Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
CTTNBP2	0	genome.wustl.edu	37	7	117364695	117364695	+	Missense_Mutation	SNP	C	C	G			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	7	117364695	117364695	C	G	SNP	CTTNBP2	ENST00000160373	human	ensembl	74_37	-1	known	missense	c.4353	p.E1451D	0.743	NULL	pfam_Cortactin-binding_p2_N,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CTTNBP2	HGNC	ENSG00000077063	tier1	-	-	33	0	0.00	31	22	41.51
POTEG	0	genome.wustl.edu	37	14	19553472	19553472	+	Missense_Mutation	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	14	19553472	19553472	G	A	SNP	POTEG	ENST00000409832	human	ensembl	74_37	+1	known	missense	c.56	p.G19D	0.007	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEG	HGNC	ENSG00000222036	tier1	-	-	97	0	0.00	114	22	16.18
ABCB5	0	genome.wustl.edu	37	7	20725334	20725334	+	Missense_Mutation	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	7	20725334	20725334	G	A	SNP	ABCB5	ENST00000258738	human	ensembl	74_37	+1	known	missense	c.550	p.D184N	0.981	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB5	HGNC	ENSG00000004846	tier1	-	-	47	0	0.00	46	10	17.86
SCN9A	0	genome.wustl.edu	37	2	167138319	167138319	+	Splice_Site	SNP	C	C	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	2	167138319	167138319	C	A	SNP	SCN9A	ENST00000303354	human	ensembl	74_37	-1	known	splice_site	c.1978-1	e12-1	1.000	-	-	-	no_errors	SCN9A	HGNC	ENSG00000169432	tier1	-	-	35	0	0.00	31	14	31.11
GAPVD1	0	genome.wustl.edu	37	9	128025963	128025989	+	Splice_Site	DEL	CAGCACTCCATCTGTAGGTATGTCTGT	CAGCACTCCATCTGTAGGTATGTCTGT	-			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	CAGCACTCCATCTGTAGGTATGTCTGT	CAGCACTCCATCTGTAGGTATGTCTGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	9	128025963	128025989	CAGCACTCCATCTGTAGGTATGTCTGT	-	DEL	GAPVD1	ENST00000469528	human	ensembl	74_37	+1	known	splice_site_del	c.NULL	NULL	1.000:1.000:1.000:1.000:1.000:0.999:0.996:0.980:0.970:0.963:0.961:0.959:0.952:0.948:0.947:0.950:0.961:0.966:0.966:0.969:0.974:0.982:0.984:0.985:0.984:0.985:0.993	-	-	-	no_errors	GAPVD1	HGNC	ENSG00000165219	tier1			NA	NA	NA	NA	NA	NA
GDPD5	0	genome.wustl.edu	37	11	75152708	75152708	+	Silent	SNP	C	C	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	11	75152708	75152708	C	T	SNP	GDPD5	ENST00000336898	human	ensembl	74_37	-1	known	silent	c.1308	p.V436	1.000	superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors	GDPD5	HGNC	ENSG00000158555	tier1	-	-	91	0	0.00	107	15	12.30
ABCB1	0	genome.wustl.edu	37	7	87175278	87175278	+	Silent	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	7	87175278	87175278	G	A	SNP	ABCB1	ENST00000265724	human	ensembl	74_37	-1	known	silent	c.1788	p.D596	0.998	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB1	HGNC	ENSG00000085563	tier1	rs201194764	-	21	0	0.00	19	13	40.62
OS9	0	genome.wustl.edu	37	12	58112779	58112779	+	Missense_Mutation	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	12	58112779	58112779	G	A	SNP	OS9	ENST00000315970	human	ensembl	74_37	+1	known	missense	c.1414	p.E472K	0.992	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom	-	no_errors	OS9	HGNC	ENSG00000135506	tier1	-	-	23	0	0.00	226	103	31.31
SHCBP1L	0	genome.wustl.edu	37	1	182908516	182908516	+	Missense_Mutation	SNP	G	G	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	1	182908516	182908516	G	T	SNP	SHCBP1L	ENST00000367547	human	ensembl	74_37	-1	known	missense	c.871	p.Q291K	1.000	NULL	superfamily_Pectin_lyase_fold/virulence,smart_Carb-bd_sugar_hydrolysis-dom,smart_PbH1	-	no_errors	SHCBP1L	HGNC	ENSG00000157060	tier1	-	-	65	0	0.00	32	18	36.00
RAB13	0	genome.wustl.edu	37	1	153954779	153954780	+	RNA	DEL	AC	AC	-			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	1	153954779	153954780	AC	-	DEL	RAB13	ENST00000462680	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	RAB13	HGNC	ENSG00000143545	tier1			18	0	0.00	23	4	14.81
