Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
CRMP1	0	genome.wustl.edu	37	4	5827504	5827505	+	RNA	DEL	CA	CA	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	5827504	5827505	CA	-	DEL	CRMP1	ENST00000513911	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	CRMP1	HGNC	ENSG00000072832	tier1			17	0	0.00	16	2	11.11
SSX5	0	genome.wustl.edu	37	X	48049574	48049574	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	48049574	48049574	G	A	SNP	SSX5	ENST00000311798	human	ensembl	74_37	-1	known	missense	c.584	p.T195I	0.000	NULL	pfam_SSXRD_motif,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	SSX5	HGNC	ENSG00000165583	tier1	-	-	130	0	0.00	66	29	30.53
FCGBP	0	genome.wustl.edu	37	19	40433404	40433404	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	40433404	40433404	G	A	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	missense	c.865	p.L289F	0.885	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920	tier1	-	-	21	0	0.00	8	19	70.37
ENSG00000260616	0	genome.wustl.edu	37	16	50818068	50818068	+	RNA	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	50818068	50818068	G	T	SNP	ENSG00000260616	ENST00000564510	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-327F22.4	Clone_based_vega_gene	ENSG00000260616	tier1	-	-	15	0	0.00	11	4	26.67
ENSG00000267075	0	genome.wustl.edu	37	17	20451616	20451616	+	RNA	SNP	T	T	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	20451616	20451616	T	G	SNP	ENSG00000267075	ENST00000591705	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.964	-	-	-	no_errors	RP11-434D2.3	Clone_based_vega_gene	ENSG00000267075	tier1	-	-	33	0	0.00	25	25	50.00
PLEKHA6	0	genome.wustl.edu	37	1	204226796	204226796	+	Silent	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	204226796	204226796	G	A	SNP	PLEKHA6	ENST00000272203	human	ensembl	74_37	-1	known	silent	c.1209	p.A403	0.998	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA6	HGNC	ENSG00000143850	tier1	-	-	53	0	0.00	85	8	8.60
ZNF536	0	genome.wustl.edu	37	19	31039575	31039575	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	31039575	31039575	G	A	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	missense	c.3049	p.A1017T	1.000	smart_Znf_C2H2-like	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597	tier1	-	-	54	0	0.00	35	8	18.60
CHRNA9	0	genome.wustl.edu	37	4	40337890	40337890	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	40337890	40337890	C	A	SNP	CHRNA9	ENST00000310169	human	ensembl	74_37	+1	known	missense	c.111	p.D37E	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA9	HGNC	ENSG00000174343	tier1	-	-	52	0	0.00	39	35	47.30
ZNF341	0	genome.wustl.edu	37	20	32349814	32349814	+	Missense_Mutation	SNP	A	A	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	20	32349814	32349814	A	C	SNP	ZNF341	ENST00000375200	human	ensembl	74_37	+1	known	missense	c.1175	p.Q392P	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF341	HGNC	ENSG00000131061	tier1	-	-	43	0	0.00	34	33	49.25
GRASP	0	genome.wustl.edu	37	12	52407943	52407943	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	52407943	52407943	G	T	SNP	GRASP	ENST00000293662	human	ensembl	74_37	+1	known	nonsense	c.640	p.E214*	0.999	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	GRASP	HGNC	ENSG00000161835	tier1	-	-	56	0	0.00	41	32	43.84
MYH7	0	genome.wustl.edu	37	14	23887561	23887561	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	23887561	23887561	G	T	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	missense	c.4027	p.L1343M	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054	tier1	-	-	35	0	0.00	32	15	31.91
ELFN2	0	genome.wustl.edu	37	22	37769803	37769803	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	22	37769803	37769803	G	T	SNP	ELFN2	ENST00000402918	human	ensembl	74_37	-1	known	missense	c.1772	p.T591N	0.009	NULL	superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,pfscan_LPXTG_anchor	-	no_errors	ELFN2	HGNC	ENSG00000166897	tier1	-	-	49	0	0.00	20	53	72.60
MBL1P	0	genome.wustl.edu	37	10	81682653	81682653	+	RNA	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	81682653	81682653	G	A	SNP	MBL1P	ENST00000480805	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.036	-	-	-	no_errors	MBL1P	HGNC	ENSG00000242600	tier1	-	-	71	0	0.00	38	13	25.00
VWDE	0	genome.wustl.edu	37	7	12410389	12410389	+	Silent	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	12410389	12410389	T	A	SNP	VWDE	ENST00000452576	human	ensembl	74_37	-1	known	silent	c.1689	p.G563	1.000	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,superfamily_Cadherin-like,smart_VWF_type-D,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	VWDE	HGNC	ENSG00000146530	tier1	-	-	46	0	0.00	29	15	34.09
PELI1	0	genome.wustl.edu	37	2	64327618	64327618	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	64327618	64327618	C	A	SNP	PELI1	ENST00000358912	human	ensembl	74_37	-1	known	missense	c.217	p.D73Y	1.000	pfam_Pellino_fam	pfam_Pellino_fam	-	no_errors	PELI1	HGNC	ENSG00000197329	tier1	-	-	52	0	0.00	35	15	30.00
CYLC1	0	genome.wustl.edu	37	X	83128992	83128992	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	83128992	83128992	A	-	DEL	CYLC1	ENST00000329312	human	ensembl	74_37	+1	known	frame_shift_del	c.1276	p.D428fs	0.038	NULL	NULL	-	no_errors	CYLC1	HGNC	ENSG00000183035	tier1			35	0	0.00	24	15	38.46
CEACAM18	0	genome.wustl.edu	37	19	51981880	51981880	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	51981880	51981880	A	T	SNP	CEACAM18	ENST00000451626	human	ensembl	74_37	+1	known	missense	c.167	p.E56V	0.001	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CEACAM18	HGNC	ENSG00000213822	tier1	-	-	66	0	0.00	14	35	71.43
WISP1	0	genome.wustl.edu	37	8	134233026	134233026	+	Silent	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	134233026	134233026	A	G	SNP	WISP1	ENST00000250160	human	ensembl	74_37	+1	known	silent	c.552	p.V184	1.000	pfam_VWF_C,smart_VWF_C,pirsf_IGFBP_CNN,pfscan_VWF_C	pfam_IGFBP-like,pfam_VWF_C,pfam_Cys_knot,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_IGFBP-like,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_Cys_knot_C,pirsf_IGFBP_CNN,pfscan_Cys_knot_C,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	WISP1	HGNC	ENSG00000104415	tier1	-	-	42	0	0.00	19	50	72.46
OR2T27	0	genome.wustl.edu	37	1	248813477	248813477	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	248813477	248813477	C	A	SNP	OR2T27	ENST00000344889	human	ensembl	74_37	-1	known	missense	c.709	p.A237S	0.998	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T27	HGNC	ENSG00000187701	tier1	-	-	68	0	0.00	89	12	11.88
ENSG00000262198	0	genome.wustl.edu	37	13	23492806	23492806	+	RNA	DEL	A	A	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	23492806	23492806	A	-	DEL	ENSG00000262198	ENST00000575845	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.044	-	-	-	no_errors	RP11-124N19.3	Clone_based_vega_gene	ENSG00000262198	tier1			20	0	0.00	14	6	30.00
TPTE	0	genome.wustl.edu	37	21	10973770	10973770	+	RNA	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	21	10973770	10973770	G	T	SNP	TPTE	ENST00000415664	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TPTE	HGNC	ENSG00000166157	tier1	-	-	93	0	0.00	91	39	30.00
ACAN	0	genome.wustl.edu	37	15	89392899	89392899	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	89392899	89392899	C	A	SNP	ACAN	ENST00000439576	human	ensembl	74_37	+1	known	missense	c.1963	p.L655I	1.000	pfam_Link,superfamily_C-type_lectin_fold,smart_Link,pfscan_Link	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,smart_EG-like_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	ACAN	HGNC	ENSG00000157766	tier1	-	-	47	0	0.00	23	27	54.00
HSPA2	0	genome.wustl.edu	37	14	65007482	65007482	+	RNA	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	65007482	65007482	G	T	SNP	HSPA2	ENST00000554883	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.021	-	-	-	no_errors	HSPA2	HGNC	ENSG00000126803	tier1	-	-	33	0	0.00	14	11	44.00
ANKRD34C	0	genome.wustl.edu	37	15	79586115	79586115	+	Silent	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	79586115	79586115	C	A	SNP	ANKRD34C	ENST00000421388	human	ensembl	74_37	+1	known	silent	c.489	p.T163	0.800	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD34C	HGNC	ENSG00000235711	tier1	-	-	33	0	0.00	30	20	40.00
SMAD5	0	genome.wustl.edu	37	5	135513742	135513742	+	RNA	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	135513742	135513742	A	T	SNP	SMAD5	ENST00000514641	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.219	-	-	-	no_errors	SMAD5	HGNC	ENSG00000113658	tier1	-	-	30	0	0.00	11	11	50.00
OR9Q2	0	genome.wustl.edu	37	11	57958595	57958595	+	Silent	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	57958595	57958595	C	A	SNP	OR9Q2	ENST00000311591	human	ensembl	74_37	+1	known	silent	c.633	p.I211	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR9Q2	HGNC	ENSG00000186513	tier1	-	-	40	0	0.00	30	12	28.57
FBXO5	0	genome.wustl.edu	37	6	153296241	153296241	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	153296241	153296241	T	C	SNP	FBXO5	ENST00000229758	human	ensembl	74_37	-1	known	missense	c.619	p.K207E	1.000	NULL	pfam_F-box_dom,superfamily_F-box_dom	-	no_errors	FBXO5	HGNC	ENSG00000112029	tier1	-	-	69	0	0.00	26	34	56.67
CLDN11	0	genome.wustl.edu	37	3	170136948	170136948	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	170136948	170136948	G	A	SNP	CLDN11	ENST00000064724	human	ensembl	74_37	+1	known	missense	c.94	p.V32M	1.000	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin11,prints_Claudin	-	no_errors	CLDN11	HGNC	ENSG00000013297	tier1	-	-	47	0	0.00	33	15	31.25
EXOC2	0	genome.wustl.edu	37	6	572638	572638	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	572638	572638	C	A	SNP	EXOC2	ENST00000230449	human	ensembl	74_37	-1	known	missense	c.1325	p.R442I	1.000	NULL	pfam_IPT,superfamily_Ig_E-set,superfamily_Cullin_repeat-like_dom	-	no_errors	EXOC2	HGNC	ENSG00000112685	tier1	-	-	30	0	0.00	20	22	52.38
GFRA1	0	genome.wustl.edu	37	10	117853224	117853224	+	Missense_Mutation	SNP	T	T	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	117853224	117853224	T	G	SNP	GFRA1	ENST00000355422	human	ensembl	74_37	-1	known	missense	c.1004	p.N335T	0.998	pfam_GDNF/GAS1,smart_GDNF/GAS1,pirsf_Glial_neurotroph_fac_rcpt_a1/2	pfam_GDNF/GAS1,smart_GDNF/GAS1,pirsf_Glial_neurotroph_fac_rcpt_a1/2,prints_GDNF_rcpt,prints_GDNF_rcpt_A1	-	no_errors	GFRA1	HGNC	ENSG00000151892	tier1	-	-	33	0	0.00	23	11	32.35
