Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
SVOPL	0	genome.wustl.edu	37	7	138305823	138305823	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	138305823	138305823	T	G	SNP	SVOPL	ENST00000288513	human	ensembl	74_37	-1	known	missense	c.865	p.I289L	1.000	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SVOPL	HGNC	ENSG00000157703	tier1	-	-	46	0	0.00	32	6	15.79
GFRA4	0	genome.wustl.edu	37	20	3644008	3644010	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	3644008	3644010	CAG	-	DEL	GFRA4	ENST00000319242	human	ensembl	74_37	-1	known	in_frame_del	c.39_37	p.L15in_frame_del	0.177:0.215:0.210	NULL	pfam_GDNF/GAS1,smart_GDNF/GAS1,prints_GDNF_rcpt	-	no_errors	GFRA4	HGNC	ENSG00000125861	tier1			63	0	0.00	32	3	8.57
ENSG00000235852	0	genome.wustl.edu	37	2	191745599	191745601	+	RNA	DEL	GCA	GCA	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	191745599	191745601	GCA	-	DEL	ENSG00000235852	ENST00000413911	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	AC005540.3	Clone_based_vega_gene	ENSG00000235852	tier1			10	0	0.00	13	3	18.75
PDE4DIP	0	genome.wustl.edu	37	1	144852395	144852395	+	Silent	SNP	T	T	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	144852395	144852395	T	G	SNP	PDE4DIP	ENST00000369356	human	ensembl	74_37	-1	known	silent	c.7048	p.R2350	0.484	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104	tier1	-	-	257	0	0.00	211	26	10.97
CARD14	0	genome.wustl.edu	37	17	78172401	78172401	+	RNA	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	78172401	78172401	C	T	SNP	CARD14	ENST00000573754	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CARD14	HGNC	ENSG00000141527	tier1	-	-	67	0	0.00	44	19	29.69
TMEM63B	0	genome.wustl.edu	37	6	44118302	44118302	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	44118302	44118302	C	A	SNP	TMEM63B	ENST00000259746	human	ensembl	74_37	+1	known	missense	c.1609	p.L537M	1.000	pfam_DUF221	pfam_DUF221	-	no_errors	TMEM63B	HGNC	ENSG00000137216	tier1	-	-	34	0	0.00	19	10	34.48
FGF3	0	genome.wustl.edu	37	11	69625374	69625374	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	69625374	69625374	G	A	SNP	FGF3	ENST00000334134	human	ensembl	74_37	-1	known	missense	c.419	p.T140M	0.020	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF3	HGNC	ENSG00000186895	tier1	-	-	84	0	0.00	71	30	29.70
TMEM39B	0	genome.wustl.edu	37	1	32540672	32540672	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	32540672	32540672	G	A	SNP	TMEM39B	ENST00000336294	human	ensembl	74_37	+1	known	missense	c.125	p.R42H	1.000	NULL	pfam_Uncharacterised_TMEM39	-	no_errors	TMEM39B	HGNC	ENSG00000121775	tier1	-	-	63	0	0.00	37	9	19.57
TPRX1	0	genome.wustl.edu	37	19	48305590	48305590	+	Silent	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	48305590	48305590	T	C	SNP	TPRX1	ENST00000535759	human	ensembl	74_37	-1	known	silent	c.969	p.P323	0.035	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	TPRX1	HGNC	ENSG00000178928	tier1	rs12461263	-	148	0	0.00	80	18	18.37
HUS1B	0	genome.wustl.edu	37	6	656913	656913	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	656913	656913	C	T	SNP	HUS1B	ENST00000380907	human	ensembl	74_37	-1	known	missense	c.32	p.G11D	0.000	pfam_Hus1/Mec3,pirsf_Cell_cycle_HUS1	pfam_Hus1/Mec3,pirsf_Cell_cycle_HUS1	-	no_errors	HUS1B	HGNC	ENSG00000188996	tier1	-	-	75	0	0.00	44	4	8.33
GRIN3B	0	genome.wustl.edu	37	19	1009551	1009577	+	In_Frame_Del	DEL	GCCCCCGCGGAGGCCCCACCACACTCT	GCCCCCGCGGAGGCCCCACCACACTCT	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	GCCCCCGCGGAGGCCCCACCACACTCT	GCCCCCGCGGAGGCCCCACCACACTCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	1009551	1009577	GCCCCCGCGGAGGCCCCACCACACTCT	-	DEL	GRIN3B	ENST00000234389	human	ensembl	74_37	+1	known	in_frame_del	c.3082_3108	p.APAEAPPHS1028in_frame_del	0.060:0.029:0.000:0.000:0.001:0.000:0.000:0.000:0.000:0.001:0.001:0.001:0.001:0.000:0.008:0.007:0.002:0.000:0.000:0.000:0.000:0.004:0.002:0.001:0.000:0.000:0.000	NULL	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN3B	HGNC	ENSG00000116032	tier1			NA	NA	NA	NA	NA	NA
SLC5A11	0	genome.wustl.edu	37	16	24895407	24895407	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	24895407	24895407	C	T	SNP	SLC5A11	ENST00000347898	human	ensembl	74_37	+1	known	nonsense	c.619	p.Q207*	1.000	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A11	HGNC	ENSG00000158865	tier1	-	-	22	0	0.00	9	7	43.75
BCL6B	0	genome.wustl.edu	37	17	6930824	6930824	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	6930824	6930824	C	T	SNP	BCL6B	ENST00000293805	human	ensembl	74_37	+1	known	silent	c.1326	p.C442	0.983	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	BCL6B	HGNC	ENSG00000161940	tier1	-	-	69	0	0.00	30	9	23.08
CTBP2	0	genome.wustl.edu	37	10	126715774	126715774	+	Silent	SNP	A	A	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	126715774	126715774	A	T	SNP	CTBP2	ENST00000309035	human	ensembl	74_37	-1	known	silent	c.555	p.S185	0.636	NULL	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom	-	no_errors	CTBP2	HGNC	ENSG00000175029	tier1	-	-	71	0	0.00	58	11	15.71
DGKE	0	genome.wustl.edu	37	17	54939227	54939227	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	54939227	54939227	G	A	SNP	DGKE	ENST00000284061	human	ensembl	74_37	+1	known	missense	c.1360	p.G454S	1.000	pfam_Diacylglycerol_kin_accessory,smart_Diacylglycerol_kin_accessory	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKE	HGNC	ENSG00000153933	tier1	-	-	83	0	0.00	55	16	22.54
ITPR2	0	genome.wustl.edu	37	12	26775294	26775294	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	26775294	26775294	G	A	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	missense	c.3167	p.T1056M	0.999	superfamily_ARM-type_fold	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104	tier1	-	-	37	0	0.00	24	7	22.58
C1orf86	0	genome.wustl.edu	37	1	2125187	2125187	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	2125187	2125187	G	A	SNP	C1orf86	ENST00000378545	human	ensembl	74_37	-1	known	missense	c.670	p.R224C	0.000	NULL	NULL	-	no_errors	C1orf86	HGNC	ENSG00000162585	tier1	-	-	51	0	0.00	28	15	34.88
TADA2B	0	genome.wustl.edu	37	4	7055968	7055968	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	4	7055968	7055968	G	A	SNP	TADA2B	ENST00000310074	human	ensembl	74_37	+1	known	silent	c.450	p.P150	0.140	pirsf_Transcriptional_adaptor_2	pfam_SANT/Myb,pfam_Znf_ZZ,superfamily_Homeodomain-like,smart_Znf_ZZ,smart_SANT/Myb,pirsf_Transcriptional_adaptor_2,pfscan_Znf_ZZ,pfscan_Myb-like_dom	-	no_errors	TADA2B	HGNC	ENSG00000173011	tier1	-	-	46	0	0.00	20	10	33.33
KIF3B	0	genome.wustl.edu	37	20	30898718	30898718	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	30898718	30898718	C	T	SNP	KIF3B	ENST00000375712	human	ensembl	74_37	+1	known	nonsense	c.1138	p.R380*	1.000	superfamily_P-loop_NTPase	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF3B	HGNC	ENSG00000101350	tier1	-	-	23	0	0.00	19	11	36.67
PSG2	0	genome.wustl.edu	37	19	43585129	43585129	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	43585129	43585129	C	T	SNP	PSG2	ENST00000406487	human	ensembl	74_37	-1	known	missense	c.334	p.V112I	0.304	pfam_Ig_V-set,smart_Ig_sub	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG2	HGNC	ENSG00000242221	tier1	-	-	240	0	0.00	171	65	27.54
MAGEE1	0	genome.wustl.edu	37	X	75650976	75650976	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	X	75650976	75650976	G	T	SNP	MAGEE1	ENST00000361470	human	ensembl	74_37	+1	known	missense	c.2653	p.D885Y	0.883	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE1	HGNC	ENSG00000198934	tier1	-	-	37	0	0.00	37	4	9.76
DTYMK	0	genome.wustl.edu	37	2	242615580	242615580	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	242615580	242615580	T	C	SNP	DTYMK	ENST00000305784	human	ensembl	74_37	-1	known	missense	c.601	p.T201A	0.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase,tigrfam_Thymidylate_kinase	-	no_errors	DTYMK	HGNC	ENSG00000168393	tier1	-	-	42	0	0.00	13	16	55.17
FIGLA	0	genome.wustl.edu	37	2	71012570	71012570	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	71012570	71012570	T	A	SNP	FIGLA	ENST00000332372	human	ensembl	74_37	-1	known	missense	c.586	p.I196F	0.015	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	FIGLA	HGNC	ENSG00000183733	tier1	-	-	63	0	0.00	68	23	25.27
LOC150776	0	genome.wustl.edu	37	2	132277119	132277119	+	RNA	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	132277119	132277119	G	A	SNP	LOC150776	ENST00000438378	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.995	-	-	-	no_errors	AC093838.4	Clone_based_vega_gene	ENSG00000152117	tier1	-	-	30	0	0.00	21	6	22.22
ZNF518B	0	genome.wustl.edu	37	4	10447632	10447632	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	4	10447632	10447632	C	T	SNP	ZNF518B	ENST00000326756	human	ensembl	74_37	-1	known	silent	c.321	p.A107	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF518B	HGNC	ENSG00000178163	tier1	-	-	27	0	0.00	18	12	40.00
SP3	0	genome.wustl.edu	37	2	174774931	174774931	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	174774931	174774931	T	C	SNP	SP3	ENST00000310015	human	ensembl	74_37	-1	known	missense	c.2084	p.H695R	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Galactose-bd-like,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP3	HGNC	ENSG00000172845	tier1	-	-	37	0	0.00	36	14	28.00
CCDC87	0	genome.wustl.edu	37	11	66360012	66360012	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	66360012	66360012	C	T	SNP	CCDC87	ENST00000333861	human	ensembl	74_37	-1	known	missense	c.475	p.A159T	1.000	NULL	pfam_MAP65_Ase1_PRC1	-	no_errors	CCDC87	HGNC	ENSG00000182791	tier1	-	-	42	0	0.00	18	10	35.71
XIST	0	genome.wustl.edu	37	X	73046604	73046604	+	RNA	SNP	T	T	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	X	73046604	73046604	T	G	SNP	XIST	ENST00000421322	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	tier1	-	-	49	0	0.00	11	15	57.69
CORO7	0	genome.wustl.edu	37	16	4411429	4411429	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	4411429	4411429	C	T	SNP	CORO7	ENST00000576437	human	ensembl	74_37	-1	known	missense	c.305	p.R102H	0.996	NULL	NULL	-	no_errors	CORO7	HGNC	ENSG00000262246	tier1	-	-	57	0	0.00	34	7	17.07
KIF23	0	genome.wustl.edu	37	15	69732777	69732777	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	69732777	69732777	G	A	SNP	KIF23	ENST00000260363	human	ensembl	74_37	+1	known	missense	c.2018	p.R673Q	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF23	HGNC	ENSG00000137807	tier1	-	-	44	0	0.00	27	11	28.95
SRP68	0	genome.wustl.edu	37	17	74053539	74053539	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	74053539	74053539	T	A	SNP	SRP68	ENST00000307877	human	ensembl	74_37	-1	known	missense	c.923	p.D308V	1.000	NULL	NULL	-	no_errors	SRP68	HGNC	ENSG00000167881	tier1	-	-	103	0	0.00	98	40	28.78
SRRM4	0	genome.wustl.edu	37	12	119592120	119592120	+	Silent	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	119592120	119592120	G	T	SNP	SRRM4	ENST00000267260	human	ensembl	74_37	+1	known	silent	c.1464	p.R488	0.998	NULL	NULL	-	no_errors	SRRM4	HGNC	ENSG00000139767	tier1	-	-	158	0	0.00	105	48	31.17
F5	0	genome.wustl.edu	37	1	169524539	169524539	+	Silent	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	169524539	169524539	G	T	SNP	F5	ENST00000367797	human	ensembl	74_37	-1	known	silent	c.999	p.T333	0.065	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F5	HGNC	ENSG00000198734	tier1	-	-	43	0	0.00	47	17	26.56
GBA2	0	genome.wustl.edu	37	9	35744370	35744370	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	35744370	35744370	C	T	SNP	GBA2	ENST00000545786	human	ensembl	74_37	-1	known	missense	c.491	p.R164H	0.984	pfam_GBA2_N,pirsf_Beta_glucosidase_GBA2-type	pfam_Glucosylceramidase,pfam_GBA2_N,superfamily_6-hairpin_glycosidase-like,pirsf_Beta_glucosidase_GBA2-type	-	no_errors	GBA2	HGNC	ENSG00000070610	tier1	rs192753525	GMAF=0.0005	36	0	0.00	27	7	20.59
CHRM1	0	genome.wustl.edu	37	11	62677864	62677864	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	62677864	62677864	T	C	SNP	CHRM1	ENST00000306960	human	ensembl	74_37	-1	known	missense	c.709	p.S237G	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M1_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CHRM1	HGNC	ENSG00000168539	tier1	-	-	21	0	0.00	7	6	46.15
NEB	0	genome.wustl.edu	37	2	152464097	152464097	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	152464097	152464097	T	G	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.12560	p.K4187T	1.000	pfam_Nebulin_35r-motif,smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091	tier1	-	-	129	0	0.00	136	24	15.00
PRPF6	0	genome.wustl.edu	37	20	62632529	62632529	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	62632529	62632529	A	T	SNP	PRPF6	ENST00000266079	human	ensembl	74_37	+1	known	missense	c.1123	p.I375F	1.000	NULL	pfam_PRP1_N,smart_HAT,smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	PRPF6	HGNC	ENSG00000101161	tier1	-	-	26	0	0.00	17	5	22.73
NBEAL1	0	genome.wustl.edu	37	2	203991416	203991416	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	203991416	203991416	G	A	SNP	NBEAL1	ENST00000449802	human	ensembl	74_37	+1	known	missense	c.3035	p.R1012H	1.000	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL1	HGNC	ENSG00000144426	tier1	-	-	78	0	0.00	37	23	38.33
ANKFN1	0	genome.wustl.edu	37	17	54588480	54588480	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	54588480	54588480	G	A	SNP	ANKFN1	ENST00000566473	human	ensembl	74_37	+1	novel	silent	c.3300	p.A1100	0.000	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Fibronectin_type3,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Fibronectin_type3	-	no_errors	ANKFN1	HGNC	ENSG00000153930	tier1	-	-	75	0	0.00	59	28	32.18
CABP1	0	genome.wustl.edu	37	12	121098562	121098562	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	121098562	121098562	C	T	SNP	CABP1	ENST00000316803	human	ensembl	74_37	+1	known	silent	c.858	p.F286	1.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CABP1	HGNC	ENSG00000157782	tier1	-	-	71	0	0.00	58	15	20.55
OR5V1	0	genome.wustl.edu	37	6	29323056	29323056	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	29323056	29323056	C	T	SNP	OR5V1	ENST00000377154	human	ensembl	74_37	-1	known	missense	c.917	p.S306N	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5V1	HGNC	ENSG00000243729	tier1	-	-	66	0	0.00	44	20	31.25
TTC24	0	genome.wustl.edu	37	1	156555138	156555138	+	RNA	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	156555138	156555138	T	C	SNP	TTC24	ENST00000478081	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TTC24	HGNC	ENSG00000187862	tier1	-	-	36	0	0.00	22	6	21.43
FRMPD3	0	genome.wustl.edu	37	X	106843776	106843776	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	X	106843776	106843776	C	T	SNP	FRMPD3	ENST00000276185	human	ensembl	74_37	+1	known	missense	c.2606	p.P869L	0.990	NULL	pfam_FERM_central,pfam_PDZ,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ	-	no_errors	FRMPD3	HGNC	ENSG00000147234	tier1	-	-	9	0	0.00	5	7	58.33
LOC101927209	0	genome.wustl.edu	37	1	142621403	142621403	+	RNA	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	142621403	142621403	G	T	SNP	LOC101927209	ENST00000412092	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.074	-	-	-	no_errors	RP11-417J8.3	Clone_based_vega_gene	ENSG00000230880	tier1	rs2992190	-	12	0	0.00	10	5	33.33
VWA5B1	0	genome.wustl.edu	37	1	20669069	20669069	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	20669069	20669069	C	T	SNP	VWA5B1	ENST00000289815	human	ensembl	74_37	+1	known	missense	c.2278	p.R760W	0.001	NULL	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA5B1	HGNC	ENSG00000158816	tier1	-	-	98	0	0.00	71	21	22.83
BCAM	0	genome.wustl.edu	37	19	45316842	45316842	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	45316842	45316842	G	A	SNP	BCAM	ENST00000270233	human	ensembl	74_37	+1	known	missense	c.749	p.R250H	0.991	smart_Ig_sub,pfscan_Ig-like_dom	pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	BCAM	HGNC	ENSG00000187244	tier1	-	-	25	0	0.00	9	7	43.75
ARHGEF17	0	genome.wustl.edu	37	11	73071453	73071453	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	73071453	73071453	C	T	SNP	ARHGEF17	ENST00000263674	human	ensembl	74_37	+1	known	missense	c.4295	p.P1432L	0.995	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,superfamily_Vinculin/catenin,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF17	HGNC	ENSG00000110237	tier1	rs140312706	-	38	0	0.00	23	7	23.33
C10orf68	0	genome.wustl.edu	37	10	32983811	32983811	+	Silent	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	32983811	32983811	T	C	SNP	C10orf68	ENST00000375025	human	ensembl	74_37	+1	known	silent	c.270	p.H90	0.000	NULL	NULL	-	no_errors	C10orf68	HGNC	ENSG00000150076	tier1	-	-	144	0	0.00	76	45	36.89
FN1	0	genome.wustl.edu	37	2	216288076	216288076	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	216288076	216288076	C	T	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	missense	c.1390	p.A464T	1.000	superfamily_Kringle-like	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414	tier1	-	-	46	0	0.00	34	10	22.73
CPSF6	0	genome.wustl.edu	37	12	69652407	69652407	+	Silent	SNP	A	A	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	69652407	69652407	A	C	SNP	CPSF6	ENST00000266679	human	ensembl	74_37	+1	known	silent	c.843	p.P281	0.997	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CPSF6	HGNC	ENSG00000111605	tier1	-	-	80	0	0.00	35	12	25.53
SYNE1	0	genome.wustl.edu	37	6	152826384	152826384	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	152826384	152826384	T	C	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.730	p.T244A	0.356	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	50	0	0.00	39	17	30.36
BLVRB	0	genome.wustl.edu	37	19	40964425	40964425	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	40964425	40964425	T	C	SNP	BLVRB	ENST00000263368	human	ensembl	74_37	-1	known	missense	c.107	p.D36G	0.993	pfam_NmrA,pfam_Epimerase_deHydtase,pfam_3Beta_OHSteriod_DH/Estase	pfam_NmrA,pfam_Epimerase_deHydtase,pfam_3Beta_OHSteriod_DH/Estase	-	no_errors	BLVRB	HGNC	ENSG00000090013	tier1	-	-	10	0	0.00	11	6	35.29
ITGA10	0	genome.wustl.edu	37	1	145535815	145535815	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	145535815	145535815	G	A	SNP	ITGA10	ENST00000369304	human	ensembl	74_37	+1	known	missense	c.2003	p.R668Q	0.696	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA10	HGNC	ENSG00000143127	tier1	-	-	26	0	0.00	14	13	48.15
NRD1	0	genome.wustl.edu	37	1	52280213	52280213	+	RNA	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	52280213	52280213	T	C	SNP	NRD1	ENST00000483007	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	NRD1	HGNC	ENSG00000078618	tier1	-	-	73	0	0.00	47	10	17.24
BLMH	0	genome.wustl.edu	37	17	28601155	28601155	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	28601155	28601155	G	A	SNP	BLMH	ENST00000261714	human	ensembl	74_37	-1	known	nonsense	c.706	p.R236*	1.000	pfam_Peptidase_C1B,pirsf_Peptidase_C1B	pfam_Peptidase_C1B,pirsf_Peptidase_C1B	-	no_errors	BLMH	HGNC	ENSG00000108578	tier1	-	-	156	0	0.00	70	38	35.19