BACE1	0	genome.wustl.edu	37	11	117165988	117165988	+	Silent	SNP	G	G	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	11	117165988	117165988	G	T	SNP	BACE1	ENST00000313005	human	ensembl	74_37	-1	known	silent	c.426	p.G142	1.000	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom,prints_Pept_A1_BACE,prints_Pept_A1_BACE1,prints_Aspartic_peptidase	-	no_errors	BACE1	HGNC	ENSG00000186318	tier1	-	-	54	0	0.00	45	4	8.16
CMYA5	0	genome.wustl.edu	37	5	79031324	79031324	+	Missense_Mutation	SNP	G	G	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	5	79031324	79031324	G	T	SNP	CMYA5	ENST00000446378	human	ensembl	74_37	+1	known	missense	c.6736	p.A2246S	0.001	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309	tier1	-	-	40	0	0.00	29	3	9.38
FRG1B	0	genome.wustl.edu	37	20	29614323	29614323	+	RNA	SNP	C	C	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	20	29614323	29614323	C	T	SNP	FRG1B	ENST00000482423	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.977	-	-	-	no_errors	FRG1B	HGNC	ENSG00000149531	tier1	rs62197050	-	44	0	0.00	41	8	16.33
AFF2	0	genome.wustl.edu	37	X	148037966	148037966	+	Silent	SNP	C	C	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	X	148037966	148037966	C	T	SNP	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	silent	c.2391	p.N797	0.004	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966	tier1	-	-	28	0	0.00	21	22	51.16
SH2D4B	0	genome.wustl.edu	37	10	82394162	82394162	+	Silent	SNP	C	C	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	10	82394162	82394162	C	T	SNP	SH2D4B	ENST00000470604	human	ensembl	74_37	+1	known	silent	c.1104	p.F368	1.000	pfam_SH2,smart_SH2,pfscan_SH2	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SH2D4B	HGNC	ENSG00000178217	tier1	-	-	37	0	0.00	25	4	13.79
NBPF10	0	genome.wustl.edu	37	1	145302775	145302775	+	Missense_Mutation	SNP	T	T	G			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	1	145302775	145302775	T	G	SNP	NBPF10	ENST00000342960	human	ensembl	74_37	+1	known	missense	c.1213	p.Y405D	0.000	NULL	pfam_NBPF_dom	-	no_errors	NBPF10	HGNC	ENSG00000163386	tier1	-	-	102	0	0.00	62	13	17.33
REXO1	0	genome.wustl.edu	37	19	1819988	1819988	+	Silent	SNP	C	C	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	19	1819988	1819988	C	T	SNP	REXO1	ENST00000170168	human	ensembl	74_37	-1	known	silent	c.2595	p.V865	1.000	NULL	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	REXO1	HGNC	ENSG00000079313	tier1	-	-	61	0	0.00	406	119	22.62
ZFHX2	0	genome.wustl.edu	37	14	23991278	23991278	+	Missense_Mutation	SNP	C	C	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	14	23991278	23991278	C	T	SNP	ZFHX2	ENST00000419474	human	ensembl	74_37	-1	known	missense	c.7612	p.A2538T	0.986	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX2	HGNC	ENSG00000136367	tier1	-	-	42	0	0.00	33	15	31.25
LAMB4	0	genome.wustl.edu	37	7	107732113	107732113	+	Silent	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	7	107732113	107732113	G	A	SNP	LAMB4	ENST00000205386	human	ensembl	74_37	-1	known	silent	c.1659	p.Y553	0.796	smart_EGF_laminin,pfscan_Laminin_IV	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB4	HGNC	ENSG00000091128	tier1	-	-	39	0	0.00	36	6	14.29
RANBP17	0	genome.wustl.edu	37	5	170336734	170336734	+	Missense_Mutation	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	5	170336734	170336734	G	A	SNP	RANBP17	ENST00000523189	human	ensembl	74_37	+1	known	missense	c.559	p.D187N	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	RANBP17	HGNC	ENSG00000204764	tier1	-	-	61	0	0.00	60	6	9.09
LOC101927345	0	genome.wustl.edu	37	1	143378256	143378256	+	RNA	SNP	A	A	G			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	1	143378256	143378256	A	G	SNP	LOC101927345	ENST00000428624	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.450	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261	tier1	-	-	184	1	0.54	113	40	26.14