MRPL50	0	genome.wustl.edu	37	9	104152819	104152819	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	104152819	104152819	C	-	DEL	MRPL50	ENST00000374865	human	ensembl	74_37	-1	known	frame_shift_del	c.406	p.D136fs	0.969	pfam_Ribosomal_L50_mt	pfam_Ribosomal_L50_mt	-	no_errors	MRPL50	HGNC	ENSG00000136897	tier1			44	0	0.00	32	11	25.58
ZCCHC5	0	genome.wustl.edu	37	X	77912957	77912957	+	Missense_Mutation	SNP	T	T	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	77912957	77912957	T	G	SNP	ZCCHC5	ENST00000321110	human	ensembl	74_37	-1	known	missense	c.961	p.N321H	0.147	NULL	pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC5	HGNC	ENSG00000179300	tier1	-	-	52	0	0.00	28	31	52.54
ARHGEF10	0	genome.wustl.edu	37	8	1871734	1871734	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	1871734	1871734	A	T	SNP	ARHGEF10	ENST00000398564	human	ensembl	74_37	+1	known	missense	c.2435	p.Q812L	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF10	HGNC	ENSG00000104728	tier1	-	-	21	0	0.00	5	10	66.67
FGF5	0	genome.wustl.edu	37	4	81210013	81210013	+	RNA	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	81210013	81210013	C	T	SNP	FGF5	ENST00000503413	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FGF5	HGNC	ENSG00000138675	tier1	-	-	69	0	0.00	36	13	26.53
RTN4IP1	0	genome.wustl.edu	37	6	107067198	107067198	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	107067198	107067198	A	G	SNP	RTN4IP1	ENST00000369063	human	ensembl	74_37	-1	known	missense	c.499	p.S167P	0.997	superfamily_GroES-like,smart_PKS_ER	pfam_ADH_C,pfam_ADH_GroES-like,superfamily_GroES-like,smart_PKS_ER	-	no_errors	RTN4IP1	HGNC	ENSG00000130347	tier1	-	-	51	0	0.00	52	19	26.76
ANKRD26P1	0	genome.wustl.edu	37	16	46602804	46602804	+	RNA	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	46602804	46602804	C	A	SNP	ANKRD26P1	ENST00000566201	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ANKRD26P1	HGNC	ENSG00000261239	tier1	-	-	39	0	0.00	27	13	32.50
IPO7	0	genome.wustl.edu	37	11	9424858	9424858	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	9424858	9424858	G	T	SNP	IPO7	ENST00000379719	human	ensembl	74_37	+1	known	missense	c.106	p.V36F	1.000	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	pfam_Importin-beta_N,pfam_Cse1,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO7	HGNC	ENSG00000205339	tier1	-	-	56	0	0.00	35	12	25.53
GLA	0	genome.wustl.edu	37	X	100652850	100652850	+	Missense_Mutation	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	100652850	100652850	C	G	SNP	GLA	ENST00000218516	human	ensembl	74_37	-1	known	missense	c.1237	p.V413L	0.990	NULL	pfam_Glyco_hydro_GHD,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_27	-	no_errors	GLA	HGNC	ENSG00000102393	tier1	-	-	67	0	0.00	68	12	15.00
EPHX4	0	genome.wustl.edu	37	1	92498145	92498145	+	Missense_Mutation	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	92498145	92498145	C	G	SNP	EPHX4	ENST00000370383	human	ensembl	74_37	+1	known	missense	c.315	p.F105L	1.000	prints_Epox_hydrolase-like	pfam_AB_hydrolase_1,prints_Epox_hydrolase-like,prints_AB_hydrolase_1	-	no_errors	EPHX4	HGNC	ENSG00000172031	tier1	-	-	61	0	0.00	35	43	55.13
SYTL5	0	genome.wustl.edu	37	X	37965912	37965912	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	37965912	37965912	G	T	SNP	SYTL5	ENST00000456733	human	ensembl	74_37	+1	known	missense	c.1288	p.G430C	1.000	superfamily_C2_dom	pfam_C2_dom,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ	-	no_errors	SYTL5	HGNC	ENSG00000147041	tier1	-	-	39	0	0.00	10	25	71.43
NCR1	0	genome.wustl.edu	37	19	55420866	55420866	+	Silent	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	55420866	55420866	G	A	SNP	NCR1	ENST00000291890	human	ensembl	74_37	+1	known	silent	c.618	p.V206	0.035	smart_Ig_sub	smart_Ig_sub	-	no_errors	NCR1	HGNC	ENSG00000189430	tier1	-	-	36	0	0.00	22	17	42.50
NOVA1	0	genome.wustl.edu	37	14	26918120	26918120	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	26918120	26918120	C	A	SNP	NOVA1	ENST00000539517	human	ensembl	74_37	-1	known	missense	c.569	p.G190V	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	NOVA1	HGNC	ENSG00000139910	tier1	-	-	22	0	0.00	9	4	30.77
ZBTB42	0	genome.wustl.edu	37	14	105268390	105268390	+	Missense_Mutation	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	105268390	105268390	G	C	SNP	ZBTB42	ENST00000342537	human	ensembl	74_37	+1	known	missense	c.856	p.E286Q	0.924	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB42	HGNC	ENSG00000179627	tier1	-	-	48	0	0.00	51	28	35.44
TRAPPC12	0	genome.wustl.edu	37	2	3461464	3461464	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	3461464	3461464	G	T	SNP	TRAPPC12	ENST00000324266	human	ensembl	74_37	+1	known	missense	c.1603	p.A535S	1.000	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TRAPPC12	HGNC	ENSG00000171853	tier1	-	-	28	0	0.00	17	15	46.88
KIF13B	0	genome.wustl.edu	37	8	29039443	29039443	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	29039443	29039443	C	T	SNP	KIF13B	ENST00000524189	human	ensembl	74_37	-1	known	missense	c.578	p.S193N	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_CAP-Gly_domain,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_CAP-Gly_domain,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_CAP-Gly_domain,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13B	HGNC	ENSG00000197892	tier1	-	-	40	0	0.00	18	9	33.33
OR4C15	0	genome.wustl.edu	37	11	55322099	55322099	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	55322099	55322099	C	T	SNP	OR4C15	ENST00000314644	human	ensembl	74_37	+1	known	missense	c.317	p.A106V	0.094	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C15	HGNC	ENSG00000181939	tier1	-	-	82	0	0.00	87	39	30.47
PTCH1	0	genome.wustl.edu	37	9	98239124	98239124	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	98239124	98239124	C	A	SNP	PTCH1	ENST00000331920	human	ensembl	74_37	-1	known	missense	c.1519	p.A507S	1.000	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	-	no_errors	PTCH1	HGNC	ENSG00000185920	tier1	-	-	46	0	0.00	31	15	32.61
HSPH1	0	genome.wustl.edu	37	13	31718054	31718054	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	31718054	31718054	C	T	SNP	HSPH1	ENST00000445273	human	ensembl	74_37	-1	known	missense	c.1597	p.V533I	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPH1	HGNC	ENSG00000120694	tier1	-	-	49	0	0.00	42	15	26.32
ZC4H2	0	genome.wustl.edu	37	X	64139772	64139772	+	RNA	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	64139772	64139772	G	T	SNP	ZC4H2	ENST00000488608	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZC4H2	HGNC	ENSG00000126970	tier1	-	-	10	0	0.00	5	4	44.44
AMER2	0	genome.wustl.edu	37	13	25744024	25744024	+	Silent	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	25744024	25744024	C	G	SNP	AMER2	ENST00000515384	human	ensembl	74_37	-1	known	silent	c.1734	p.T578	0.000	pfam_Uncharacterised_FAM123	pfam_Uncharacterised_FAM123	-	no_errors	AMER2	HGNC	ENSG00000165566	tier1	-	-	60	0	0.00	30	27	47.37
USP54	0	genome.wustl.edu	37	10	75302580	75302580	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	75302580	75302580	T	C	SNP	USP54	ENST00000339859	human	ensembl	74_37	-1	known	missense	c.553	p.I185V	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP54	HGNC	ENSG00000166348	tier1	-	-	30	0	0.00	10	6	37.50
MEF2C	0	genome.wustl.edu	37	5	88057009	88057009	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	88057009	88057009	C	A	SNP	MEF2C	ENST00000437473	human	ensembl	74_37	-1	known	missense	c.395	p.R132I	1.000	pfam_HJURP_C	pfam_TF_MADSbox,pfam_HJURP_C,superfamily_TF_MADSbox,smart_TF_MADSbox,prints_TF_MADSbox,pfscan_TF_MADSbox	-	no_errors	MEF2C	HGNC	ENSG00000081189	tier1	-	-	56	0	0.00	30	11	26.83
RALGAPA1	0	genome.wustl.edu	37	14	36142230	36142230	+	Splice_Site	SNP	T	T	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	36142230	36142230	T	G	SNP	RALGAPA1	ENST00000258840	human	ensembl	74_37	-1	known	splice_site	c.3541-2	e25-2	1.000	-	-	-	no_errors	RALGAPA1	HGNC	ENSG00000174373	tier1	-	-	27	0	0.00	18	14	43.75
CYP4F12	0	genome.wustl.edu	37	19	15784342	15784342	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	15784342	15784342	G	A	SNP	CYP4F12	ENST00000324632	human	ensembl	74_37	+1	known	missense	c.3	p.M1I	0.732	NULL	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F12	HGNC	ENSG00000186204	tier1	-	-	77	0	0.00	71	10	12.35
ENTPD1-AS1	0	genome.wustl.edu	37	10	97515949	97515949	+	RNA	DEL	G	G	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	97515949	97515949	G	-	DEL	ENTPD1-AS1	ENST00000416301	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.906	-	-	-	no_errors	ENTPD1-AS1	HGNC	ENSG00000226688	tier1			33	0	0.00	19	3	13.64
SIN3B	0	genome.wustl.edu	37	19	16952775	16952775	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	16952775	16952775	A	T	SNP	SIN3B	ENST00000379803	human	ensembl	74_37	+1	known	missense	c.578	p.Y193F	1.000	pfam_PAH,superfamily_PAH	pfam_PAH,pfam_HDAC_interact,superfamily_PAH,smart_HDAC_interact	-	no_errors	SIN3B	HGNC	ENSG00000127511	tier1	-	-	13	0	0.00	12	11	45.83
SEPT4	0	genome.wustl.edu	37	17	56603604	56603604	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	56603604	56603604	A	T	SNP	SEPT4	ENST00000457347	human	ensembl	74_37	-1	known	missense	c.473	p.F158Y	1.000	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase	-	no_errors	SEPT4	HGNC	ENSG00000108387	tier1	-	-	63	0	0.00	53	27	33.75
IL31RA	0	genome.wustl.edu	37	5	55212476	55212476	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	55212476	55212476	A	T	SNP	IL31RA	ENST00000447346	human	ensembl	74_37	+1	known	missense	c.1823	p.K608M	0.469	NULL	pfam_Fibronectin_type3,pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL31RA	HGNC	ENSG00000164509	tier1	-	-	41	0	0.00	38	10	20.83
SERPINB4	0	genome.wustl.edu	37	18	61310402	61310402	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	61310402	61310402	G	T	SNP	SERPINB4	ENST00000341074	human	ensembl	74_37	-1	known	missense	c.215	p.T72K	0.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB4	HGNC	ENSG00000206073	tier1	-	-	70	0	0.00	51	13	20.31
ARID2	0	genome.wustl.edu	37	12	46211484	46211484	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	46211484	46211484	G	T	SNP	ARID2	ENST00000334344	human	ensembl	74_37	+1	known	missense	c.450	p.M150I	1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,pfam_DNA-bd_RFX,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID2	HGNC	ENSG00000189079	tier1	-	-	33	0	0.00	15	18	54.55
