	SNP	CPNE4	ENST00000502818	human	ensembl	74_37	-1	known	missense	c.856	p.P286T	1.000	superfamily_C2_dom	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom	-	no_errors	CPNE4	HGNC	ENSG00000196353	tier1	-	-	48	0	0.00	39	15	27.78
CRB2	0	genome.wustl.edu	37	9	126133185	126133185	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	9	126133185	126133185	G	T	SNP	CRB2	ENST00000373631	human	ensembl	74_37	+1	known	missense	c.1853	p.G618V	0.979	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	CRB2	HGNC	ENSG00000148204	tier1	-	-	13	0	0.00	11	8	42.11
MYH9	0	genome.wustl.edu	37	22	36681262	36681262	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	22	36681262	36681262	C	G	SNP	MYH9	ENST00000216181	human	ensembl	74_37	-1	known	missense	c.5388	p.E1796D	1.000	pfam_Myosin_tail,superfamily_Regulat_G_prot_signal_superfam	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Regulat_G_prot_signal_superfam,superfamily_Prefoldin,superfamily_Myosin_S1_N,superfamily_STAT_TF_coiled-coil,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH9	HGNC	ENSG00000100345	tier1	-	-	26	0	0.00	29	10	25.64
DNAH9	0	genome.wustl.edu	37	17	11631267	11631267	+	RNA	SNP	T	T	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	17	11631267	11631267	T	C	SNP	DNAH9	ENST00000584663	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	DNAH9	HGNC	ENSG00000007174	tier1	-	-	26	0	0.00	14	13	48.15
RP9	0	genome.wustl.edu	37	7	33136123	33136123	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	7	33136123	33136123	C	T	SNP	RP9	ENST00000297157	human	ensembl	74_37	-1	known	missense	c.449	p.R150Q	1.000	NULL	NULL	-	no_errors	RP9	HGNC	ENSG00000164610	tier1	-	-	47	0	0.00	46	32	41.03
PLA2G4C	0	genome.wustl.edu	37	19	48565415	48565415	+	RNA	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	19	48565415	48565415	G	A	SNP	PLA2G4C	ENST00000599239	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PLA2G4C	HGNC	ENSG00000105499	tier1	-	-	32	0	0.00	23	7	23.33
UNC80	0	genome.wustl.edu	37	2	210791624	210791624	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	2	210791624	210791624	C	G	SNP	UNC80	ENST00000439458	human	ensembl	74_37	+1	known	missense	c.5522	p.A1841G	0.994	NULL	NULL	-	no_errors	UNC80	HGNC	ENSG00000144406	tier1	-	-	57	0	0.00	38	11	22.45
WDTC1	0	genome.wustl.edu	37	1	27632840	27632840	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	1	27632840	27632840	G	C	SNP	WDTC1	ENST00000319394	human	ensembl	74_37	+1	known	missense	c.2000	p.S667T	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,smart_TPR_repeat,pfscan_TPR-contain_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDTC1	HGNC	ENSG00000142784	tier1	-	-	43	0	0.00	22	10	31.25
GLCE	0	genome.wustl.edu	37	15	69548731	69548731	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	15	69548731	69548731	G	A	SNP	GLCE	ENST00000261858	human	ensembl	74_37	+1	known	missense	c.586	p.G196S	1.000	NULL	pfam_C5-epim	-	no_errors	GLCE	HGNC	ENSG00000138604	tier1	-	-	53	0	0.00	59	15	20.27
ENSG00000223164	0	genome.wustl.edu	37	14	28459224	28459224	+	RNA	SNP	T	T	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	14	28459224	28459224	T	C	SNP	ENSG00000223164	ENST00000411232	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.025	-	-	-	no_errors	AL445384.1	Clone_based_ensembl_gene	ENSG00000223164	tier1	-	-	110	0	0.00	42	42	50.00
PDE1C	0	genome.wustl.edu	37	7	31815286	31815286	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	7	31815286	31815286	G	A	SNP	PDE1C	ENST00000321453	human	ensembl	74_37	-1	known	missense	c.1952	p.T651M	0.999	NULL	pfam_PDEase_catalytic_dom,pfam_PDEase_N,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE1C	HGNC	ENSG00000154678	tier1	rs202172020	-	74	0	0.00	53	16	23.19
ANXA13	0	genome.wustl.edu	37	8	124696849	124696849	+	Splice_Site	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	8	124696849	124696849	C	T	SNP	ANXA13	ENST00000262219	human	ensembl	74_37	-1	known	splice_site	c.954+1	e11+1	1.000	-	-	-	no_errors	ANXA13	HGNC	ENSG00000104537	tier1	-	-	42	0	0.00	31	16	34.04
C10orf90	0	genome.wustl.edu	37	10	128193333	128193333	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	10	128193333	128193333	G	A	SNP	C10orf90	ENST00000544758	human	ensembl	74_37	-1	known	missense	c.727	p.R243C	0.983	NULL	NULL	-	no_errors	C10orf90	HGNC	ENSG00000154493	tier1	-	-	41	0	0.00	13	16	55.17