ENSG00000226113	0	genome.wustl.edu	37	10	38599071	38599071	+	RNA	SNP	A	A	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	10	38599071	38599071	A	T	SNP	ENSG00000226113	ENST00000450980	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-672F9.1	Clone_based_vega_gene	ENSG00000226113	tier1	-	-	68	0	0.00	58	21	26.58
INTS10	0	genome.wustl.edu	37	8	19677110	19677110	+	Missense_Mutation	SNP	T	T	C			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	8	19677110	19677110	T	C	SNP	INTS10	ENST00000397977	human	ensembl	74_37	+1	known	missense	c.224	p.V75A	1.000	NULL	NULL	-	no_errors	INTS10	HGNC	ENSG00000104613	tier1	-	-	40	0	0.00	23	11	32.35
ENSG00000266060	0	genome.wustl.edu	37	9	137741779	137741779	+	RNA	SNP	G	G	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	9	137741779	137741779	G	T	SNP	ENSG00000266060	ENST00000583817	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AL603650.4	Clone_based_ensembl_gene	ENSG00000266060	tier1	-	-	27	0	0.00	7	7	50.00
HDAC6	0	genome.wustl.edu	37	X	48682631	48682631	+	Missense_Mutation	SNP	G	G	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	X	48682631	48682631	G	T	SNP	HDAC6	ENST00000444343	human	ensembl	74_37	+1	known	missense	c.3548	p.G1183V	0.932	pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP	pfam_His_deacetylse_dom,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,prints_His_deacetylse	-	no_errors	HDAC6	HGNC	ENSG00000094631	tier1	-	-	18	0	0.00	1	26	96.30
CD200R1L	0	genome.wustl.edu	37	3	112538711	112538711	+	Silent	SNP	G	G	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	3	112538711	112538711	G	T	SNP	CD200R1L	ENST00000398214	human	ensembl	74_37	-1	known	silent	c.711	p.S237	0.001	NULL	pfam_CD80_C2-set,pfscan_Ig-like_dom	-	no_errors	CD200R1L	HGNC	ENSG00000206531	tier1	-	-	30	0	0.00	14	3	17.65
USP43	0	genome.wustl.edu	37	17	9604692	9604692	+	Missense_Mutation	SNP	G	G	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	17	9604692	9604692	G	T	SNP	USP43	ENST00000285199	human	ensembl	74_37	+1	known	missense	c.1686	p.K562N	0.963	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP43	HGNC	ENSG00000154914	tier1	-	-	41	0	0.00	31	4	11.43
ZNHIT2	0	genome.wustl.edu	37	11	64884315	64884315	+	Silent	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	11	64884315	64884315	G	A	SNP	ZNHIT2	ENST00000310597	human	ensembl	74_37	-1	known	silent	c.811	p.L271	1.000	NULL	pfam_Znf_HIT,pfscan_Znf_HIT	-	no_errors	ZNHIT2	HGNC	ENSG00000174276	tier1	-	-	28	0	0.00	34	15	30.61
MYH13	0	genome.wustl.edu	37	17	10267836	10267836	+	Silent	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	17	10267836	10267836	G	A	SNP	MYH13	ENST00000252172	human	ensembl	74_37	-1	known	silent	c.12	p.D4	0.658	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH13	HGNC	ENSG00000006788	tier1	-	-	62	0	0.00	42	30	41.67
CSNK1G3	0	genome.wustl.edu	37	5	122881404	122881404	+	Missense_Mutation	SNP	C	C	G			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	5	122881404	122881404	C	G	SNP	CSNK1G3	ENST00000360683	human	ensembl	74_37	+1	known	missense	c.47	p.A16G	1.000	NULL	pfam_Prot_kinase_dom,pfam_Casein_kinase-1_gamma_C,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CSNK1G3	HGNC	ENSG00000151292	tier1	-	-	52	0	0.00	64	16	20.00
MARS2	0	genome.wustl.edu	37	2	198570511	198570511	+	Missense_Mutation	SNP	G	G	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	2	198570511	198570511	G	T	SNP	MARS2	ENST00000282276	human	ensembl	74_37	+1	known	missense	c.382	p.A128S	0.857	pfam_Methionyl/Leucyl_tRNA_Synth,tigrfam_Met-tRNA_synth	pfam_Methionyl/Leucyl_tRNA_Synth,pfam_aa-tRNA-synth_Ia,pfam_Cys-tRNA/MSH_ligase,superfamily_tRNAsynth_1a_anticodon-bd,prints_Met-tRNA_synth,tigrfam_Met-tRNA_synth	-	no_errors	MARS2	HGNC	ENSG00000247626	tier1	-	-	44	0	0.00	45	4	8.16
RNF212	0	genome.wustl.edu	37	4	1087327	1087328	+	In_Frame_Ins	INS	-	-	CTGCCCAGGCTGGAGCCAGCC			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	4	1087327	1087328	-	CTGCCCAGGCTGGAGCCAGCC	INS	RNF212	ENST00000333673	human	ensembl	74_37	-1	known	in_frame_ins	c.722_721	p.S241in_frame_insWLAPAWAA	0.085:0.000	NULL	pfscan_Znf_RING	-	no_errors	RNF212	HGNC	ENSG00000178222	tier1			NA	NA	NA	NA	NA	NA