NDRG1	0	genome.wustl.edu	37	8	134266812	134266812	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	8	134266812	134266812	C	T	SNP	NDRG1	ENST00000323851	human	ensembl	74_37	-1	known	silent	c.564	p.P188	0.000	pfam_Ndr	pfam_Ndr	-	no_errors	NDRG1	HGNC	ENSG00000104419	tier1	-	-	66	0	0.00	58	26	30.95
TUBE1	0	genome.wustl.edu	37	6	112393216	112393216	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	112393216	112393216	G	A	SNP	TUBE1	ENST00000368662	human	ensembl	74_37	-1	known	silent	c.1158	p.S386	0.969	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Epsilon_tubulin,prints_Tubulin	-	no_errors	TUBE1	HGNC	ENSG00000074935	tier1	-	-	57	0	0.00	71	18	20.22
TP53	0	genome.wustl.edu	37	17	7577525	7577527	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	7577525	7577527	GAG	-	DEL	TP53	ENST00000269305	human	ensembl	74_37	-1	known	in_frame_del	c.756_754	p.L252in_frame_del	1.000:1.000:1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1			41	0	0.00	20	7	25.93
LOC728554	0	genome.wustl.edu	37	5	177310858	177310858	+	RNA	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	5	177310858	177310858	C	T	SNP	LOC728554	ENST00000506672	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	RP11-423H2.1	Clone_based_vega_gene	ENSG00000170089	tier1	-	-	56	0	0.00	46	7	13.21
HELZ	0	genome.wustl.edu	37	17	65074649	65074649	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	65074649	65074649	C	G	SNP	HELZ	ENST00000358691	human	ensembl	74_37	-1	known	missense	c.5548	p.E1850Q	0.998	NULL	pfam_Znf_CCCH,superfamily_P-loop_NTPase,smart_Znf_CCCH	-	no_errors	HELZ	HGNC	ENSG00000198265	tier1	-	-	42	0	0.00	40	4	9.09
WIZ	0	genome.wustl.edu	37	19	15550925	15550925	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	15550925	15550925	G	A	SNP	WIZ	ENST00000389282	human	ensembl	74_37	-1	known	silent	c.736	p.L246	0.769	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	WIZ	HGNC	ENSG00000011451	tier1	-	-	18	0	0.00	18	10	35.71
ZFYVE1	0	genome.wustl.edu	37	14	73491176	73491176	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	14	73491176	73491176	G	T	SNP	ZFYVE1	ENST00000553891	human	ensembl	74_37	-1	known	missense	c.41	p.P14Q	0.996	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,superfamily_P-loop_NTPase,superfamily_Growth_fac_rcpt_N_dom,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE1	HGNC	ENSG00000165861	tier1	-	-	32	0	0.00	17	4	19.05
ENSG00000242288	0	genome.wustl.edu	37	10	75480331	75480331	+	RNA	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	75480331	75480331	G	A	SNP	ENSG00000242288	ENST00000399449	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-464F9.1	Clone_based_vega_gene	ENSG00000242288	tier1	-	-	382	0	0.00	310	89	22.25
TTC13	0	genome.wustl.edu	37	1	231067164	231067164	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	231067164	231067164	T	C	SNP	TTC13	ENST00000366661	human	ensembl	74_37	-1	known	missense	c.1180	p.S394G	1.000	pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC13	HGNC	ENSG00000143643	tier1	-	-	43	0	0.00	49	13	20.97
NMD3	0	genome.wustl.edu	37	3	160960405	160960405	+	Silent	SNP	A	A	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	160960405	160960405	A	T	SNP	NMD3	ENST00000351193	human	ensembl	74_37	+1	known	silent	c.981	p.I327	0.520	NULL	pfam_NMD3	-	no_errors	NMD3	HGNC	ENSG00000169251	tier1	-	-	65	0	0.00	50	22	30.56
EGFR	0	genome.wustl.edu	37	7	55087060	55087060	+	Splice_Site	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	55087060	55087060	T	C	SNP	EGFR	ENST00000275493	human	ensembl	74_37	+1	known	splice_site	c.88+2	e1+2	0.976	-	-	-	no_errors	EGFR	HGNC	ENSG00000146648	tier1	-	-	20	0	0.00	18	4	17.39
PRR12	0	genome.wustl.edu	37	19	50097789	50097789	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	50097789	50097789	C	T	SNP	PRR12	ENST00000418929	human	ensembl	74_37	+1	novel	missense	c.278	p.S93L	0.999	NULL	NULL	-	no_errors	PRR12	HGNC	ENSG00000126464	tier1	-	-	47	0	0.00	24	8	25.00
TMEM132C	0	genome.wustl.edu	37	12	128900080	128900080	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	128900080	128900080	C	A	SNP	TMEM132C	ENST00000435159	human	ensembl	74_37	+1	known	missense	c.889	p.P297T	1.000	NULL	NULL	-	no_errors	TMEM132C	HGNC	ENSG00000181234	tier1	-	-	38	0	0.00	25	13	34.21
GPRIN1	0	genome.wustl.edu	37	5	176025084	176025084	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	5	176025084	176025084	C	T	SNP	GPRIN1	ENST00000303991	human	ensembl	74_37	-1	known	silent	c.1752	p.P584	0.000	NULL	NULL	-	no_errors	GPRIN1	HGNC	ENSG00000169258	tier1	-	-	57	0	0.00	54	13	19.40
GLIS2	0	genome.wustl.edu	37	16	4387501	4387501	+	Silent	SNP	G	G	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	4387501	4387501	G	C	SNP	GLIS2	ENST00000262366	human	ensembl	74_37	+1	known	silent	c.1551	p.L517	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLIS2	HGNC	ENSG00000126603	tier1	-	-	70	0	0.00	41	7	14.58
KNTC1	0	genome.wustl.edu	37	12	123014670	123014670	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	123014670	123014670	C	T	SNP	KNTC1	ENST00000333479	human	ensembl	74_37	+1	known	silent	c.60	p.V20	0.903	NULL	pfam_RZZ-complex_KNTC1/ROD_C,superfamily_Quino_amine_DH_bsu,superfamily_WD40_repeat_dom,superfamily_PAH	-	no_errors	KNTC1	HGNC	ENSG00000184445	tier1	-	-	89	0	0.00	80	34	29.82
ACVR2B	0	genome.wustl.edu	37	3	38524696	38524696	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	38524696	38524696	C	T	SNP	ACVR2B	ENST00000352511	human	ensembl	74_37	+1	known	missense	c.1412	p.A471V	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2B	HGNC	ENSG00000114739	tier1	-	-	58	0	0.00	32	14	30.43
OR2T11	0	genome.wustl.edu	37	1	248789924	248789924	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	248789924	248789924	C	T	SNP	OR2T11	ENST00000330803	human	ensembl	74_37	-1	known	missense	c.506	p.R169Q	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T11	HGNC	ENSG00000183130	tier1	-	-	28	0	0.00	11	10	47.62
C1orf21	0	genome.wustl.edu	37	1	184588668	184588668	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	184588668	184588668	C	T	SNP	C1orf21	ENST00000235307	human	ensembl	74_37	+1	known	missense	c.344	p.S115L	1.000	NULL	NULL	-	no_errors	C1orf21	HGNC	ENSG00000116667	tier1	-	-	62	0	0.00	45	18	27.69
NSUN5P2	0	genome.wustl.edu	37	7	72420467	72420467	+	RNA	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	72420467	72420467	G	A	SNP	NSUN5P2	ENST00000388955	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.264	-	-	-	no_errors	NSUN5P2	HGNC	ENSG00000106133	tier1	-	-	47	0	0.00	51	7	12.07
MMP19	0	genome.wustl.edu	37	12	56231653	56231653	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	56231653	56231653	C	T	SNP	MMP19	ENST00000322569	human	ensembl	74_37	-1	known	missense	c.1034	p.R345Q	1.000	pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat,pirsf_Pept_M10A_Metazoans	pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,pirsf_Pept_M10A_Metazoans,prints_Pept_M10A	-	no_errors	MMP19	HGNC	ENSG00000123342	tier1	-	-	77	0	0.00	41	18	30.51
OMP	0	genome.wustl.edu	37	11	76814248	76814248	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	76814248	76814248	C	T	SNP	OMP	ENST00000529803	human	ensembl	74_37	+1	known	silent	c.363	p.D121	0.848	pfam_Olfactory_marker,superfamily_Olfactory_marker	pfam_Olfactory_marker,superfamily_Olfactory_marker	-	no_errors	OMP	HGNC	ENSG00000254550	tier1	-	-	42	0	0.00	27	13	32.50
DTWD1	0	genome.wustl.edu	37	15	49917553	49917553	+	Silent	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	49917553	49917553	T	C	SNP	DTWD1	ENST00000251250	human	ensembl	74_37	+1	known	silent	c.189	p.G63	0.941	NULL	pfam_DTW	-	no_errors	DTWD1	HGNC	ENSG00000104047	tier1	-	-	139	0	0.00	92	42	31.34
TCEA2	0	genome.wustl.edu	37	20	62694686	62694686	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	62694686	62694686	G	C	SNP	TCEA2	ENST00000343484	human	ensembl	74_37	+1	known	missense	c.21	p.E7D	1.000	superfamily_TFIIS_N,pirsf_TF_IIS-rel,tigrfam_TFSII	pfam_TFIIS_cen_dom,pfam_TFIIS_N,pfam_Znf_TFIIS,superfamily_TFIIS_cen_dom,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,smart_TFS2M,smart_Znf_TFIIS,pirsf_TF_IIS-rel,pfscan_Znf_TFIIS,tigrfam_TFSII	-	no_errors	TCEA2	HGNC	ENSG00000171703	tier1	-	-	30	0	0.00	2	6	75.00
MNAT1	0	genome.wustl.edu	37	14	61285544	61285544	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	14	61285544	61285544	G	A	SNP	MNAT1	ENST00000261245	human	ensembl	74_37	+1	known	silent	c.666	p.T222	0.127	pirsf_MAT1/Tfb3,pfam_Cdk-activating_kinase_MAT1_cen,tigrfam_MAT1/Tfb3	pirsf_MAT1/Tfb3,pfam_Cdk-activating_kinase_MAT1_cen,smart_Znf_RING,pfscan_Ubiquitin-int_motif,pfscan_Znf_RING,tigrfam_MAT1/Tfb3	-	no_errors	MNAT1	HGNC	ENSG00000020426	tier1	rs143441995	-	80	0	0.00	42	21	33.33
KIF4B	0	genome.wustl.edu	37	5	154396339	154396339	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	5	154396339	154396339	C	T	SNP	KIF4B	ENST00000435029	human	ensembl	74_37	+1	known	nonsense	c.2920	p.R974*	0.502	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF4B	HGNC	ENSG00000226650	tier1	-	-	48	0	0.00	50	22	30.56
MAMDC2	0	genome.wustl.edu	37	9	72758568	72758568	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	72758568	72758568	C	T	SNP	MAMDC2	ENST00000377182	human	ensembl	74_37	+1	known	missense	c.1237	p.R413C	1.000	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom,prints_MAM_dom	-	no_errors	MAMDC2	HGNC	ENSG00000165072	tier1	-	-	53	0	0.00	57	11	16.18
ENSG00000222012	0	genome.wustl.edu	37	7	157408190	157408190	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	157408190	157408190	G	A	SNP	ENSG00000222012	ENST00000409610	human	ensembl	74_37	+1	putative	silent	c.183	p.S61	0.000	NULL	NULL	-	no_errors	AC005481.5	Clone_based_vega_gene	ENSG00000222012	tier1	-	-	70	0	0.00	62	20	24.39
ZIM3	0	genome.wustl.edu	37	19	57646928	57646928	+	Silent	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	57646928	57646928	G	T	SNP	ZIM3	ENST00000269834	human	ensembl	74_37	-1	known	silent	c.777	p.A259	0.983	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZIM3	HGNC	ENSG00000141946	tier1	-	-	48	0	0.00	36	4	10.00
LINC00085	0	genome.wustl.edu	37	19	52196888	52196888	+	RNA	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	52196888	52196888	C	T	SNP	LINC00085	ENST00000573266	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.332	-	-	-	no_errors	LINC00085	HGNC	ENSG00000182310	tier1	-	-	29	0	0.00	16	9	36.00
TOP3B	0	genome.wustl.edu	37	22	22313572	22313572	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	22	22313572	22313572	G	A	SNP	TOP3B	ENST00000357179	human	ensembl	74_37	-1	known	missense	c.1837	p.P613S	1.000	superfamily_Topo_IA_core_domain	pfam_Topo_IA_cen,pfam_Toprim_domain,superfamily_Topo_IA_core_domain,smart_Toprim_domain,smart_Topo_IA_2,smart_Topo_IA_DNA-bd,prints_Topo_IA	-	no_errors	TOP3B	HGNC	ENSG00000100038	tier1	-	-	32	0	0.00	20	11	35.48
LOC100129461	0	genome.wustl.edu	37	6	5030298	5030298	+	RNA	SNP	C	C	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	5030298	5030298	C	A	SNP	LOC100129461	ENST00000606761	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-428J1.5	Clone_based_vega_gene	ENSG00000272142	tier1	-	-	23	0	0.00	5	9	64.29
OR6N1	0	genome.wustl.edu	37	1	158736114	158736114	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	158736114	158736114	T	C	SNP	OR6N1	ENST00000335094	human	ensembl	74_37	-1	known	missense	c.359	p.Y120C	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6N1	HGNC	ENSG00000197403	tier1	-	-	48	0	0.00	37	10	21.28
PTPN5	0	genome.wustl.edu	37	11	18762166	18762166	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	18762166	18762166	A	G	SNP	PTPN5	ENST00000358540	human	ensembl	74_37	-1	known	missense	c.899	p.L300P	1.000	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_KIM-con,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN5	HGNC	ENSG00000110786	tier1	-	-	40	0	0.00	35	9	20.45
NEDD4	0	genome.wustl.edu	37	15	56164658	56164658	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	56164658	56164658	A	G	SNP	NEDD4	ENST00000508342	human	ensembl	74_37	-1	known	missense	c.1616	p.L539S	1.000	superfamily_C2_dom	pfam_HECT,pfam_WW_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_WW_dom	-	no_errors	NEDD4	HGNC	ENSG00000069869	tier1	-	-	133	0	0.00	158	46	22.55
IGSF9B	0	genome.wustl.edu	37	11	133781869	133781869	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	133781869	133781869	C	T	SNP	IGSF9B	ENST00000533871	human	ensembl	74_37	-1	putative	silent	c.4017	p.A1339	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF9B	HGNC	ENSG00000080854	tier1	-	-	51	0	0.00	12	11	47.83
RELL2	0	genome.wustl.edu	37	5	141019123	141019123	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	5	141019123	141019123	G	A	SNP	RELL2	ENST00000297164	human	ensembl	74_37	+1	known	missense	c.410	p.R137H	0.998	NULL	pfam_TNF_rcpt_RELT	-	no_errors	RELL2	HGNC	ENSG00000164620	tier1	rs139014914	-	82	0	0.00	44	20	31.25
MAP3K6	0	genome.wustl.edu	37	1	27684949	27684949	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	27684949	27684949	G	A	SNP	MAP3K6	ENST00000357582	human	ensembl	74_37	-1	known	missense	c.2737	p.R913C	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K6	HGNC	ENSG00000142733	tier1	-	-	52	0	0.00	40	15	27.27
MPDZ	0	genome.wustl.edu	37	9	13150632	13150632	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	13150632	13150632	G	A	SNP	MPDZ	ENST00000319217	human	ensembl	74_37	-1	known	nonsense	c.3508	p.R1170*	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186	tier1	rs200131423	-	71	0	0.00	35	14	28.57
TPD52L2	0	genome.wustl.edu	37	20	62500659	62500659	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	62500659	62500659	G	A	SNP	TPD52L2	ENST00000217121	human	ensembl	74_37	+1	known	silent	c.30	p.L10	1.000	NULL	pfam_TPD52	-	no_errors	TPD52L2	HGNC	ENSG00000101150	tier1	-	-	69	0	0.00	54	16	22.86
SP4	0	genome.wustl.edu	37	7	21516784	21516784	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	21516784	21516784	C	T	SNP	SP4	ENST00000222584	human	ensembl	74_37	+1	known	missense	c.1766	p.T589M	0.988	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP4	HGNC	ENSG00000105866	tier1	-	-	57	0	0.00	51	15	22.73
INSC	0	genome.wustl.edu	37	11	15197525	15197525	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	15197525	15197525	C	T	SNP	INSC	ENST00000379554	human	ensembl	74_37	+1	known	missense	c.436	p.R146C	1.000	NULL	superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	INSC	HGNC	ENSG00000188487	tier1	-	-	31	0	0.00	11	6	35.29
FLJ44006	0	genome.wustl.edu	37	2	111857883	111857883	+	RNA	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	111857883	111857883	C	T	SNP	FLJ44006	ENST00000376593	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC096670.3	Clone_based_vega_gene	ENSG00000204581	tier1	-	-	54	0	0.00	33	15	31.25
CNTNAP3	0	genome.wustl.edu	37	9	39099915	39099915	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	39099915	39099915	G	A	SNP	CNTNAP3	ENST00000297668	human	ensembl	74_37	-1	known	silent	c.2988	p.C996	0.759	superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP3	HGNC	ENSG00000106714	tier1	-	-	119	0	0.00	120	48	28.40
MTHFD2L	0	genome.wustl.edu	37	4	75040309	75040309	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	4	75040309	75040309	T	C	SNP	MTHFD2L	ENST00000395759	human	ensembl	74_37	+1	known	missense	c.230	p.L77P	0.996	pfam_THF_DH/CycHdrlase_cat_dom	pfam_THF_DH/CycHdrlase_NAD-bd_dom,pfam_THF_DH/CycHdrlase_cat_dom,prints_THF_DH/CycHdrlase	-	no_errors	MTHFD2L	HGNC	ENSG00000163738	tier1	-	-	113	0	0.00	91	29	24.17
AXIN1	0	genome.wustl.edu	37	16	396193	396193	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	396193	396193	G	A	SNP	AXIN1	ENST00000262320	human	ensembl	74_37	-1	known	missense	c.833	p.P278L	1.000	NULL	pfam_DIX,pfam_RGS_dom,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	AXIN1	HGNC	ENSG00000103126	tier1	rs147515329	-	48	0	0.00	20	11	35.48
MIR517A	0	genome.wustl.edu	37	19	54215555	54215555	+	RNA	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	54215555	54215555	T	C	SNP	MIR517A	ENST00000385001	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.134	-	-	-	no_errors	MIR517A	HGNC	ENSG00000207734	tier1	-	-	112	0	0.00	79	22	21.78
AP1M2	0	genome.wustl.edu	37	19	10692454	10692454	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	10692454	10692454	G	T	SNP	AP1M2	ENST00000590923	human	ensembl	74_37	-1	known	missense	c.368	p.P123Q	1.000	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom,pirsf_Clathrin_mu,prints_Clathrin_mu	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C,prints_Clathrin_mu	-	no_errors	AP1M2	HGNC	ENSG00000129354	tier1	-	-	46	0	0.00	38	15	28.30
NSG1	0	genome.wustl.edu	37	4	4411344	4411344	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	4	4411344	4411344	C	T	SNP	NSG1	ENST00000397958	human	ensembl	74_37	+1	known	silent	c.291	p.V97	0.996	pfam_Calcyon_neuron-sp,pirsf_Calcyon_neuron-sp	pfam_Calcyon_neuron-sp,pirsf_Calcyon_neuron-sp	-	no_errors	NSG1	Uniprot_gn	ENSG00000168824	tier1	-	-	51	0	0.00	32	15	31.91
USP36	0	genome.wustl.edu	37	17	76818061	76818061	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	76818061	76818061	T	C	SNP	USP36	ENST00000312010	human	ensembl	74_37	-1	known	missense	c.715	p.T239A	0.984	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP36	HGNC	ENSG00000055483	tier1	-	-	80	0	0.00	56	22	28.21
LOC63930	0	genome.wustl.edu	37	20	61711624	61711624	+	RNA	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	61711624	61711624	C	T	SNP	LOC63930	ENST00000607802	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	RP11-305P22.9	Clone_based_vega_gene	ENSG00000272259	tier1	-	-	34	0	0.00	41	8	16.33
TSNAX	0	genome.wustl.edu	37	1	231696971	231696971	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	231696971	231696971	G	A	SNP	TSNAX	ENST00000366639	human	ensembl	74_37	+1	known	silent	c.465	p.T155	0.158	pfam_Translin,superfamily_Translin	pfam_Translin,superfamily_Translin	-	no_errors	TSNAX	HGNC	ENSG00000116918	tier1	-	-	86	0	0.00	93	29	23.77
NLRP2	0	genome.wustl.edu	37	19	55494501	55494501	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	55494501	55494501	G	A	SNP	NLRP2	ENST00000448584	human	ensembl	74_37	+1	known	missense	c.1435	p.D479N	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP2	HGNC	ENSG00000022556	tier1	rs143361632	-	35	0	0.00	19	10	34.48
SPATA22	0	genome.wustl.edu	37	17	3366054	3366054	+	Silent	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	3366054	3366054	G	T	SNP	SPATA22	ENST00000397168	human	ensembl	74_37	-1	known	silent	c.180	p.A60	1.000	NULL	NULL	-	no_errors	SPATA22	HGNC	ENSG00000141255	tier1	-	-	66	0	0.00	47	26	35.62