SCN4A	0	genome.wustl.edu	37	17	62026027	62026027	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	17	62026027	62026027	G	T	SNP	SCN4A	ENST00000435607	human	ensembl	74_37	-1	known	missense	c.3088	p.H1030N	1.000	pfam_Na_trans_assoc	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN4A	HGNC	ENSG00000007314	tier1	-	-	48	0	0.00	23	13	36.11
NCR1	0	genome.wustl.edu	37	19	55420623	55420623	+	Silent	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	19	55420623	55420623	C	A	SNP	NCR1	ENST00000291890	human	ensembl	74_37	+1	known	silent	c.375	p.T125	0.645	NULL	smart_Ig_sub	-	no_errors	NCR1	HGNC	ENSG00000189430	tier1	-	-	40	0	0.00	41	11	21.15
ATP6AP1	0	genome.wustl.edu	37	X	153663637	153663637	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	X	153663637	153663637	G	C	SNP	ATP6AP1	ENST00000369762	human	ensembl	74_37	+1	known	missense	c.989	p.R330P	0.999	pfam_BIG/ATPase_V1_suS1	pfam_BIG/ATPase_V1_suS1	-	no_errors	ATP6AP1	HGNC	ENSG00000071553	tier1	-	-	45	0	0.00	22	7	24.14
OR2Y1	0	genome.wustl.edu	37	5	180166694	180166694	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	5	180166694	180166694	C	A	SNP	OR2Y1	ENST00000307832	human	ensembl	74_37	-1	known	missense	c.365	p.R122L	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2Y1	HGNC	ENSG00000174339	tier1	-	-	38	0	0.00	11	9	45.00
UPF3AP2	0	genome.wustl.edu	37	17	20279504	20279504	+	RNA	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	17	20279504	20279504	G	C	SNP	UPF3AP2	ENST00000578315	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	UPF3AP2	HGNC	ENSG00000214832	tier1	-	-	39	0	0.00	26	24	48.00
CEACAM8	0	genome.wustl.edu	37	19	43092964	43092964	+	Silent	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	19	43092964	43092964	C	T	SNP	CEACAM8	ENST00000244336	human	ensembl	74_37	-1	known	silent	c.930	p.R310	0.006	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CEACAM8	HGNC	ENSG00000124469	tier1	rs144424224	-	69	0	0.00	72	23	24.21
TPM3	0	genome.wustl.edu	37	1	154144891	154144892	+	RNA	INS	-	-	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	1	154144891	154144892	-	T	INS	TPM3	ENST00000469717	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.013:0.015	-	-	-	no_errors	TPM3	HGNC	ENSG00000143549	tier1			42	0	0.00	37	5	11.90
SPATA19	0	genome.wustl.edu	37	11	133714498	133714498	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	11	133714498	133714498	A	G	SNP	SPATA19	ENST00000299140	human	ensembl	74_37	-1	known	missense	c.173	p.L58P	0.861	NULL	NULL	-	no_errors	SPATA19	HGNC	ENSG00000166118	tier1	-	-	36	0	0.00	14	5	26.32
HEG1	0	genome.wustl.edu	37	3	124732673	124732673	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	124732673	124732673	A	C	SNP	HEG1	ENST00000311127	human	ensembl	74_37	-1	known	missense	c.1750	p.S584A	0.975	NULL	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	HEG1	HGNC	ENSG00000173706	tier1	-	-	51	0	0.00	50	10	16.67
HSD17B7	0	genome.wustl.edu	37	1	162782284	162782284	+	RNA	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	1	162782284	162782284	G	C	SNP	HSD17B7	ENST00000485405	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.112	-	-	-	no_errors	HSD17B7	HGNC	ENSG00000132196	tier1	-	-	22	0	0.00	18	6	25.00
RIMS2	0	genome.wustl.edu	37	8	104709430	104709430	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	8	104709430	104709430	C	G	SNP	RIMS2	ENST00000406091	human	ensembl	74_37	+1	known	missense	c.293	p.T98R	1.000	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS2	HGNC	ENSG00000176406	tier1	-	-	87	0	0.00	81	13	13.83
FABP4	0	genome.wustl.edu	37	8	82391090	82391090	+	RNA	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	8	82391090	82391090	G	A	SNP	FABP4	ENST00000518669	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FABP4	HGNC	ENSG00000170323	tier1	-	-	63	0	0.00	30	40	57.14
IMPDH2	0	genome.wustl.edu	37	3	49064019	49064019	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	49064019	49064019	G	C	SNP	IMPDH2	ENST00000326739	human	ensembl	74_37	-1	known	missense	c.843	p.I281M	0.998	pfam_IMP_DH_GMPRt,pfam_2Npropane_dOase,pfam_FMN-dep_DH,pfam_NanE,pirsf_IMP_DH,tigrfam_IMP_DH	pfam_IMP_DH_GMPRt,pfam_CBS_dom,pfam_2Npropane_dOase,pfam_FMN-dep_DH,pfam_NanE,smart_CBS_dom,pirsf_IMP_DH,tigrfam_IMP_DH	-	no_errors	IMPDH2	HGNC	ENSG00000178035	tier1	-	-	45	0	0.00	21	25	53.19
RTDR1	0	genome.wustl.edu	37	22	23404056	23404056	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	22	23404056	23404056	T	C	SNP	RTDR1	ENST00000216036	human	ensembl	74_37	-1	known	missense	c.721	p.K241E	0.003	pfam_HEAT,pfam_Armadillo,superfamily_ARM-type_fold	pfam_HEAT,pfam_Armadillo,superfamily_ARM-type_fold	-	no_errors	RTDR1	HGNC	ENSG00000100218	tier1	-	-	32	0	0.00	35	23	39.66