ZC3H12A	0	genome.wustl.edu	37	1	37947330	37947330	+	Missense_Mutation	SNP	G	G	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	1	37947330	37947330	G	T	SNP	ZC3H12A	ENST00000373087	human	ensembl	74_37	+1	known	missense	c.712	p.G238W	0.999	pfam_RNase_Zc3h12	pfam_RNase_Zc3h12	-	no_errors	ZC3H12A	HGNC	ENSG00000163874	tier1	-	-	49	0	0.00	58	34	36.96
TMEM233	0	genome.wustl.edu	37	12	120031683	120031683	+	Missense_Mutation	SNP	C	C	G			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	12	120031683	120031683	C	G	SNP	TMEM233	ENST00000426426	human	ensembl	74_37	+1	known	missense	c.30	p.F10L	0.992	NULL	pfam_CD225/Dispanin_fam	-	no_errors	TMEM233	HGNC	ENSG00000224982	tier1	-	-	44	0	0.00	74	15	16.85
MT-RNR1	0	genome.wustl.edu	37	MT	834	834	+	RNA	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	MT	834	834	G	A	SNP	MT-RNR1	ENST00000389680	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR1	HGNC	ENSG00000211459	tier1	-	-	139	0	0.00	8	28	77.78
SP1	0	genome.wustl.edu	37	12	53777058	53777058	+	Missense_Mutation	SNP	G	G	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	12	53777058	53777058	G	T	SNP	SP1	ENST00000327443	human	ensembl	74_37	+1	known	missense	c.1327	p.V443F	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP1	HGNC	ENSG00000185591	tier1	-	-	37	0	0.00	18	18	50.00
E2F4	0	genome.wustl.edu	37	16	67229794	67229796	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	16	67229794	67229796	CAG	-	DEL	E2F4	ENST00000379378	human	ensembl	74_37	+1	known	in_frame_del	c.918_920	p.S310in_frame_del	0.995:0.995:0.995	NULL	pfam_E2F_TDP	-	no_errors	E2F4	HGNC	ENSG00000205250	tier1			54	0	0.00	42	6	12.50
SGSH	0	genome.wustl.edu	37	17	78184600	78184602	+	In_Frame_Del	DEL	ACG	ACG	-			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	ACG	ACG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	17	78184600	78184602	ACG	-	DEL	SGSH	ENST00000326317	human	ensembl	74_37	-1	known	in_frame_del	c.1160_1158	p.V387in_frame_del	0.995:0.845:0.006	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	SGSH	HGNC	ENSG00000181523	tier1			25	0	0.00	45	16	26.23
CX3CL1	0	genome.wustl.edu	37	16	57416468	57416468	+	Missense_Mutation	SNP	G	G	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	16	57416468	57416468	G	T	SNP	CX3CL1	ENST00000006053	human	ensembl	74_37	+1	known	missense	c.718	p.A240S	0.000	NULL	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CX3CL1	-	no_errors	CX3CL1	HGNC	ENSG00000006210	tier1	-	-	50	0	0.00	32	4	11.11
PRKDC	0	genome.wustl.edu	37	8	48845610	48845610	+	Silent	SNP	T	T	G			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	8	48845610	48845610	T	G	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	silent	c.1746	p.T582	0.723	superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1	-	-	36	0	0.00	46	10	17.86
APCDD1	0	genome.wustl.edu	37	18	10471744	10471744	+	Missense_Mutation	SNP	T	T	G			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	18	10471744	10471744	T	G	SNP	APCDD1	ENST00000355285	human	ensembl	74_37	+1	known	missense	c.460	p.C154G	0.997	NULL	NULL	-	no_errors	APCDD1	HGNC	ENSG00000154856	tier1	-	-	43	0	0.00	35	8	18.60
SLC35A3	0	genome.wustl.edu	37	1	100483253	100483253	+	Missense_Mutation	SNP	G	G	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	1	100483253	100483253	G	T	SNP	SLC35A3	ENST00000370153	human	ensembl	74_37	+1	known	missense	c.895	p.V299L	1.000	pfam_Nuc_sug_transpt,pfam_UAA,pirsf_UDP/CMP-sugar_transptr,tigrfam_UDPgal_transpt	pfam_Nuc_sug_transpt,pfam_UAA,pfam_DMT,pfam_Tpt_PEP_trans_dom,pirsf_UDP/CMP-sugar_transptr,tigrfam_UDPgal_transpt	-	no_errors	SLC35A3	HGNC	ENSG00000117620	tier1	-	-	50	0	0.00	44	4	8.33
PTPRVP	0	genome.wustl.edu	37	1	202155418	202155418	+	RNA	SNP	G	G	C			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	1	202155418	202155418	G	C	SNP	PTPRVP	ENST00000482597	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.568	-	-	-	no_errors	PTPRVP	HGNC	ENSG00000243323	tier1	-	-	26	0	0.00	14	10	41.67