LOC100127983	0	genome.wustl.edu	37	8	91973050	91973050	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	8	91973050	91973050	G	A	SNP	LOC100127983	ENST00000517562	human	ensembl	74_37	-1	putative	silent	c.250	p.L84	1.000	NULL	NULL	-	no_errors	RP11-122A3.2	Clone_based_vega_gene	ENSG00000253250	tier1	-	-	139	0	0.00	114	39	25.49
STARD9	0	genome.wustl.edu	37	15	42977276	42977276	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	42977276	42977276	G	A	SNP	STARD9	ENST00000290607	human	ensembl	74_37	+1	known	missense	c.3500	p.R1167H	0.000	NULL	pfam_Kinesin_motor_dom,pfam_START_lipid-bd_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_START_lipid-bd_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	STARD9	HGNC	ENSG00000159433	tier1	-	-	34	0	0.00	35	8	18.60
CASZ1	0	genome.wustl.edu	37	1	10703232	10703232	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	10703232	10703232	G	A	SNP	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	silent	c.4005	p.R1335	0.107	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940	tier1	-	-	106	0	0.00	50	14	21.88
BCHE	0	genome.wustl.edu	37	3	165547451	165547451	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	165547451	165547451	C	T	SNP	BCHE	ENST00000264381	human	ensembl	74_37	-1	known	silent	c.1371	p.P457	0.995	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AChE_tetra,pfam_AB_hydrolase_3,prints_Cholinesterase	-	no_errors	BCHE	HGNC	ENSG00000114200	tier1	-	-	68	0	0.00	47	17	26.56
SEPT12	0	genome.wustl.edu	37	16	4833438	4833438	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	4833438	4833438	C	T	SNP	SEPT12	ENST00000587603	human	ensembl	74_37	-1	known	missense	c.751	p.G251R	0.000	pirsf_Septin	pfam_Cell_div_GTP-bd,pfam_AIG1,pfam_Cell_div_FtsK/SpoIIIE,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT12	HGNC	ENSG00000140623	tier1	-	-	69	0	0.00	31	19	38.00
EPHA7	0	genome.wustl.edu	37	6	93967917	93967917	+	Silent	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	93967917	93967917	A	G	SNP	EPHA7	ENST00000369303	human	ensembl	74_37	-1	known	silent	c.2010	p.G670	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA7	HGNC	ENSG00000135333	tier1	-	-	96	0	0.00	51	28	35.44
VPS13D	0	genome.wustl.edu	37	1	12568965	12568965	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	12568965	12568965	G	T	SNP	VPS13D	ENST00000358136	human	ensembl	74_37	+1	known	missense	c.13054	p.V4352F	1.000	NULL	pfam_VPSAP_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	VPS13D	HGNC	ENSG00000048707	tier1	-	-	54	0	0.00	45	4	8.16
SNHG14	0	genome.wustl.edu	37	15	25334989	25334989	+	RNA	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	25334989	25334989	G	A	SNP	SNHG14	ENST00000546682	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078	tier1	-	-	38	0	0.00	42	7	14.29
PPP1R16A	0	genome.wustl.edu	37	8	145722812	145722812	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	8	145722812	145722812	G	A	SNP	PPP1R16A	ENST00000292539	human	ensembl	74_37	+1	known	missense	c.235	p.A79T	0.998	superfamily_Ankyrin_rpt-contain_dom,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PPP1R16A	HGNC	ENSG00000160972	tier1	-	-	52	0	0.00	36	12	25.00
SMARCAL1	0	genome.wustl.edu	37	2	217315650	217315650	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	217315650	217315650	C	T	SNP	SMARCAL1	ENST00000357276	human	ensembl	74_37	+1	known	missense	c.1933	p.R645C	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase	pfam_HARP_dom,pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCAL1	HGNC	ENSG00000138375	tier1	rs119473037	-	30	0	0.00	9	6	40.00
BDKRB1	0	genome.wustl.edu	37	14	96730713	96730713	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	14	96730713	96730713	C	T	SNP	BDKRB1	ENST00000216629	human	ensembl	74_37	+1	known	missense	c.694	p.R232W	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Brdyknn_1_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Brdyknn_1_rcpt,prints_GPCR_Rhodpsn,prints_Brdyknn_rcpt	-	no_errors	BDKRB1	HGNC	ENSG00000100739	tier1	-	-	38	0	0.00	19	13	40.62
URI1	0	genome.wustl.edu	37	19	30505904	30505904	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	30505904	30505904	G	A	SNP	URI1	ENST00000542441	human	ensembl	74_37	+1	known	silent	c.1536	p.L512	0.723	NULL	pfam_Prefoldin_subunit_alpha,superfamily_Prefoldin	-	no_errors	URI1	HGNC	ENSG00000105176	tier1	-	-	59	0	0.00	46	10	17.86
RGSL1	0	genome.wustl.edu	37	1	182496778	182496778	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	182496778	182496778	C	T	SNP	RGSL1	ENST00000294854	human	ensembl	74_37	+1	known	missense	c.1996	p.R666W	1.000	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam	-	no_errors	RGSL1	HGNC	ENSG00000121446	tier1	-	-	74	0	0.00	75	19	20.21
PVR	0	genome.wustl.edu	37	19	45150757	45150757	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	45150757	45150757	C	T	SNP	PVR	ENST00000425690	human	ensembl	74_37	+1	known	silent	c.342	p.R114	0.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PVR	HGNC	ENSG00000073008	tier1	-	-	41	0	0.00	32	12	27.27
TFAP4	0	genome.wustl.edu	37	16	4312668	4312668	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	4312668	4312668	G	A	SNP	TFAP4	ENST00000204517	human	ensembl	74_37	-1	known	missense	c.124	p.R42W	1.000	superfamily_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TFAP4	HGNC	ENSG00000090447	tier1	-	-	26	0	0.00	12	5	29.41
MYT1L	0	genome.wustl.edu	37	2	1796148	1796148	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	1796148	1796148	G	A	SNP	MYT1L	ENST00000399161	human	ensembl	74_37	-1	known	missense	c.3365	p.A1122V	1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1L	HGNC	ENSG00000186487	tier1	-	-	24	0	0.00	25	11	30.56
CCDC116	0	genome.wustl.edu	37	22	21988606	21988606	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	22	21988606	21988606	G	A	SNP	CCDC116	ENST00000292779	human	ensembl	74_37	+1	known	missense	c.368	p.R123Q	0.000	NULL	NULL	-	no_errors	CCDC116	HGNC	ENSG00000161180	tier1	-	-	52	0	0.00	29	12	29.27
SPTA1	0	genome.wustl.edu	37	1	158644426	158644426	+	Silent	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	158644426	158644426	G	T	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	silent	c.1152	p.G384	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554	tier1	-	-	38	0	0.00	35	4	10.26
ARID3B	0	genome.wustl.edu	37	15	74883522	74883522	+	Silent	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	74883522	74883522	T	C	SNP	ARID3B	ENST00000346246	human	ensembl	74_37	+1	known	silent	c.912	p.C304	1.000	superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID3B	HGNC	ENSG00000179361	tier1	-	-	63	0	0.00	57	16	21.62
DEDD	0	genome.wustl.edu	37	1	161093976	161093976	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	161093976	161093976	T	C	SNP	DEDD	ENST00000368005	human	ensembl	74_37	-1	known	missense	c.277	p.T93A	1.000	pfam_DED,superfamily_DEATH-like_dom,smart_DED,pfscan_DED	pfam_DED,superfamily_DEATH-like_dom,smart_DED,pfscan_DED	-	no_errors	DEDD	HGNC	ENSG00000158796	tier1	-	-	28	0	0.00	27	10	27.03
HMGCS2	0	genome.wustl.edu	37	1	120301801	120301801	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	120301801	120301801	G	A	SNP	HMGCS2	ENST00000369406	human	ensembl	74_37	-1	known	missense	c.790	p.R264W	0.932	pfam_HMG_CoA_synt_C,superfamily_Thiolase-like,tigrfam_HMG_CoA_synthase_euk	pfam_HMG_CoA_synt_C,pfam_HMG_CoA_synth_N,superfamily_Thiolase-like,tigrfam_HMG_CoA_synthase_euk	-	no_errors	HMGCS2	HGNC	ENSG00000134240	tier1	-	-	66	0	0.00	57	19	25.00
PCYOX1	0	genome.wustl.edu	37	2	70486511	70486511	+	Silent	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	70486511	70486511	T	C	SNP	PCYOX1	ENST00000433351	human	ensembl	74_37	+1	known	silent	c.132	p.I44	0.997	pfam_FAD-dep_OxRdtase,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pirsf_Prenylcysteine_Oxase	pfam_Prenylcys_lyase,pfam_FAD-dep_OxRdtase,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Amino_oxidase,pirsf_Prenylcysteine_Oxase	-	no_errors	PCYOX1	HGNC	ENSG00000116005	tier1	-	-	88	0	0.00	81	21	20.59
C1orf27	0	genome.wustl.edu	37	1	186360840	186360840	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	186360840	186360840	C	T	SNP	C1orf27	ENST00000287859	human	ensembl	74_37	+1	known	missense	c.628	p.R210C	0.944	NULL	NULL	-	no_errors	C1orf27	HGNC	ENSG00000157181	tier1	-	-	94	0	0.00	90	37	29.13
BAI1	0	genome.wustl.edu	37	8	143562626	143562626	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	8	143562626	143562626	C	T	SNP	BAI1	ENST00000323289	human	ensembl	74_37	+1	known	nonsense	c.1840	p.R614*	0.995	smart_GPCR_2_extracellular_dom,prints_GPCR_2_brain-spec_angio_inhib,pfscan_GPCR_2_extracellular_dom	pfam_GPCR_2_secretin-like,pfam_Thrombospondin_1_rpt,pfam_DUF3497,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	BAI1	HGNC	ENSG00000181790	tier1	-	-	80	0	0.00	53	23	30.26
CELSR3	0	genome.wustl.edu	37	3	48688438	48688438	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	48688438	48688438	G	A	SNP	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	missense	c.6257	p.S2086L	1.000	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300	tier1	-	-	44	0	0.00	17	10	37.04
LINC00623	0	genome.wustl.edu	37	1	149576483	149576483	+	RNA	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	149576483	149576483	G	A	SNP	LINC00623	ENST00000455295	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-353N4.6	Clone_based_vega_gene	ENSG00000269501	tier1	-	-	21	0	0.00	16	4	20.00
MKNK2	0	genome.wustl.edu	37	19	2041986	2041986	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	2041986	2041986	G	A	SNP	MKNK2	ENST00000250896	human	ensembl	74_37	-1	known	silent	c.798	p.S266	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MKNK2	HGNC	ENSG00000099875	tier1	-	-	58	0	0.00	27	10	26.32
PRDM1	0	genome.wustl.edu	37	6	106552838	106552838	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	106552838	106552838	G	A	SNP	PRDM1	ENST00000369096	human	ensembl	74_37	+1	known	missense	c.803	p.R268H	0.002	pirsf_Znf_PRDM1	pfam_Znf_C2H2,pfam_SET_dom,smart_SET_dom,smart_Znf_C2H2-like,pirsf_Znf_PRDM1,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM1	HGNC	ENSG00000057657	tier1	-	-	110	0	0.00	101	25	19.84
DAB1	0	genome.wustl.edu	37	1	57480999	57480999	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	57480999	57480999	G	A	SNP	DAB1	ENST00000371231	human	ensembl	74_37	-1	known	missense	c.1100	p.P367L	0.991	NULL	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	DAB1	HGNC	ENSG00000173406	tier1	-	-	46	0	0.00	29	4	12.12
FAM83A-AS1	0	genome.wustl.edu	37	8	124214732	124214732	+	RNA	SNP	T	T	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	8	124214732	124214732	T	G	SNP	FAM83A-AS1	ENST00000517519	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	FAM83A-AS1	HGNC	ENSG00000204949	tier1	-	-	89	0	0.00	76	22	22.45
SLC5A2	0	genome.wustl.edu	37	16	31501714	31501714	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	31501714	31501714	C	T	SNP	SLC5A2	ENST00000330498	human	ensembl	74_37	+1	known	missense	c.1877	p.P626L	0.005	NULL	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A2	HGNC	ENSG00000140675	tier1	-	-	37	0	0.00	18	12	40.00
PLA2G4F	0	genome.wustl.edu	37	15	42444923	42444923	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	42444923	42444923	C	T	SNP	PLA2G4F	ENST00000397272	human	ensembl	74_37	-1	known	silent	c.564	p.T188	0.006	NULL	pfam_LysoPLipase_cat_dom,pfam_C2_dom,superfamily_Acyl_Trfase/lysoPLipase,superfamily_C2_dom,smart_C2_dom,smart_LysoPLipase_cat_dom,pfscan_C2_dom,pfscan_LysoPLipase_cat_dom	-	no_errors	PLA2G4F	HGNC	ENSG00000168907	tier1	-	-	17	0	0.00	17	5	22.73
MRPS30	0	genome.wustl.edu	37	5	44811183	44811183	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	5	44811183	44811183	G	A	SNP	MRPS30	ENST00000507110	human	ensembl	74_37	+1	known	missense	c.674	p.R225Q	0.995	pfam_Ribosomal_L37/S30	pfam_Ribosomal_L37/S30	-	no_errors	MRPS30	HGNC	ENSG00000112996	tier1	-	-	137	0	0.00	119	49	29.17
OR4D10	0	genome.wustl.edu	37	11	59245410	59245410	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	59245410	59245410	G	A	SNP	OR4D10	ENST00000530162	human	ensembl	74_37	+1	known	missense	c.508	p.G170R	0.923	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4D10	HGNC	ENSG00000254466	tier1	rs201321935	-	53	0	0.00	30	6	16.67
KIF14	0	genome.wustl.edu	37	1	200572974	200572974	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	200572974	200572974	C	T	SNP	KIF14	ENST00000367350	human	ensembl	74_37	-1	known	missense	c.1856	p.R619Q	0.978	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF14	HGNC	ENSG00000118193	tier1	-	-	67	0	0.00	39	29	42.65
MCM9	0	genome.wustl.edu	37	6	119136219	119136219	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	119136219	119136219	G	A	SNP	MCM9	ENST00000316316	human	ensembl	74_37	-1	known	missense	c.3200	p.S1067L	0.013	NULL	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,smart_AAA+_ATPase,prints_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase	-	no_errors	MCM9	HGNC	ENSG00000111877	tier1	-	-	21	0	0.00	9	7	43.75
SLC52A2	0	genome.wustl.edu	37	8	145581176	145581176	+	RNA	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	8	145581176	145581176	G	A	SNP	SLC52A2	ENST00000532815	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.939	-	-	-	no_errors	SLC52A2	HGNC	ENSG00000185803	tier1	-	-	22	0	0.00	14	8	36.36
FTCD	0	genome.wustl.edu	37	21	47556290	47556290	+	RNA	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	21	47556290	47556290	C	T	SNP	FTCD	ENST00000460011	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FTCD	HGNC	ENSG00000160282	tier1	-	-	31	0	0.00	14	5	26.32
CPB1	0	genome.wustl.edu	37	3	148558511	148558511	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	148558511	148558511	A	G	SNP	CPB1	ENST00000282957	human	ensembl	74_37	+1	known	missense	c.311	p.Q104R	1.000	pfam_Prot_inh_M14A,superfamily_Prot_inh_propept	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPB1	HGNC	ENSG00000153002	tier1	-	-	106	0	0.00	83	29	25.89
SLITRK6	0	genome.wustl.edu	37	13	86368334	86368334	+	Silent	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	13	86368334	86368334	T	C	SNP	SLITRK6	ENST00000400286	human	ensembl	74_37	-1	known	silent	c.2310	p.G770	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK6	HGNC	ENSG00000184564	tier1	-	-	44	0	0.00	23	7	23.33
FGD5	0	genome.wustl.edu	37	3	14949206	14949206	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	14949206	14949206	C	T	SNP	FGD5	ENST00000285046	human	ensembl	74_37	+1	known	silent	c.3324	p.L1108	1.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD5	HGNC	ENSG00000154783	tier1	-	-	77	0	0.00	315	39	11.02
KCNC4	0	genome.wustl.edu	37	1	110765809	110765809	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	110765809	110765809	T	C	SNP	KCNC4	ENST00000369787	human	ensembl	74_37	+1	known	missense	c.902	p.V301A	1.000	pfam_Ion_trans_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_K_chnl_volt-dep_Kv3_ID,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv3.4,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9	-	no_errors	KCNC4	HGNC	ENSG00000116396	tier1	-	-	13	0	0.00	19	5	20.83
COPB2	0	genome.wustl.edu	37	3	139108396	139108396	+	RNA	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	139108396	139108396	T	C	SNP	COPB2	ENST00000510491	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.960	-	-	-	no_errors	COPB2	HGNC	ENSG00000184432	tier1	-	-	252	0	0.00	154	67	30.32
NUP54	0	genome.wustl.edu	37	4	77065350	77065350	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	4	77065350	77065350	T	C	SNP	NUP54	ENST00000264883	human	ensembl	74_37	-1	known	missense	c.247	p.T83A	1.000	NULL	NULL	-	no_errors	NUP54	HGNC	ENSG00000138750	tier1	-	-	88	0	0.00	61	21	25.61
AHNAK2	0	genome.wustl.edu	37	14	105420418	105420418	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	14	105420418	105420418	C	T	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.1370	p.S457N	0.011	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	tier1	-	-	40	0	0.00	18	7	28.00
TNC	0	genome.wustl.edu	37	9	117825395	117825395	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	117825395	117825395	C	T	SNP	TNC	ENST00000350763	human	ensembl	74_37	-1	known	silent	c.3834	p.T1278	0.520	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNC	HGNC	ENSG00000041982	tier1	rs150370072	-	33	0	0.00	30	11	26.83
ALPP	0	genome.wustl.edu	37	2	233246473	233246475	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	233246473	233246475	CTG	-	DEL	ALPP	ENST00000392027	human	ensembl	74_37	+1	known	in_frame_del	c.1576_1578	p.L529in_frame_del	0.007:0.103:0.307	NULL	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase,prints_Alkaline_phosphatase	-	no_errors	ALPP	HGNC	ENSG00000163283	tier1			21	0	0.00	18	3	14.29
SYNE2	0	genome.wustl.edu	37	14	64430701	64430701	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	14	64430701	64430701	T	C	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.973	p.Y325H	0.992	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	tier1	-	-	134	0	0.00	80	32	28.57
LATS2	0	genome.wustl.edu	37	13	21563156	21563156	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	13	21563156	21563156	G	A	SNP	LATS2	ENST00000382592	human	ensembl	74_37	-1	known	missense	c.763	p.R255W	0.999	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	LATS2	HGNC	ENSG00000150457	tier1	-	-	17	0	0.00	11	9	42.86
ARID3B	0	genome.wustl.edu	37	15	74883953	74883953	+	Silent	SNP	C	C	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	74883953	74883953	C	A	SNP	ARID3B	ENST00000346246	human	ensembl	74_37	+1	known	silent	c.1218	p.P406	0.002	NULL	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID3B	HGNC	ENSG00000179361	tier1	-	-	35	0	0.00	24	6	20.00
CDIPT	0	genome.wustl.edu	37	16	29872575	29872575	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	29872575	29872575	G	A	SNP	CDIPT	ENST00000219789	human	ensembl	74_37	-1	known	missense	c.184	p.R62W	1.000	pfam_CDP-OH_P_trans,pirsf_CDP_diag_ino_3_P_euk	pfam_CDP-OH_P_trans,pirsf_CDP_diag_ino_3_P_euk	-	no_errors	CDIPT	HGNC	ENSG00000103502	tier1	rs150782987	-	79	0	0.00	41	11	21.15
COL1A1	0	genome.wustl.edu	37	17	48266268	48266268	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	48266268	48266268	C	T	SNP	COL1A1	ENST00000225964	human	ensembl	74_37	-1	known	missense	c.3041	p.R1014H	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL1A1	HGNC	ENSG00000108821	tier1	-	-	41	0	0.00	27	6	18.18
ZMYM3	0	genome.wustl.edu	37	X	70464289	70464289	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	X	70464289	70464289	C	T	SNP	ZMYM3	ENST00000373988	human	ensembl	74_37	-1	known	missense	c.3149	p.C1050Y	1.000	NULL	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH_dom	-	no_errors	ZMYM3	HGNC	ENSG00000147130	tier1	-	-	46	0	0.00	25	4	13.79
OBSCN	0	genome.wustl.edu	37	1	228506748	228506748	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	228506748	228506748	C	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	silent	c.14295	p.D4765	0.002	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	tier1	-	-	37	0	0.00	22	8	26.67