LYVE1	0	genome.wustl.edu	37	11	10580737	10580737	+	Nonsense_Mutation	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	11	10580737	10580737	G	C	SNP	LYVE1	ENST00000256178	human	ensembl	74_37	-1	known	nonsense	c.890	p.S297*	0.990	NULL	pfam_Link,superfamily_C-type_lectin_fold,smart_Link,pfscan_Link,prints_Link	-	no_errors	LYVE1	HGNC	ENSG00000133800	tier1	-	-	105	0	0.00	72	14	16.28
IL1RL2	0	genome.wustl.edu	37	2	102818149	102818149	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	2	102818149	102818149	T	A	SNP	IL1RL2	ENST00000264257	human	ensembl	74_37	+1	known	missense	c.623	p.V208D	0.005	smart_Ig_sub,prints_IL-1_rcpt_I/II-typ	pfam_TIR_dom,superfamily_TIR_dom,smart_Ig_sub,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom,prints_IL-1_rcpt_I/II-typ,prints_IL-1_rcpt_I-typ	-	no_errors	IL1RL2	HGNC	ENSG00000115598	tier1	-	-	54	0	0.00	47	22	31.88
MAP2K6	0	genome.wustl.edu	37	17	67522761	67522761	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	17	67522761	67522761	T	G	SNP	MAP2K6	ENST00000590474	human	ensembl	74_37	+1	known	missense	c.792	p.F264L	0.967	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP2K6	HGNC	ENSG00000108984	tier1	-	-	49	0	0.00	37	15	28.85
PADI2	0	genome.wustl.edu	37	1	17413052	17413052	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	1	17413052	17413052	G	T	SNP	PADI2	ENST00000444885	human	ensembl	74_37	-1	known	missense	c.554	p.S185Y	0.993	NULL	pfam_PAD_C,pfam_PAD_N,superfamily_Cupredoxin,superfamily_Prot_Arg_deaminase_cen_dom	-	no_errors	PADI2	HGNC	ENSG00000117115	tier1	-	-	73	0	0.00	77	21	21.43
ENSG00000264057	0	genome.wustl.edu	37	17	62927338	62927338	+	RNA	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	17	62927338	62927338	G	T	SNP	ENSG00000264057	ENST00000583052	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-583F2.1	Clone_based_vega_gene	ENSG00000264057	tier1	-	-	31	0	0.00	34	4	10.53
ATXN7L1	0	genome.wustl.edu	37	7	105258490	105258490	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	7	105258490	105258490	G	T	SNP	ATXN7L1	ENST00000388807	human	ensembl	74_37	-1	known	nonsense	c.246	p.C82*	1.000	NULL	NULL	-	no_errors	ATXN7L1	HGNC	ENSG00000146776	tier1	-	-	50	0	0.00	41	4	8.89
TDH	0	genome.wustl.edu	37	8	11223281	11223281	+	RNA	SNP	A	A	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	8	11223281	11223281	A	T	SNP	TDH	ENST00000525246	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TDH	HGNC	ENSG00000154316	tier1	-	-	19	0	0.00	11	5	31.25
FRMD3	0	genome.wustl.edu	37	9	85905553	85905553	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	9	85905553	85905553	G	A	SNP	FRMD3	ENST00000304195	human	ensembl	74_37	-1	known	missense	c.1160	p.P387L	0.941	NULL	pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FRMD3	HGNC	ENSG00000172159	tier1	-	-	60	0	0.00	46	17	26.98
PEBP1	0	genome.wustl.edu	37	12	118582631	118582631	+	RNA	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	12	118582631	118582631	C	G	SNP	PEBP1	ENST00000542939	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PEBP1	HGNC	ENSG00000089220	tier1	-	-	23	0	0.00	26	9	25.71
KIF17	0	genome.wustl.edu	37	1	21014006	21014006	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	1	21014006	21014006	G	T	SNP	KIF17	ENST00000247986	human	ensembl	74_37	-1	known	missense	c.1813	p.P605T	0.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF17	HGNC	ENSG00000117245	tier1	-	-	31	0	0.00	48	8	14.29
KCNQ5	0	genome.wustl.edu	37	6	73904739	73904739	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	6	73904739	73904739	G	C	SNP	KCNQ5	ENST00000402622	human	ensembl	74_37	+1	known	missense	c.2431	p.D811H	1.000	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ5	HGNC	ENSG00000185760	tier1	-	-	55	0	0.00	51	16	23.88
LRRC38	0	genome.wustl.edu	37	1	13839848	13839848	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	1	13839848	13839848	C	A	SNP	LRRC38	ENST00000376085	human	ensembl	74_37	-1	known	missense	c.241	p.D81Y	0.998	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC38	HGNC	ENSG00000162494	tier1	-	-	53	0	0.00	60	19	23.75
USH1G	0	genome.wustl.edu	37	17	72916165	72916165	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	17	72916165	72916165	C	A	SNP	USH1G	ENST00000319642	human	ensembl	74_37	-1	known	missense	c.766	p.V256L	1.000	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	USH1G	HGNC	ENSG00000182040	tier1	-	-	48	0	0.00	35	14	28.57