LINC00957	0	genome.wustl.edu	37	7	44081421	44081421	+	RNA	SNP	T	T	C			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	7	44081421	44081421	T	C	SNP	LINC00957	ENST00000441052	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.378	-	-	-	no_errors	LINC00957	HGNC	ENSG00000235314	tier1	-	-	82	0	0.00	85	8	8.60
OS9	0	genome.wustl.edu	37	12	58113952	58113952	+	Silent	SNP	G	G	C			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	12	58113952	58113952	G	C	SNP	OS9	ENST00000315970	human	ensembl	74_37	+1	known	silent	c.1671	p.L557	1.000	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom	-	no_errors	OS9	HGNC	ENSG00000135506	tier1	-	-	37	0	0.00	371	266	41.76
MAPK9	0	genome.wustl.edu	37	5	179674413	179674413	+	Silent	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	5	179674413	179674413	G	A	SNP	MAPK9	ENST00000425491	human	ensembl	74_37	-1	known	silent	c.714	p.P238	0.944	smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_JNK	-	no_errors	MAPK9	HGNC	ENSG00000050748	tier1	rs200094588	GMAF=0.0005	59	0	0.00	44	33	42.86
MAP2K3	0	genome.wustl.edu	37	17	21204268	21204268	+	Missense_Mutation	SNP	T	T	C			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	17	21204268	21204268	T	C	SNP	MAP2K3	ENST00000342679	human	ensembl	74_37	+1	known	missense	c.362	p.F121S	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP2K3	HGNC	ENSG00000034152	tier1	-	-	46	0	0.00	76	10	11.63
OS9	0	genome.wustl.edu	37	12	58111971	58111971	+	Missense_Mutation	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	12	58111971	58111971	G	A	SNP	OS9	ENST00000315970	human	ensembl	74_37	+1	known	missense	c.1177	p.A393T	0.000	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom	-	no_errors	OS9	HGNC	ENSG00000135506	tier1	-	-	13	0	0.00	154	92	37.40
KDM4B	0	genome.wustl.edu	37	19	5133999	5133999	+	Missense_Mutation	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	19	5133999	5133999	G	A	SNP	KDM4B	ENST00000159111	human	ensembl	74_37	+1	known	missense	c.2012	p.R671K	1.000	NULL	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4B	HGNC	ENSG00000127663	tier1	-	-	74	0	0.00	65	36	35.64
MAML2	0	genome.wustl.edu	37	11	95718699	95718699	+	Silent	SNP	A	A	G			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	11	95718699	95718699	A	G	SNP	MAML2	ENST00000524717	human	ensembl	74_37	-1	known	silent	c.2451	p.Y817	1.000	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML2	HGNC	ENSG00000184384	tier1	-	-	68	0	0.00	34	4	10.53
CEP170	0	genome.wustl.edu	37	1	243328110	243328110	+	Missense_Mutation	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	1	243328110	243328110	G	A	SNP	CEP170	ENST00000366542	human	ensembl	74_37	-1	known	missense	c.3152	p.P1051L	1.000	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,superfamily_Fibronectin_type3,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	CEP170	HGNC	ENSG00000143702	tier1	rs199844027	-	37	0	0.00	49	8	14.04
H6PD	0	genome.wustl.edu	37	1	9322246	9322246	+	Missense_Mutation	SNP	C	C	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	1	9322246	9322246	C	A	SNP	H6PD	ENST00000377403	human	ensembl	74_37	+1	known	missense	c.874	p.H292N	0.489	pfam_G6P_DH_C	pfam_G6P_DH_C,pfam_G6P_DH_NAD-bd,prints_G6P_DH,tigrfam_6-phosphogluconolactonase_DevB	-	no_errors	H6PD	HGNC	ENSG00000049239	tier1	-	-	41	0	0.00	30	14	31.82
H6PD	0	genome.wustl.edu	37	1	9322245	9322245	+	Silent	SNP	G	G	C			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	1	9322245	9322245	G	C	SNP	H6PD	ENST00000377403	human	ensembl	74_37	+1	known	silent	c.873	p.R291	0.429	pfam_G6P_DH_C	pfam_G6P_DH_C,pfam_G6P_DH_NAD-bd,prints_G6P_DH,tigrfam_6-phosphogluconolactonase_DevB	-	no_errors	H6PD	HGNC	ENSG00000049239	tier1	-	-	41	0	0.00	29	14	32.56
ACADVL	0	genome.wustl.edu	37	17	7123240	7123241	+	RNA	INS	-	-	GGGCGTGCCGGACGC			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	17	7123240	7123241	-	GGGCGTGCCGGACGC	INS	ACADVL	ENST00000577857	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ACADVL	HGNC	ENSG00000072778	tier1			NA	NA	NA	NA	NA	NA