ASPG	0	genome.wustl.edu	37	14	104577871	104577871	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	104577871	104577871	A	T	SNP	ASPG	ENST00000455920	human	ensembl	74_37	+1	known	missense	c.1553	p.Q518L	0.062	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Asparaginase/glutaminase,pfam_Ankyrin_rpt,superfamily_Asparaginase/glutaminase,superfamily_Ankyrin_rpt-contain_dom,smart_Asparaginase/glutaminase,smart_Ankyrin_rpt,prints_Asparaginase/glutaminase,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_AsnASEI	-	no_errors	ASPG	HGNC	ENSG00000166183	tier1	-	-	32	0	0.00	27	32	54.24
HSP90AA1	0	genome.wustl.edu	37	14	102548147	102548147	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	102548147	102548147	C	T	SNP	HSP90AA1	ENST00000334701	human	ensembl	74_37	-1	known	missense	c.2467	p.D823N	1.000	pirsf_Hsp90_fam,pfam_Hsp90_fam	pirsf_Hsp90_fam,pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,prints_Hsp90_N	-	no_errors	HSP90AA1	HGNC	ENSG00000080824	tier1	-	-	63	0	0.00	54	28	34.15
PLCG2	0	genome.wustl.edu	37	16	81972433	81972433	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	81972433	81972433	C	T	SNP	PLCG2	ENST00000359376	human	ensembl	74_37	+1	known	missense	c.3226	p.L1076F	0.288	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pirsf_PLC-gamma,pfscan_C2_dom	pfam_PLipase_C_PInositol-sp_X_dom,pfam_SH2,pfam_PLipase_C_Pinositol-sp_Y,pfam_SH3_domain,pfam_C2_dom,pfam_PLipase_C_EF-hand-like,pfam_SH3_2,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_SH2,smart_SH3_domain,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pirsf_PLC-gamma,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C,prints_SH2,prints_SH3_domain	-	no_errors	PLCG2	HGNC	ENSG00000197943	tier1	-	-	77	0	0.00	40	22	35.48
LOC100131825	0	genome.wustl.edu	37	1	159167000	159167000	+	RNA	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	159167000	159167000	A	T	SNP	LOC100131825	ENST00000415675	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTA-134P22.2	Clone_based_vega_gene	ENSG00000225670	tier1	-	-	13	0	0.00	19	11	36.67
NCOA5	0	genome.wustl.edu	37	20	44698881	44698881	+	Missense_Mutation	SNP	T	T	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	20	44698881	44698881	T	G	SNP	NCOA5	ENST00000290231	human	ensembl	74_37	-1	known	missense	c.333	p.R111S	1.000	NULL	superfamily_Anticodon-bd	-	no_errors	NCOA5	HGNC	ENSG00000124160	tier1	-	-	55	0	0.00	28	16	35.56
ENSG00000231817	0	genome.wustl.edu	37	13	47033285	47033285	+	RNA	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	47033285	47033285	A	T	SNP	ENSG00000231817	ENST00000595532	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.071	-	-	-	no_errors	RP11-189B4.6	Clone_based_vega_gene	ENSG00000231817	tier1	-	-	57	0	0.00	5	35	87.50
ENSG00000270726	0	genome.wustl.edu	37	X	155252107	155252107	+	RNA	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	155252107	155252107	C	G	SNP	ENSG00000270726	ENST00000285718	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AJ271736.10	Clone_based_vega_gene	ENSG00000270726	tier1	-	-	46	0	0.00	38	6	13.64
SOGA2	0	genome.wustl.edu	37	18	8783824	8783824	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	8783824	8783824	G	T	SNP	SOGA2	ENST00000359865	human	ensembl	74_37	+1	known	missense	c.714	p.E238D	1.000	NULL	pfam_SOGA	-	no_errors	SOGA2	HGNC	ENSG00000168502	tier1	-	-	73	0	0.00	54	29	34.94
MYH13	0	genome.wustl.edu	37	17	10243523	10243523	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	10243523	10243523	C	A	SNP	MYH13	ENST00000252172	human	ensembl	74_37	-1	known	missense	c.2000	p.R667M	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH13	HGNC	ENSG00000006788	tier1	-	-	36	0	0.00	61	9	12.86
GNAS	0	genome.wustl.edu	37	20	57415369	57415369	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	20	57415369	57415369	C	A	SNP	GNAS	ENST00000313949	human	ensembl	74_37	+1	known	missense	c.208	p.R70S	1.000	pfam_NESP55	pfam_NESP55	-	no_errors	GNAS	HGNC	ENSG00000087460	tier1	-	-	75	0	0.00	27	40	59.70
ZNF675	0	genome.wustl.edu	37	19	23836558	23836558	+	Missense_Mutation	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	23836558	23836558	C	G	SNP	ZNF675	ENST00000359788	human	ensembl	74_37	-1	known	missense	c.1177	p.E393Q	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF675	HGNC	ENSG00000197372	tier1	-	-	63	0	0.00	26	14	35.00
DST	0	genome.wustl.edu	37	6	56468987	56468987	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	56468987	56468987	A	T	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	missense	c.10340	p.I3447N	0.000	superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	33	0	0.00	28	23	45.10
EEPD1	0	genome.wustl.edu	37	7	36336745	36336745	+	Nonsense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	36336745	36336745	A	T	SNP	EEPD1	ENST00000242108	human	ensembl	74_37	+1	known	nonsense	c.1459	p.K487*	0.948	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	pfam_HhH_motif,pfam_Endo/exonuclease/phosphatase,pfam_GspK,superfamily_Endo/exonuclease/phosphatase,superfamily_RuvA_2-like,smart_Hlx-hairpin-Hlx_DNA-bd_motif,tigrfam_Competence_ComEA_HhH	-	no_errors	EEPD1	HGNC	ENSG00000122547	tier1	-	-	32	0	0.00	29	17	36.96
CDH6	0	genome.wustl.edu	37	5	31317804	31317804	+	Missense_Mutation	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	31317804	31317804	G	C	SNP	CDH6	ENST00000265071	human	ensembl	74_37	+1	known	missense	c.1655	p.R552P	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH6	HGNC	ENSG00000113361	tier1	-	-	30	0	0.00	12	12	50.00
DENND1C	0	genome.wustl.edu	37	19	6468448	6468448	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	6468448	6468448	G	T	SNP	DENND1C	ENST00000381480	human	ensembl	74_37	-1	known	missense	c.1588	p.P530T	0.045	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND1C	HGNC	ENSG00000205744	tier1	-	-	37	0	0.00	39	11	22.00
BIN2	0	genome.wustl.edu	37	12	51707630	51707630	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	51707630	51707630	C	A	SNP	BIN2	ENST00000267012	human	ensembl	74_37	-1	known	missense	c.139	p.A47S	1.000	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom,prints_Amphiphysin	-	no_errors	BIN2	HGNC	ENSG00000110934	tier1	-	-	71	0	0.00	74	19	20.43
TFG	0	genome.wustl.edu	37	3	100455492	100455492	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	100455492	100455492	A	G	SNP	TFG	ENST00000240851	human	ensembl	74_37	+1	known	missense	c.653	p.H218R	1.000	NULL	pfam_OPR_PB1,smart_OPR_PB1	-	no_errors	TFG	HGNC	ENSG00000114354	tier1	-	-	53	0	0.00	41	9	17.65
LAMA1	0	genome.wustl.edu	37	18	6961989	6961989	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	6961989	6961989	G	T	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.7407	p.D2469E	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	45	0	0.00	34	8	19.05
DDX4	0	genome.wustl.edu	37	5	55110912	55110912	+	Silent	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	55110912	55110912	T	C	SNP	DDX4	ENST00000505374	human	ensembl	74_37	+1	known	silent	c.1899	p.R633	0.995	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX4	HGNC	ENSG00000152670	tier1	-	-	94	0	0.00	63	29	31.52
TPD52L2	0	genome.wustl.edu	37	20	62514152	62514152	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	20	62514152	62514152	G	T	SNP	TPD52L2	ENST00000217121	human	ensembl	74_37	+1	known	missense	c.455	p.S152I	1.000	pfam_TPD52	pfam_TPD52	-	no_errors	TPD52L2	HGNC	ENSG00000101150	tier1	-	-	19	0	0.00	25	5	16.67
NPLOC4	0	genome.wustl.edu	37	17	79580153	79580154	+	Splice_Site	INS	-	-	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	79580153	79580154	-	A	INS	NPLOC4	ENST00000571562	human	ensembl	74_37	-1	known	splice_site_ins	c.NULL	NULL	0.011:0.010	-	-	-	no_errors	NPLOC4	HGNC	ENSG00000182446	tier1			12	0	0.00	7	2	22.22
CAMTA1	0	genome.wustl.edu	37	1	7700597	7700597	+	Silent	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	7700597	7700597	G	C	SNP	CAMTA1	ENST00000303635	human	ensembl	74_37	+1	known	silent	c.648	p.G216	1.000	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA1	HGNC	ENSG00000171735	tier1	-	-	45	0	0.00	49	8	13.79
DSG1	0	genome.wustl.edu	37	18	28919755	28919755	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	28919755	28919755	G	A	SNP	DSG1	ENST00000257192	human	ensembl	74_37	+1	known	missense	c.1454	p.S485N	0.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Desmosomal_cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Desmoglein,prints_Cadherin,prints_Desmosomal_cadherin	-	no_errors	DSG1	HGNC	ENSG00000134760	tier1	-	-	42	0	0.00	13	10	43.48
EYA4	0	genome.wustl.edu	37	6	133783843	133783843	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	133783843	133783843	A	T	SNP	EYA4	ENST00000355167	human	ensembl	74_37	+1	known	missense	c.665	p.Y222F	1.000	NULL	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA4	HGNC	ENSG00000112319	tier1	-	-	42	0	0.00	36	13	26.53
PCNT	0	genome.wustl.edu	37	21	47818157	47818157	+	Silent	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	21	47818157	47818157	G	T	SNP	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	silent	c.4572	p.P1524	0.000	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299	tier1	-	-	16	0	0.00	23	6	20.00
PRIM2	0	genome.wustl.edu	37	6	57512787	57512788	+	RNA	INS	-	-	CACCAAGGC			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	57512787	57512788	-	CACCAAGGC	INS	PRIM2	ENST00000389488	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.057:0.034	-	-	-	no_errors	PRIM2	HGNC	ENSG00000146143	tier1			NA	NA	NA	NA	NA	NA
ZNF335	0	genome.wustl.edu	37	20	44592741	44592741	+	RNA	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	20	44592741	44592741	T	A	SNP	ZNF335	ENST00000475002	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF335	HGNC	ENSG00000198026	tier1	-	-	20	0	0.00	10	12	54.55
LRRC70	0	genome.wustl.edu	37	5	61875951	61875951	+	Missense_Mutation	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	61875951	61875951	G	C	SNP	LRRC70	ENST00000334994	human	ensembl	74_37	+1	known	missense	c.686	p.S229T	0.264	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC70	HGNC	ENSG00000186105	tier1	-	-	37	0	0.00	32	7	17.95
SPRTN	0	genome.wustl.edu	37	1	231488827	231488827	+	Missense_Mutation	SNP	T	T	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	231488827	231488827	T	G	SNP	SPRTN	ENST00000295050	human	ensembl	74_37	+1	known	missense	c.1190	p.V397G	0.000	NULL	pfam_SprT-like_domain,smart_SprT-like_domain,smart_Znf_Rad18_put	-	no_errors	SPRTN	HGNC	ENSG00000010072	tier1	-	-	26	0	0.00	36	15	29.41
CYBB	0	genome.wustl.edu	37	X	37660601	37660601	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	37660601	37660601	G	T	SNP	CYBB	ENST00000378588	human	ensembl	74_37	+1	known	missense	c.897	p.K299N	1.000	pfam_FAD-bd_8,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl	pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	-	no_errors	CYBB	HGNC	ENSG00000165168	tier1	-	-	51	0	0.00	8	32	80.00