CSMD1	0	genome.wustl.edu	37	8	2800029	2800029	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	8	2800029	2800029	A	C	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.10503	p.I3501M	0.711	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	74	0	0.00	42	18	30.00
SDR9C7	0	genome.wustl.edu	37	12	57317653	57317653	+	Silent	SNP	T	T	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	12	57317653	57317653	T	C	SNP	SDR9C7	ENST00000293502	human	ensembl	74_37	-1	known	silent	c.906	p.L302	0.010	NULL	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	SDR9C7	HGNC	ENSG00000170426	tier1	-	-	54	0	0.00	50	5	9.09
REPIN1	0	genome.wustl.edu	37	7	150068731	150068731	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	7	150068731	150068731	A	G	SNP	REPIN1	ENST00000489432	human	ensembl	74_37	+1	known	missense	c.572	p.H191R	0.997	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	REPIN1	HGNC	ENSG00000214022	tier1	-	-	25	0	0.00	18	4	18.18
NDFIP2	0	genome.wustl.edu	37	13	80125212	80125212	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	13	80125212	80125212	G	T	SNP	NDFIP2	ENST00000218652	human	ensembl	74_37	+1	known	missense	c.968	p.S323I	1.000	pfam_NEDD4/BSD2	pfam_NEDD4/BSD2	-	no_errors	NDFIP2	HGNC	ENSG00000102471	tier1	-	-	54	0	0.00	33	11	25.00
UNCX	0	genome.wustl.edu	37	7	1273220	1273220	+	Silent	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	7	1273220	1273220	C	G	SNP	UNCX	ENST00000316333	human	ensembl	74_37	+1	known	silent	c.339	p.T113	0.995	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	UNCX	HGNC	ENSG00000164853	tier1	-	-	92	0	0.00	130	18	12.16
KIAA1549	0	genome.wustl.edu	37	7	138566128	138566133	+	Splice_Site	DEL	AATAAC	AATAAC	-			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	AATAAC	AATAAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	7	138566128	138566133	AATAAC	-	DEL	KIAA1549	ENST00000422774	human	ensembl	74_37	-1	known	splice_site_del	c.4229+1_4229+1	e11+1	0.001:0.001:0.002:0.036:0.994:1.000	-	-	-	no_errors	KIAA1549	HGNC	ENSG00000122778	tier1			NA	NA	NA	NA	NA	NA
CDKN2A	0	genome.wustl.edu	37	9	21974782	21974782	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	9	21974782	21974782	C	T	SNP	CDKN2A	ENST00000446177	human	ensembl	74_37	-1	known	nonsense	c.45	p.W15*	0.045	superfamily_Ankyrin_rpt-contain_dom	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CDKN2A	HGNC	ENSG00000147889	tier1	rs138677674	-	23	0	0.00	6	5	45.45
FAM182B	0	genome.wustl.edu	37	20	25848664	25848664	+	Splice_Site	SNP	T	T	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	20	25848664	25848664	T	A	SNP	FAM182B	ENST00000582267	human	ensembl	74_37	-1	known	splice_site	c.NULL	NULL	0.024	-	-	-	no_errors	FAM182B	HGNC	ENSG00000175170	tier1	-	-	62	0	0.00	75	10	11.76
KIAA1549	0	genome.wustl.edu	37	7	138566134	138566134	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	7	138566134	138566134	C	G	SNP	KIAA1549	ENST00000422774	human	ensembl	74_37	-1	known	missense	c.4229	p.R1410T	1.000	NULL	NULL	-	no_errors	KIAA1549	HGNC	ENSG00000122778	tier1	-	-	56	0	0.00	60	8	11.76
FAM57A	0	genome.wustl.edu	37	17	636266	636267	+	Frame_Shift_Ins	INS	-	-	GGGCC			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	17	636266	636267	-	GGGCC	INS	FAM57A	ENST00000574327	human	ensembl	74_37	+1	known	frame_shift_ins	c.379_380	p.P131fs	0.000:0.000	NULL	NULL	-	no_errors	FAM57A	HGNC	ENSG00000167695	tier1			NA	NA	NA	NA	NA	NA
PLEKHG4	0	genome.wustl.edu	37	16	67315959	67315959	+	Silent	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	16	67315959	67315959	C	G	SNP	PLEKHG4	ENST00000360461	human	ensembl	74_37	+1	known	silent	c.1053	p.L351	0.972	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG4	HGNC	ENSG00000196155	tier1	-	-	55	0	0.00	21	32	60.38
CCDC13	0	genome.wustl.edu	37	3	42774443	42774443	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	42774443	42774443	G	T	SNP	CCDC13	ENST00000310232	human	ensembl	74_37	-1	known	missense	c.1531	p.H511N	1.000	NULL	superfamily_Prefoldin	-	no_errors	CCDC13	HGNC	ENSG00000244607	tier1	-	-	35	0	0.00	38	8	17.39
TMEM132C	0	genome.wustl.edu	37	12	129189821	129189821	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	12	129189821	129189821	C	T	SNP	TMEM132C	ENST00000435159	human	ensembl	74_37	+1	known	nonsense	c.2308	p.R770*	0.991	NULL	NULL	-	no_errors	TMEM132C	HGNC	ENSG00000181234	tier1	-	-	34	0	0.00	41	8	16.33
RPLP0P2	0	genome.wustl.edu	37	11	61404548	61404548	+	RNA	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	11	61404548	61404548	G	T	SNP	RPLP0P2	ENST00000496593	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPLP0P2	HGNC	ENSG00000243742	tier1	-	-	60	0	0.00	45	12	21.05