RGPD3	0	genome.wustl.edu	37	2	107068731	107068731	+	Missense_Mutation	SNP	C	C	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	2	107068731	107068731	C	T	SNP	RGPD3	ENST00000304514	human	ensembl	74_37	-1	known	missense	c.712	p.A238T	0.999	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD3	HGNC	ENSG00000153165	tier1	rs200225138	-	23	0	0.00	35	8	18.60
HELT	0	genome.wustl.edu	37	4	185940855	185940855	+	Missense_Mutation	SNP	C	C	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	4	185940855	185940855	C	A	SNP	HELT	ENST00000338875	human	ensembl	74_37	+1	known	missense	c.342	p.D114E	0.003	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,pfam_Orange,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_Orange,pfscan_bHLH_dom	-	no_errors	HELT	HGNC	ENSG00000187821	tier1	-	-	14	0	0.00	11	16	59.26
CCDC135	0	genome.wustl.edu	37	16	57760001	57760001	+	Missense_Mutation	SNP	C	C	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	16	57760001	57760001	C	T	SNP	CCDC135	ENST00000360716	human	ensembl	74_37	+1	known	missense	c.1780	p.R594C	0.997	NULL	NULL	-	no_errors	CCDC135	HGNC	ENSG00000159625	tier1	-	-	44	0	0.00	13	15	53.57
TUB	0	genome.wustl.edu	37	11	8119343	8119343	+	Missense_Mutation	SNP	G	G	C			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	11	8119343	8119343	G	C	SNP	TUB	ENST00000305253	human	ensembl	74_37	+1	known	missense	c.1133	p.R378P	1.000	pfam_Tubby_C,superfamily_Tubby_C-like,prints_Tubby_C	pfam_Tubby_C,superfamily_Tubby_C-like,prints_Tubby_N,prints_Tubby_C	-	no_errors	TUB	HGNC	ENSG00000166402	tier1	-	-	43	0	0.00	28	18	39.13
PPP1R16A	0	genome.wustl.edu	37	8	145724311	145724311	+	Missense_Mutation	SNP	G	G	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	8	145724311	145724311	G	T	SNP	PPP1R16A	ENST00000292539	human	ensembl	74_37	+1	known	missense	c.343	p.D115Y	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PPP1R16A	HGNC	ENSG00000160972	tier1	-	-	44	0	0.00	15	3	16.67
HSP90AA1	0	genome.wustl.edu	37	14	102548534	102548534	+	Missense_Mutation	SNP	T	T	G			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	14	102548534	102548534	T	G	SNP	HSP90AA1	ENST00000334701	human	ensembl	74_37	-1	known	missense	c.2369	p.E790A	1.000	pirsf_Hsp90_fam,pfam_Hsp90_fam	pirsf_Hsp90_fam,pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,prints_Hsp90_N	-	no_errors	HSP90AA1	HGNC	ENSG00000080824	tier1	-	-	93	0	0.00	72	47	39.50
ARID2	0	genome.wustl.edu	37	12	46244344	46244344	+	Missense_Mutation	SNP	C	C	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	12	46244344	46244344	C	T	SNP	ARID2	ENST00000334344	human	ensembl	74_37	+1	known	missense	c.2438	p.S813F	1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,pfam_DNA-bd_RFX,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID2	HGNC	ENSG00000189079	tier1	-	-	39	0	0.00	46	14	23.33
HELZ2	0	genome.wustl.edu	37	20	62202972	62202972	+	RNA	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	20	62202972	62202972	G	A	SNP	HELZ2	ENST00000479540	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.490	-	-	-	no_errors	HELZ2	HGNC	ENSG00000130589	tier1	-	-	33	0	0.00	56	13	18.57
MTND1P15	0	genome.wustl.edu	37	17	22024142	22024142	+	RNA	SNP	C	C	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	17	22024142	22024142	C	T	SNP	MTND1P15	ENST00000579693	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.125	-	-	-	no_errors	MTND1P15	HGNC	ENSG00000264168	tier1	-	-	16	0	0.00	19	8	29.63
TAPT1	0	genome.wustl.edu	37	4	16165055	16165055	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	4	16165055	16165055	A	-	DEL	TAPT1	ENST00000405303	human	ensembl	74_37	-1	known	frame_shift_del	c.1580	p.L527fs	1.000	NULL	pfam_Membrane_Tatp1/CMV_rcpt	-	no_errors	TAPT1	HGNC	ENSG00000169762	tier1			42	0	0.00	66	7	9.59