AGAP11	0	genome.wustl.edu	37	10	88759697	88759697	+	RNA	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	88759697	88759697	C	T	SNP	AGAP11	ENST00000444431	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.475	-	-	-	no_errors	AGAP11	HGNC	ENSG00000151303	tier1	-	-	23	0	0.00	10	6	37.50
MAN2B2	0	genome.wustl.edu	37	4	6602448	6602448	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	4	6602448	6602448	G	A	SNP	MAN2B2	ENST00000285599	human	ensembl	74_37	+1	known	missense	c.1504	p.V502I	0.891	pfam_Glyco_hydro_38_C,superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_38_N,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Gal_mutarotase_SF_dom,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2B2	HGNC	ENSG00000013288	tier1	rs186250763	GMAF=0.0005	40	0	0.00	18	13	41.94
CFH	0	genome.wustl.edu	37	1	196654365	196654365	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	196654365	196654365	C	-	DEL	CFH	ENST00000367429	human	ensembl	74_37	+1	known	frame_shift_del	c.962	p.L322fs	0.001	pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFH	HGNC	ENSG00000000971	tier1			76	0	0.00	62	14	18.42
KNG1	0	genome.wustl.edu	37	3	186450325	186450325	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	186450325	186450325	C	T	SNP	KNG1	ENST00000265023	human	ensembl	74_37	+1	known	silent	c.792	p.C264	0.018	smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat,prints_Kininogen	-	no_errors	KNG1	HGNC	ENSG00000113889	tier1	rs201943382	GMAF=0	61	0	0.00	54	14	20.59
CRHR2	0	genome.wustl.edu	37	7	30728894	30728894	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	30728894	30728894	C	T	SNP	CRHR2	ENST00000348438	human	ensembl	74_37	-1	known	missense	c.97	p.G33R	0.001	NULL	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,prints_GPCR_2_CRF_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_CRF2_rcpt,prints_GPCR_2_diuretic_rcpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	CRHR2	HGNC	ENSG00000106113	tier1	-	-	23	0	0.00	10	4	28.57
ABCA1	0	genome.wustl.edu	37	9	107581064	107581064	+	Silent	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	107581064	107581064	G	T	SNP	ABCA1	ENST00000374736	human	ensembl	74_37	-1	known	silent	c.3342	p.S1114	1.000	smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA1	HGNC	ENSG00000165029	tier1	-	-	47	0	0.00	41	12	22.64
LRP1B	0	genome.wustl.edu	37	2	141201965	141201965	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	141201965	141201965	T	C	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.10228	p.I3410V	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	79	0	0.00	57	20	25.97
MCM4	0	genome.wustl.edu	37	8	48878876	48878876	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	8	48878876	48878876	G	A	SNP	MCM4	ENST00000262105	human	ensembl	74_37	+1	known	missense	c.962	p.R321H	1.000	superfamily_NA-bd_OB-fold,smart_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_4,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM4	HGNC	ENSG00000104738	tier1	-	-	13	0	0.00	13	12	48.00
TLE1	0	genome.wustl.edu	37	9	84228347	84228347	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	84228347	84228347	G	A	SNP	TLE1	ENST00000376499	human	ensembl	74_37	-1	known	silent	c.1008	p.G336	0.927	NULL	pfam_Groucho/TLE_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Groucho_enhance	-	no_errors	TLE1	HGNC	ENSG00000196781	tier1	-	-	62	0	0.00	45	21	31.82
KANK2	0	genome.wustl.edu	37	19	11280774	11280774	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	11280774	11280774	C	T	SNP	KANK2	ENST00000432929	human	ensembl	74_37	-1	known	missense	c.2386	p.A796T	0.713	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_KN_motif,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK2	HGNC	ENSG00000197256	tier1	-	-	32	0	0.00	26	5	16.13
POLR3E	0	genome.wustl.edu	37	16	22337274	22337274	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	22337274	22337274	C	T	SNP	POLR3E	ENST00000299853	human	ensembl	74_37	+1	known	missense	c.1541	p.A514V	0.000	NULL	pfam_RNA_pol_III_Rpc5	-	no_errors	POLR3E	HGNC	ENSG00000058600	tier1	-	-	147	0	0.00	99	41	28.67
LOXHD1	0	genome.wustl.edu	37	18	44121827	44121827	+	Nonsense_Mutation	SNP	A	A	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	18	44121827	44121827	A	T	SNP	LOXHD1	ENST00000536736	human	ensembl	74_37	-1	known	nonsense	c.3825	p.C1275*	1.000	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom	-	no_errors	LOXHD1	HGNC	ENSG00000167210	tier1	-	-	65	0	0.00	38	9	19.15
PDCD11	0	genome.wustl.edu	37	10	105172954	105172954	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	105172954	105172954	C	T	SNP	PDCD11	ENST00000369797	human	ensembl	74_37	+1	known	missense	c.1060	p.R354C	0.005	superfamily_NA-bd_OB-fold	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Suf,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_HAT,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,prints_Ribosomal_S1	-	no_errors	PDCD11	HGNC	ENSG00000148843	tier1	-	-	72	0	0.00	27	11	28.95
PDIA4	0	genome.wustl.edu	37	7	148701072	148701072	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	148701072	148701072	G	A	SNP	PDIA4	ENST00000286091	human	ensembl	74_37	-1	known	silent	c.1752	p.D584	0.934	pirsf_Protein_diS-isomerase_A4,pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,tigrfam_Prot_disulphide_isomerase,tigrfam_Disulphide_isomerase	pirsf_Protein_diS-isomerase_A4,pfam_Thioredoxin_domain,pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,prints_Calsequestrin,tigrfam_Prot_disulphide_isomerase,tigrfam_Disulphide_isomerase	-	no_errors	PDIA4	HGNC	ENSG00000155660	tier1	-	-	73	0	0.00	52	17	24.64
ITGA7	0	genome.wustl.edu	37	12	56091249	56091249	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	56091249	56091249	G	A	SNP	ITGA7	ENST00000555728	human	ensembl	74_37	-1	known	silent	c.1623	p.G541	0.001	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA7	HGNC	ENSG00000135424	tier1	-	-	45	0	0.00	34	8	18.60
POMT2	0	genome.wustl.edu	37	14	77746207	77746208	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	14	77746207	77746208	AC	-	DEL	POMT2	ENST00000261534	human	ensembl	74_37	-1	known	frame_shift_del	c.1850_1849	p.V617fs	0.083:0.002	NULL	pfam_Glyco_trans_39,pfam_MIR_motif,superfamily_MIR_motif,smart_MIR_motif,pfscan_MIR_motif	-	no_errors	POMT2	HGNC	ENSG00000009830	tier1			38	0	0.00	16	2	11.11
IRF2BPL	0	genome.wustl.edu	37	14	77493648	77493650	+	In_Frame_Del	DEL	GCG	GCG	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	GCG	GCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	14	77493648	77493650	GCG	-	DEL	IRF2BPL	ENST00000238647	human	ensembl	74_37	-1	known	in_frame_del	c.488_486	p.A164in_frame_del	0.567:0.583:0.592	pfam_Interferon_reg_fac2-bd1_2_Znf	pfam_Interferon_reg_fac2-bd1_2_Znf	-	no_errors	IRF2BPL	HGNC	ENSG00000119669	tier1			13	0	0.00	16	4	20.00
SAMHD1	0	genome.wustl.edu	37	20	35555586	35555586	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	35555586	35555586	G	A	SNP	SAMHD1	ENST00000262878	human	ensembl	74_37	-1	known	missense	c.695	p.T232M	0.999	pfam_HD_domain,smart_HD/PDEase_dom	pfam_HD_domain,pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,smart_HD/PDEase_dom,pfscan_SAM	-	no_errors	SAMHD1	HGNC	ENSG00000101347	tier1	-	-	74	0	0.00	59	17	22.37
GLRA1	0	genome.wustl.edu	37	5	151202325	151202325	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	5	151202325	151202325	C	T	SNP	GLRA1	ENST00000455880	human	ensembl	74_37	-1	known	missense	c.1283	p.R428H	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_Glycine_rcpt_A,prints_Glycine_rcpt_A1,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GLRA1	HGNC	ENSG00000145888	tier1	-	-	102	0	0.00	86	33	27.73
E4F1	0	genome.wustl.edu	37	16	2284933	2284933	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	2284933	2284933	G	A	SNP	E4F1	ENST00000301727	human	ensembl	74_37	+1	known	silent	c.1866	p.T622	0.002	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	E4F1	HGNC	ENSG00000167967	tier1	-	-	25	0	0.00	14	8	34.78
HYKK	0	genome.wustl.edu	37	15	78805653	78805653	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	78805653	78805653	C	T	SNP	HYKK	ENST00000388988	human	ensembl	74_37	+1	known	missense	c.223	p.P75S	0.001	pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom	pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom	-	no_errors	HYKK	HGNC	ENSG00000188266	tier1	-	-	96	0	0.00	63	20	24.10
FABP4	0	genome.wustl.edu	37	8	82395393	82395393	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	8	82395393	82395393	C	T	SNP	FABP4	ENST00000256104	human	ensembl	74_37	-1	known	missense	c.10	p.A4T	0.506	superfamily_Calycin-like	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Fatty_acid-bd	-	no_errors	FABP4	HGNC	ENSG00000170323	tier1	-	-	44	0	0.00	40	9	18.37
MCM3	0	genome.wustl.edu	37	6	52143550	52143550	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	52143550	52143550	G	T	SNP	MCM3	ENST00000596288	human	ensembl	74_37	-1	known	missense	c.1004	p.T335N	0.833	pfam_MCM_DNA-dep_ATPase,smart_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,smart_AAA+_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_DNA-dep_ATPase,prints_Mcm3	-	no_errors	MCM3	HGNC	ENSG00000112118	tier1	-	-	55	0	0.00	49	5	9.26
TFCP2	0	genome.wustl.edu	37	12	51501087	51501087	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	51501087	51501087	T	-	DEL	TFCP2	ENST00000257915	human	ensembl	74_37	-1	known	frame_shift_del	c.760	p.M254fs	1.000	pfam_CP2	pfam_CP2,superfamily_SAM/pointed	-	no_errors	TFCP2	HGNC	ENSG00000135457	tier1			70	0	0.00	63	12	16.00
ATAD5	0	genome.wustl.edu	37	17	29182214	29182214	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	29182214	29182214	G	A	SNP	ATAD5	ENST00000321990	human	ensembl	74_37	+1	known	missense	c.2504	p.R835H	1.000	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	ATAD5	HGNC	ENSG00000176208	tier1	-	-	48	0	0.00	28	12	30.00
HPS4	0	genome.wustl.edu	37	22	26860178	26860178	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	22	26860178	26860178	C	T	SNP	HPS4	ENST00000398141	human	ensembl	74_37	-1	known	missense	c.1457	p.R486H	0.000	NULL	NULL	-	no_errors	HPS4	HGNC	ENSG00000100099	tier1	rs139039617	-	32	0	0.00	18	5	21.74
ZNF827	0	genome.wustl.edu	37	4	146686150	146686150	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	4	146686150	146686150	C	T	SNP	ZNF827	ENST00000508784	human	ensembl	74_37	-1	known	missense	c.3220	p.G1074S	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF827	HGNC	ENSG00000151612	tier1	rs148875276	-	55	0	0.00	26	15	36.59
ZNF600	0	genome.wustl.edu	37	19	53269192	53269192	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	53269192	53269192	G	A	SNP	ZNF600	ENST00000338230	human	ensembl	74_37	-1	known	missense	c.1817	p.A606V	0.955	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF600	HGNC	ENSG00000189190	tier1	-	-	132	0	0.00	97	45	31.69
SNRNP200	0	genome.wustl.edu	37	2	96970557	96970557	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	96970557	96970557	C	T	SNP	SNRNP200	ENST00000323853	human	ensembl	74_37	-1	known	missense	c.95	p.R32H	1.000	NULL	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SNRNP200	HGNC	ENSG00000144028	tier1	-	-	69	0	0.00	59	35	36.84
SALL3	0	genome.wustl.edu	37	18	76757027	76757027	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	18	76757027	76757027	G	A	SNP	SALL3	ENST00000537592	human	ensembl	74_37	+1	known	missense	c.3608	p.R1203Q	0.999	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463	tier1	-	-	64	0	0.00	65	11	14.47
YIF1A	0	genome.wustl.edu	37	11	66055130	66055130	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	66055130	66055130	G	A	SNP	YIF1A	ENST00000484814	human	ensembl	74_37	-1	known	nonsense	c.154	p.Q52*	1.000	NULL	NULL	-	no_errors	YIF1A	HGNC	ENSG00000174851	tier1	-	-	64	0	0.00	33	21	38.89
PCDHA10	0	genome.wustl.edu	37	5	140235763	140235763	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	5	140235763	140235763	G	A	SNP	PCDHA10	ENST00000307360	human	ensembl	74_37	+1	known	missense	c.130	p.V44M	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA10	HGNC	ENSG00000250120	tier1	-	-	98	0	0.00	66	13	16.46
PDE4DIP	0	genome.wustl.edu	37	1	144890626	144890626	+	RNA	SNP	G	G	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	144890626	144890626	G	C	SNP	PDE4DIP	ENST00000467859	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.801	-	-	-	no_errors	PDE4DIP	HGNC	ENSG00000178104	tier1	-	-	227	0	0.00	171	30	14.93
IGF2BP2	0	genome.wustl.edu	37	3	185407144	185407144	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	185407144	185407144	G	A	SNP	IGF2BP2	ENST00000382199	human	ensembl	74_37	-1	known	missense	c.676	p.R226W	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,pfam_RRM_dom,smart_RRM_dom,smart_KH_dom,pfscan_KH_dom_type_1,pfscan_RRM_dom	-	no_errors	IGF2BP2	HGNC	ENSG00000073792	tier1	-	-	56	0	0.00	30	15	33.33
PKN1	0	genome.wustl.edu	37	19	14561159	14561159	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	14561159	14561159	C	T	SNP	PKN1	ENST00000342216	human	ensembl	74_37	+1	known	missense	c.658	p.R220C	1.000	pfam_HR1_rho-bd,superfamily_HR1_rho-bd,smart_HR1_rho-bd	pfam_Prot_kinase_dom,pfam_HR1_rho-bd,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,superfamily_C2_dom,smart_HR1_rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	PKN1	HGNC	ENSG00000123143	tier1	-	-	83	0	0.00	44	25	36.23
SAFB2	0	genome.wustl.edu	37	19	5616451	5616451	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	5616451	5616451	G	A	SNP	SAFB2	ENST00000252542	human	ensembl	74_37	-1	known	silent	c.321	p.D107	0.410	NULL	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SAFB2	HGNC	ENSG00000130254	tier1	-	-	67	0	0.00	49	13	20.97
C2CD5	0	genome.wustl.edu	37	12	22677416	22677416	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	22677416	22677416	C	T	SNP	C2CD5	ENST00000333957	human	ensembl	74_37	-1	known	silent	c.591	p.S197	0.027	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	C2CD5	HGNC	ENSG00000111731	tier1	-	-	71	0	0.00	48	15	23.81
SCAF8	0	genome.wustl.edu	37	6	155152087	155152087	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	155152087	155152087	G	A	SNP	SCAF8	ENST00000367186	human	ensembl	74_37	+1	known	silent	c.2370	p.P790	0.998	NULL	pfam_RNA_pol_II-bd,pfam_RRM_dom,superfamily_ENTH_VHS,smart_CID_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SCAF8	HGNC	ENSG00000213079	tier1	rs138080868	-	59	0	0.00	47	20	29.85
PTPN4	0	genome.wustl.edu	37	2	120692378	120692378	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	120692378	120692378	G	A	SNP	PTPN4	ENST00000263708	human	ensembl	74_37	+1	known	missense	c.1199	p.R400Q	1.000	pirsf_Tyr_Pase_non-rcpt_typ-3/4	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,pfam_PDZ,pfam_FERM-adjacent,superfamily_FERM_central,superfamily_PDZ,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-3/4,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	PTPN4	HGNC	ENSG00000088179	tier1	-	-	130	0	0.00	116	14	10.77
P4HB	0	genome.wustl.edu	37	17	79804473	79804473	+	Silent	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	79804473	79804473	G	T	SNP	P4HB	ENST00000331483	human	ensembl	74_37	-1	known	silent	c.888	p.T296	0.001	superfamily_Thioredoxin-like_fold,tigrfam_Prot_disulphide_isomerase	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,tigrfam_Prot_disulphide_isomerase,tigrfam_Disulphide_isomerase	-	no_errors	P4HB	HGNC	ENSG00000185624	tier1	-	-	46	0	0.00	42	4	8.70
PRAMEF12	0	genome.wustl.edu	37	1	12835688	12835688	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	12835688	12835688	G	A	SNP	PRAMEF12	ENST00000357726	human	ensembl	74_37	+1	known	missense	c.290	p.R97Q	0.000	NULL	NULL	-	no_errors	PRAMEF12	HGNC	ENSG00000116726	tier1	-	-	102	0	0.00	75	37	33.04
MAN1A1	0	genome.wustl.edu	37	6	119509656	119509656	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	119509656	119509656	G	A	SNP	MAN1A1	ENST00000368468	human	ensembl	74_37	-1	known	missense	c.1633	p.R545W	1.000	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	MAN1A1	HGNC	ENSG00000111885	tier1	-	-	73	0	0.00	59	19	24.36
CYP2A7	0	genome.wustl.edu	37	19	41387540	41387540	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	41387540	41387540	G	A	SNP	CYP2A7	ENST00000301146	human	ensembl	74_37	-1	known	silent	c.297	p.S99	0.136	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I_CYP2B-like	-	no_errors	CYP2A7	HGNC	ENSG00000198077	tier1	rs112051160	-	48	0	0.00	35	18	33.33
POTEC	0	genome.wustl.edu	37	18	14537923	14537923	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	18	14537923	14537923	G	A	SNP	POTEC	ENST00000358970	human	ensembl	74_37	-1	known	silent	c.687	p.G229	0.939	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEC	HGNC	ENSG00000183206	tier1	-	-	353	0	0.00	162	64	28.32
NGFR	0	genome.wustl.edu	37	17	47590304	47590304	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	47590304	47590304	G	A	SNP	NGFR	ENST00000172229	human	ensembl	74_37	+1	known	missense	c.1217	p.R406H	1.000	pfam_Death_domain,superfamily_DEATH-like_dom,smart_Death_domain,pfscan_Death_domain	pfam_TNFR/NGFR_Cys_rich_reg,pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,pfscan_Death_domain,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_16	-	no_errors	NGFR	HGNC	ENSG00000064300	tier1	-	-	52	0	0.00	41	21	33.33
IGFN1	0	genome.wustl.edu	37	1	201174376	201174376	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	201174376	201174376	C	T	SNP	IGFN1	ENST00000335211	human	ensembl	74_37	+1	known	silent	c.1083	p.D361	0.943	smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGFN1	HGNC	ENSG00000163395	tier1	-	-	49	0	0.00	29	12	29.27
LARP1	0	genome.wustl.edu	37	5	154193507	154193507	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	5	154193507	154193507	G	A	SNP	LARP1	ENST00000336314	human	ensembl	74_37	+1	known	missense	c.2911	p.G971S	0.985	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,smart_DM15,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP1	HGNC	ENSG00000155506	tier1	-	-	110	0	0.00	71	17	19.32
CA6	0	genome.wustl.edu	37	1	9005969	9005969	+	Silent	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	9005969	9005969	G	T	SNP	CA6	ENST00000377443	human	ensembl	74_37	+1	known	silent	c.24	p.L8	0.055	NULL	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA6	HGNC	ENSG00000131686	tier1	-	-	49	0	0.00	29	5	14.71
CACNA1I	0	genome.wustl.edu	37	22	40077043	40077043	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	22	40077043	40077043	C	T	SNP	CACNA1I	ENST00000336649	human	ensembl	74_37	+1	known	missense	c.5668	p.R1890C	0.840	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1I	HGNC	ENSG00000100346	tier1	rs183581233	GMAF=0.0005	67	0	0.00	51	17	25.00