NOTCH3	0	genome.wustl.edu	37	19	15271749	15271749	+	Silent	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	19	15271749	15271749	G	T	SNP	NOTCH3	ENST00000263388	human	ensembl	74_37	-1	known	silent	c.6690	p.P2230	0.678	pirsf_Notch,pfam_DUF3454_notch	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_dom,pfam_Notch_NODP_dom,pfam_Notch_NOD_dom,pfam_EGF_extracell,pfam_DUF3454_notch,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_3,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH3	HGNC	ENSG00000074181	tier1	-	-	23	0	0.00	16	5	23.81
DNAH6	0	genome.wustl.edu	37	2	85046471	85046471	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	2	85046471	85046471	A	T	SNP	DNAH6	ENST00000237449	human	ensembl	74_37	+1	known	missense	c.12416	p.K4139M	0.996	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH6	HGNC	ENSG00000115423	tier1	-	-	57	0	0.00	59	15	20.27
ZNF491	0	genome.wustl.edu	37	19	11916909	11916909	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	19	11916909	11916909	G	T	SNP	ZNF491	ENST00000323169	human	ensembl	74_37	+1	known	missense	c.141	p.M47I	0.001	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF491	HGNC	ENSG00000177599	tier1	-	-	27	0	0.00	15	3	16.67
DKKL1	0	genome.wustl.edu	37	19	49869110	49869110	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	19	49869110	49869110	C	G	SNP	DKKL1	ENST00000221498	human	ensembl	74_37	+1	known	missense	c.385	p.P129A	0.040	NULL	NULL	-	no_errors	DKKL1	HGNC	ENSG00000104901	tier1	-	-	41	0	0.00	56	5	8.20
GCNT3	0	genome.wustl.edu	37	15	59911070	59911070	+	Silent	SNP	A	A	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	15	59911070	59911070	A	G	SNP	GCNT3	ENST00000396065	human	ensembl	74_37	+1	known	silent	c.633	p.E211	1.000	pfam_Glyco_trans_14	pfam_Glyco_trans_14	-	no_errors	GCNT3	HGNC	ENSG00000140297	tier1	-	-	50	0	0.00	76	13	14.61
TRIM69	0	genome.wustl.edu	37	15	45047473	45047473	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	15	45047473	45047473	C	A	SNP	TRIM69	ENST00000329464	human	ensembl	74_37	+1	known	missense	c.382	p.P128T	1.000	NULL	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Znf_RING	-	no_errors	TRIM69	HGNC	ENSG00000185880	tier1	-	-	48	0	0.00	24	40	62.50
PSG1	0	genome.wustl.edu	37	19	43382272	43382272	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	19	43382272	43382272	G	T	SNP	PSG1	ENST00000312439	human	ensembl	74_37	-1	known	missense	c.223	p.L75I	0.000	pfam_Ig_V-set,smart_Ig_sub	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG1	HGNC	ENSG00000231924	tier1	-	-	191	0	0.00	125	38	23.31
DMXL1	0	genome.wustl.edu	37	5	118583861	118583861	+	RNA	SNP	C	C	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	5	118583861	118583861	C	G	SNP	DMXL1	ENST00000505312	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	DMXL1	HGNC	ENSG00000172869	tier1	-	-	102	0	0.00	37	25	40.32
DDX24	0	genome.wustl.edu	37	14	94521472	94521472	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	14	94521472	94521472	T	C	SNP	DDX24	ENST00000330836	human	ensembl	74_37	-1	known	missense	c.2048	p.N683S	0.854	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX24	HGNC	ENSG00000089737	tier1	-	-	38	0	0.00	35	20	36.36
KIAA1462	0	genome.wustl.edu	37	10	30316575	30316575	+	Silent	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	10	30316575	30316575	C	T	SNP	KIAA1462	ENST00000375377	human	ensembl	74_37	-1	known	silent	c.2502	p.Q834	0.997	NULL	NULL	-	no_errors	KIAA1462	HGNC	ENSG00000165757	tier1	-	-	39	0	0.00	40	4	9.09
TAF1L	0	genome.wustl.edu	37	9	32632751	32632751	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	9	32632751	32632751	C	A	SNP	TAF1L	ENST00000242310	human	ensembl	74_37	-1	known	missense	c.2827	p.D943Y	1.000	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1L	HGNC	ENSG00000122728	tier1	-	-	69	0	0.00	26	22	45.83
OTOP1	0	genome.wustl.edu	37	4	4204225	4204229	+	Frame_Shift_Del	DEL	TTGAG	TTGAG	-			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	TTGAG	TTGAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	4	4204225	4204229	TTGAG	-	DEL	OTOP1	ENST00000296358	human	ensembl	74_37	-1	known	frame_shift_del	c.680_676	p.L226fs	0.998:0.995:0.417:0.986:0.987	pfam_Otopetrin	pfam_Otopetrin	-	no_errors	OTOP1	HGNC	ENSG00000163982	tier1			NA	NA	NA	NA	NA	NA
