Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
OR2H1	0	genome.wustl.edu	37	6	29430039	29430039	+	Missense_Mutation	SNP	C	C	G			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	6	29430039	29430039	C	G	SNP	OR2H1	ENST00000377132	human	ensembl	74_37	+1	known	missense	c.493	p.P165A	0.003	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2H1	HGNC	ENSG00000204688	tier1	-	-	37	0	0.00	36	16	30.77
OR4C15	0	genome.wustl.edu	37	11	55322430	55322430	+	Silent	SNP	T	T	C			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	11	55322430	55322430	T	C	SNP	OR4C15	ENST00000314644	human	ensembl	74_37	+1	known	silent	c.648	p.T216	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C15	HGNC	ENSG00000181939	tier1	-	-	51	0	0.00	37	7	15.91
ENSG00000200485	0	genome.wustl.edu	37	11	33218134	33218134	+	RNA	SNP	A	A	G			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	11	33218134	33218134	A	G	SNP	ENSG00000200485	ENST00000363615	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.017	-	-	-	no_errors	Y_RNA	RFAM	ENSG00000200485	tier1	-	-	25	0	0.00	10	7	41.18
TRIM64C	0	genome.wustl.edu	37	11	49080611	49080611	+	Silent	SNP	G	G	A			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	11	49080611	49080611	G	A	SNP	TRIM64C	ENST00000530230	human	ensembl	74_37	-1	known	silent	c.54	p.C18	0.106	pfscan_Znf_RING	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM64C	HGNC	ENSG00000214891	tier1	-	-	99	0	0.00	66	36	35.29
ZSCAN30	0	genome.wustl.edu	37	18	32833487	32833487	+	Missense_Mutation	SNP	C	C	G			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	18	32833487	32833487	C	G	SNP	ZSCAN30	ENST00000333206	human	ensembl	74_37	-1	known	missense	c.1412	p.C471S	0.999	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN30	HGNC	ENSG00000186814	tier1	-	-	73	0	0.00	59	26	30.59
FAT1	0	genome.wustl.edu	37	4	187524885	187524885	+	Missense_Mutation	SNP	G	G	C			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	4	187524885	187524885	G	C	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	missense	c.10795	p.L3599V	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857	tier1	-	-	47	0	0.00	42	4	8.70
CORIN	0	genome.wustl.edu	37	4	47625659	47625659	+	Silent	SNP	G	G	A			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	4	47625659	47625659	G	A	SNP	CORIN	ENST00000273857	human	ensembl	74_37	-1	known	silent	c.2469	p.P823	0.990	pirsf_Peptidase_S1A_corin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Peptidase_S1A_corin,pfam_Peptidase_S1,pfam_LDrepeatLR_classA_rpt,pfam_Frizzled_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Frizzled_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_Srcr_rcpt-rel,smart_Frizzled_dom,smart_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1,prints_LDrepeatLR_classA_rpt,prints_Peptidase_S1A,pfscan_Frizzled_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1	-	no_errors	CORIN	HGNC	ENSG00000145244	tier1	-	-	49	0	0.00	24	8	25.00
C9orf43	0	genome.wustl.edu	37	9	116176117	116176117	+	Missense_Mutation	SNP	C	C	T			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	9	116176117	116176117	C	T	SNP	C9orf43	ENST00000288462	human	ensembl	74_37	+1	known	missense	c.230	p.T77I	0.000	NULL	NULL	-	no_errors	C9orf43	HGNC	ENSG00000157653	tier1	-	-	144	0	0.00	85	41	32.54
ZNF492	0	genome.wustl.edu	37	19	22847104	22847104	+	Frame_Shift_Del	DEL	C	C	-			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	19	22847104	22847104	C	-	DEL	ZNF492	ENST00000456783	human	ensembl	74_37	+1	known	frame_shift_del	c.633	p.T213fs	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF492	HGNC	ENSG00000229676	tier1			40	0	0.00	21	11	34.38