OS9	0	genome.wustl.edu	37	12	58111997	58111997	+	Silent	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	12	58111997	58111997	G	A	SNP	OS9	ENST00000315970	human	ensembl	74_37	+1	known	silent	c.1203	p.E401	0.006	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom	-	no_errors	OS9	HGNC	ENSG00000135506	tier1	-	-	15	0	0.00	173	103	37.32
C16orf58	0	genome.wustl.edu	37	16	31512021	31512021	+	Nonsense_Mutation	SNP	A	A	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	16	31512021	31512021	A	T	SNP	C16orf58	ENST00000565128	human	ensembl	74_37	-1	known	nonsense	c.332	p.L111*	1.000	NULL	pfam_RUS2/WXR1	-	no_errors	C16orf58	HGNC	ENSG00000140688	tier1	-	-	25	0	0.00	10	16	61.54
KIAA1211	0	genome.wustl.edu	37	4	57180576	57180577	+	In_Frame_Ins	INS	-	-	GGAGCGGAGGGAGCGGAG			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	4	57180576	57180577	-	GGAGCGGAGGGAGCGGAG	INS	KIAA1211	ENST00000504228	human	ensembl	74_37	+1	known	in_frame_ins	c.908_909	p.307in_frame_insERRERR	0.000:0.000	NULL	NULL	-	no_errors	KIAA1211	HGNC	ENSG00000109265	tier1			NA	NA	NA	NA	NA	NA
FMN1	0	genome.wustl.edu	37	15	33359026	33359026	+	Missense_Mutation	SNP	G	G	C			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	15	33359026	33359026	G	C	SNP	FMN1	ENST00000334528	human	ensembl	74_37	-1	known	missense	c.1060	p.P354A	0.997	NULL	pfam_FH2_Formin,smart_FH2_Formin,prints_Formin_Cappuccino_subfam	-	no_errors	FMN1	HGNC	ENSG00000248905	tier1	-	-	64	0	0.00	44	14	24.14
SAMHD1	0	genome.wustl.edu	37	20	35545145	35545145	+	Missense_Mutation	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	20	35545145	35545145	G	A	SNP	SAMHD1	ENST00000262878	human	ensembl	74_37	-1	known	missense	c.1042	p.R348C	0.998	NULL	pfam_HD_domain,pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,smart_HD/PDEase_dom,pfscan_SAM	-	no_errors	SAMHD1	HGNC	ENSG00000101347	tier1	-	-	37	0	0.00	48	10	17.24
MMD2	0	genome.wustl.edu	37	7	4959908	4959908	+	Missense_Mutation	SNP	C	C	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	7	4959908	4959908	C	T	SNP	MMD2	ENST00000404774	human	ensembl	74_37	-1	known	missense	c.184	p.D62N	0.991	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	MMD2	HGNC	ENSG00000136297	tier1	-	-	53	0	0.00	60	10	14.08
HIST2H2BE	0	genome.wustl.edu	37	1	149857909	149857909	+	Missense_Mutation	SNP	C	C	G			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	1	149857909	149857909	C	G	SNP	HIST2H2BE	ENST00000369155	human	ensembl	74_37	-1	known	missense	c.282	p.E94D	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST2H2BE	HGNC	ENSG00000184678	tier1	-	-	88	0	0.00	68	10	12.82
LSM14A	0	genome.wustl.edu	37	19	34685495	34685495	+	Missense_Mutation	SNP	T	T	G			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	19	34685495	34685495	T	G	SNP	LSM14A	ENST00000433627	human	ensembl	74_37	+1	known	missense	c.234	p.C78W	1.000	superfamily_LSM_dom	pfam_FDF_dom,superfamily_LSM_dom	-	no_errors	LSM14A	HGNC	ENSG00000257103	tier1	-	-	65	0	0.00	68	22	24.44
CCNYL2	0	genome.wustl.edu	37	10	42924561	42924594	+	Splice_Site	DEL	CACCTTTGCTTGATATGATAATATAGTGCCAAGG	CACCTTTGCTTGATATGATAATATAGTGCCAAGG	-			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	CACCTTTGCTTGATATGATAATATAGTGCCAAGG	CACCTTTGCTTGATATGATAATATAGTGCCAAGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	10	42924561	42924594	CACCTTTGCTTGATATGATAATATAGTGCCAAGG	-	DEL	CCNYL2	ENST00000483242	human	ensembl	74_37	-1	known	splice_site_del	c.NULL	NULL	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.997:0.995:1.000:1.000:0.999:1.000:0.996:0.996:0.999	-	-	-	no_errors	CCNYL2	HGNC	ENSG00000182632	tier1			NA	NA	NA	NA	NA	NA
TTN	0	genome.wustl.edu	37	2	179408710	179408710	+	Missense_Mutation	SNP	T	T	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	2	179408710	179408710	T	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.88457	p.D29486V	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	58	0	0.00	28	37	56.06