RASSF7	0	genome.wustl.edu	37	11	562471	562471	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	11	562471	562471	G	A	SNP	RASSF7	ENST00000344375	human	ensembl	74_37	+1	known	missense	c.517	p.A173T	0.991	NULL	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc	-	no_errors	RASSF7	HGNC	ENSG00000099849	tier1	-	-	39	0	0.00	32	11	25.58
PLA2G2D	0	genome.wustl.edu	37	1	20442883	20442883	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	1	20442883	20442883	G	C	SNP	PLA2G2D	ENST00000375105	human	ensembl	74_37	-1	known	missense	c.128	p.P43R	0.003	pfam_PLipase_A2_dom,superfamily_PLipase_A2_dom,smart_PLipase_A2_dom,prints_PLipase_A2	pfam_PLipase_A2_dom,superfamily_PLipase_A2_dom,smart_PLipase_A2_dom,prints_PLipase_A2	-	no_errors	PLA2G2D	HGNC	ENSG00000117215	tier1	-	-	79	0	0.00	93	20	17.70
ST8SIA3	0	genome.wustl.edu	37	18	55024254	55024254	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	18	55024254	55024254	T	A	SNP	ST8SIA3	ENST00000324000	human	ensembl	74_37	+1	known	missense	c.413	p.F138Y	1.000	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST8SIA3	HGNC	ENSG00000177511	tier1	-	-	40	0	0.00	18	21	53.85
AKAP9	0	genome.wustl.edu	37	7	91694631	91694631	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	7	91694631	91694631	C	T	SNP	AKAP9	ENST00000359028	human	ensembl	74_37	+1	known	nonsense	c.6100	p.Q2034*	1.000	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB	-	no_errors	AKAP9	HGNC	ENSG00000127914	tier1	-	-	99	0	0.00	40	36	46.75
OPTN	0	genome.wustl.edu	37	10	13167497	13167509	+	Frame_Shift_Del	DEL	AAGTTAGAGCTAC	AAGTTAGAGCTAC	-			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	AAGTTAGAGCTAC	AAGTTAGAGCTAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	10	13167497	13167509	AAGTTAGAGCTAC	-	DEL	OPTN	ENST00000263036	human	ensembl	74_37	+1	known	frame_shift_del	c.1078_1090	p.L361fs	1.000:1.000:0.992:0.988:0.993:0.972:0.993:0.990:0.757:0.989:0.963:0.467:0.997	NULL	pfam_NEMO_N	-	no_errors	OPTN	HGNC	ENSG00000123240	tier1			NA	NA	NA	NA	NA	NA
CSF3R	0	genome.wustl.edu	37	1	36945109	36945109	+	RNA	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	1	36945109	36945109	G	C	SNP	CSF3R	ENST00000526980	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.035	-	-	-	no_errors	CSF3R	HGNC	ENSG00000119535	tier1	-	-	36	0	0.00	33	5	13.16
STAB1	0	genome.wustl.edu	37	3	52535687	52535687	+	Silent	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	52535687	52535687	C	A	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	silent	c.249	p.S83	0.014	NULL	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327	tier1	-	-	55	0	0.00	38	46	54.76
PLCH1	0	genome.wustl.edu	37	3	155198794	155198794	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	155198794	155198794	T	C	SNP	PLCH1	ENST00000340059	human	ensembl	74_37	-1	known	missense	c.5045	p.D1682G	0.842	NULL	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCH1	HGNC	ENSG00000114805	tier1	-	-	76	0	0.00	33	44	57.14
RAPSN	0	genome.wustl.edu	37	11	47460330	47460330	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	11	47460330	47460330	C	T	SNP	RAPSN	ENST00000524487	human	ensembl	74_37	-1	novel	missense	c.967	p.E323K	0.994	NULL	pfam_Rapsyn_myristoylation/link_N,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Postsynaptic	-	no_errors	RAPSN	HGNC	ENSG00000165917	tier1	-	-	93	0	0.00	131	31	19.14
STAT1	0	genome.wustl.edu	37	2	191848465	191848465	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	2	191848465	191848465	G	A	SNP	STAT1	ENST00000361099	human	ensembl	74_37	-1	known	missense	c.1349	p.T450M	1.000	pfam_STAT_TF_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_STAT1_TAZ2-bd_C,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,pfscan_SH2	-	no_errors	STAT1	HGNC	ENSG00000115415	tier1	-	-	33	0	0.00	24	14	36.84
EMP2	0	genome.wustl.edu	37	16	10626829	10626829	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	16	10626829	10626829	G	T	SNP	EMP2	ENST00000359543	human	ensembl	74_37	-1	known	missense	c.437	p.A146E	1.000	pfam_PMP22/EMP/MP20/Claudin,prints_PMP22_EMP_MP20	pfam_PMP22/EMP/MP20/Claudin,prints_EMP_2,prints_PMP22_EMP_MP20	-	no_errors	EMP2	HGNC	ENSG00000213853	tier1	-	-	35	0	0.00	21	9	30.00
ATRX	0	genome.wustl.edu	37	X	76814269	76814272	+	Frame_Shift_Del	DEL	ATTA	ATTA	-			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	ATTA	ATTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	X	76814269	76814272	ATTA	-	DEL	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	frame_shift_del	c.6375_6372	p.N2125fs	1.000:1.000:1.000:1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1			329	0	0.00	155	89	36.48