NBAS	0	genome.wustl.edu	37	2	15555741	15555741	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	15555741	15555741	C	-	DEL	NBAS	ENST00000281513	human	ensembl	74_37	-1	known	frame_shift_del	c.2866	p.E956fs	1.000	pfam_Sec39	pfam_Sec39,superfamily_Quino_amine_DH_bsu	-	no_errors	NBAS	HGNC	ENSG00000151779	tier1			63	0	0.00	35	19	35.19
KRT38	0	genome.wustl.edu	37	17	39594392	39594392	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	39594392	39594392	C	T	SNP	KRT38	ENST00000246646	human	ensembl	74_37	-1	known	silent	c.1194	p.E398	0.998	pfam_IF	pfam_IF,prints_Keratin_I	-	no_errors	KRT38	HGNC	ENSG00000171360	tier1	-	-	117	0	0.00	84	45	34.88
DMXL1	0	genome.wustl.edu	37	5	118502375	118502375	+	Nonsense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	118502375	118502375	A	T	SNP	DMXL1	ENST00000539542	human	ensembl	74_37	+1	known	nonsense	c.5035	p.K1679*	1.000	pfam_Rav1p_C	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL1	HGNC	ENSG00000172869	tier1	-	-	40	0	0.00	35	7	16.67
HSPA2	0	genome.wustl.edu	37	14	65007483	65007483	+	RNA	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	65007483	65007483	C	T	SNP	HSPA2	ENST00000554883	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	HSPA2	HGNC	ENSG00000126803	tier1	-	-	34	0	0.00	14	11	44.00
KRTAP11-1	0	genome.wustl.edu	37	21	32253537	32253537	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	21	32253537	32253537	G	T	SNP	KRTAP11-1	ENST00000332378	human	ensembl	74_37	-1	known	missense	c.307	p.P103T	0.938	pfam_KRTAP_PMG	pfam_KRTAP_PMG	-	no_errors	KRTAP11-1	HGNC	ENSG00000182591	tier1	-	-	39	0	0.00	28	22	44.00
KIAA0368	0	genome.wustl.edu	37	9	114192865	114192865	+	Nonsense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	114192865	114192865	T	A	SNP	KIAA0368	ENST00000259335	human	ensembl	74_37	-1	known	nonsense	c.1426	p.K476*	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	KIAA0368	HGNC	ENSG00000136813	tier1	-	-	35	0	0.00	10	12	54.55
EGFLAM	0	genome.wustl.edu	37	5	38352379	38352379	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	38352379	38352379	C	T	SNP	EGFLAM	ENST00000354891	human	ensembl	74_37	+1	known	missense	c.491	p.P164L	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Laminin_G,pfam_Fibronectin_type3,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Laminin_G	-	no_errors	EGFLAM	HGNC	ENSG00000164318	tier1	-	-	59	0	0.00	44	16	26.67
JPH3	0	genome.wustl.edu	37	16	87678385	87678385	+	Missense_Mutation	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	87678385	87678385	G	C	SNP	JPH3	ENST00000284262	human	ensembl	74_37	+1	known	missense	c.904	p.V302L	0.994	pirsf_Junctophilin,pfam_MORN,smart_MORN	pirsf_Junctophilin,pfam_MORN,smart_MORN	-	no_errors	JPH3	HGNC	ENSG00000154118	tier1	-	-	65	0	0.00	36	17	31.48
SPIN1	0	genome.wustl.edu	37	9	91090109	91090109	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	91090109	91090109	G	T	SNP	SPIN1	ENST00000375859	human	ensembl	74_37	+1	known	missense	c.706	p.V236L	1.000	pfam_Spin_Ssty	pfam_Spin_Ssty	-	no_errors	SPIN1	HGNC	ENSG00000106723	tier1	-	-	41	0	0.00	8	12	60.00
ZNF92	0	genome.wustl.edu	37	7	64863304	64863304	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	64863304	64863304	G	T	SNP	ZNF92	ENST00000328747	human	ensembl	74_37	+1	known	missense	c.277	p.D93Y	0.157	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF92	HGNC	ENSG00000146757	tier1	-	-	51	0	0.00	29	8	21.62
TAAR5	0	genome.wustl.edu	37	6	132910435	132910435	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	132910435	132910435	C	A	SNP	TAAR5	ENST00000258034	human	ensembl	74_37	-1	known	missense	c.391	p.D131Y	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_TAAR_fam	-	no_errors	TAAR5	HGNC	ENSG00000135569	tier1	-	-	32	0	0.00	24	7	21.88
ALMS1	0	genome.wustl.edu	37	2	73717952	73717952	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	73717952	73717952	A	G	SNP	ALMS1	ENST00000264448	human	ensembl	74_37	+1	known	missense	c.8863	p.I2955V	0.001	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127	tier1	-	-	44	0	0.00	16	22	57.89
OR9Q2	0	genome.wustl.edu	37	11	57958663	57958663	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	57958663	57958663	G	T	SNP	OR9Q2	ENST00000311591	human	ensembl	74_37	+1	known	missense	c.701	p.R234L	0.789	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR9Q2	HGNC	ENSG00000186513	tier1	-	-	46	0	0.00	34	14	28.57
TCP1	0	genome.wustl.edu	37	6	160210591	160210591	+	RNA	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	160210591	160210591	T	A	SNP	TCP1	ENST00000543532	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TCP1	HGNC	ENSG00000120438	tier1	-	-	27	0	0.00	10	11	52.38
PTPRE	0	genome.wustl.edu	37	10	129877922	129877922	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	129877922	129877922	G	A	SNP	PTPRE	ENST00000254667	human	ensembl	74_37	+1	known	missense	c.1991	p.S664N	1.000	pirsf_Tyr_Pase_rcpt_a/e-type,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Tyr_Pase_rcpt_a/e-type,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRE	HGNC	ENSG00000132334	tier1	-	-	47	0	0.00	22	23	51.11
MGMT	0	genome.wustl.edu	37	10	131265529	131265529	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	131265529	131265529	A	T	SNP	MGMT	ENST00000306010	human	ensembl	74_37	+1	known	missense	c.50	p.Q17L	0.000	NULL	pfam_MethylDNA_cys_MeTrfase_DNA-bd,pfam_MethylG_MeTrfase,superfamily_MethylDNA_cys_MeTrfase_DNA-bd,tigrfam_MethylDNA_cys_MeTrfase_DNA-bd	-	no_errors	MGMT	HGNC	ENSG00000170430	tier1	-	-	39	0	0.00	23	30	56.60
ZCCHC2	0	genome.wustl.edu	37	18	60242093	60242093	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	60242093	60242093	G	A	SNP	ZCCHC2	ENST00000269499	human	ensembl	74_37	+1	known	missense	c.2779	p.V927M	0.005	NULL	pfam_Znf_CCHC,superfamily_Phox,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC2	HGNC	ENSG00000141664	tier1	-	-	31	0	0.00	11	7	38.89
MUC17	0	genome.wustl.edu	37	7	100677160	100677160	+	Silent	SNP	T	T	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	100677160	100677160	T	G	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	silent	c.2463	p.P821	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876	tier1	-	-	112	1	0.88	67	24	26.37
MUSK	0	genome.wustl.edu	37	9	113509957	113509957	+	Missense_Mutation	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	113509957	113509957	C	G	SNP	MUSK	ENST00000374448	human	ensembl	74_37	+1	known	missense	c.790	p.R264G	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Frizzled_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MUSK	HGNC	ENSG00000030304	tier1	-	-	42	0	0.00	35	13	27.08
SRCIN1	0	genome.wustl.edu	37	17	36708082	36708082	+	RNA	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	36708082	36708082	C	T	SNP	SRCIN1	ENST00000578160	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SRCIN1	HGNC	ENSG00000017373	tier1	-	-	45	0	0.00	19	25	56.82
GPRIN2	0	genome.wustl.edu	37	10	46999814	46999814	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	46999814	46999814	G	A	SNP	GPRIN2	ENST00000374314	human	ensembl	74_37	+1	known	missense	c.934	p.D312N	1.000	NULL	NULL	-	no_errors	GPRIN2	HGNC	ENSG00000204175	tier1	-	-	91	0	0.00	76	7	8.43
CCDC14	0	genome.wustl.edu	37	3	123616253	123616253	+	RNA	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	123616253	123616253	A	G	SNP	CCDC14	ENST00000463996	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	CCDC14	HGNC	ENSG00000175455	tier1	-	-	42	0	0.00	16	18	52.94
DNAH11	0	genome.wustl.edu	37	7	21599254	21599254	+	Silent	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	21599254	21599254	A	T	SNP	DNAH11	ENST00000328843	human	ensembl	74_37	+1	known	silent	c.726	p.A242	0.951	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH11	HGNC	ENSG00000105877	tier1	-	-	32	0	0.00	27	27	50.00
PDE4C	0	genome.wustl.edu	37	19	18329779	18329779	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	18329779	18329779	G	A	SNP	PDE4C	ENST00000355502	human	ensembl	74_37	-1	known	missense	c.1036	p.L346F	0.982	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE4C	HGNC	ENSG00000105650	tier1	-	-	34	0	0.00	36	25	40.98
SAMD4B	0	genome.wustl.edu	37	19	39847704	39847704	+	Silent	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	39847704	39847704	G	C	SNP	SAMD4B	ENST00000314471	human	ensembl	74_37	+1	known	silent	c.171	p.L57	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM	-	no_errors	SAMD4B	HGNC	ENSG00000179134	tier1	-	-	50	0	0.00	18	26	59.09
RRN3	0	genome.wustl.edu	37	16	15185193	15185193	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	15185193	15185193	C	A	SNP	RRN3	ENST00000198767	human	ensembl	74_37	-1	known	missense	c.231	p.Q77H	1.000	pfam_RNA_pol_I_trans_ini_fac_RRN3,superfamily_ARM-type_fold	pfam_RNA_pol_I_trans_ini_fac_RRN3,superfamily_ARM-type_fold	-	no_errors	RRN3	HGNC	ENSG00000085721	tier1	-	-	56	0	0.00	34	18	34.62
TTLL6	0	genome.wustl.edu	37	17	46878680	46878680	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	46878680	46878680	C	A	SNP	TTLL6	ENST00000393382	human	ensembl	74_37	-1	known	missense	c.548	p.R183L	1.000	pfam_TTL/TTLL_fam	pfam_TTL/TTLL_fam	-	no_errors	TTLL6	HGNC	ENSG00000170703	tier1	-	-	46	0	0.00	31	15	32.61
MRPL2	0	genome.wustl.edu	37	6	43023872	43023872	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	43023872	43023872	T	A	SNP	MRPL2	ENST00000388752	human	ensembl	74_37	-1	known	missense	c.467	p.N156I	1.000	pfam_Rbsml_prot_L2_RNA-bd_dom,superfamily_NA-bd_OB-fold	pfam_Ribosomal_L2_C,pfam_Rbsml_prot_L2_RNA-bd_dom,superfamily_Translation_prot_SH3-like,superfamily_NA-bd_OB-fold	-	no_errors	MRPL2	HGNC	ENSG00000112651	tier1	-	-	58	0	0.00	58	6	9.38
ZNF226	0	genome.wustl.edu	37	19	44681177	44681177	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	44681177	44681177	A	G	SNP	ZNF226	ENST00000337433	human	ensembl	74_37	+1	known	missense	c.1762	p.K588E	0.992	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF226	HGNC	ENSG00000167380	tier1	-	-	66	0	0.00	50	11	18.03
KMT2D	0	genome.wustl.edu	37	12	49420473	49420473	+	Silent	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	49420473	49420473	G	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	silent	c.15276	p.C5092	1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Znf_RING	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	41	0	0.00	24	12	33.33