BAI2	0	genome.wustl.edu	37	1	32221699	32221699	+	Missense_Mutation	SNP	G	G	T			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	1	32221699	32221699	G	T	SNP	BAI2	ENST00000373658	human	ensembl	74_37	-1	known	missense	c.739	p.L247M	0.995	NULL	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI2	HGNC	ENSG00000121753	tier1	-	-	19	0	0.00	16	4	20.00
NAV1	0	genome.wustl.edu	37	1	201786318	201786318	+	Missense_Mutation	SNP	C	C	T			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	1	201786318	201786318	C	T	SNP	NAV1	ENST00000367296	human	ensembl	74_37	+1	known	missense	c.5443	p.P1815S	1.000	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	NAV1	HGNC	ENSG00000134369	tier1	-	-	35	0	0.00	13	14	51.85
SPTBN4	0	genome.wustl.edu	37	19	41063133	41063133	+	Missense_Mutation	SNP	G	G	A			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	19	41063133	41063133	G	A	SNP	SPTBN4	ENST00000352632	human	ensembl	74_37	+1	known	missense	c.5494	p.A1832T	0.999	pirsf_Spectrin_bsu	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN4	HGNC	ENSG00000160460	tier1	-	-	25	0	0.00	18	9	33.33
GOLGA8O	0	genome.wustl.edu	37	15	32737911	32737911	+	Missense_Mutation	SNP	A	A	G			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	15	32737911	32737911	A	G	SNP	GOLGA8O	ENST00000509311	human	ensembl	74_37	-1	novel	missense	c.1475	p.I492T	1.000	NULL	NULL	-	no_errors	GOLGA8O	HGNC	ENSG00000206127	tier1	rs202039765	-	47	0	0.00	25	4	13.33
NRXN1	0	genome.wustl.edu	37	2	50779907	50779907	+	Missense_Mutation	SNP	T	T	G			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	2	50779907	50779907	T	G	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	missense	c.1553	p.H518P	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	-	-	61	0	0.00	46	15	24.59
TBC1D20	0	genome.wustl.edu	37	20	418414	418414	+	RNA	DEL	T	T	-			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	20	418414	418414	T	-	DEL	TBC1D20	ENST00000461188	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	TBC1D20	HGNC	ENSG00000125875	tier1			66	0	0.00	29	3	9.38
COX16	0	genome.wustl.edu	37	14	70793016	70793016	+	RNA	DEL	A	A	-			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	14	70793016	70793016	A	-	DEL	COX16	ENST00000557612	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	COX16	HGNC	ENSG00000133983	tier1			42	0	0.00	34	3	8.11
L3MBTL4	0	genome.wustl.edu	37	18	6311562	6311562	+	Silent	SNP	G	G	A			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	18	6311562	6311562	G	A	SNP	L3MBTL4	ENST00000284898	human	ensembl	74_37	-1	known	silent	c.63	p.D21	0.002	NULL	pfam_Mbt,pfam_SAM_type1,pfam_Znf_C2HC,pfam_SAM_2,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt,pfscan_SAM	-	no_errors	L3MBTL4	HGNC	ENSG00000154655	tier1	-	-	54	0	0.00	42	20	32.26
SCGN	0	genome.wustl.edu	37	6	25701446	25701446	+	Silent	SNP	C	C	T			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	6	25701446	25701446	C	T	SNP	SCGN	ENST00000377961	human	ensembl	74_37	+1	known	silent	c.714	p.S238	0.384	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	SCGN	HGNC	ENSG00000079689	tier1	-	-	69	0	0.00	38	19	33.33
VPS13C	0	genome.wustl.edu	37	15	62234169	62234169	+	Missense_Mutation	SNP	T	T	C			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	15	62234169	62234169	T	C	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	missense	c.5246	p.Q1749R	0.999	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	tier1	-	-	33	0	0.00	12	27	69.23
ITGAX	0	genome.wustl.edu	37	16	31374054	31374054	+	Missense_Mutation	SNP	G	G	T			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	16	31374054	31374054	G	T	SNP	ITGAX	ENST00000268296	human	ensembl	74_37	+1	known	missense	c.1339	p.A447S	0.130	smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAX	HGNC	ENSG00000140678	tier1	-	-	63	0	0.00	45	4	8.16