FRAS1	0	genome.wustl.edu	37	4	79455757	79455757	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	4	79455757	79455757	G	T	SNP	FRAS1	ENST00000264895	human	ensembl	74_37	+1	known	missense	c.11080	p.A3694S	1.000	NULL	pfam_Calx_beta,pfam_VWF_C,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_VWC_out,smart_VWF_C,smart_Furin_repeat,smart_EG-like_dom,smart_Calx_beta,pfscan_VWF_C	-	no_errors	FRAS1	HGNC	ENSG00000138759	tier1	-	-	30	0	0.00	42	4	8.70
GPR32	0	genome.wustl.edu	37	19	51274851	51274851	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	19	51274851	51274851	A	C	SNP	GPR32	ENST00000270590	human	ensembl	74_37	+1	known	missense	c.994	p.T332P	0.018	prints_Formyl_pep_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Formyl_pep_rcpt	-	no_errors	GPR32	HGNC	ENSG00000142511	tier1	rs201404376	-	40	0	0.00	30	10	24.39
EEF1DP3	0	genome.wustl.edu	37	13	32526746	32526746	+	RNA	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	13	32526746	32526746	G	T	SNP	EEF1DP3	ENST00000428783	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	EEF1DP3	HGNC	ENSG00000229715	tier1	-	-	33	0	0.00	17	8	32.00
MED13L	0	genome.wustl.edu	37	12	116408418	116408418	+	Silent	SNP	A	A	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	12	116408418	116408418	A	G	SNP	MED13L	ENST00000281928	human	ensembl	74_37	-1	known	silent	c.6048	p.D2016	1.000	pfam_Mediator_Med13	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13L	HGNC	ENSG00000123066	tier1	-	-	50	0	0.00	42	12	22.22
LOC100288152	0	genome.wustl.edu	37	5	475338	475355	+	RNA	DEL	GGAAAGTTAGGGTCACCG	GGAAAGTTAGGGTCACCG	-			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	GGAAAGTTAGGGTCACCG	GGAAAGTTAGGGTCACCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	5	475338	475355	GGAAAGTTAGGGTCACCG	-	DEL	LOC100288152	ENST00000607286	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005:0.003:0.004:0.003:0.002:0.001:0.001:0.000:0.000:0.000:0.000:0.001:0.002:0.002:0.003:0.010:0.018:0.018	-	-	-	no_errors	CTD-2228K2.7	Clone_based_vega_gene	ENSG00000225138	tier1			NA	NA	NA	NA	NA	NA
MUC5B	0	genome.wustl.edu	37	11	1280258	1280258	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	11	1280258	1280258	G	C	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.16689	p.Q5563H	0.005	pfam_VWF_C,smart_VWF_C,pfscan_VWF_C	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	82	0	0.00	83	29	25.89
DLEC1	0	genome.wustl.edu	37	3	38104286	38104286	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	38104286	38104286	A	T	SNP	DLEC1	ENST00000346219	human	ensembl	74_37	+1	known	missense	c.1088	p.E363V	0.000	NULL	superfamily_PapD-like	-	no_errors	DLEC1	HGNC	ENSG00000008226	tier1	-	-	32	0	0.00	47	32	40.51
MSLN	0	genome.wustl.edu	37	16	816491	816491	+	Splice_Site	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	16	816491	816491	G	C	SNP	MSLN	ENST00000382862	human	ensembl	74_37	+1	known	splice_site	c.1230+1	e11+1	0.448	-	-	-	no_errors	MSLN	HGNC	ENSG00000102854	tier1	-	-	41	0	0.00	35	23	39.66
SCGB2A2	0	genome.wustl.edu	37	11	62038380	62038380	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	11	62038380	62038380	T	G	SNP	SCGB2A2	ENST00000227918	human	ensembl	74_37	+1	known	missense	c.83	p.V28G	0.000	pfam_Secretoglobin,superfamily_Secretoglobin	pfam_Secretoglobin,superfamily_Secretoglobin	-	no_errors	SCGB2A2	HGNC	ENSG00000110484	tier1	-	-	35	0	0.00	45	14	23.33
MTHFR	0	genome.wustl.edu	37	1	11854057	11854057	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	1	11854057	11854057	G	C	SNP	MTHFR	ENST00000376583	human	ensembl	74_37	-1	known	missense	c.1560	p.I520M	1.000	NULL	pfam_Mehydrof_redctse,tigrfam_Fadh2_euk	-	no_errors	MTHFR	HGNC	ENSG00000177000	tier1	-	-	34	0	0.00	43	21	32.81
MAP3K5	0	genome.wustl.edu	37	6	137018523	137018523	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	6	137018523	137018523	T	A	SNP	MAP3K5	ENST00000359015	human	ensembl	74_37	-1	known	missense	c.809	p.Q270L	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP3K5	HGNC	ENSG00000197442	tier1	-	-	81	0	0.00	42	13	23.64
F5	0	genome.wustl.edu	37	1	169529886	169529886	+	Silent	SNP	G	G	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	1	169529886	169529886	G	A	SNP	F5	ENST00000367797	human	ensembl	74_37	-1	known	silent	c.492	p.D164	1.000	pfam_Cu-oxidase_3,superfamily_Cupredoxin	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F5	HGNC	ENSG00000198734	tier1	-	-	64	0	0.00	28	37	56.92