SARS	0	genome.wustl.edu	37	1	109778719	109778719	+	Missense_Mutation	SNP	A	A	G			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	1	109778719	109778719	A	G	SNP	SARS	ENST00000369923	human	ensembl	74_37	+1	known	missense	c.1090	p.I364V	1.000	pfam_aa-tRNA-synt_IIb_cons-dom,pirsf_Ser-tRNA-ligase_type_1,pfscan_aa-tRNA-synth_II,prints_Ser-tRNA-ligase_type_1,tigrfam_Ser-tRNA-ligase_type_1	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Ser-tRNA-synth_1_N,superfamily_tRNA-bd_arm,pirsf_Ser-tRNA-ligase_type_1,pfscan_aa-tRNA-synth_II,prints_Ser-tRNA-ligase_type_1,tigrfam_Ser-tRNA-ligase_type_1	-	no_errors	SARS	HGNC	ENSG00000031698	tier1	-	-	59	0	0.00	42	14	25.00
XYLB	0	genome.wustl.edu	37	3	38411731	38411732	+	RNA	INS	-	-	CACACACACACA			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	3	38411731	38411732	-	CACACACACACA	INS	XYLB	ENST00000487569	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	XYLB	HGNC	ENSG00000093217	tier1			NA	NA	NA	NA	NA	NA
KAZN	0	genome.wustl.edu	37	1	15420846	15420846	+	Missense_Mutation	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	1	15420846	15420846	G	A	SNP	KAZN	ENST00000376030	human	ensembl	74_37	+1	known	missense	c.1393	p.V465I	1.000	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	KAZN	HGNC	ENSG00000189337	tier1	rs200509529	-	61	0	0.00	101	29	22.31
RABGGTB	0	genome.wustl.edu	37	1	76259678	76259714	+	RNA	DEL	CCTAAGAGTGAGACTTAACCCACTTTTAAATTGTTCT	CCTAAGAGTGAGACTTAACCCACTTTTAAATTGTTCT	-			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	CCTAAGAGTGAGACTTAACCCACTTTTAAATTGTTCT	CCTAAGAGTGAGACTTAACCCACTTTTAAATTGTTCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	1	76259678	76259714	CCTAAGAGTGAGACTTAACCCACTTTTAAATTGTTCT	-	DEL	RABGGTB	ENST00000459697	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.001:0.001:0.000:0.002:0.005:0.008:0.009:0.007:0.005:0.003:0.003:0.001:0.001:0.002:0.001:0.001:0.001:0.000:0.000:0.000:0.001:0.001:0.000:0.000:0.000:0.000:0.000:0.001:0.000:0.000:0.000:0.000:0.000:0.001:0.000:0.000	-	-	-	no_errors	RABGGTB	HGNC	ENSG00000137955	tier1			NA	NA	NA	NA	NA	NA
GAS2	0	genome.wustl.edu	37	11	22770671	22770671	+	Missense_Mutation	SNP	G	G	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	11	22770671	22770671	G	T	SNP	GAS2	ENST00000278187	human	ensembl	74_37	+1	known	missense	c.479	p.G160V	1.000	superfamily_CH-domain	pfam_GAS2_dom,pfam_CH-domain,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_GAS2_dom,pfscan_CH-domain	-	no_errors	GAS2	HGNC	ENSG00000148935	tier1	-	-	47	0	0.00	34	12	26.09
CSMD3	0	genome.wustl.edu	37	8	113668387	113668387	+	Silent	SNP	A	A	G			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	8	113668387	113668387	A	G	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	silent	c.3000	p.Y1000	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	30	0	0.00	13	11	45.83
CPA6	0	genome.wustl.edu	37	8	68423882	68423882	+	Missense_Mutation	SNP	A	A	G			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	8	68423882	68423882	A	G	SNP	CPA6	ENST00000297770	human	ensembl	74_37	-1	known	missense	c.326	p.I109T	1.000	pfam_Prot_inh_M14A,superfamily_Prot_inh_propept	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA6	HGNC	ENSG00000165078	tier1	rs151119622	GMAF=0.0005	21	0	0.00	11	15	57.69
LOC100505679	0	genome.wustl.edu	37	15	84850838	84850838	+	Silent	SNP	G	G	A			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	15	84850838	84850838	G	A	SNP	LOC100505679	ENST00000558195	human	ensembl	74_37	+1	putative	silent	c.339	p.V113	0.990	NULL	NULL	-	no_errors	RP11-182J1.16	Clone_based_vega_gene	ENSG00000259511	tier1	-	-	36	0	0.00	12	3	20.00
CAPS2	0	genome.wustl.edu	37	12	75687052	75687052	+	Missense_Mutation	SNP	A	A	T			TCGA-HB-A3YV-01A-11D-A24N-09	TCGA-HB-A3YV-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0539c9cf-9cba-4257-b3e7-365a4b71c8fd	ea3ed74e-abbc-4b2b-915f-e90ad2399915	12	75687052	75687052	A	T	SNP	CAPS2	ENST00000409445	human	ensembl	74_37	-1	known	missense	c.1197	p.D399E	0.998	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CAPS2	HGNC	ENSG00000180881	tier1	-	-	51	0	0.00	41	15	26.32