CCDC83	0	genome.wustl.edu	37	11	85597395	85597395	+	Missense_Mutation	SNP	G	G	T			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	11	85597395	85597395	G	T	SNP	CCDC83	ENST00000280245	human	ensembl	74_37	+1	known	missense	c.496	p.A166S	0.998	NULL	NULL	-	no_errors	CCDC83	HGNC	ENSG00000150676	tier1	-	-	34	0	0.00	31	4	11.43
TRAPPC8	0	genome.wustl.edu	37	18	29522574	29522574	+	Nonsense_Mutation	SNP	C	C	A			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	18	29522574	29522574	C	A	SNP	TRAPPC8	ENST00000283351	human	ensembl	74_37	-1	known	nonsense	c.154	p.E52*	1.000	NULL	NULL	-	no_errors	TRAPPC8	HGNC	ENSG00000153339	tier1	-	-	42	0	0.00	43	4	8.51
VWA8	0	genome.wustl.edu	37	13	42295680	42295680	+	Missense_Mutation	SNP	G	G	T			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	13	42295680	42295680	G	T	SNP	VWA8	ENST00000379310	human	ensembl	74_37	-1	known	missense	c.2790	p.N930K	1.000	superfamily_P-loop_NTPase	pfam_ATPase_dyneun-rel_AAA,pfam_VWF_A,superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA8	HGNC	ENSG00000102763	tier1	-	-	37	0	0.00	15	3	16.67
RMI1	0	genome.wustl.edu	37	9	86617205	86617205	+	Missense_Mutation	SNP	G	G	A			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	9	86617205	86617205	G	A	SNP	RMI1	ENST00000325875	human	ensembl	74_37	+1	known	missense	c.1304	p.S435N	0.000	NULL	pfam_DUF1767	-	no_errors	RMI1	HGNC	ENSG00000178966	tier1	-	-	37	0	0.00	23	4	14.81
TRHDE	0	genome.wustl.edu	37	12	72863625	72863625	+	Missense_Mutation	SNP	C	C	A			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	12	72863625	72863625	C	A	SNP	TRHDE	ENST00000261180	human	ensembl	74_37	+1	known	missense	c.1268	p.P423H	1.000	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657	tier1	-	-	99	0	0.00	329	276	45.62
CACNA1A	0	genome.wustl.edu	37	19	13616929	13616929	+	Missense_Mutation	SNP	C	C	T			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	19	13616929	13616929	C	T	SNP	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	missense	c.110	p.R37Q	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837	tier1	-	-	26	0	0.00	23	8	25.81
CLASP1	0	genome.wustl.edu	37	2	122287836	122287836	+	Silent	SNP	C	C	T			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	2	122287836	122287836	C	T	SNP	CLASP1	ENST00000263710	human	ensembl	74_37	-1	known	silent	c.261	p.A87	0.908	pfam_CLASP_N_dom,superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP1	HGNC	ENSG00000074054	tier1	-	-	86	0	0.00	51	32	38.55
CD96	0	genome.wustl.edu	37	3	111368640	111368640	+	Missense_Mutation	SNP	T	T	C			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	3	111368640	111368640	T	C	SNP	CD96	ENST00000283285	human	ensembl	74_37	+1	known	missense	c.1745	p.M582T	1.000	NULL	smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	CD96	HGNC	ENSG00000153283	tier1	-	-	58	0	0.00	46	4	8.00
FAT1	0	genome.wustl.edu	37	4	187630453	187630453	+	Missense_Mutation	SNP	C	C	T			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	4	187630453	187630453	C	T	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	missense	c.529	p.D177N	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857	tier1	-	-	78	0	0.00	53	17	24.29
ADD1	0	genome.wustl.edu	37	4	2930211	2930211	+	Silent	SNP	G	G	A			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	4	2930211	2930211	G	A	SNP	ADD1	ENST00000264758	human	ensembl	74_37	+1	known	silent	c.2268	p.P756	0.886	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD1	HGNC	ENSG00000087274	tier1	-	-	29	0	0.00	21	19	47.50
SLC31A2	0	genome.wustl.edu	37	9	115923945	115923945	+	Nonsense_Mutation	SNP	C	C	G			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	9	115923945	115923945	C	G	SNP	SLC31A2	ENST00000259392	human	ensembl	74_37	+1	known	nonsense	c.230	p.S77*	0.274	pfam_Cop_transporter	pfam_Cop_transporter	-	no_errors	SLC31A2	HGNC	ENSG00000136867	tier1	-	-	41	0	0.00	15	4	21.05