EPHA10	0	genome.wustl.edu	37	1	38185238	38185238	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	38185238	38185238	G	-	DEL	EPHA10	ENST00000427468	human	ensembl	74_37	-1	known	frame_shift_del	c.2604	p.R869fs	0.983	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_SAM/pointed,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA10	HGNC	ENSG00000183317	tier1			56	0	0.00	35	16	31.37
RYR2	0	genome.wustl.edu	37	1	237758894	237758894	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	237758894	237758894	G	A	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	silent	c.4527	p.V1509	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	53	0	0.00	30	13	30.23
PRDM10	0	genome.wustl.edu	37	11	129794819	129794819	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	129794819	129794819	G	C	SNP	PRDM10	ENST00000358825	human	ensembl	74_37	-1	known	missense	c.1848	p.F616L	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PRDM10	HGNC	ENSG00000170325	tier1	-	-	49	0	0.00	38	5	11.63
NDUFAF1	0	genome.wustl.edu	37	15	41680706	41680706	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	41680706	41680706	T	A	SNP	NDUFAF1	ENST00000260361	human	ensembl	74_37	-1	known	missense	c.774	p.K258N	1.000	pfam_NADH-UbQ_OxRdtase-assoc_prot30,superfamily_Galactose-bd-like	pfam_NADH-UbQ_OxRdtase-assoc_prot30,superfamily_Galactose-bd-like	-	no_errors	NDUFAF1	HGNC	ENSG00000137806	tier1	-	-	81	0	0.00	69	6	8.00
COPG1	0	genome.wustl.edu	37	3	128990636	128990636	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	128990636	128990636	C	T	SNP	COPG1	ENST00000314797	human	ensembl	74_37	+1	known	missense	c.1870	p.R624C	0.023	pfam_Coatomer_gsu_app_Ig-like-sub,superfamily_Coatomer/clathrin_app_Ig-like,pirsf_Coatomer_gsu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Coatomer_gsu_app_Ig-like-sub,superfamily_ARM-type_fold,superfamily_Coatomer/clathrin_app_Ig-like,superfamily_Coatomer/calthrin_app_sub_C,pirsf_Coatomer_gsu	-	no_errors	COPG1	HGNC	ENSG00000181789	tier1	-	-	55	0	0.00	38	28	42.42
KRTAP16-1	0	genome.wustl.edu	37	17	39464603	39464603	+	Silent	SNP	A	A	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	39464603	39464603	A	T	SNP	KRTAP16-1	ENST00000391352	human	ensembl	74_37	-1	known	silent	c.903	p.P301	0.503	NULL	NULL	-	no_errors	KRTAP16-1	HGNC	ENSG00000212657	tier1	-	-	34	0	0.00	6	8	57.14
ENSG00000254967	0	genome.wustl.edu	37	11	125821790	125821790	+	RNA	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	125821790	125821790	C	T	SNP	ENSG00000254967	ENST00000524962	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.915	-	-	-	no_errors	RP11-680F20.6	Clone_based_vega_gene	ENSG00000254967	tier1	-	-	42	0	0.00	23	14	37.84
DDX51	0	genome.wustl.edu	37	12	132625047	132625047	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	132625047	132625047	C	T	SNP	DDX51	ENST00000397333	human	ensembl	74_37	-1	known	missense	c.1594	p.V532M	0.991	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX51	HGNC	ENSG00000185163	tier1	-	-	36	0	0.00	20	6	23.08
LRRC49	0	genome.wustl.edu	37	15	71341850	71341850	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	71341850	71341850	C	T	SNP	LRRC49	ENST00000260382	human	ensembl	74_37	+1	known	missense	c.1960	p.P654S	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC49	HGNC	ENSG00000137821	tier1	-	-	77	0	0.00	59	31	34.44
ZNF687	0	genome.wustl.edu	37	1	151259529	151259529	+	Silent	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	151259529	151259529	T	C	SNP	ZNF687	ENST00000324048	human	ensembl	74_37	+1	known	silent	c.762	p.P254	0.003	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF687	HGNC	ENSG00000143373	tier1	-	-	55	0	0.00	45	4	8.16
ALDOB	0	genome.wustl.edu	37	9	104187758	104187758	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	104187758	104187758	C	T	SNP	ALDOB	ENST00000374855	human	ensembl	74_37	-1	known	missense	c.776	p.R259H	1.000	pfam_Aldolase_I	pfam_Aldolase_I	-	no_errors	ALDOB	HGNC	ENSG00000136872	tier1	-	-	75	0	0.00	77	22	22.22
UGT2B15	0	genome.wustl.edu	37	4	69528859	69528859	+	Splice_Site	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	4	69528859	69528859	T	C	SNP	UGT2B15	ENST00000338206	human	ensembl	74_37	-1	known	splice_site	c.874-2	e3-2	0.998	-	-	-	no_errors	UGT2B15	HGNC	ENSG00000196620	tier1	-	-	46	0	0.00	61	10	14.08
S100PBP	0	genome.wustl.edu	37	1	33292387	33292387	+	Silent	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	33292387	33292387	T	C	SNP	S100PBP	ENST00000373475	human	ensembl	74_37	+1	known	silent	c.687	p.P229	0.131	NULL	NULL	-	no_errors	S100PBP	HGNC	ENSG00000116497	tier1	-	-	48	0	0.00	37	17	31.48
SNHG1	0	genome.wustl.edu	37	11	62622704	62622704	+	RNA	SNP	C	C	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	62622704	62622704	C	A	SNP	SNHG1	ENST00000539921	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG1	HGNC	ENSG00000255717	tier1	-	-	57	0	0.00	45	6	11.76
PCDHGB4	0	genome.wustl.edu	37	5	140769482	140769482	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	5	140769482	140769482	C	T	SNP	PCDHGB4	ENST00000519479	human	ensembl	74_37	+1	known	silent	c.2031	p.P677	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB4	HGNC	ENSG00000253953	tier1	-	-	21	0	0.00	14	8	36.36
WDR3	0	genome.wustl.edu	37	1	118499757	118499757	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	118499757	118499757	C	T	SNP	WDR3	ENST00000349139	human	ensembl	74_37	+1	known	silent	c.2520	p.N840	0.111	pfam_SSU_processome_Utp12	pfam_WD40_repeat,pfam_SSU_processome_Utp12,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR3	HGNC	ENSG00000065183	tier1	-	-	65	0	0.00	46	20	30.30
ENSG00000269939	0	genome.wustl.edu	37	11	82896643	82896644	+	RNA	INS	-	-	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	82896643	82896644	-	T	INS	ENSG00000269939	ENST00000602322	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	RP11-727A23.11	Clone_based_vega_gene	ENSG00000269939	tier1			35	0	0.00	33	3	8.33
DSP	0	genome.wustl.edu	37	6	7558370	7558370	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	7558370	7558370	A	G	SNP	DSP	ENST00000379802	human	ensembl	74_37	+1	known	missense	c.295	p.I99V	0.006	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696	tier1	-	-	88	0	0.00	40	27	40.30
KDM2A	0	genome.wustl.edu	37	11	67013474	67013474	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	67013474	67013474	G	T	SNP	KDM2A	ENST00000529006	human	ensembl	74_37	+1	known	missense	c.1852	p.V618F	1.000	superfamily_Znf_FYVE_PHD,pfscan_Znf_PHD-finger	pfam_Znf_CXXC,pfam_F-box_dom,pfam_JmjC_dom,superfamily_Znf_FYVE_PHD,smart_JmjC_dom,smart_Znf_PHD,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KDM2A	HGNC	ENSG00000173120	tier1	-	-	58	0	0.00	44	4	8.33
GBP6	0	genome.wustl.edu	37	1	89835160	89835160	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	89835160	89835160	C	T	SNP	GBP6	ENST00000370456	human	ensembl	74_37	+1	known	silent	c.246	p.C82	0.997	pfam_Guanylate-bd_N,superfamily_P-loop_NTPase	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP6	HGNC	ENSG00000183347	tier1	-	-	31	0	0.00	30	16	34.78
NLRC5	0	genome.wustl.edu	37	16	57059999	57059999	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	57059999	57059999	G	A	SNP	NLRC5	ENST00000262510	human	ensembl	74_37	+1	known	missense	c.1144	p.A382T	0.001	NULL	pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_NACHT_NTPase	-	no_errors	NLRC5	HGNC	ENSG00000140853	tier1	rs200058658	GMAF=0.0005	35	0	0.00	13	6	31.58
KALRN	0	genome.wustl.edu	37	3	124281829	124281829	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	124281829	124281829	C	T	SNP	KALRN	ENST00000360013	human	ensembl	74_37	+1	known	missense	c.5069	p.T1690I	1.000	superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145	tier1	-	-	59	0	0.00	28	8	22.22
SVOPL	0	genome.wustl.edu	37	7	138344683	138344683	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	138344683	138344683	C	T	SNP	SVOPL	ENST00000419765	human	ensembl	74_37	-1	novel	silent	c.396	p.S132	0.767	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SVOPL	HGNC	ENSG00000157703	tier1	-	-	88	0	0.00	65	30	31.25
MYH9	0	genome.wustl.edu	37	22	36737437	36737437	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	22	36737437	36737437	G	A	SNP	MYH9	ENST00000216181	human	ensembl	74_37	-1	known	silent	c.468	p.T156	0.890	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Regulat_G_prot_signal_superfam,superfamily_Prefoldin,superfamily_Myosin_S1_N,superfamily_STAT_TF_coiled-coil,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH9	HGNC	ENSG00000100345	tier1	-	-	45	0	0.00	29	15	34.09
PLTP	0	genome.wustl.edu	37	20	44539885	44539885	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	44539885	44539885	G	A	SNP	PLTP	ENST00000542937	human	ensembl	74_37	-1	known	nonsense	c.166	p.Q56*	1.000	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	PLTP	HGNC	ENSG00000100979	tier1	-	-	64	0	0.00	55	14	20.29
TET1	0	genome.wustl.edu	37	10	70405282	70405282	+	Silent	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	70405282	70405282	T	C	SNP	TET1	ENST00000373644	human	ensembl	74_37	+1	known	silent	c.2796	p.A932	0.001	NULL	pfam_Znf_CXXC,pfscan_Znf_CXXC	-	no_errors	TET1	HGNC	ENSG00000138336	tier1	-	-	64	0	0.00	27	23	46.00
PPFIA4	0	genome.wustl.edu	37	1	203014996	203014996	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	203014996	203014996	G	T	SNP	PPFIA4	ENST00000414050	human	ensembl	74_37	+1	known	nonsense	c.7	p.E3*	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA4	HGNC	ENSG00000143847	tier1	-	-	37	0	0.00	23	9	28.12
RPTN	0	genome.wustl.edu	37	1	152129217	152129217	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	152129217	152129217	G	T	SNP	RPTN	ENST00000316073	human	ensembl	74_37	-1	known	missense	c.358	p.Q120K	0.192	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	RPTN	HGNC	ENSG00000215853	tier1	-	-	95	0	0.00	76	20	20.83
MORC3	0	genome.wustl.edu	37	21	37741473	37741473	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	21	37741473	37741473	G	A	SNP	MORC3	ENST00000400485	human	ensembl	74_37	+1	known	missense	c.1807	p.V603I	0.000	NULL	pfam_Znf_CW,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,pfscan_Znf_CW	-	no_errors	MORC3	HGNC	ENSG00000159256	tier1	-	-	61	0	0.00	20	13	39.39
KCNC3	0	genome.wustl.edu	37	19	50826791	50826791	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	50826791	50826791	G	A	SNP	KCNC3	ENST00000477616	human	ensembl	74_37	-1	known	silent	c.1419	p.G473	1.000	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_K_chnl_volt-dep_Kv3_ID,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3.3,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNC3	HGNC	ENSG00000131398	tier1	-	-	49	0	0.00	25	5	16.67
ABCG8	0	genome.wustl.edu	37	2	44102440	44102440	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	44102440	44102440	C	T	SNP	ABCG8	ENST00000272286	human	ensembl	74_37	+1	known	silent	c.1644	p.A548	0.001	pfam_ABC_2_trans	pfam_ABC_2_trans,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,pfscan_ABC_transporter-like	-	no_errors	ABCG8	HGNC	ENSG00000143921	tier1	rs200018072	GMAF=0.0005	30	0	0.00	11	9	45.00
PCDH1	0	genome.wustl.edu	37	5	141242814	141242815	+	Frame_Shift_Ins	INS	-	-	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	5	141242814	141242815	-	G	INS	PCDH1	ENST00000287008	human	ensembl	74_37	-1	known	frame_shift_ins	c.3082_3081	p.K1027fs	1.000:1.000	pfam_Protocadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH1	HGNC	ENSG00000156453	tier1			58	0	0.00	45	12	21.05
KCNH6	0	genome.wustl.edu	37	17	61620974	61620974	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	61620974	61620974	C	A	SNP	KCNH6	ENST00000583023	human	ensembl	74_37	+1	known	missense	c.2186	p.P729H	0.651	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_ELK,prints_2pore_dom_K_chnl,pfscan_cNMP-bd_dom	-	no_errors	KCNH6	HGNC	ENSG00000173826	tier1	-	-	76	0	0.00	73	7	8.75
LOC63930	0	genome.wustl.edu	37	20	61711537	61711537	+	RNA	SNP	C	C	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	61711537	61711537	C	G	SNP	LOC63930	ENST00000607802	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	RP11-305P22.9	Clone_based_vega_gene	ENSG00000272259	tier1	-	-	60	0	0.00	73	12	14.12
SGSM2	0	genome.wustl.edu	37	17	2268616	2268616	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	2268616	2268616	C	T	SNP	SGSM2	ENST00000268989	human	ensembl	74_37	+1	known	silent	c.1269	p.P423	0.021	NULL	pfam_Run,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Run,smart_Rab-GTPase-TBC_dom,pfscan_Run,pfscan_Rab-GTPase-TBC_dom	-	no_errors	SGSM2	HGNC	ENSG00000141258	tier1	-	-	57	0	0.00	29	19	39.58
STON2	0	genome.wustl.edu	37	14	81743643	81743643	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	14	81743643	81743643	C	T	SNP	STON2	ENST00000267540	human	ensembl	74_37	-1	known	missense	c.2012	p.R671Q	0.998	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Stonin,pfscan_Clathrin_mu_C	pfam_Stonin2_N,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Stonin,pfscan_Clathrin_mu_C,pfscan_SHD	-	no_errors	STON2	HGNC	ENSG00000140022	tier1	-	-	39	0	0.00	8	10	55.56
BRD9	0	genome.wustl.edu	37	5	887533	887533	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	5	887533	887533	G	A	SNP	BRD9	ENST00000467963	human	ensembl	74_37	-1	known	silent	c.660	p.T220	0.120	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	pfam_DUF3512,pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD9	HGNC	ENSG00000028310	tier1	-	-	43	0	0.00	16	11	40.74
SIGLEC7	0	genome.wustl.edu	37	19	51645979	51645979	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	51645979	51645979	C	T	SNP	SIGLEC7	ENST00000317643	human	ensembl	74_37	+1	known	missense	c.353	p.A118V	0.000	pfam_Ig_V-set,smart_Ig_sub	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC7	HGNC	ENSG00000168995	tier1	-	-	81	0	0.00	46	18	28.12
PCM1	0	genome.wustl.edu	37	8	17849059	17849059	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	8	17849059	17849059	G	A	SNP	PCM1	ENST00000325083	human	ensembl	74_37	+1	known	missense	c.4540	p.V1514M	1.000	NULL	NULL	-	no_errors	PCM1	HGNC	ENSG00000078674	tier1	-	-	67	0	0.00	27	9	25.00
ARHGAP23	0	genome.wustl.edu	37	17	36623383	36623383	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	36623383	36623383	G	A	SNP	ARHGAP23	ENST00000431231	human	ensembl	74_37	+1	known	missense	c.1459	p.D487N	0.974	NULL	pfam_RhoGAP_dom,pfam_PDZ,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP23	HGNC	ENSG00000225485	tier1	-	-	60	0	0.00	34	23	40.35
OVCH2	0	genome.wustl.edu	37	11	7712590	7712590	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	7712590	7712590	G	T	SNP	OVCH2	ENST00000454689	human	ensembl	74_37	-1	known	missense	c.1549	p.P517T	0.035	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_Peptidase_S1,pfam_CUB_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,smart_Peptidase_S1,smart_CUB_dom,pfscan_CUB_dom,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	OVCH2	HGNC	ENSG00000183378	tier1	-	-	31	0	0.00	25	9	26.47
LRP1B	0	genome.wustl.edu	37	2	141474275	141474275	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	141474275	141474275	C	A	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.5869	p.G1957W	1.000	smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	80	0	0.00	52	22	29.73
UGGT2	0	genome.wustl.edu	37	13	96622469	96622469	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	13	96622469	96622469	C	T	SNP	UGGT2	ENST00000376747	human	ensembl	74_37	-1	known	missense	c.1232	p.R411H	0.148	NULL	pfam_UDP-g_GGtrans,pfam_Glyco_trans_8	-	no_errors	UGGT2	HGNC	ENSG00000102595	tier1	rs140859099	-	107	0	0.00	74	26	26.00
RXRG	0	genome.wustl.edu	37	1	165370516	165370516	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	165370516	165370516	G	A	SNP	RXRG	ENST00000359842	human	ensembl	74_37	-1	known	missense	c.1376	p.P459L	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Nuc_recep-AF1,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoid-X_rcpt/HNF4,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_COUP_TF	-	no_errors	RXRG	HGNC	ENSG00000143171	tier1	-	-	117	0	0.00	62	25	28.74
LRP8	0	genome.wustl.edu	37	1	53724100	53724100	+	Silent	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	53724100	53724100	A	G	SNP	LRP8	ENST00000306052	human	ensembl	74_37	-1	known	silent	c.2100	p.C700	1.000	superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP8	HGNC	ENSG00000157193	tier1	-	-	25	0	0.00	10	11	52.38
MAPK3	0	genome.wustl.edu	37	16	30128165	30128165	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	30128165	30128165	C	T	SNP	MAPK3	ENST00000403394	human	ensembl	74_37	-1	known	missense	c.1067	p.G356D	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_ERK1/2,prints_MAPK_ERK3/4	-	no_errors	MAPK3	HGNC	ENSG00000102882	tier1	-	-	50	0	0.00	42	11	20.75
DIXDC1	0	genome.wustl.edu	37	11	111808168	111808168	+	RNA	SNP	A	A	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	111808168	111808168	A	C	SNP	DIXDC1	ENST00000389821	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.085	-	-	-	no_errors	DIXDC1	HGNC	ENSG00000150764	tier1	-	-	25	0	0.00	14	5	26.32
PSMD5-AS1	0	genome.wustl.edu	37	9	123605712	123605727	+	Splice_Site	DEL	GAAGGCGTGAGTAATA	GAAGGCGTGAGTAATA	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	GAAGGCGTGAGTAATA	GAAGGCGTGAGTAATA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	123605712	123605727	GAAGGCGTGAGTAATA	-	DEL	PSMD5-AS1	ENST00000442982	human	ensembl	74_37	+1	known	splice_site_del	c.NULL	NULL	0.008:0.012:0.100:0.249:0.297:0.353:0.369:0.392:0.402:0.369:0.354:0.172:0.065:0.010:0.000:0.000	-	-	-	no_errors	PSMD5-AS1	HGNC	ENSG00000226752	tier1			NA	NA	NA	NA	NA	NA
PGLYRP2	0	genome.wustl.edu	37	19	15586656	15586656	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	15586656	15586656	G	A	SNP	PGLYRP2	ENST00000292609	human	ensembl	74_37	-1	known	silent	c.825	p.G275	0.380	NULL	pfam_Amidase_domain,superfamily_Amidase_domain,smart_PGRP_domain_met/bac,smart_Amidase_domain	-	no_errors	PGLYRP2	HGNC	ENSG00000161031	tier1	-	-	59	0	0.00	37	6	13.95
DHX37	0	genome.wustl.edu	37	12	125461958	125461958	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	125461958	125461958	C	T	SNP	DHX37	ENST00000308736	human	ensembl	74_37	-1	known	missense	c.817	p.V273M	0.976	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_T2SS_protein-E,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_T2SS_protein-E,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX37	HGNC	ENSG00000150990	tier1	-	-	42	0	0.00	27	9	25.00
PAPD4	0	genome.wustl.edu	37	5	78944893	78944893	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	5	78944893	78944893	C	T	SNP	PAPD4	ENST00000296783	human	ensembl	74_37	+1	known	nonsense	c.907	p.R303*	1.000	NULL	pfam_PAP_assoc	-	no_errors	PAPD4	HGNC	ENSG00000164329	tier1	-	-	82	0	0.00	62	28	30.43