RNF144A	0	genome.wustl.edu	37	2	7170309	7170309	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	7170309	7170309	G	T	SNP	RNF144A	ENST00000320892	human	ensembl	74_37	+1	known	missense	c.710	p.G237V	1.000	NULL	pfam_Znf_C6HC,smart_Znf_C6HC,pfscan_Znf_RING	-	no_errors	RNF144A	HGNC	ENSG00000151692	tier1	-	-	49	0	0.00	16	18	52.94
TSHZ3	0	genome.wustl.edu	37	19	31770004	31770004	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	31770004	31770004	T	A	SNP	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	missense	c.695	p.H232L	1.000	smart_Znf_C2H2-like	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297	tier1	-	-	50	0	0.00	40	26	39.39
TFB1M	0	genome.wustl.edu	37	6	155635357	155635357	+	RNA	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	155635357	155635357	C	A	SNP	TFB1M	ENST00000466349	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	TFB1M	HGNC	ENSG00000029639	tier1	-	-	37	0	0.00	14	10	41.67
NPAP1	0	genome.wustl.edu	37	15	24922187	24922187	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	24922187	24922187	C	A	SNP	NPAP1	ENST00000329468	human	ensembl	74_37	+1	known	missense	c.1173	p.N391K	0.000	NULL	NULL	-	no_errors	NPAP1	HGNC	ENSG00000185823	tier1	-	-	50	0	0.00	18	28	60.87
RREB1	0	genome.wustl.edu	37	6	7246908	7246908	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	7246908	7246908	G	T	SNP	RREB1	ENST00000379938	human	ensembl	74_37	+1	known	missense	c.4225	p.D1409Y	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782	tier1	-	-	29	0	0.00	13	5	27.78
SLC2A13	0	genome.wustl.edu	37	12	40258570	40258570	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	40258570	40258570	C	A	SNP	SLC2A13	ENST00000280871	human	ensembl	74_37	-1	known	missense	c.1313	p.R438I	1.000	superfamily_MFS_dom_general_subst_transpt,superfamily_Plexin-like_fold,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,superfamily_Plexin-like_fold,prints_Sugar/inositol_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A13	HGNC	ENSG00000151229	tier1	-	-	36	0	0.00	38	27	41.54
SETD2	0	genome.wustl.edu	37	3	47164337	47164337	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	47164337	47164337	C	T	SNP	SETD2	ENST00000409792	human	ensembl	74_37	-1	known	missense	c.1789	p.G597S	1.000	NULL	pfam_SRI,pfam_SET_dom,pfam_WW_dom,superfamily_WW_dom,superfamily_Ferritin-like_SF,smart_AWS,smart_SET_dom,smart_Post-SET_dom,smart_WW_dom,pfscan_AWS,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_WW_dom	-	no_errors	SETD2	HGNC	ENSG00000181555	tier1	-	-	33	0	0.00	14	14	50.00
ITGA11	0	genome.wustl.edu	37	15	68609678	68609678	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	68609678	68609678	C	T	SNP	ITGA11	ENST00000315757	human	ensembl	74_37	-1	known	silent	c.2640	p.E880	1.000	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA11	HGNC	ENSG00000137809	tier1	-	-	55	0	0.00	35	32	47.76
MT-ND6	0	genome.wustl.edu	37	MT	14167	14167	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	MT	14167	14167	C	T	SNP	MT-ND6	ENST00000361681	human	ensembl	74_37	-1	known	silent	c.507	p.E169	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase_su6	pfam_NADH_UbQ/plastoQ_OxRdtase_su6	-	no_errors	MT-ND6	HGNC	ENSG00000198695	tier1	rs28357670	-	37	0	0.00	16	4	20.00
GOLGA8G	0	genome.wustl.edu	37	15	28771107	28771107	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	28771107	28771107	C	A	SNP	GOLGA8G	ENST00000525590	human	ensembl	74_37	-1	novel	missense	c.1197	p.Q399H	0.996	NULL	NULL	-	no_errors	GOLGA8G	HGNC	ENSG00000183629	tier1	-	-	83	0	0.00	76	17	18.28
LINGO3	0	genome.wustl.edu	37	19	2291493	2291493	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	2291493	2291493	G	T	SNP	LINGO3	ENST00000404279	human	ensembl	74_37	-1	known	missense	c.283	p.P95T	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LINGO3	HGNC	ENSG00000220008	tier1	-	-	56	0	0.00	38	41	51.90
C15orf39	0	genome.wustl.edu	37	15	75499132	75499132	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	75499132	75499132	G	A	SNP	C15orf39	ENST00000360639	human	ensembl	74_37	+1	known	missense	c.743	p.S248N	0.116	NULL	NULL	-	no_errors	C15orf39	HGNC	ENSG00000167173	tier1	-	-	46	0	0.00	31	33	51.56
NDST1	0	genome.wustl.edu	37	5	149914542	149914542	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	149914542	149914542	G	T	SNP	NDST1	ENST00000261797	human	ensembl	74_37	+1	known	missense	c.1210	p.V404L	1.000	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST1	HGNC	ENSG00000070614	tier1	-	-	57	0	0.00	28	9	24.32
SMAD6	0	genome.wustl.edu	37	15	67073693	67073693	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	67073693	67073693	G	T	SNP	SMAD6	ENST00000288840	human	ensembl	74_37	+1	known	missense	c.1311	p.K437N	1.000	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD6	HGNC	ENSG00000137834	tier1	-	-	15	0	0.00	7	6	46.15
SEMA3A	0	genome.wustl.edu	37	7	83764202	83764202	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	83764202	83764202	A	T	SNP	SEMA3A	ENST00000265362	human	ensembl	74_37	-1	known	missense	c.178	p.F60I	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3A	HGNC	ENSG00000075213	tier1	-	-	45	0	0.00	29	18	38.30
TRO	0	genome.wustl.edu	37	X	54956841	54956841	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	54956841	54956841	C	T	SNP	TRO	ENST00000173898	human	ensembl	74_37	+1	known	silent	c.3684	p.G1228	0.000	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	TRO	HGNC	ENSG00000067445	tier1	-	-	118	0	0.00	87	69	44.23
TSGA13	0	genome.wustl.edu	37	7	130364105	130364105	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	130364105	130364105	T	A	SNP	TSGA13	ENST00000356588	human	ensembl	74_37	-1	known	missense	c.275	p.Q92L	1.000	NULL	NULL	-	no_errors	TSGA13	HGNC	ENSG00000213265	tier1	-	-	106	0	0.00	42	65	60.75
CPNE2	0	genome.wustl.edu	37	16	57159802	57159802	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	57159802	57159802	A	G	SNP	CPNE2	ENST00000290776	human	ensembl	74_37	+1	known	missense	c.958	p.N320D	1.000	smart_VWF_A	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom	-	no_errors	CPNE2	HGNC	ENSG00000140848	tier1	-	-	111	0	0.00	74	15	16.85
FAM149A	0	genome.wustl.edu	37	4	187075698	187075698	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	187075698	187075698	G	T	SNP	FAM149A	ENST00000356371	human	ensembl	74_37	+1	known	missense	c.1162	p.V388F	0.000	NULL	pfam_DUF3719	-	no_errors	FAM149A	HGNC	ENSG00000109794	tier1	-	-	57	0	0.00	12	52	81.25
TRPV5	0	genome.wustl.edu	37	7	142609744	142609744	+	Silent	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	142609744	142609744	G	T	SNP	TRPV5	ENST00000265310	human	ensembl	74_37	-1	known	silent	c.1692	p.I564	1.000	tigrfam_TRP_channel	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV5/TRPV6,prints_TRPV5,prints_Ankyrin_rpt,tigrfam_TRP_channel	-	no_errors	TRPV5	HGNC	ENSG00000127412	tier1	-	-	68	0	0.00	37	19	33.93
ZNF556	0	genome.wustl.edu	37	19	2877722	2877722	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	2877722	2877722	G	A	SNP	ZNF556	ENST00000307635	human	ensembl	74_37	+1	known	missense	c.766	p.G256R	0.953	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF556	HGNC	ENSG00000172000	tier1	-	-	93	0	0.00	50	44	46.81
ZNF33B	0	genome.wustl.edu	37	10	43089291	43089291	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	43089291	43089291	C	T	SNP	ZNF33B	ENST00000359467	human	ensembl	74_37	-1	known	silent	c.1107	p.K369	0.851	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF33B	HGNC	ENSG00000196693	tier1	-	-	63	0	0.00	29	24	45.28
OR1F1	0	genome.wustl.edu	37	16	3255108	3255108	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	3255108	3255108	T	A	SNP	OR1F1	ENST00000304646	human	ensembl	74_37	+1	known	missense	c.862	p.F288I	0.705	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1F1	HGNC	ENSG00000168124	tier1	-	-	20	0	0.00	12	22	64.71
RPGR	0	genome.wustl.edu	37	X	38128998	38128998	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	38128998	38128998	C	T	SNP	RPGR	ENST00000339363	human	ensembl	74_37	-1	known	missense	c.2944	p.D982N	0.877	superfamily_RCC1/BLIP-II	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RPGR	HGNC	ENSG00000156313	tier1	-	-	36	0	0.00	7	26	78.79
GRM1	0	genome.wustl.edu	37	6	146480580	146480580	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	146480580	146480580	G	T	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.797	p.G266V	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822	tier1	-	-	43	0	0.00	27	6	18.18
SLC22A15	0	genome.wustl.edu	37	1	116609198	116609198	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	116609198	116609198	G	T	SNP	SLC22A15	ENST00000369503	human	ensembl	74_37	+1	known	missense	c.1423	p.G475C	0.998	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A15	HGNC	ENSG00000163393	tier1	-	-	94	0	0.00	86	15	14.85
LILRA3	0	genome.wustl.edu	37	19	54801968	54801968	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	54801968	54801968	A	T	SNP	LILRA3	ENST00000251390	human	ensembl	74_37	-1	known	missense	c.1220	p.L407Q	0.007	smart_Ig_sub,pirsf_A1B_glyco/leuk_Ig-like_rcpt	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	-	no_errors	LILRA3	HGNC	ENSG00000170866	tier1	-	-	66	0	0.00	7	26	78.79
DNAH7	0	genome.wustl.edu	37	2	196825152	196825152	+	Missense_Mutation	SNP	A	A	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	196825152	196825152	A	C	SNP	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	missense	c.2723	p.M908R	1.000	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997	tier1	-	-	58	0	0.00	36	17	32.08
RGPD2	0	genome.wustl.edu	37	2	88082315	88082315	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	88082315	88082315	G	A	SNP	RGPD2	ENST00000398146	human	ensembl	74_37	-1	known	nonsense	c.4228	p.Q1410*	1.000	pfam_Ran_bind_dom,smart_Ran_bind_dom,pfscan_Ran_bind_dom	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_2,pfam_TPR_1,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD2	HGNC	ENSG00000185304	tier1	-	-	42	0	0.00	14	22	61.11
ZNF574	0	genome.wustl.edu	37	19	42583008	42583008	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	42583008	42583008	C	A	SNP	ZNF574	ENST00000222339	human	ensembl	74_37	+1	known	missense	c.520	p.L174M	0.998	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF574	HGNC	ENSG00000105732	tier1	-	-	31	0	0.00	11	12	52.17
WIPI1	0	genome.wustl.edu	37	17	66453573	66453581	+	RNA	DEL	GCCCGGGAA	GCCCGGGAA	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	GCCCGGGAA	GCCCGGGAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	66453573	66453581	GCCCGGGAA	-	DEL	WIPI1	ENST00000586815	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000:1.000:0.999:0.975:0.979:0.991:0.991:0.998	-	-	-	no_errors	WIPI1	HGNC	ENSG00000070540	tier1			NA	NA	NA	NA	NA	NA