LOC101927430	0	genome.wustl.edu	37	18	65475838	65475839	+	RNA	INS	-	-	AAA			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	18	65475838	65475839	-	AAA	INS	LOC101927430	ENST00000580659	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005:0.008	-	-	-	no_errors	RP11-638L3.3	Clone_based_vega_gene	ENSG00000265555	tier1			8	0	0.00	8	2	20.00
TDRD3	0	genome.wustl.edu	37	13	61103340	61103340	+	Nonsense_Mutation	SNP	G	G	T			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	13	61103340	61103340	G	T	SNP	TDRD3	ENST00000535286	human	ensembl	74_37	+1	known	nonsense	c.1981	p.E661*	1.000	pfam_Tudor,pfam_Survival_motor_neuron,smart_Tudor,pfscan_Tudor	pfam_DUF1767,pfam_Tudor,pfam_Survival_motor_neuron,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,smart_Tudor,pfscan_Tudor,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TDRD3	HGNC	ENSG00000083544	tier1	-	-	48	0	0.00	20	3	13.04
USH1C	0	genome.wustl.edu	37	11	17554814	17554814	+	Missense_Mutation	SNP	C	C	T			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	11	17554814	17554814	C	T	SNP	USH1C	ENST00000005226	human	ensembl	74_37	-1	known	missense	c.92	p.R31Q	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	USH1C	HGNC	ENSG00000006611	tier1	-	-	10	0	0.00	11	7	38.89
C1orf110	0	genome.wustl.edu	37	1	162822950	162822950	+	Missense_Mutation	SNP	G	G	T			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	1	162822950	162822950	G	T	SNP	C1orf110	ENST00000367912	human	ensembl	74_37	-1	known	missense	c.586	p.P196T	0.124	NULL	NULL	-	no_errors	C1orf110	HGNC	ENSG00000185860	tier1	-	-	70	0	0.00	42	4	8.70
HELZ2	0	genome.wustl.edu	37	20	62198221	62198221	+	Silent	SNP	G	G	T			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	20	62198221	62198221	G	T	SNP	HELZ2	ENST00000467148	human	ensembl	74_37	-1	known	silent	c.2490	p.I830	1.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	HELZ2	HGNC	ENSG00000130589	tier1	-	-	27	0	0.00	26	4	13.33
NUDT11	0	genome.wustl.edu	37	X	51239296	51239309	+	Frame_Shift_Del	DEL	TCCTCGAGGCAGCC	TCCTCGAGGCAGCC	-			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	TCCTCGAGGCAGCC	TCCTCGAGGCAGCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	X	51239296	51239309	TCCTCGAGGCAGCC	-	DEL	NUDT11	ENST00000375992	human	ensembl	74_37	-1	known	frame_shift_del	c.1	p.M1fs	0.928	superfamily_NUDIX_hydrolase_dom-like	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	NUDT11	HGNC	ENSG00000196368	tier1			NA	NA	NA	NA	NA	NA
DPF2	0	genome.wustl.edu	37	11	65111502	65111502	+	Missense_Mutation	SNP	C	C	G			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	11	65111502	65111502	C	G	SNP	DPF2	ENST00000528416	human	ensembl	74_37	+1	known	missense	c.599	p.S200C	0.994	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_C2H2-like,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_Znf_C2H2	-	no_errors	DPF2	HGNC	ENSG00000133884	tier1	-	-	29	0	0.00	24	14	36.84
PSMD9	0	genome.wustl.edu	37	12	122340949	122340949	+	Missense_Mutation	SNP	C	C	T			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	12	122340949	122340949	C	T	SNP	PSMD9	ENST00000541212	human	ensembl	74_37	+1	known	missense	c.491	p.S164F	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ	-	no_errors	PSMD9	HGNC	ENSG00000110801	tier1	-	-	45	0	0.00	54	16	22.86
CACNA1C	0	genome.wustl.edu	37	12	2614008	2614008	+	Missense_Mutation	SNP	G	G	C			TCGA-FX-A3NK-01A-11D-A21Q-09	TCGA-FX-A3NK-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8e94e3f-cfa9-4884-af2a-cbbb3cb26bcb	31fec909-203b-4e40-bc0c-abdc21b42849	12	2614008	2614008	G	C	SNP	CACNA1C	ENST00000347598	human	ensembl	74_37	+1	known	missense	c.1114	p.V372L	1.000	pfam_Ion_trans_dom,prints_VDCCAlpha1	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCC_L_a1csu,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1C	HGNC	ENSG00000151067	tier1	-	-	71	0	0.00	117	24	17.02