SFMBT2	0	genome.wustl.edu	37	10	7213964	7213964	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	7213964	7213964	C	T	SNP	SFMBT2	ENST00000361972	human	ensembl	74_37	-1	known	missense	c.2308	p.V770M	0.002	NULL	pfam_Mbt,pfam_DUF3588,pfam_SAM_type1,pfam_Pointed_dom,superfamily_SAM/pointed,superfamily_ARM-type_fold,smart_Mbt,smart_SAM,pfscan_Mbt	-	no_errors	SFMBT2	HGNC	ENSG00000198879	tier1	-	-	49	0	0.00	21	9	30.00
PLXNA1	0	genome.wustl.edu	37	3	126748378	126748378	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	126748378	126748378	C	T	SNP	PLXNA1	ENST00000393409	human	ensembl	74_37	+1	known	silent	c.4869	p.Y1623	0.967	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA1	HGNC	ENSG00000114554	tier1	-	-	51	0	0.00	44	11	20.00
KCNQ2	0	genome.wustl.edu	37	20	62046292	62046292	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	62046292	62046292	G	A	SNP	KCNQ2	ENST00000354587	human	ensembl	74_37	-1	known	missense	c.1405	p.R469C	1.000	pfam_K_chnl_volt-dep_KCNQ_C	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ2,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ2	HGNC	ENSG00000075043	tier1	-	-	86	0	0.00	32	18	36.00
BTRC	0	genome.wustl.edu	37	10	103291028	103291028	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	103291028	103291028	G	A	SNP	BTRC	ENST00000370187	human	ensembl	74_37	+1	known	missense	c.778	p.G260R	1.000	superfamily_F-box_dom	pfam_WD40_repeat,pfam_Beta-TrCP_D,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	BTRC	HGNC	ENSG00000166167	tier1	-	-	92	0	0.00	91	27	22.88
CDHR5	0	genome.wustl.edu	37	11	619384	619384	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	619384	619384	C	T	SNP	CDHR5	ENST00000358353	human	ensembl	74_37	-1	known	missense	c.1300	p.A434T	0.533	superfamily_Cadherin-like,pfscan_Cadherin	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	-	no_errors	CDHR5	HGNC	ENSG00000099834	tier1	-	-	70	0	0.00	80	17	17.53
POTEF	0	genome.wustl.edu	37	2	130877846	130877846	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	130877846	130877846	G	A	SNP	POTEF	ENST00000357462	human	ensembl	74_37	-1	known	silent	c.243	p.G81	0.002	NULL	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEF	HGNC	ENSG00000196604	tier1	-	-	143	0	0.00	82	23	21.70
TMPRSS7	0	genome.wustl.edu	37	3	111769565	111769565	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	111769565	111769565	A	G	SNP	TMPRSS7	ENST00000419127	human	ensembl	74_37	+1	known	missense	c.760	p.K254E	1.000	pfam_CUB_dom,superfamily_CUB_dom,pfscan_CUB_dom	pfam_Peptidase_S1,pfam_SEA_dom,pfam_LDrepeatLR_classA_rpt,pfam_CUB_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1,prints_Peptidase_S1A,prints_LDrepeatLR_classA_rpt	-	no_errors	TMPRSS7	HGNC	ENSG00000176040	tier1	-	-	102	0	0.00	67	28	29.47
LOC63930	0	genome.wustl.edu	37	20	61711627	61711627	+	RNA	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	61711627	61711627	C	T	SNP	LOC63930	ENST00000607802	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP11-305P22.9	Clone_based_vega_gene	ENSG00000272259	tier1	-	-	33	0	0.00	40	8	16.67
FAM124A	0	genome.wustl.edu	37	13	51825713	51825713	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	13	51825713	51825713	G	A	SNP	FAM124A	ENST00000280057	human	ensembl	74_37	+1	known	silent	c.318	p.A106	0.029	NULL	NULL	-	no_errors	FAM124A	HGNC	ENSG00000150510	tier1	-	-	21	0	0.00	22	4	15.38
MR1	0	genome.wustl.edu	37	1	181018220	181018220	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	181018220	181018220	G	A	SNP	MR1	ENST00000367580	human	ensembl	74_37	+1	known	missense	c.100	p.V34I	0.000	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	MR1	HGNC	ENSG00000153029	tier1	-	-	58	0	0.00	40	15	27.27
EPC1	0	genome.wustl.edu	37	10	32580192	32580192	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	32580192	32580192	G	A	SNP	EPC1	ENST00000263062	human	ensembl	74_37	-1	known	missense	c.874	p.P292S	1.000	NULL	pfam_Enhancer_polycomb_C,pfam_Enhancer_polycomb-like_N	-	no_errors	EPC1	HGNC	ENSG00000120616	tier1	-	-	132	0	0.00	54	38	41.30
ARHGEF2	0	genome.wustl.edu	37	1	155931509	155931509	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	155931509	155931509	G	A	SNP	ARHGEF2	ENST00000368315	human	ensembl	74_37	-1	known	missense	c.1414	p.R472C	0.992	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF2	HGNC	ENSG00000116584	tier1	-	-	34	0	0.00	20	8	28.57
GBF1	0	genome.wustl.edu	37	10	104126938	104126938	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	104126938	104126938	C	T	SNP	GBF1	ENST00000369983	human	ensembl	74_37	+1	known	missense	c.2527	p.R843C	1.000	pfam_Sec7_dom,superfamily_Sec7_dom,smart_Sec7_dom,pfscan_Sec7_dom	pfam_Sec7_dom,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	GBF1	HGNC	ENSG00000107862	tier1	-	-	47	0	0.00	27	7	20.00
PAPD5	0	genome.wustl.edu	37	16	50263693	50263693	+	RNA	DEL	T	T	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	50263693	50263693	T	-	DEL	PAPD5	ENST00000573002	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.737	-	-	-	no_errors	PAPD5	HGNC	ENSG00000121274	tier1			74	0	0.00	53	11	17.19
AMPD1	0	genome.wustl.edu	37	1	115226834	115226834	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	115226834	115226834	T	C	SNP	AMPD1	ENST00000520113	human	ensembl	74_37	-1	known	missense	c.632	p.E211G	0.997	pirsf_AMP_deaminase,tigrfam_AMP_deaminase	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	-	no_errors	AMPD1	HGNC	ENSG00000116748	tier1	-	-	121	0	0.00	82	24	22.64
ARPC1B	0	genome.wustl.edu	37	7	98988806	98988806	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	98988806	98988806	C	T	SNP	ARPC1B	ENST00000252725	human	ensembl	74_37	+1	known	missense	c.713	p.A238V	0.794	superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_ARPC2/3_su1	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_ARPC2/3_su1,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ARPC1B	HGNC	ENSG00000130429	tier1	-	-	26	0	0.00	27	4	12.90
KIAA1429	0	genome.wustl.edu	37	8	95504027	95504027	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	8	95504027	95504027	C	T	SNP	KIAA1429	ENST00000297591	human	ensembl	74_37	-1	known	missense	c.4919	p.R1640H	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	KIAA1429	HGNC	ENSG00000164944	tier1	-	-	115	0	0.00	96	41	29.93
ACAN	0	genome.wustl.edu	37	15	89391218	89391218	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	89391218	89391218	C	T	SNP	ACAN	ENST00000439576	human	ensembl	74_37	+1	known	missense	c.1681	p.R561C	1.000	pfam_Link,superfamily_C-type_lectin_fold,smart_Link,pfscan_Link	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,smart_EG-like_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	ACAN	HGNC	ENSG00000157766	tier1	-	-	43	0	0.00	27	12	30.77
MSH6	0	genome.wustl.edu	37	2	48030639	48030640	+	Frame_Shift_Ins	INS	-	-	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	48030639	48030640	-	C	INS	MSH6	ENST00000234420	human	ensembl	74_37	+1	known	frame_shift_ins	c.3253_3254	p.F1088fs	0.001:0.003	pfam_DNA_mismatch_repair_MutS_C,superfamily_P-loop_NTPase,smart_DNA_mismatch_repair_MutS_core,pirsf_DNA_mismatch_repair_Msh6	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_core,pfam_PWWP_dom,pfam_DNA_mismatch_repair_MutS_clamp,pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_PWWP_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C,pirsf_DNA_mismatch_repair_Msh6,pfscan_PWWP_dom	-	no_errors	MSH6	HGNC	ENSG00000116062	tier1			108	0	0.00	74	18	19.57
FMOD	0	genome.wustl.edu	37	1	203316599	203316599	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	203316599	203316599	G	A	SNP	FMOD	ENST00000354955	human	ensembl	74_37	-1	known	missense	c.800	p.A267V	0.002	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	FMOD	HGNC	ENSG00000122176	tier1	-	-	57	0	0.00	50	23	31.51
TPGS1	0	genome.wustl.edu	37	19	507660	507660	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	507660	507660	C	T	SNP	TPGS1	ENST00000359315	human	ensembl	74_37	+1	known	silent	c.154	p.L52	1.000	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	-	no_errors	TPGS1	HGNC	ENSG00000141933	tier1	-	-	34	0	0.00	23	7	23.33
CUL9	0	genome.wustl.edu	37	6	43155850	43155850	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	43155850	43155850	G	A	SNP	CUL9	ENST00000252050	human	ensembl	74_37	+1	known	missense	c.1981	p.A661T	0.759	NULL	pfam_Cullin_N,pfam_CPH_domain,pfam_Znf_C6HC,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,superfamily_UBA-like,smart_Cullin_neddylation_domain,smart_Znf_C6HC,pfscan_Znf_RING,pfscan_Cullin_homology	-	no_errors	CUL9	HGNC	ENSG00000112659	tier1	-	-	41	0	0.00	33	4	10.81
ENSG00000226145	0	genome.wustl.edu	37	17	16725746	16725746	+	RNA	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	16725746	16725746	C	T	SNP	ENSG00000226145	ENST00000417510	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	AC022596.6	Clone_based_vega_gene	ENSG00000226145	tier1	-	-	137	0	0.00	55	29	34.52
FCGBP	0	genome.wustl.edu	37	19	40411970	40411970	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	40411970	40411970	C	T	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	missense	c.3658	p.G1220S	0.991	smart_VWC_out,smart_VWF_C	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920	tier1	-	-	72	0	0.00	34	14	29.17
KIAA1211	0	genome.wustl.edu	37	4	57164406	57164406	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	4	57164406	57164406	G	A	SNP	KIAA1211	ENST00000504228	human	ensembl	74_37	+1	known	missense	c.11	p.R4Q	1.000	NULL	NULL	-	no_errors	KIAA1211	HGNC	ENSG00000109265	tier1	-	-	124	0	0.00	102	43	29.66
MAP3K6	0	genome.wustl.edu	37	1	27690425	27690425	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	27690425	27690425	A	G	SNP	MAP3K6	ENST00000357582	human	ensembl	74_37	-1	known	missense	c.847	p.S283P	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K6	HGNC	ENSG00000142733	tier1	-	-	59	0	0.00	36	21	36.84
CD244	0	genome.wustl.edu	37	1	160811420	160811420	+	Silent	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	160811420	160811420	A	G	SNP	CD244	ENST00000368033	human	ensembl	74_37	-1	known	silent	c.333	p.S111	0.000	pfam_NK_rcpt_2B4_Ig_dom	pfam_NK_rcpt_2B4_Ig_dom,pfscan_Ig-like_dom	-	no_errors	CD244	HGNC	ENSG00000122223	tier1	-	-	62	0	0.00	27	16	37.21
INA	0	genome.wustl.edu	37	10	105048132	105048132	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	105048132	105048132	C	T	SNP	INA	ENST00000369849	human	ensembl	74_37	+1	known	silent	c.1206	p.G402	0.211	pfam_IF	pfam_IF,pfam_Intermed_filament_DNA-bd,superfamily_Prefoldin	-	no_errors	INA	HGNC	ENSG00000148798	tier1	-	-	115	0	0.00	93	29	23.77
UBXN6	0	genome.wustl.edu	37	19	4446615	4446615	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	4446615	4446615	C	T	SNP	UBXN6	ENST00000301281	human	ensembl	74_37	-1	known	missense	c.802	p.A268T	0.952	NULL	pfam_PUB_domain,pfam_UBX,smart_PUG-dom,smart_UBX,pfscan_UBX	-	no_errors	UBXN6	HGNC	ENSG00000167671	tier1	rs151060057	-	20	0	0.00	11	7	38.89
RYR2	0	genome.wustl.edu	37	1	237919660	237919660	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	237919660	237919660	G	T	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.11236	p.V3746L	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	46	0	0.00	35	9	20.45
KANK1	0	genome.wustl.edu	37	9	732477	732477	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	732477	732477	G	A	SNP	KANK1	ENST00000382297	human	ensembl	74_37	+1	known	silent	c.3105	p.E1035	1.000	NULL	pfam_Ankyrin_rpt,pfam_KN_motif,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK1	HGNC	ENSG00000107104	tier1	-	-	59	0	0.00	30	12	28.57
RICTOR	0	genome.wustl.edu	37	5	38996934	38996934	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	5	38996934	38996934	C	T	SNP	RICTOR	ENST00000296782	human	ensembl	74_37	-1	known	missense	c.443	p.R148Q	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	RICTOR	HGNC	ENSG00000164327	tier1	-	-	80	0	0.00	51	23	31.08
ARMC3	0	genome.wustl.edu	37	10	23287301	23287301	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	23287301	23287301	C	T	SNP	ARMC3	ENST00000298032	human	ensembl	74_37	+1	known	missense	c.1400	p.A467V	0.675	superfamily_ARM-type_fold	pfam_Armadillo,pfam_HEAT,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC3	HGNC	ENSG00000165309	tier1	-	-	12	0	0.00	5	5	50.00
SLC25A44	0	genome.wustl.edu	37	1	156180795	156180795	+	RNA	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	156180795	156180795	G	A	SNP	SLC25A44	ENST00000469537	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC25A44	HGNC	ENSG00000160785	tier1	-	-	20	0	0.00	12	4	25.00
KMT2D	0	genome.wustl.edu	37	12	49416528	49416528	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	49416528	49416528	A	G	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.16183	p.W5395R	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	57	0	0.00	47	19	28.79
UBL3	0	genome.wustl.edu	37	13	30341763	30341763	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	13	30341763	30341763	T	C	SNP	UBL3	ENST00000380680	human	ensembl	74_37	-1	known	missense	c.293	p.N98S	1.000	pirsf_M-anchored_Ub-fold_HCG-1	pirsf_M-anchored_Ub-fold_HCG-1,pfscan_Ubiquitin_supergroup	-	no_errors	UBL3	HGNC	ENSG00000122042	tier1	-	-	61	0	0.00	49	11	18.33
CYLC2	0	genome.wustl.edu	37	9	105767654	105767654	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	105767654	105767654	A	-	DEL	CYLC2	ENST00000374798	human	ensembl	74_37	+1	known	frame_shift_del	c.741	p.D250fs	0.000	NULL	NULL	-	no_errors	CYLC2	HGNC	ENSG00000155833	tier1			73	0	0.00	56	8	12.50
ATAD3B	0	genome.wustl.edu	37	1	1417600	1417600	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	1417600	1417600	C	T	SNP	ATAD3B	ENST00000308647	human	ensembl	74_37	+1	known	silent	c.597	p.A199	0.931	pfam_DUF3523	pfam_DUF3523,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	ATAD3B	HGNC	ENSG00000160072	tier1	-	-	84	0	0.00	27	31	53.45
FGD5	0	genome.wustl.edu	37	3	14949168	14949168	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	14949168	14949168	C	G	SNP	FGD5	ENST00000285046	human	ensembl	74_37	+1	known	missense	c.3286	p.H1096D	1.000	superfamily_DH-domain	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD5	HGNC	ENSG00000154783	tier1	-	-	98	0	0.00	372	57	13.26
KIAA1958	0	genome.wustl.edu	37	9	115380914	115380914	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	115380914	115380914	C	T	SNP	KIAA1958	ENST00000374244	human	ensembl	74_37	+1	known	silent	c.1935	p.V645	0.000	pfam_DUF3504	pfam_DUF3504	-	no_errors	KIAA1958	HGNC	ENSG00000165185	tier1	-	-	40	0	0.00	28	13	31.71
LOC100128374	0	genome.wustl.edu	37	7	1885976	1885976	+	RNA	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	1885976	1885976	G	A	SNP	LOC100128374	ENST00000480694	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC110781.3	Clone_based_vega_gene	ENSG00000176349	tier1	-	-	67	0	0.00	32	15	31.91
TRIOBP	0	genome.wustl.edu	37	22	38167666	38167666	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	22	38167666	38167666	C	T	SNP	TRIOBP	ENST00000406386	human	ensembl	74_37	+1	known	missense	c.6859	p.R2287C	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	TRIOBP	HGNC	ENSG00000100106	tier1	-	-	50	0	0.00	32	8	20.00
UMPS	0	genome.wustl.edu	37	3	124458975	124458975	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	124458975	124458975	C	T	SNP	UMPS	ENST00000232607	human	ensembl	74_37	+1	known	missense	c.1087	p.R363W	0.998	pfam_OMPdeCOase_dom,superfamily_RibuloseP-bd_barrel,smart_OMPdeCOase_dom,tigrfam_OMPdecase	pfam_OMPdeCOase_dom,pfam_PRibTrfase_dom,superfamily_RibuloseP-bd_barrel,smart_OMPdeCOase_dom,tigrfam_OMPdecase,tigrfam_Or_phspho_trans_dom	-	no_errors	UMPS	HGNC	ENSG00000114491	tier1	-	-	35	0	0.00	35	16	31.37
COG8	0	genome.wustl.edu	37	16	69354328	69354328	+	RNA	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	69354328	69354328	G	A	SNP	COG8	ENST00000564419	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	COG8	HGNC	ENSG00000213380	tier1	-	-	20	0	0.00	12	4	23.53
CCDC107	0	genome.wustl.edu	37	9	35660635	35660635	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	35660635	35660635	T	-	DEL	CCDC107	ENST00000426546	human	ensembl	74_37	+1	known	frame_shift_del	c.401	p.F135fs	0.998	NULL	NULL	-	no_errors	CCDC107	HGNC	ENSG00000159884	tier1			55	0	0.00	64	10	13.51
OTUD7A	0	genome.wustl.edu	37	15	31819495	31819495	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	31819495	31819495	G	A	SNP	OTUD7A	ENST00000382902	human	ensembl	74_37	-1	known	silent	c.669	p.H223	0.522	pfam_OTU,pfscan_OTU	pfam_OTU,superfamily_UBA-like,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	OTUD7A	HGNC	ENSG00000169918	tier1	-	-	45	0	0.00	29	12	29.27
VPS18	0	genome.wustl.edu	37	15	41191385	41191385	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	41191385	41191385	C	T	SNP	VPS18	ENST00000220509	human	ensembl	74_37	+1	known	silent	c.369	p.Y123	0.899	NULL	pfam_Pep3_Vps18,pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold	-	no_errors	VPS18	HGNC	ENSG00000104142	tier1	-	-	38	0	0.00	37	7	15.91
TTN	0	genome.wustl.edu	37	2	179469795	179469795	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	179469795	179469795	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.46405	p.R15469W	0.829	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	rs201623791	-	35	0	0.00	27	8	22.86
AHR	0	genome.wustl.edu	37	7	17369626	17369626	+	Silent	SNP	A	A	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	17369626	17369626	A	C	SNP	AHR	ENST00000242057	human	ensembl	74_37	+1	known	silent	c.501	p.R167	0.838	pfam_PAS_fold,superfamily_PAS,smart_PAS,pfscan_PAS	pfam_PAS_fold_3,pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	AHR	HGNC	ENSG00000106546	tier1	-	-	54	0	0.00	52	15	22.39
SLC38A1	0	genome.wustl.edu	37	12	46601385	46601385	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	46601385	46601385	C	G	SNP	SLC38A1	ENST00000398637	human	ensembl	74_37	-1	known	missense	c.408	p.K136N	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC38A1	HGNC	ENSG00000111371	tier1	-	-	85	0	0.00	57	31	35.23
USP47	0	genome.wustl.edu	37	11	11969622	11969622	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	11969622	11969622	C	T	SNP	USP47	ENST00000399455	human	ensembl	74_37	+1	known	silent	c.3282	p.S1094	1.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP47	HGNC	ENSG00000170242	tier1	-	-	67	0	0.00	44	20	30.77
MGAT4C	0	genome.wustl.edu	37	12	86374058	86374058	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	86374058	86374058	C	T	SNP	MGAT4C	ENST00000393205	human	ensembl	74_37	-1	known	missense	c.533	p.R178H	1.000	pfam_Glyco_transf_54	pfam_Glyco_transf_54,superfamily_LSM_dom	-	no_errors	MGAT4C	HGNC	ENSG00000182050	tier1	-	-	41	0	0.00	21	12	36.36
MAP3K13	0	genome.wustl.edu	37	3	185181425	185181425	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	185181425	185181425	C	G	SNP	MAP3K13	ENST00000265026	human	ensembl	74_37	+1	known	missense	c.1366	p.R456G	0.999	pirsf_MAP3K12_MAP3K13,superfamily_Kinase-like_dom	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K13	HGNC	ENSG00000073803	tier1	-	-	72	0	0.00	69	19	21.59