LILRA5	0	genome.wustl.edu	37	19	54823334	54823334	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	54823334	54823334	G	T	SNP	LILRA5	ENST00000301219	human	ensembl	74_37	-1	known	missense	c.209	p.T70N	0.005	smart_Ig_sub,smart_Ig_sub2	smart_Ig_sub,smart_Ig_sub2	-	no_errors	LILRA5	HGNC	ENSG00000187116	tier1	-	-	49	0	0.00	17	23	57.50
GNB5	0	genome.wustl.edu	37	15	52414894	52414894	+	RNA	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	52414894	52414894	C	G	SNP	GNB5	ENST00000559348	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GNB5	HGNC	ENSG00000069966	tier1	-	-	17	0	0.00	12	13	52.00
VTRNA2-1	0	genome.wustl.edu	37	5	135416191	135416191	+	RNA	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	135416191	135416191	G	T	SNP	VTRNA2-1	ENST00000365160	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	VTRNA2-1	HGNC	ENSG00000270123	tier1	-	-	27	0	0.00	8	9	52.94
ZNF7	0	genome.wustl.edu	37	8	146063518	146063518	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	146063518	146063518	T	C	SNP	ZNF7	ENST00000528130	human	ensembl	74_37	+1	putative	missense	c.373	p.F125L	0.002	NULL	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF7	HGNC	ENSG00000147789	tier1	-	-	62	0	0.00	60	19	24.05
ZNF318	0	genome.wustl.edu	37	6	43306185	43306185	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	43306185	43306185	C	T	SNP	ZNF318	ENST00000361428	human	ensembl	74_37	-1	known	missense	c.5551	p.V1851I	0.043	NULL	smart_Znf_U1	-	no_errors	ZNF318	HGNC	ENSG00000171467	tier1	-	-	64	0	0.00	23	47	67.14
DNAH5	0	genome.wustl.edu	37	5	13914044	13914044	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	13914044	13914044	C	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	silent	c.1344	p.K448	1.000	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	69	0	0.00	26	14	35.00
CCR3	0	genome.wustl.edu	37	3	46306688	46306688	+	Silent	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	46306688	46306688	C	A	SNP	CCR3	ENST00000545097	human	ensembl	74_37	+1	known	silent	c.102	p.T34	0.982	prints_Chemokine_CCR3,prints_Chemokine_CCR1	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CCR3,prints_Chemokine_CCR1	-	no_errors	CCR3	HGNC	ENSG00000183625	tier1	-	-	61	0	0.00	49	26	34.67
KANSL1	0	genome.wustl.edu	37	17	44249019	44249019	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	44249019	44249019	C	A	SNP	KANSL1	ENST00000262419	human	ensembl	74_37	-1	known	missense	c.491	p.S164I	1.000	NULL	NULL	-	no_errors	KANSL1	HGNC	ENSG00000120071	tier1	-	-	46	0	0.00	39	18	31.58
GPR98	0	genome.wustl.edu	37	5	89943377	89943377	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	89943377	89943377	T	C	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.3085	p.S1029P	0.641	pfam_Calx_beta,smart_Calx_beta	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	tier1	-	-	29	0	0.00	31	8	20.51
HYDIN	0	genome.wustl.edu	37	16	70913237	70913237	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	70913237	70913237	G	A	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	missense	c.10520	p.P3507L	1.000	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	-	-	29	0	0.00	14	10	41.67
SNORD115-1	0	genome.wustl.edu	37	15	25415886	25415886	+	RNA	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	25415886	25415886	C	T	SNP	SNORD115-1	ENST00000364961	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SNORD115-1	HGNC	ENSG00000201831	tier1	-	-	48	0	0.00	32	16	33.33
RFWD2	0	genome.wustl.edu	37	1	176105685	176105685	+	Splice_Site	SNP	T	T	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	176105685	176105685	T	G	SNP	RFWD2	ENST00000367669	human	ensembl	74_37	-1	known	splice_site	c.832-2	e7-2	1.000	-	-	-	no_errors	RFWD2	HGNC	ENSG00000143207	tier1	-	-	28	0	0.00	32	26	44.83
ALS2	0	genome.wustl.edu	37	2	202588123	202588123	+	Missense_Mutation	SNP	T	T	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	202588123	202588123	T	G	SNP	ALS2	ENST00000264276	human	ensembl	74_37	-1	known	missense	c.3554	p.Q1185P	1.000	pfam_MORN,smart_MORN	pfam_Reg_chr_condens,pfam_MORN,pfam_VPS9,pfam_DH-domain,superfamily_RCC1/BLIP-II,superfamily_DH-domain,smart_MORN,pfscan_VPS9,pfscan_Reg_chr_condens,pfscan_DH-domain,prints_Reg_chr_condens	-	no_errors	ALS2	HGNC	ENSG00000003393	tier1	-	-	51	0	0.00	39	15	27.78
ARHGAP36	0	genome.wustl.edu	37	X	130218635	130218635	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	130218635	130218635	T	C	SNP	ARHGAP36	ENST00000276211	human	ensembl	74_37	+1	known	missense	c.784	p.S262P	0.996	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP36	HGNC	ENSG00000147256	tier1	-	-	61	0	0.00	6	18	75.00
PADI3	0	genome.wustl.edu	37	1	17609478	17609478	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	17609478	17609478	C	A	SNP	PADI3	ENST00000375460	human	ensembl	74_37	+1	known	missense	c.1899	p.D633E	1.000	pfam_PAD_C,pirsf_Protein-arginine_deiminase_sub	pfam_PAD_C,pfam_Prot_Arg_deaminase_cen_dom,pfam_PAD_N,superfamily_Prot_Arg_deaminase_cen_dom,superfamily_Cupredoxin,pirsf_Protein-arginine_deiminase_sub	-	no_errors	PADI3	HGNC	ENSG00000142619	tier1	-	-	57	0	0.00	27	16	37.21
RPH3A	0	genome.wustl.edu	37	12	113334528	113334528	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	113334528	113334528	C	T	SNP	RPH3A	ENST00000389385	human	ensembl	74_37	+1	known	silent	c.2028	p.D676	1.000	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,pfam_Znf_FYVE-typ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel,prints_Synaptotagmin,prints_C2_dom	-	no_errors	RPH3A	HGNC	ENSG00000089169	tier1	-	-	39	0	0.00	21	16	43.24
KIF27	0	genome.wustl.edu	37	9	86530403	86530403	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	86530403	86530403	T	A	SNP	KIF27	ENST00000297814	human	ensembl	74_37	-1	known	missense	c.104	p.Q35L	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF27	HGNC	ENSG00000165115	tier1	-	-	106	1	0.93	42	56	57.14
IBSP	0	genome.wustl.edu	37	4	88732786	88732786	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	88732786	88732786	G	T	SNP	IBSP	ENST00000226284	human	ensembl	74_37	+1	known	missense	c.678	p.K226N	0.000	pfam_BSP_II	pfam_BSP_II	-	no_errors	IBSP	HGNC	ENSG00000029559	tier1	-	-	33	0	0.00	20	24	54.55
MFSD9	0	genome.wustl.edu	37	2	103335385	103335385	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	103335385	103335385	C	A	SNP	MFSD9	ENST00000258436	human	ensembl	74_37	-1	known	missense	c.919	p.V307F	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Tet-R_TetA/multi-R_MdtG	-	no_errors	MFSD9	HGNC	ENSG00000135953	tier1	-	-	39	0	0.00	25	10	28.57
OGT	0	genome.wustl.edu	37	X	70767761	70767761	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	70767761	70767761	G	T	SNP	OGT	ENST00000373719	human	ensembl	74_37	+1	known	missense	c.536	p.C179F	1.000	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	OGT	HGNC	ENSG00000147162	tier1	-	-	82	0	0.00	59	20	25.32
PLEKHA8	0	genome.wustl.edu	37	7	30101519	30101519	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	30101519	30101519	A	T	SNP	PLEKHA8	ENST00000449726	human	ensembl	74_37	+1	known	missense	c.1105	p.N369Y	0.999	pfam_Glycolipid_transfer_prot_dom,superfamily_Glycolipid_transfer_prot_dom	pfam_Glycolipid_transfer_prot_dom,pfam_Pleckstrin_homology,superfamily_Glycolipid_transfer_prot_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA8	HGNC	ENSG00000106086	tier1	-	-	40	0	0.00	36	20	35.71
CACNG8	0	genome.wustl.edu	37	19	54485332	54485332	+	Splice_Site	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	54485332	54485332	A	T	SNP	CACNG8	ENST00000270458	human	ensembl	74_37	+1	known	splice_site	c.509-2	e4-2	1.000	-	-	-	no_errors	CACNG8	HGNC	ENSG00000142408	tier1	-	-	27	0	0.00	12	16	57.14
ENSG00000230615	0	genome.wustl.edu	37	1	44569834	44569834	+	RNA	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	44569834	44569834	G	T	SNP	ENSG00000230615	ENST00000434244	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP5-1198O20.4	Clone_based_vega_gene	ENSG00000230615	tier1	-	-	60	0	0.00	33	32	49.23
PKD2L1	0	genome.wustl.edu	37	10	102089053	102089053	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	102089053	102089053	G	T	SNP	PKD2L1	ENST00000318222	human	ensembl	74_37	-1	known	missense	c.264	p.N88K	1.000	NULL	pfam_PKD1_2_channel,pfam_Ion_trans_dom,prints_PKD_2,prints_PKD_1	-	no_errors	PKD2L1	HGNC	ENSG00000107593	tier1	-	-	110	1	0.90	49	19	27.94
PDS5B	0	genome.wustl.edu	37	13	33233308	33233308	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	33233308	33233308	A	T	SNP	PDS5B	ENST00000315596	human	ensembl	74_37	+1	known	missense	c.515	p.K172I	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	PDS5B	HGNC	ENSG00000083642	tier1	-	-	68	0	0.00	44	20	31.25
PDE3A	0	genome.wustl.edu	37	12	20833184	20833184	+	Silent	SNP	A	A	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	20833184	20833184	A	C	SNP	PDE3A	ENST00000359062	human	ensembl	74_37	+1	known	silent	c.3405	p.P1135	0.002	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	-	no_errors	PDE3A	HGNC	ENSG00000172572	tier1	-	-	46	0	0.00	34	18	34.62
HNRNPA2B1	0	genome.wustl.edu	37	7	26235472	26235472	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	26235472	26235472	G	A	SNP	HNRNPA2B1	ENST00000354667	human	ensembl	74_37	-1	known	missense	c.752	p.P251L	1.000	NULL	pfam_RRM_dom,pfam_HnRNPA1,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPA2B1	HGNC	ENSG00000122566	tier1	-	-	19	0	0.00	15	10	40.00
SLC35A5	0	genome.wustl.edu	37	3	112289430	112289430	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	112289430	112289430	C	T	SNP	SLC35A5	ENST00000492406	human	ensembl	74_37	+1	known	silent	c.273	p.F91	0.004	pfam_Nuc_sug_transpt,pfam_UAA,pfam_Tpt_PEP_trans_dom,pirsf_UDP/CMP-sugar_transptr	pfam_Nuc_sug_transpt,pfam_UAA,pfam_DMT,pfam_Tpt_PEP_trans_dom,pirsf_UDP/CMP-sugar_transptr,tigrfam_UDPgal_transpt	-	no_errors	SLC35A5	HGNC	ENSG00000138459	tier1	-	-	70	0	0.00	47	11	18.97
MED12L	0	genome.wustl.edu	37	3	150877713	150877713	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	150877713	150877713	A	T	SNP	MED12L	ENST00000474524	human	ensembl	74_37	+1	known	missense	c.932	p.N311I	0.162	pfam_Mediator_Med12_LCEWAV	pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12,pfam_Mediator_Med12_catenin-bd	-	no_errors	MED12L	HGNC	ENSG00000144893	tier1	-	-	87	0	0.00	50	26	34.21
ABCB1	0	genome.wustl.edu	37	7	87168613	87168613	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	87168613	87168613	A	T	SNP	ABCB1	ENST00000265724	human	ensembl	74_37	-1	known	missense	c.2368	p.Y790N	0.961	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB1	HGNC	ENSG00000085563	tier1	-	-	38	0	0.00	16	9	36.00