XKRX	0	genome.wustl.edu	37	X	100183251	100183251	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	X	100183251	100183251	G	T	SNP	XKRX	ENST00000328526	human	ensembl	74_37	-1	known	missense	c.82	p.P28T	0.003	NULL	pfam_Transport_prot_XK	-	no_errors	XKRX	HGNC	ENSG00000182489	tier1	-	-	44	0	0.00	23	4	14.81
FCRL6	0	genome.wustl.edu	37	1	159785345	159785345	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	1	159785345	159785345	C	T	SNP	FCRL6	ENST00000368106	human	ensembl	74_37	+1	known	missense	c.1199	p.A400V	0.001	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCRL6	HGNC	ENSG00000181036	tier1	rs149132393	-	18	0	0.00	28	10	26.32
CCNF	0	genome.wustl.edu	37	16	2505464	2505464	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	16	2505464	2505464	G	T	SNP	CCNF	ENST00000397066	human	ensembl	74_37	+1	known	missense	c.1784	p.S595I	1.000	NULL	pfam_Cyclin_N,pfam_Cyclin_C-dom,pfam_F-box_dom,superfamily_Cyclin-like,superfamily_F-box_dom,smart_F-box_dom,smart_Cyclin-like,pfscan_F-box_dom	-	no_errors	CCNF	HGNC	ENSG00000162063	tier1	-	-	58	0	0.00	54	16	22.86
TAF2	0	genome.wustl.edu	37	8	120756584	120756584	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	8	120756584	120756584	T	C	SNP	TAF2	ENST00000378164	human	ensembl	74_37	-1	known	missense	c.3158	p.D1053G	1.000	NULL	pfam_Peptidase_M1_N,superfamily_ARM-type_fold	-	no_errors	TAF2	HGNC	ENSG00000064313	tier1	-	-	53	0	0.00	36	5	12.20
OR4L1	0	genome.wustl.edu	37	14	20528449	20528467	+	Frame_Shift_Del	DEL	CATAGATTTGCTCACTGAC	CATAGATTTGCTCACTGAC	-			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	CATAGATTTGCTCACTGAC	CATAGATTTGCTCACTGAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	14	20528449	20528467	CATAGATTTGCTCACTGAC	-	DEL	OR4L1	ENST00000315683	human	ensembl	74_37	+1	known	frame_shift_del	c.246_264	p.I83fs	0.310:0.063:0.001:0.001:0.010:0.035:0.041:0.029:0.169:0.162:0.267:0.267:0.008:0.000:0.000:0.000:0.000:0.001:0.002	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR4L1	HGNC	ENSG00000176246	tier1			NA	NA	NA	NA	NA	NA
SPNS1	0	genome.wustl.edu	37	16	28986111	28986111	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	16	28986111	28986111	T	G	SNP	SPNS1	ENST00000565975	human	ensembl	74_37	+1	putative	missense	c.11	p.F4C	0.010	NULL	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SPNS1	HGNC	ENSG00000169682	tier1	-	-	20	0	0.00	8	8	50.00
CPNE4	0	genome.wustl.edu	37	3	131300489	131300489	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	3	131300489	131300489	A	T	SNP	CPNE4	ENST00000502818	human	ensembl	74_37	-1	known	missense	c.855	p.N285K	0.884	superfamily_C2_dom	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom	-	no_errors	CPNE4	HGNC	ENSG00000196353	tier1	-	-	47	0	0.00	41	15	26.79
CDH4	0	genome.wustl.edu	37	20	60508134	60508134	+	Silent	SNP	C	C	A			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	20	60508134	60508134	C	A	SNP	CDH4	ENST00000360469	human	ensembl	74_37	+1	known	silent	c.2331	p.R777	0.053	pfam_Cadherin_cytoplasmic-dom,prints_Cadherin/Desmocollin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH4	HGNC	ENSG00000179242	tier1	-	-	23	0	0.00	60	11	15.49
BOD1L1	0	genome.wustl.edu	37	4	13588085	13588096	+	In_Frame_Del	DEL	CATCTGGATTAT	CATCTGGATTAT	-			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	CATCTGGATTAT	CATCTGGATTAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	4	13588085	13588096	CATCTGGATTAT	-	DEL	BOD1L1	ENST00000040738	human	ensembl	74_37	-1	known	in_frame_del	c.8368_8357	p.DNPD2786in_frame_del	0.874:0.813:0.646:0.614:0.411:0.357:0.328:0.277:0.287:0.568:0.656:0.960	NULL	NULL	-	no_errors	BOD1L1	HGNC	ENSG00000038219	tier1			NA	NA	NA	NA	NA	NA
FOXP3	0	genome.wustl.edu	37	X	49107859	49107859	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	X	49107859	49107859	A	G	SNP	FOXP3	ENST00000376207	human	ensembl	74_37	-1	known	missense	c.1232	p.L411P	0.979	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXP3	HGNC	ENSG00000049768	tier1	-	-	24	0	0.00	10	10	50.00
KLHL11	0	genome.wustl.edu	37	17	40011503	40011503	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB2W-01A-11D-A38Z-09	TCGA-DX-AB2W-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9e7a22ef-8718-40eb-a310-51aa9a7cac0f	c2643ccc-1642-43f0-932f-2ec47a0d943b	17	40011503	40011503	C	T	SNP	KLHL11	ENST00000319121	human	ensembl	74_37	-1	known	missense	c.616	p.V206M	1.000	pfam_BACK,smart_BACK	pfam_BACK,pfam_BTB_POZ,pfam_Kelch_1,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL11	HGNC	ENSG00000178502	tier1	-	-	84	0	0.00	68	22	24.44