TSEN54	0	genome.wustl.edu	37	17	73518349	73518349	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	73518349	73518349	G	A	SNP	TSEN54	ENST00000333213	human	ensembl	74_37	+1	known	missense	c.1187	p.R396Q	0.000	NULL	NULL	-	no_errors	TSEN54	HGNC	ENSG00000182173	tier1	-	-	19	0	0.00	8	5	38.46
SRP54	0	genome.wustl.edu	37	14	35480757	35480757	+	Silent	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	14	35480757	35480757	A	G	SNP	SRP54	ENST00000216774	human	ensembl	74_37	+1	known	silent	c.528	p.V176	1.000	pfam_SRP54_GTPase_dom,pfam_CobW/HypB/UreG_dom,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_SRP54_GTPase_dom,tigrfam_SRP54_euk	pfam_SRP54_GTPase_dom,pfam_Signal_recog_particle_SRP54_M,pfam_Signal_recog_particl_SRP54_hlx,pfam_CobW/HypB/UreG_dom,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP54_M,superfamily_Signal_recog_particl_SRP54_hlx,smart_Signal_recog_particl_SRP54_hlx,smart_AAA+_ATPase,smart_SRP54_GTPase_dom,tigrfam_SRP54_euk	-	no_errors	SRP54	HGNC	ENSG00000100883	tier1	-	-	55	0	0.00	24	12	33.33
ADH4	0	genome.wustl.edu	37	4	100060216	100060216	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	4	100060216	100060216	T	-	DEL	ADH4	ENST00000423445	human	ensembl	74_37	-1	known	frame_shift_del	c.403	p.I135fs	0.147	pfam_ADH_GroES-like,superfamily_GroES-like,smart_PKS_ER	pfam_ADH_C,pfam_ADH_GroES-like,superfamily_GroES-like,smart_PKS_ER	-	no_errors	ADH4	HGNC	ENSG00000198099	tier1			66	0	0.00	29	14	32.56
ALMS1P	0	genome.wustl.edu	37	2	73912108	73912108	+	RNA	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	73912108	73912108	T	C	SNP	ALMS1P	ENST00000450720	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	ALMS1P	HGNC	ENSG00000163016	tier1	-	-	168	1	0.59	133	24	15.29
CCT3	0	genome.wustl.edu	37	1	156280431	156280431	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	156280431	156280431	G	A	SNP	CCT3	ENST00000295688	human	ensembl	74_37	-1	known	missense	c.1451	p.T484M	0.975	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,tigrfam_Chap_CCT_gamma	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_gamma	-	no_errors	CCT3	HGNC	ENSG00000163468	tier1	-	-	83	0	0.00	58	23	28.40
AP5S1	0	genome.wustl.edu	37	20	3804825	3804825	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	3804825	3804825	C	T	SNP	AP5S1	ENST00000246041	human	ensembl	74_37	+1	known	missense	c.484	p.R162W	0.988	NULL	NULL	-	no_errors	AP5S1	HGNC	ENSG00000125843	tier1	-	-	49	0	0.00	32	12	27.27
CACNA1B	0	genome.wustl.edu	37	9	140865850	140865850	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	140865850	140865850	G	A	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	missense	c.1352	p.R451H	0.999	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408	tier1	-	-	115	0	0.00	49	27	35.53
HIST1H2BO	0	genome.wustl.edu	37	6	27861357	27861357	+	Silent	SNP	T	T	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	27861357	27861357	T	A	SNP	HIST1H2BO	ENST00000303806	human	ensembl	74_37	+1	known	silent	c.117	p.S39	0.001	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BO	HGNC	ENSG00000196331	tier1	-	-	100	0	0.00	49	29	37.18
HMCN1	0	genome.wustl.edu	37	1	186147733	186147733	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	186147733	186147733	C	A	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.16129	p.P5377T	1.000	superfamily_Growth_fac_rcpt_N_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	41	0	0.00	32	10	23.81
RPN2	0	genome.wustl.edu	37	20	35858442	35858442	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	35858442	35858442	A	G	SNP	RPN2	ENST00000237530	human	ensembl	74_37	+1	known	missense	c.1561	p.T521A	1.000	pfam_Swp1	pfam_Swp1	-	no_errors	RPN2	HGNC	ENSG00000118705	tier1	-	-	63	0	0.00	64	17	20.99
LACTBL1	0	genome.wustl.edu	37	1	23286554	23286554	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	23286554	23286554	G	A	SNP	LACTBL1	ENST00000426928	human	ensembl	74_37	-1	putative	silent	c.198	p.G66	1.000	pfam_Beta-lactam-related,superfamily_Beta-lactam/transpept-like	pfam_Beta-lactam-related,superfamily_Beta-lactam/transpept-like	-	no_errors	LACTBL1	HGNC	ENSG00000215906	tier1	-	-	48	0	0.00	32	4	11.11
KIFAP3	0	genome.wustl.edu	37	1	170024465	170024465	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	170024465	170024465	G	A	SNP	KIFAP3	ENST00000361580	human	ensembl	74_37	-1	known	nonsense	c.145	p.R49*	1.000	NULL	superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	KIFAP3	HGNC	ENSG00000075945	tier1	-	-	93	0	0.00	80	11	12.09
FRYL	0	genome.wustl.edu	37	4	48569313	48569313	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	4	48569313	48569313	G	A	SNP	FRYL	ENST00000358350	human	ensembl	74_37	-1	known	nonsense	c.3121	p.R1041*	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FRYL	HGNC	ENSG00000075539	tier1	-	-	83	0	0.00	84	28	25.00
CCDC42	0	genome.wustl.edu	37	17	8638826	8638826	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	8638826	8638826	G	A	SNP	CCDC42	ENST00000293845	human	ensembl	74_37	-1	known	missense	c.596	p.A199V	1.000	NULL	NULL	-	no_errors	CCDC42	HGNC	ENSG00000161973	tier1	-	-	23	0	0.00	6	7	53.85
DSCC1	0	genome.wustl.edu	37	8	120862621	120862621	+	Splice_Site	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	8	120862621	120862621	C	T	SNP	DSCC1	ENST00000313655	human	ensembl	74_37	-1	known	splice_site	c.486+1	e3+1	1.000	-	-	-	no_errors	DSCC1	HGNC	ENSG00000136982	tier1	-	-	103	0	0.00	108	39	26.35
ZNF225	0	genome.wustl.edu	37	19	44636829	44636829	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	44636829	44636829	C	T	SNP	ZNF225	ENST00000262894	human	ensembl	74_37	+1	known	missense	c.2062	p.R688C	0.123	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF225	HGNC	ENSG00000256294	tier1	-	-	69	0	0.00	54	17	23.94
TFAP4	0	genome.wustl.edu	37	16	4308077	4308077	+	Silent	SNP	C	C	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	4308077	4308077	C	A	SNP	TFAP4	ENST00000204517	human	ensembl	74_37	-1	known	silent	c.996	p.S332	0.004	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TFAP4	HGNC	ENSG00000090447	tier1	-	-	62	0	0.00	36	12	25.00
PALM2-AKAP2	0	genome.wustl.edu	37	9	112900711	112900711	+	Silent	SNP	A	A	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	112900711	112900711	A	C	SNP	PALM2-AKAP2	ENST00000374530	human	ensembl	74_37	+1	known	silent	c.2887	p.R963	0.995	NULL	pfam_Paralemmin,pfam_RII_binding_1	-	no_errors	PALM2-AKAP2	HGNC	ENSG00000157654	tier1	-	-	66	0	0.00	42	15	26.32
TRPM5	0	genome.wustl.edu	37	11	2427900	2427900	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	2427900	2427900	G	T	SNP	TRPM5	ENST00000452833	human	ensembl	74_37	-1	known	missense	c.3248	p.T1083N	0.858	NULL	superfamily_Ankyrin_rpt-contain_dom	-	no_errors	TRPM5	HGNC	ENSG00000070985	tier1	-	-	41	0	0.00	34	4	10.53
TCEA2	0	genome.wustl.edu	37	20	62694711	62694711	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	62694711	62694711	G	A	SNP	TCEA2	ENST00000343484	human	ensembl	74_37	+1	known	missense	c.46	p.D16N	1.000	superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,pirsf_TF_IIS-rel,tigrfam_TFSII	pfam_TFIIS_cen_dom,pfam_TFIIS_N,pfam_Znf_TFIIS,superfamily_TFIIS_cen_dom,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,smart_TFS2M,smart_Znf_TFIIS,pirsf_TF_IIS-rel,pfscan_Znf_TFIIS,tigrfam_TFSII	-	no_errors	TCEA2	HGNC	ENSG00000171703	tier1	-	-	31	0	0.00	3	6	66.67
MDM1	0	genome.wustl.edu	37	12	68720410	68720410	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	68720410	68720410	G	T	SNP	MDM1	ENST00000430606	human	ensembl	74_37	-1	known	missense	c.525	p.F175L	0.000	NULL	NULL	-	no_errors	MDM1	HGNC	ENSG00000111554	tier1	-	-	42	0	0.00	46	4	8.00
RBM17	0	genome.wustl.edu	37	10	6157416	6157416	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	6157416	6157416	C	T	SNP	RBM17	ENST00000379888	human	ensembl	74_37	+1	known	missense	c.1103	p.A368V	1.000	smart_RRM_dom_euk,pirsf_Splicing_factor_SPF45	pfam_G_patch_dom,smart_G_patch_dom,smart_RRM_dom_euk,pirsf_Splicing_factor_SPF45,pfscan_G_patch_dom	-	no_errors	RBM17	HGNC	ENSG00000134453	tier1	-	-	82	0	0.00	52	25	32.47
MYO7A	0	genome.wustl.edu	37	11	76901827	76901827	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	76901827	76901827	C	T	SNP	MYO7A	ENST00000409709	human	ensembl	74_37	+1	known	missense	c.3836	p.T1279M	1.000	pfam_FERM_N,smart_Band_41_domain,pfscan_FERM_domain	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_FERM_central,pfam_FERM_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_Band_41_domain,smart_SH3_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_SH3_domain,prints_Myosin_head_motor_dom	-	no_errors	MYO7A	HGNC	ENSG00000137474	tier1	-	-	32	0	0.00	29	11	27.50
UNC5B	0	genome.wustl.edu	37	10	73046509	73046509	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	73046509	73046509	A	G	SNP	UNC5B	ENST00000335350	human	ensembl	74_37	+1	known	missense	c.616	p.I206V	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_ZU5,pfam_Ig_I-set,pfam_Death_domain,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5B	HGNC	ENSG00000107731	tier1	-	-	54	0	0.00	39	13	25.00
C9orf9	0	genome.wustl.edu	37	9	135763753	135763753	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	135763753	135763753	C	A	SNP	C9orf9	ENST00000356311	human	ensembl	74_37	+1	known	missense	c.424	p.P142T	1.000	NULL	NULL	-	no_errors	C9orf9	HGNC	ENSG00000165698	tier1	-	-	90	0	0.00	43	14	24.56
SYNCRIP	0	genome.wustl.edu	37	6	86329023	86329023	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	86329023	86329023	G	A	SNP	SYNCRIP	ENST00000369622	human	ensembl	74_37	-1	known	missense	c.1121	p.A374V	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	-	no_errors	SYNCRIP	HGNC	ENSG00000135316	tier1	-	-	58	0	0.00	35	13	26.53
RPL23AP79	0	genome.wustl.edu	37	19	59092830	59092837	+	RNA	DEL	TGGCGCTT	TGGCGCTT	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	TGGCGCTT	TGGCGCTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	59092830	59092837	TGGCGCTT	-	DEL	RPL23AP79	ENST00000479047	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.088:0.096:0.082:0.000:0.000:0.000:0.012:0.014	-	-	-	no_errors	RPL23AP79	HGNC	ENSG00000213753	tier1			NA	NA	NA	NA	NA	NA
INSL4	0	genome.wustl.edu	37	9	5233699	5233699	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	5233699	5233699	C	T	SNP	INSL4	ENST00000239316	human	ensembl	74_37	+1	known	missense	c.242	p.T81M	0.000	superfamily_Insulin-like,prints_Relaxin	superfamily_Insulin-like,prints_Placentin,prints_Relaxin	-	no_errors	INSL4	HGNC	ENSG00000120211	tier1	rs150771132	-	87	0	0.00	42	41	49.40
PTPRB	0	genome.wustl.edu	37	12	70956827	70956827	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	70956827	70956827	C	T	SNP	PTPRB	ENST00000334414	human	ensembl	74_37	-1	known	missense	c.3965	p.R1322H	0.981	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Ricin_B_lectin,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRB	HGNC	ENSG00000127329	tier1	-	-	46	0	0.00	36	14	28.00
NPIPB4	0	genome.wustl.edu	37	16	21854779	21854779	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	21854779	21854779	C	T	SNP	NPIPB4	ENST00000415645	human	ensembl	74_37	-1	known	missense	c.473	p.R158H	0.000	NULL	NULL	-	no_errors	NPIPB4	HGNC	ENSG00000185864	tier1	-	-	684	0	0.00	592	69	10.44
ZMYND11	0	genome.wustl.edu	37	10	226045	226045	+	Silent	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	226045	226045	T	C	SNP	ZMYND11	ENST00000381591	human	ensembl	74_37	+1	known	silent	c.93	p.I31	1.000	NULL	pfam_PWWP_dom,pfam_Bromodomain,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_MYND,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	ZMYND11	HGNC	ENSG00000015171	tier1	-	-	106	0	0.00	51	19	27.14
SH2D3A	0	genome.wustl.edu	37	19	6760806	6760806	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	6760806	6760806	T	A	SNP	SH2D3A	ENST00000245908	human	ensembl	74_37	-1	known	missense	c.262	p.I88L	0.790	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_SH2,pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_SH2,smart_RasGRF_CDC25,pfscan_SH2,prints_SH2	-	no_errors	SH2D3A	HGNC	ENSG00000125731	tier1	-	-	58	0	0.00	44	16	26.67
MYO15B	0	genome.wustl.edu	37	17	73620669	73620669	+	RNA	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	73620669	73620669	C	T	SNP	MYO15B	ENST00000577948	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MYO15B	HGNC	ENSG00000266714	tier1	-	-	16	0	0.00	16	5	23.81
ZNF268	0	genome.wustl.edu	37	12	133779442	133779442	+	Silent	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	133779442	133779442	T	C	SNP	ZNF268	ENST00000228289	human	ensembl	74_37	+1	known	silent	c.1170	p.C390	0.057	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF268	HGNC	ENSG00000090612	tier1	-	-	57	0	0.00	43	13	23.21
POM121	0	genome.wustl.edu	37	7	72418883	72418883	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	72418883	72418883	C	T	SNP	POM121	ENST00000395270	human	ensembl	74_37	+1	known	silent	c.2874	p.H958	0.001	NULL	NULL	-	no_errors	POM121	HGNC	ENSG00000196313	tier1	-	-	48	0	0.00	52	15	22.39
PTMAP5	0	genome.wustl.edu	37	13	82264110	82264110	+	RNA	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	13	82264110	82264110	C	T	SNP	PTMAP5	ENST00000607242	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.945	-	-	-	no_errors	PTMAP5	HGNC	ENSG00000214182	tier1	-	-	21	0	0.00	17	15	46.88
HECTD4	0	genome.wustl.edu	37	12	112601463	112601463	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	112601463	112601463	C	T	SNP	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	silent	c.12264	p.T4088	0.014	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064	tier1	-	-	19	0	0.00	18	4	18.18
C1orf43	0	genome.wustl.edu	37	1	154179927	154179927	+	RNA	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	154179927	154179927	C	T	SNP	C1orf43	ENST00000483282	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	C1orf43	HGNC	ENSG00000143612	tier1	-	-	62	0	0.00	56	14	20.00
IGSF11	0	genome.wustl.edu	37	3	118621566	118621566	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	118621566	118621566	G	A	SNP	IGSF11	ENST00000393775	human	ensembl	74_37	-1	known	missense	c.1097	p.P366L	0.995	NULL	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	IGSF11	HGNC	ENSG00000144847	tier1	-	-	37	0	0.00	34	11	24.44
TPSG1	0	genome.wustl.edu	37	16	1271958	1271958	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	1271958	1271958	G	A	SNP	TPSG1	ENST00000234798	human	ensembl	74_37	-1	known	missense	c.796	p.R266C	0.030	superfamily_Trypsin-like_Pept_dom,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TPSG1	HGNC	ENSG00000116176	tier1	rs146886017	-	27	0	0.00	11	6	35.29
ZNF672	0	genome.wustl.edu	37	1	249142625	249142625	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	249142625	249142625	G	A	SNP	ZNF672	ENST00000306562	human	ensembl	74_37	+1	known	silent	c.1152	p.L384	0.050	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF672	HGNC	ENSG00000171161	tier1	-	-	63	0	0.00	34	20	37.04
OR7G3	0	genome.wustl.edu	37	19	9237062	9237062	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	9237062	9237062	A	G	SNP	OR7G3	ENST00000305444	human	ensembl	74_37	-1	known	missense	c.565	p.C189R	0.978	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7G3	HGNC	ENSG00000170920	tier1	-	-	48	0	0.00	29	12	29.27
EHMT2	0	genome.wustl.edu	37	6	31856193	31856193	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	6	31856193	31856193	C	T	SNP	EHMT2	ENST00000395728	human	ensembl	74_37	-1	known	missense	c.1627	p.A543T	0.895	NULL	pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt	-	no_errors	EHMT2	HGNC	ENSG00000204371	tier1	-	-	41	0	0.00	19	16	45.71
TKTL2	0	genome.wustl.edu	37	4	164394067	164394067	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	4	164394067	164394067	T	C	SNP	TKTL2	ENST00000280605	human	ensembl	74_37	-1	known	missense	c.820	p.I274V	0.000	NULL	pfam_Transketolase_N,pfam_Transketolase-like_Pyr-bd,pfam_Transketolase_C,pfam_DH_E1,superfamily_Transketo_C/Pyr-ferredox_oxred,smart_Transketolase-like_Pyr-bd	-	no_errors	TKTL2	HGNC	ENSG00000151005	tier1	-	-	26	0	0.00	11	8	42.11
DPYD	0	genome.wustl.edu	37	1	98293695	98293695	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	98293695	98293695	G	A	SNP	DPYD	ENST00000370192	human	ensembl	74_37	-1	known	nonsense	c.208	p.R70*	1.000	superfamily_Helical_ferredxn	pfam_Dihydroorotate_DH_1_2,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_tRNA_hU_synthase,superfamily_Helical_ferredxn,prints_FAD_pyr_nucl-diS_OxRdtase,tigrfam_Dihydroorotate_DH	-	no_errors	DPYD	HGNC	ENSG00000188641	tier1	rs141597515	-	43	0	0.00	19	7	26.92
ZNF629	0	genome.wustl.edu	37	16	30795100	30795100	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	30795100	30795100	G	A	SNP	ZNF629	ENST00000262525	human	ensembl	74_37	-1	known	silent	c.549	p.C183	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF629	HGNC	ENSG00000102870	tier1	-	-	35	0	0.00	18	6	25.00
STAG3L1	0	genome.wustl.edu	37	7	74991273	74991273	+	RNA	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	74991273	74991273	C	T	SNP	STAG3L1	ENST00000402225	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.959	-	-	-	no_errors	STAG3L1	HGNC	ENSG00000205583	tier1	-	-	44	0	0.00	16	24	60.00
EHD2	0	genome.wustl.edu	37	19	48244692	48244693	+	RNA	INS	-	-	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	48244692	48244693	-	G	INS	EHD2	ENST00000540884	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.938:0.089	-	-	-	no_errors	EHD2	HGNC	ENSG00000024422	tier1			9	0	0.00	10	4	28.57
CAPN13	0	genome.wustl.edu	37	2	31010173	31010173	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	2	31010173	31010173	G	T	SNP	CAPN13	ENST00000295055	human	ensembl	74_37	-1	known	missense	c.19	p.P7T	0.000	NULL	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN13	HGNC	ENSG00000162949	tier1	-	-	48	0	0.00	35	4	10.26
TFAP4	0	genome.wustl.edu	37	16	4308095	4308095	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	4308095	4308095	C	G	SNP	TFAP4	ENST00000204517	human	ensembl	74_37	-1	known	missense	c.978	p.Q326H	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TFAP4	HGNC	ENSG00000090447	tier1	-	-	54	0	0.00	26	10	27.78
ULK1	0	genome.wustl.edu	37	12	132403074	132403074	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	132403074	132403074	C	T	SNP	ULK1	ENST00000321867	human	ensembl	74_37	+1	known	missense	c.2359	p.R787C	0.965	pirsf_Ser/Thr_kin_STPK_Ulk-1/2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ser/Thr_kinase_C,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ULK1	HGNC	ENSG00000177169	tier1	-	-	96	0	0.00	53	28	34.57
IFNW1	0	genome.wustl.edu	37	9	21141119	21141119	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	21141119	21141119	G	A	SNP	IFNW1	ENST00000380229	human	ensembl	74_37	-1	known	missense	c.451	p.R151C	0.000	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNW1	HGNC	ENSG00000177047	tier1	rs141528866	-	39	0	0.00	18	8	30.77