PABPC1L	0	genome.wustl.edu	37	20	43547571	43547571	+	Silent	SNP	A	A	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	20	43547571	43547571	A	C	SNP	PABPC1L	ENST00000217073	human	ensembl	74_37	+1	known	silent	c.528	p.R176	0.277	tigrfam_PABP_1234	pfam_RRM_dom,pfam_PABP_HYD,superfamily_PABP_HYD,smart_RRM_dom,smart_RRM_dom_euk,smart_PABP_HYD,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC1L	HGNC	ENSG00000101104	tier1	-	-	29	0	0.00	8	14	63.64
SEPN1	0	genome.wustl.edu	37	1	26142334	26142334	+	RNA	DEL	G	G	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	26142334	26142334	G	-	DEL	SEPN1	ENST00000494537	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SEPN1	HGNC	ENSG00000162430	tier1			20	0	0.00	7	13	65.00
GABRA4	0	genome.wustl.edu	37	4	46979463	46979463	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	46979463	46979463	C	A	SNP	GABRA4	ENST00000264318	human	ensembl	74_37	-1	known	missense	c.458	p.R153I	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABBAa4_rcpt,prints_GABAA_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA4	HGNC	ENSG00000109158	tier1	-	-	31	0	0.00	16	23	58.97
DUOX2	0	genome.wustl.edu	37	15	45400282	45400282	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	45400282	45400282	C	A	SNP	DUOX2	ENST00000389039	human	ensembl	74_37	-1	known	missense	c.1537	p.D513Y	1.000	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr,prints_Recoverin	-	no_errors	DUOX2	HGNC	ENSG00000140279	tier1	-	-	63	0	0.00	49	39	44.32
MYH1	0	genome.wustl.edu	37	17	10415454	10415454	+	Silent	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	10415454	10415454	G	T	SNP	MYH1	ENST00000226207	human	ensembl	74_37	-1	known	silent	c.1203	p.A401	0.999	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH1	HGNC	ENSG00000109061	tier1	-	-	103	1	0.96	124	48	27.91
FAM188B	0	genome.wustl.edu	37	7	30878880	30878880	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	30878880	30878880	G	A	SNP	FAM188B	ENST00000265299	human	ensembl	74_37	+1	known	missense	c.1304	p.S435N	0.987	NULL	NULL	-	no_errors	FAM188B	HGNC	ENSG00000106125	tier1	-	-	29	0	0.00	31	7	18.42
DMXL1	0	genome.wustl.edu	37	5	118440889	118440889	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	118440889	118440889	G	T	SNP	DMXL1	ENST00000539542	human	ensembl	74_37	+1	known	missense	c.300	p.Q100H	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL1	HGNC	ENSG00000172869	tier1	-	-	38	0	0.00	29	32	52.46
NEAT1	0	genome.wustl.edu	37	11	65211920	65211920	+	RNA	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	65211920	65211920	G	T	SNP	NEAT1	ENST00000501122	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	NEAT1	HGNC	ENSG00000245532	tier1	-	-	41	0	0.00	21	26	55.32
COL3A1	0	genome.wustl.edu	37	2	189850403	189850403	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	189850403	189850403	A	G	SNP	COL3A1	ENST00000304636	human	ensembl	74_37	+1	known	missense	c.346	p.I116V	0.996	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL3A1	HGNC	ENSG00000168542	tier1	-	-	53	0	0.00	28	15	34.88
GAMT	0	genome.wustl.edu	37	19	1398810	1398810	+	Silent	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	1398810	1398810	C	A	SNP	GAMT	ENST00000447102	human	ensembl	74_37	-1	known	silent	c.675	p.L225	0.000	NULL	NULL	-	no_errors	GAMT	HGNC	ENSG00000130005	tier1	-	-	41	0	0.00	28	13	31.71
TTC21B	0	genome.wustl.edu	37	2	166764211	166764211	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	166764211	166764211	C	A	SNP	TTC21B	ENST00000243344	human	ensembl	74_37	-1	known	missense	c.2545	p.D849Y	0.997	smart_TPR_repeat,pfscan_TPR-contain_dom	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC21B	HGNC	ENSG00000123607	tier1	-	-	43	0	0.00	7	22	75.86
KIAA1211	0	genome.wustl.edu	37	4	57181180	57181180	+	Silent	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	57181180	57181180	G	A	SNP	KIAA1211	ENST00000504228	human	ensembl	74_37	+1	known	silent	c.1512	p.P504	0.000	NULL	NULL	-	no_errors	KIAA1211	HGNC	ENSG00000109265	tier1	-	-	31	0	0.00	22	9	29.03
FLT1	0	genome.wustl.edu	37	13	28896421	28896421	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	28896421	28896421	A	G	SNP	FLT1	ENST00000282397	human	ensembl	74_37	-1	known	missense	c.3029	p.M1010T	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR1_rcpt	-	no_errors	FLT1	HGNC	ENSG00000102755	tier1	-	-	37	0	0.00	12	8	40.00
VAV1	0	genome.wustl.edu	37	19	6829807	6829807	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	6829807	6829807	C	A	SNP	VAV1	ENST00000602142	human	ensembl	74_37	+1	known	missense	c.1276	p.L426M	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_CAMSAP_CH,pfam_SH2,pfam_CH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,smart_SH2,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain,prints_SH3_domain,prints_SH2,prints_SM22_calponin	-	no_errors	VAV1	HGNC	ENSG00000141968	tier1	-	-	61	0	0.00	43	47	52.22
SPHKAP	0	genome.wustl.edu	37	2	228882404	228882404	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	228882404	228882404	C	T	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	missense	c.3166	p.D1056N	1.000	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	tier1	-	-	23	0	0.00	7	18	72.00
CUX1	0	genome.wustl.edu	37	7	101882864	101882864	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	101882864	101882864	G	A	SNP	CUX1	ENST00000360264	human	ensembl	74_37	+1	known	missense	c.3920	p.R1307K	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_LemA-like_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX1	HGNC	ENSG00000257923	tier1	-	-	32	0	0.00	11	8	42.11
FAM46D	0	genome.wustl.edu	37	X	79699075	79699075	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	79699075	79699075	C	A	SNP	FAM46D	ENST00000308293	human	ensembl	74_37	+1	known	missense	c.1037	p.T346N	1.000	NULL	pfam_DUF1693	-	no_errors	FAM46D	HGNC	ENSG00000174016	tier1	-	-	31	0	0.00	31	9	22.50
GHRHR	0	genome.wustl.edu	37	7	31015475	31015475	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	31015475	31015475	T	A	SNP	GHRHR	ENST00000409316	human	ensembl	74_37	+1	putative	missense	c.265	p.S89T	0.975	NULL	NULL	-	no_errors	GHRHR	HGNC	ENSG00000106128	tier1	-	-	118	0	0.00	50	63	55.75
ZNF195	0	genome.wustl.edu	37	11	3380805	3380805	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	3380805	3380805	C	T	SNP	ZNF195	ENST00000399602	human	ensembl	74_37	-1	known	missense	c.1433	p.C478Y	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF195	HGNC	ENSG00000005801	tier1	-	-	108	0	0.00	19	44	69.84
C12orf80	0	genome.wustl.edu	37	12	52602154	52602154	+	RNA	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	52602154	52602154	G	T	SNP	C12orf80	ENST00000551332	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.031	-	-	-	no_errors	C12orf80	HGNC	ENSG00000257137	tier1	-	-	26	0	0.00	18	14	43.75
TTLL7	0	genome.wustl.edu	37	1	84386843	84386843	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	84386843	84386843	T	C	SNP	TTLL7	ENST00000260505	human	ensembl	74_37	-1	known	missense	c.1291	p.K431E	1.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL7	HGNC	ENSG00000137941	tier1	-	-	76	0	0.00	49	29	37.18
NBPF9	0	genome.wustl.edu	37	1	144826712	144826712	+	RNA	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	144826712	144826712	G	T	SNP	NBPF9	ENST00000488888	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	NBPF9	HGNC	ENSG00000168614	tier1	rs200477780	-	37	0	0.00	40	7	14.89
WRN	0	genome.wustl.edu	37	8	30938576	30938576	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	30938576	30938576	G	A	SNP	WRN	ENST00000298139	human	ensembl	74_37	+1	known	missense	c.1033	p.E345K	0.023	NULL	pfam_3'-5'_exonuclease_dom,pfam_Helicase_C,pfam_RQC_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_HRDC_dom,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,superfamily_HRDC-like,smart_3'-5'_exonuclease_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_HRDC_dom,pfscan_HRDC_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	WRN	HGNC	ENSG00000165392	tier1	-	-	34	0	0.00	8	10	55.56
SEC23B	0	genome.wustl.edu	37	20	18496340	18496340	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	20	18496340	18496340	A	G	SNP	SEC23B	ENST00000262544	human	ensembl	74_37	+1	known	missense	c.326	p.E109G	1.000	superfamily_Znf_Sec23_Sec24	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Gelsolin_dom,pfam_Znf_Sec23_Sec24,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC23B	HGNC	ENSG00000101310	tier1	-	-	39	0	0.00	18	68	79.07
TRIM27	0	genome.wustl.edu	37	6	28872295	28872295	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	28872295	28872295	C	A	SNP	TRIM27	ENST00000377199	human	ensembl	74_37	-1	known	missense	c.1094	p.C365F	1.000	superfamily_ConA-like_lec_gl_sf,smart_PRY,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin,prints_Znf_B-box_chordata	-	no_errors	TRIM27	HGNC	ENSG00000204713	tier1	-	-	64	0	0.00	39	40	50.63
CNTN4	0	genome.wustl.edu	37	3	3081819	3081819	+	Silent	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	3081819	3081819	A	T	SNP	CNTN4	ENST00000397461	human	ensembl	74_37	+1	known	silent	c.2262	p.S754	0.002	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN4	HGNC	ENSG00000144619	tier1	-	-	69	0	0.00	45	19	29.69
DTX2P1-UPK3BP1-PMS2P11	0	genome.wustl.edu	37	7	76634981	76634981	+	RNA	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	76634981	76634981	A	G	SNP	DTX2P1-UPK3BP1-PMS2P11	ENST00000579700	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.061	-	-	-	no_errors	DTX2P1-UPK3BP1-PMS2P11	HGNC	ENSG00000265479	tier1	-	-	56	0	0.00	46	5	9.80
ENSG00000253251	0	genome.wustl.edu	37	5	64925961	64925961	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	64925961	64925961	G	T	SNP	ENSG00000253251	ENST00000510585	human	ensembl	74_37	+1	putative	missense	c.547	p.D183Y	1.000	NULL	NULL	-	no_errors	CTC-534A2.2	Clone_based_vega_gene	ENSG00000253251	tier1	-	-	30	0	0.00	18	19	51.35
RNFT2	0	genome.wustl.edu	37	12	117290182	117290183	+	RNA	INS	-	-	TTCCCC			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	117290182	117290183	-	TTCCCC	INS	RNFT2	ENST00000551251	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.014:0.009	-	-	-	no_errors	RNFT2	HGNC	ENSG00000135119	tier1			NA	NA	NA	NA	NA	NA
HYDIN	0	genome.wustl.edu	37	16	70874034	70874034	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	70874034	70874034	A	G	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	missense	c.12976	p.Y4326H	1.000	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	-	-	65	0	0.00	53	10	15.87