ITGAD	0	genome.wustl.edu	37	16	31419212	31419212	+	Silent	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	31419212	31419212	G	T	SNP	ITGAD	ENST00000389202	human	ensembl	74_37	+1	known	silent	c.984	p.L328	0.993	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAD	HGNC	ENSG00000156886	tier1	-	-	31	0	0.00	36	4	10.00
DTX1	0	genome.wustl.edu	37	12	113515459	113515459	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	113515459	113515459	C	T	SNP	DTX1	ENST00000257600	human	ensembl	74_37	+1	known	missense	c.490	p.R164C	1.000	pfam_WWE-dom,smart_WWE-dom_subgr,pfscan_WWE-dom	pfam_WWE-dom,smart_WWE-dom_subgr,smart_Znf_RING,pfscan_WWE-dom,pfscan_Znf_RING	-	no_errors	DTX1	HGNC	ENSG00000135144	tier1	-	-	41	0	0.00	22	9	29.03
ADAM33	0	genome.wustl.edu	37	20	3650540	3650541	+	RNA	INS	-	-	CACCACC			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	3650540	3650541	-	CACCACC	INS	ADAM33	ENST00000483362	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ADAM33	HGNC	ENSG00000149451	tier1			NA	NA	NA	NA	NA	NA
CDC14A	0	genome.wustl.edu	37	1	100908566	100908567	+	RNA	INS	-	-	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	100908566	100908567	-	T	INS	CDC14A	ENST00000469387	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.384:0.000	-	-	-	no_errors	CDC14A	HGNC	ENSG00000079335	tier1			61	0	0.00	54	15	21.74
PDSS1	0	genome.wustl.edu	37	10	27031457	27031457	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	27031457	27031457	G	A	SNP	PDSS1	ENST00000376215	human	ensembl	74_37	+1	known	missense	c.1058	p.R353Q	1.000	pfam_Polyprenyl_synt,superfamily_Terpenoid_synth	pfam_Polyprenyl_synt,superfamily_Terpenoid_synth	-	no_errors	PDSS1	HGNC	ENSG00000148459	tier1	-	-	45	0	0.00	23	7	23.33
TNRC18	0	genome.wustl.edu	37	7	5352432	5352432	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	5352432	5352432	G	A	SNP	TNRC18	ENST00000399537	human	ensembl	74_37	-1	known	missense	c.8090	p.A2697V	0.652	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	TNRC18	HGNC	ENSG00000182095	tier1	-	-	34	0	0.00	23	17	40.48
LRRK1	0	genome.wustl.edu	37	15	101464888	101464888	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	101464888	101464888	G	A	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	silent	c.51	p.P17	0.622	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237	tier1	-	-	77	0	0.00	48	12	20.00
CTDP1	0	genome.wustl.edu	37	18	77513722	77513722	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	18	77513722	77513722	G	A	SNP	CTDP1	ENST00000299543	human	ensembl	74_37	+1	known	missense	c.2818	p.E940K	1.000	pfam_FCP1_C	pfam_FCP1_C,pfam_NIF,superfamily_HAD-like_dom,superfamily_BRCT_dom,superfamily_Single_hybrid_motif,smart_NIF,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_NIF,tigrfam_FCP1_euk	-	no_errors	CTDP1	HGNC	ENSG00000060069	tier1	rs139811552	-	59	0	0.00	31	14	31.11
ZNF623	0	genome.wustl.edu	37	8	144732482	144732482	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	8	144732482	144732482	G	T	SNP	ZNF623	ENST00000501748	human	ensembl	74_37	+1	known	missense	c.440	p.G147V	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF623	HGNC	ENSG00000183309	tier1	-	-	15	0	0.00	17	8	32.00
DLEC1	0	genome.wustl.edu	37	3	38136528	38136528	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	38136528	38136528	A	G	SNP	DLEC1	ENST00000346219	human	ensembl	74_37	+1	known	missense	c.2078	p.D693G	1.000	NULL	superfamily_PapD-like	-	no_errors	DLEC1	HGNC	ENSG00000008226	tier1	-	-	21	0	0.00	7	8	53.33
ADAMTSL1	0	genome.wustl.edu	37	9	18777457	18777457	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	9	18777457	18777457	G	A	SNP	ADAMTSL1	ENST00000380548	human	ensembl	74_37	+1	novel	missense	c.3230	p.R1077H	0.998	NULL	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031	tier1	-	-	42	0	0.00	18	12	40.00
ZMYND8	0	genome.wustl.edu	37	20	45910883	45910883	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	45910883	45910883	C	T	SNP	ZMYND8	ENST00000536340	human	ensembl	74_37	-1	known	missense	c.982	p.G328R	1.000	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	pfam_DUF3544,pfam_Bromodomain,pfam_PWWP_dom,pfam_Znf_PHD-finger,pfam_Znf_MYND,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_MYND,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	ZMYND8	HGNC	ENSG00000101040	tier1	-	-	75	0	0.00	52	27	34.18
TELO2	0	genome.wustl.edu	37	16	1547054	1547054	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	1547054	1547054	G	A	SNP	TELO2	ENST00000262319	human	ensembl	74_37	+1	known	missense	c.631	p.V211M	0.791	NULL	pfam_Telomere_length_regulation_dom,superfamily_ARM-type_fold	-	no_errors	TELO2	HGNC	ENSG00000100726	tier1	-	-	40	0	0.00	36	7	16.28
TTLL5	0	genome.wustl.edu	37	14	76184259	76184259	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	14	76184259	76184259	C	T	SNP	TTLL5	ENST00000298832	human	ensembl	74_37	+1	known	missense	c.796	p.H266Y	1.000	pfam_TTL/TTLL_fam	pfam_TTL/TTLL_fam	-	no_errors	TTLL5	HGNC	ENSG00000119685	tier1	-	-	27	0	0.00	36	4	10.00
ALDH4A1	0	genome.wustl.edu	37	1	19209672	19209672	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	19209672	19209672	C	T	SNP	ALDH4A1	ENST00000290597	human	ensembl	74_37	-1	known	silent	c.624	p.S208	0.030	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,tigrfam_1-pyrroline-5-COlate_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,tigrfam_1-pyrroline-5-COlate_DH	-	no_errors	ALDH4A1	HGNC	ENSG00000159423	tier1	rs142063145	-	94	0	0.00	59	13	17.57
RB1	0	genome.wustl.edu	37	13	48947629	48947629	+	Splice_Site	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	13	48947629	48947629	G	A	SNP	RB1	ENST00000267163	human	ensembl	74_37	+1	known	splice_site	c.1215+1	e12+1	1.000	-	-	-	no_errors	RB1	HGNC	ENSG00000139687	tier1	-	-	27	0	0.00	24	15	38.46
ZNF835	0	genome.wustl.edu	37	19	57175104	57175104	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	57175104	57175104	G	A	SNP	ZNF835	ENST00000537055	human	ensembl	74_37	-1	known	missense	c.1463	p.A488V	0.280	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF835	HGNC	ENSG00000127903	tier1	-	-	26	0	0.00	26	10	27.78
KIF9-AS1	0	genome.wustl.edu	37	3	47281289	47281289	+	RNA	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	47281289	47281289	A	G	SNP	KIF9-AS1	ENST00000429315	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KIF9-AS1	HGNC	ENSG00000227398	tier1	-	-	69	0	0.00	33	13	28.26
TSC2	0	genome.wustl.edu	37	16	2126103	2126103	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	2126103	2126103	G	A	SNP	TSC2	ENST00000219476	human	ensembl	74_37	+1	known	missense	c.2674	p.V892I	1.000	pfam_Tuberin-type_domain,prints_Tuberin	pfam_Tuberin-type_domain,pfam_Tuberin_N,pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom,prints_Tuberin	-	no_errors	TSC2	HGNC	ENSG00000103197	tier1	-	-	60	0	0.00	60	18	23.08
GPCPD1	0	genome.wustl.edu	37	20	5564938	5564938	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	20	5564938	5564938	A	G	SNP	GPCPD1	ENST00000379019	human	ensembl	74_37	-1	known	missense	c.338	p.F113S	1.000	superfamily_Carb-bd-like_fold,pfscan_CBM_fam20	pfam_GlyceroP-diester-Pdiesterase,pfam_CBM_fam20,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_Carb-bd-like_fold,pfscan_CBM_fam20	-	no_errors	GPCPD1	HGNC	ENSG00000125772	tier1	-	-	128	0	0.00	68	39	36.45
ZNF610	0	genome.wustl.edu	37	19	52856965	52856965	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	52856965	52856965	G	A	SNP	ZNF610	ENST00000321287	human	ensembl	74_37	+1	known	missense	c.94	p.E32K	0.891	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF610	HGNC	ENSG00000167554	tier1	-	-	117	0	0.00	86	25	22.52
PRLHR	0	genome.wustl.edu	37	10	120353718	120353718	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	120353718	120353718	G	A	SNP	PRLHR	ENST00000239032	human	ensembl	74_37	-1	known	missense	c.1039	p.R347C	0.995	pfam_7TM_GPCR_olfarory/Srsx,prints_Prolrel_pep_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Prolrel_pep_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	PRLHR	HGNC	ENSG00000119973	tier1	-	-	39	0	0.00	27	9	25.00
LENG8	0	genome.wustl.edu	37	19	54967838	54967838	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	54967838	54967838	G	A	SNP	LENG8	ENST00000326764	human	ensembl	74_37	+1	known	missense	c.1469	p.R490H	1.000	NULL	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25	-	no_errors	LENG8	HGNC	ENSG00000167615	tier1	-	-	65	0	0.00	54	17	23.94
LOC100190940	0	genome.wustl.edu	37	12	130521541	130521541	+	RNA	SNP	G	G	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	130521541	130521541	G	T	SNP	LOC100190940	ENST00000291374	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.142	-	-	-	no_errors	RP11-474D1.3	Clone_based_vega_gene	ENSG00000214039	tier1	-	-	17	0	0.00	8	6	42.86
GRK7	0	genome.wustl.edu	37	3	141499460	141499460	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	141499460	141499460	G	A	SNP	GRK7	ENST00000264952	human	ensembl	74_37	+1	known	missense	c.857	p.R286H	0.070	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	GRK7	HGNC	ENSG00000114124	tier1	-	-	26	0	0.00	21	11	34.38
RFPL1	0	genome.wustl.edu	37	22	29837909	29837909	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	22	29837909	29837909	T	C	SNP	RFPL1	ENST00000354373	human	ensembl	74_37	+1	known	missense	c.752	p.M251T	0.857	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_RDM_domain_RFPL,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	RFPL1	HGNC	ENSG00000128250	tier1	-	-	146	0	0.00	117	37	23.87
FOXJ3	0	genome.wustl.edu	37	1	42657144	42657144	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	1	42657144	42657144	G	A	SNP	FOXJ3	ENST00000361346	human	ensembl	74_37	-1	known	missense	c.1181	p.P394L	0.981	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXJ3	HGNC	ENSG00000198815	tier1	-	-	48	0	0.00	39	25	38.46
C11orf57	0	genome.wustl.edu	37	11	111952739	111952739	+	Silent	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	111952739	111952739	T	C	SNP	C11orf57	ENST00000393047	human	ensembl	74_37	+1	known	silent	c.354	p.P118	1.000	NULL	NULL	-	no_errors	C11orf57	HGNC	ENSG00000150776	tier1	-	-	66	0	0.00	26	19	42.22
TSSC4	0	genome.wustl.edu	37	11	2423909	2423909	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	2423909	2423909	G	A	SNP	TSSC4	ENST00000333256	human	ensembl	74_37	+1	known	missense	c.46	p.E16K	0.000	NULL	NULL	-	no_errors	TSSC4	HGNC	ENSG00000184281	tier1	-	-	53	0	0.00	34	9	20.93
ANKRD13A	0	genome.wustl.edu	37	12	110474119	110474119	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	110474119	110474119	C	T	SNP	ANKRD13A	ENST00000261739	human	ensembl	74_37	+1	known	silent	c.1563	p.D521	0.066	smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif	pfam_ANKRD13,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ubiquitin-int_motif,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Ubiquitin-int_motif	-	no_errors	ANKRD13A	HGNC	ENSG00000076513	tier1	-	-	34	0	0.00	41	9	18.00
CPA3	0	genome.wustl.edu	37	3	148601470	148601470	+	Silent	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	148601470	148601470	G	A	SNP	CPA3	ENST00000296046	human	ensembl	74_37	+1	known	silent	c.849	p.T283	0.972	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA3	HGNC	ENSG00000163751	tier1	rs200538548	-	39	0	0.00	47	13	21.67
FXR1	0	genome.wustl.edu	37	3	180680695	180680695	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	180680695	180680695	C	T	SNP	FXR1	ENST00000357559	human	ensembl	74_37	+1	known	missense	c.1102	p.R368C	1.000	pfam_Frag_X_MRP_fam	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet-like_dom,superfamily_NA-bd_OB-fold,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FXR1	HGNC	ENSG00000114416	tier1	-	-	72	0	0.00	62	23	27.06
KIAA1147	0	genome.wustl.edu	37	7	141364761	141364761	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	141364761	141364761	G	A	SNP	KIAA1147	ENST00000536163	human	ensembl	74_37	-1	known	missense	c.1046	p.P349L	1.000	pfam_DUF2347	pfam_DUF2347	-	no_errors	KIAA1147	HGNC	ENSG00000257093	tier1	-	-	24	0	0.00	15	7	31.82
SYNJ1	0	genome.wustl.edu	37	21	34060616	34060616	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	21	34060616	34060616	C	A	SNP	SYNJ1	ENST00000433931	human	ensembl	74_37	-1	known	missense	c.968	p.R323M	1.000	pfam_Syja_N,pfscan_Syja_N	pfam_Syja_N,pfam_Endo/exonuclease/phosphatase,pfam_DUF1866,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ1	HGNC	ENSG00000159082	tier1	-	-	62	0	0.00	40	18	31.03
DUOX1	0	genome.wustl.edu	37	15	45455992	45455992	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	15	45455992	45455992	T	C	SNP	DUOX1	ENST00000321429	human	ensembl	74_37	+1	known	missense	c.4409	p.I1470T	1.000	pfam_Fe_red_NAD-bd_6	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,prints_Haem_peroxidase_animal_subgr,prints_Recoverin,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal	-	no_errors	DUOX1	HGNC	ENSG00000137857	tier1	-	-	61	0	0.00	42	19	31.15
ADARB2	0	genome.wustl.edu	37	10	1262943	1262943	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	1262943	1262943	C	T	SNP	ADARB2	ENST00000381312	human	ensembl	74_37	-1	known	missense	c.1630	p.V544I	1.000	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADARB2	HGNC	ENSG00000185736	tier1	rs151300637	-	118	0	0.00	51	28	35.00
OR6C4	0	genome.wustl.edu	37	12	55945205	55945205	+	Silent	SNP	C	C	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	12	55945205	55945205	C	A	SNP	OR6C4	ENST00000394256	human	ensembl	74_37	+1	known	silent	c.195	p.S65	0.118	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C4	HGNC	ENSG00000179626	tier1	-	-	42	0	0.00	22	4	15.38
LILRB1	0	genome.wustl.edu	37	19	55147800	55147800	+	RNA	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	55147800	55147800	C	T	SNP	LILRB1	ENST00000462628	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LILRB1	HGNC	ENSG00000104972	tier1	-	-	29	0	0.00	8	7	46.67
PIK3C2A	0	genome.wustl.edu	37	11	17121490	17121490	+	Silent	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	17121490	17121490	A	G	SNP	PIK3C2A	ENST00000265970	human	ensembl	74_37	-1	known	silent	c.4035	p.L1345	0.997	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,pfam_Phox,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,superfamily_Phox,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,smart_Phox,pfscan_C2_dom,pfscan_Phox,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C2A	HGNC	ENSG00000011405	tier1	-	-	130	0	0.00	91	40	30.53
STAB1	0	genome.wustl.edu	37	3	52554459	52554459	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	52554459	52554459	G	A	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	missense	c.5543	p.R1848Q	1.000	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pfscan_FAS1_domain	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327	tier1	-	-	26	0	0.00	7	6	46.15
TENM2	0	genome.wustl.edu	37	5	167552021	167552021	+	Silent	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	5	167552021	167552021	C	T	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	silent	c.2175	p.C725	0.929	pfam_EGF_extracell,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934	tier1	-	-	48	0	0.00	31	10	24.39
ADRBK1	0	genome.wustl.edu	37	11	67049161	67049161	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	11	67049161	67049161	C	T	SNP	ADRBK1	ENST00000308595	human	ensembl	74_37	+1	known	missense	c.788	p.T263M	0.997	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	ADRBK1	HGNC	ENSG00000173020	tier1	-	-	34	0	0.00	15	4	21.05
OSBPL10	0	genome.wustl.edu	37	3	31871582	31871582	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	31871582	31871582	C	T	SNP	OSBPL10	ENST00000396556	human	ensembl	74_37	-1	known	missense	c.679	p.A227T	0.998	NULL	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL10	HGNC	ENSG00000144645	tier1	-	-	55	0	0.00	29	11	27.50
CSF2RA	0	genome.wustl.edu	37	X	1407438	1407438	+	Silent	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	X	1407438	1407438	A	G	SNP	CSF2RA	ENST00000417535	human	ensembl	74_37	+1	known	silent	c.246	p.T82	0.002	NULL	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	-	no_errors	CSF2RA	HGNC	ENSG00000198223	tier1	-	-	115	0	0.00	98	44	30.99
ABCA10	0	genome.wustl.edu	37	17	67218780	67218780	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	17	67218780	67218780	T	-	DEL	ABCA10	ENST00000269081	human	ensembl	74_37	-1	known	frame_shift_del	c.93	p.K31fs	0.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA10	HGNC	ENSG00000154263	tier1			116	0	0.00	121	35	22.44
HAPLN4	0	genome.wustl.edu	37	19	19369469	19369469	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	19	19369469	19369469	C	T	SNP	HAPLN4	ENST00000291481	human	ensembl	74_37	-1	known	missense	c.680	p.R227Q	1.000	pfam_Link,superfamily_C-type_lectin_fold,smart_Link,pfscan_Link,prints_Link	pfam_Link,pfam_Ig_V-set,superfamily_C-type_lectin_fold,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Link,pfscan_Link,pfscan_Ig-like_dom,prints_Link	-	no_errors	HAPLN4	HGNC	ENSG00000187664	tier1	-	-	132	0	0.00	86	29	25.22
ATXN7L1	0	genome.wustl.edu	37	7	105254802	105254804	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	105254802	105254804	GAG	-	DEL	ATXN7L1	ENST00000419735	human	ensembl	74_37	-1	known	in_frame_del	c.1979_1977	p.S661in_frame_del	0.098:0.098:0.097	NULL	pfam_SCA7_dom	-	no_errors	ATXN7L1	HGNC	ENSG00000146776	tier1			34	0	0.00	29	3	9.38
STXBP5L	0	genome.wustl.edu	37	3	121132018	121132018	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	3	121132018	121132018	C	T	SNP	STXBP5L	ENST00000273666	human	ensembl	74_37	+1	known	missense	c.3034	p.R1012C	1.000	pfam_Lgl_C_dom	pfam_LLGL2,pfam_WD40_repeat,pfam_Lgl_C_dom,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,pfscan_Synaptobrevin,prints_Lethal2_giant	-	no_errors	STXBP5L	HGNC	ENSG00000145087	tier1	-	-	58	0	0.00	40	16	28.57
GLIS2	0	genome.wustl.edu	37	16	4383462	4383462	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	16	4383462	4383462	G	A	SNP	GLIS2	ENST00000262366	human	ensembl	74_37	+1	known	missense	c.287	p.S96N	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLIS2	HGNC	ENSG00000126603	tier1	-	-	76	0	0.00	58	25	29.76
DPY19L2P1	0	genome.wustl.edu	37	7	35121280	35121280	+	RNA	SNP	G	G	A			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	7	35121280	35121280	G	A	SNP	DPY19L2P1	ENST00000458672	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.916	-	-	-	no_errors	DPY19L2P1	HGNC	ENSG00000189212	tier1	-	-	98	0	0.00	69	25	26.60
FAM188A	0	genome.wustl.edu	37	10	15902295	15902295	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-AB32-01A-11D-A417-09	TCGA-DX-AB32-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ec03515c-a013-4a2d-82e0-8a2b4cd25321	5706f461-3e8d-4d11-99cd-adb6d97ae6ca	10	15902295	15902295	A	G	SNP	FAM188A	ENST00000277632	human	ensembl	74_37	-1	known	missense	c.4	p.S2P	1.000	NULL	NULL	-	no_errors	FAM188A	HGNC	ENSG00000148481	tier1	-	-	69	0	0.00	35	15	30.00