IREB2	0	genome.wustl.edu	37	15	78765615	78765615	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	78765615	78765615	G	T	SNP	IREB2	ENST00000258886	human	ensembl	74_37	+1	known	missense	c.915	p.M305I	1.000	pfam_Acoase/IPM_deHydtase_lsu_aba,superfamily_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	pfam_Acoase/IPM_deHydtase_lsu_aba,pfam_AconitaseA/IPMdHydase_ssu_swvl,superfamily_Acoase/IPM_deHydtase_lsu_aba,superfamily_Aconitase/3IPM_dehydase_swvl,prints_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	-	no_errors	IREB2	HGNC	ENSG00000136381	tier1	-	-	92	0	0.00	90	26	22.41
KCNMA1	0	genome.wustl.edu	37	10	78839238	78839238	+	Splice_Site	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	78839238	78839238	C	A	SNP	KCNMA1	ENST00000406533	human	ensembl	74_37	-1	known	splice_site	c.1593+1	e13+1	1.000	-	-	-	no_errors	KCNMA1	HGNC	ENSG00000156113	tier1	-	-	70	0	0.00	38	17	30.91
PIH1D3	0	genome.wustl.edu	37	X	106456221	106456221	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	106456221	106456221	T	A	SNP	PIH1D3	ENST00000336387	human	ensembl	74_37	+1	known	missense	c.116	p.L39H	0.025	NULL	pfam_PIH	-	no_errors	PIH1D3	HGNC	ENSG00000080572	tier1	-	-	79	0	0.00	5	102	95.33
ERC2	0	genome.wustl.edu	37	3	55545102	55545102	+	RNA	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	55545102	55545102	C	A	SNP	ERC2	ENST00000468118	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ERC2	HGNC	ENSG00000187672	tier1	-	-	36	0	0.00	17	13	43.33
SPHKAP	0	genome.wustl.edu	37	2	228881147	228881147	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	228881147	228881147	C	A	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	missense	c.4423	p.A1475S	0.026	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	tier1	-	-	28	0	0.00	15	20	57.14
OR1J2	0	genome.wustl.edu	37	9	125273283	125273283	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	125273283	125273283	T	C	SNP	OR1J2	ENST00000335302	human	ensembl	74_37	+1	known	missense	c.203	p.L68P	0.560	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1J2	HGNC	ENSG00000197233	tier1	-	-	160	0	0.00	129	38	22.75
ATG2A	0	genome.wustl.edu	37	11	64680562	64680562	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	64680562	64680562	T	A	SNP	ATG2A	ENST00000421419	human	ensembl	74_37	-1	known	missense	c.773	p.Y258F	1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2A	HGNC	ENSG00000110046	tier1	-	-	41	0	0.00	19	23	54.76
NALCN	0	genome.wustl.edu	37	13	101736125	101736125	+	Nonsense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	101736125	101736125	T	A	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	nonsense	c.3520	p.R1174*	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452	tier1	-	-	26	0	0.00	8	21	72.41
ZNF532	0	genome.wustl.edu	37	18	56587465	56587465	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	56587465	56587465	G	T	SNP	ZNF532	ENST00000336078	human	ensembl	74_37	+1	known	missense	c.1946	p.C649F	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF532	HGNC	ENSG00000074657	tier1	-	-	55	0	0.00	12	10	45.45
CDH23	0	genome.wustl.edu	37	10	73558298	73558298	+	Silent	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	73558298	73558298	G	A	SNP	CDH23	ENST00000398788	human	ensembl	74_37	+1	known	silent	c.297	p.V99	0.001	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736	tier1	-	-	30	0	0.00	17	9	34.62
ENSG00000204876	0	genome.wustl.edu	37	7	155755575	155755575	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	155755575	155755575	T	A	SNP	ENSG00000204876	ENST00000377722	human	ensembl	74_37	+1	putative	missense	c.52	p.L18M	0.002	NULL	NULL	-	no_errors	AC021218.2	Clone_based_vega_gene	ENSG00000204876	tier1	-	-	50	0	0.00	34	13	27.66
TUBB8	0	genome.wustl.edu	37	10	119972	119973	+	RNA	INS	-	-	GTGTCCCGGAGCTGCAGCAAGTCTCCTAGTCCTCACACCGGACGCGGCCCCAGGTGTCCCCAG			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	119972	119973	-	GTGTCCCGGAGCTGCAGCAAGTCTCCTAGTCCTCACACCGGACGCGGCCCCAGGTGTCCCCAG	INS	TUBB8	ENST00000413237	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	TUBB8	HGNC	ENSG00000173876	tier1			NA	NA	NA	NA	NA	NA
PROM2	0	genome.wustl.edu	37	2	95953212	95953212	+	Silent	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	95953212	95953212	G	A	SNP	PROM2	ENST00000317620	human	ensembl	74_37	+1	known	silent	c.2244	p.E748	1.000	pfam_Prominin	pfam_Prominin	-	no_errors	PROM2	HGNC	ENSG00000155066	tier1	-	-	41	0	0.00	42	29	40.85
CCDC93	0	genome.wustl.edu	37	2	118735569	118735569	+	Splice_Site	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	118735569	118735569	C	A	SNP	CCDC93	ENST00000376300	human	ensembl	74_37	-1	known	splice_site	c.657+1	e8+1	1.000	-	-	-	no_errors	CCDC93	HGNC	ENSG00000125633	tier1	-	-	46	0	0.00	34	7	16.67
CCDC40	0	genome.wustl.edu	37	17	78064150	78064209	+	Frame_Shift_Del	DEL	CGCGCGCAGGCACGTGCACGAACACAGGACACACACAGCACGTGCATGAACAACACAGGA	CGCGCGCAGGCACGTGCACGAACACAGGACACACACAGCACGTGCATGAACAACACAGGA	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	CGCGCGCAGGCACGTGCACGAACACAGGACACACACAGCACGTGCATGAACAACACAGGA	CGCGCGCAGGCACGTGCACGAACACAGGACACACACAGCACGTGCATGAACAACACAGGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	78064150	78064209	CGCGCGCAGGCACGTGCACGAACACAGGACACACACAGCACGTGCATGAACAACACAGGA	-	DEL	CCDC40	ENST00000374877	human	ensembl	74_37	+1	known	frame_shift_del	c.3045_3093	p.D1015fs	0.079:0.081:0.083:0.085:0.086:0.087:0.088:0.089:0.089:0.089:0.089:0.089:0.088:0.087:0.086:0.085:0.083:0.081:0.079:0.077:0.074:0.071:0.068:0.064:0.060:0.055:0.051:0.046:0.040:0.034:0.028:0.028:0.028:0.028:0.027:0.032:0.037:0.042:0.046:0.050:0.053:0.056:0.059:0.062:0.065:0.067:0.068:0.070:0.071	NULL	pfam_E3_ubiquit_lig_BRE1	-	no_errors	CCDC40	HGNC	ENSG00000141519	tier1			NA	NA	NA	NA	NA	NA
CILP	0	genome.wustl.edu	37	15	65500039	65500039	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	65500039	65500039	A	G	SNP	CILP	ENST00000261883	human	ensembl	74_37	-1	known	missense	c.125	p.I42T	0.000	NULL	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,superfamily_CarboxyPept-like_regulatory,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	CILP	HGNC	ENSG00000138615	tier1	-	-	76	0	0.00	42	37	46.84
CRYGD	0	genome.wustl.edu	37	2	208986467	208986467	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	208986467	208986467	C	A	SNP	CRYGD	ENST00000264376	human	ensembl	74_37	-1	known	missense	c.455	p.R152M	0.987	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYGD	HGNC	ENSG00000118231	tier1	-	-	24	0	0.00	8	9	52.94
KMT2D	0	genome.wustl.edu	37	12	49420474	49420474	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	49420474	49420474	C	T	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.15275	p.C5092Y	1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Znf_RING	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	40	0	0.00	24	12	33.33
HPCAL1	0	genome.wustl.edu	37	2	10560064	10560064	+	Missense_Mutation	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	10560064	10560064	G	C	SNP	HPCAL1	ENST00000307845	human	ensembl	74_37	+1	known	missense	c.181	p.A61P	1.000	pfscan_EF_hand_dom	pfam_EF_hand_dom,pfam_SPARC/Testican_Ca-bd-dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	HPCAL1	HGNC	ENSG00000115756	tier1	-	-	48	0	0.00	14	20	58.82
IGFBPL1	0	genome.wustl.edu	37	9	38414090	38414090	+	Splice_Site	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	38414090	38414090	C	A	SNP	IGFBPL1	ENST00000377694	human	ensembl	74_37	-1	known	splice_site	c.570+1	e2+1	1.000	-	-	-	no_errors	IGFBPL1	HGNC	ENSG00000137142	tier1	-	-	42	0	0.00	33	18	35.29
XPO6	0	genome.wustl.edu	37	16	28192319	28192319	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	28192319	28192319	T	A	SNP	XPO6	ENST00000304658	human	ensembl	74_37	-1	known	missense	c.37	p.S13C	1.000	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	XPO6	HGNC	ENSG00000169180	tier1	-	-	23	0	0.00	12	3	20.00
FLJ46361	0	genome.wustl.edu	37	10	124537345	124537345	+	RNA	SNP	T	T	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	124537345	124537345	T	G	SNP	FLJ46361	ENST00000439464	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.493	-	-	-	no_errors	RP11-318C4.2	Clone_based_vega_gene	ENSG00000176584	tier1	-	-	106	0	0.00	65	35	35.00
OTOG	0	genome.wustl.edu	37	11	17598145	17598145	+	Silent	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	17598145	17598145	C	A	SNP	OTOG	ENST00000399391	human	ensembl	74_37	+1	known	silent	c.2565	p.P855	0.947	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_AbfB,pfam_TIL_dom,superfamily_AbfB,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom	-	no_errors	OTOG	HGNC	ENSG00000188162	tier1	-	-	39	0	0.00	3	22	88.00
VGLL4	0	genome.wustl.edu	37	3	11712763	11712763	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	11712763	11712763	T	A	SNP	VGLL4	ENST00000404339	human	ensembl	74_37	-1	known	missense	c.52	p.S18C	0.001	NULL	smart_TDU_repeat	-	no_errors	VGLL4	HGNC	ENSG00000144560	tier1	-	-	39	0	0.00	15	35	70.00
XIRP2	0	genome.wustl.edu	37	2	167760400	167760400	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	167760400	167760400	G	T	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	missense	c.408	p.K136N	1.000	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092	tier1	-	-	38	0	0.00	14	12	46.15
IL17RD	0	genome.wustl.edu	37	3	57131730	57131730	+	Silent	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	57131730	57131730	C	G	SNP	IL17RD	ENST00000296318	human	ensembl	74_37	-1	known	silent	c.2001	p.S667	0.009	NULL	pfam_SEFIR,superfamily_TIR_dom	-	no_errors	IL17RD	HGNC	ENSG00000144730	tier1	-	-	52	0	0.00	21	28	57.14
PIK3C3	0	genome.wustl.edu	37	18	39575900	39575900	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	39575900	39575900	G	-	DEL	PIK3C3	ENST00000262039	human	ensembl	74_37	+1	known	frame_shift_del	c.833	p.R278fs	1.000	superfamily_ARM-type_fold,pirsf_PI3K_Vps34	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pirsf_PI3K_Vps34,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C3	HGNC	ENSG00000078142	tier1			68	0	0.00	33	21	38.89
TRIM42	0	genome.wustl.edu	37	3	140401346	140401346	+	Silent	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	140401346	140401346	G	T	SNP	TRIM42	ENST00000286349	human	ensembl	74_37	+1	known	silent	c.384	p.V128	0.000	NULL	pfam_Znf_B-box,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Znf_B-box,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM42	HGNC	ENSG00000155890	tier1	-	-	33	0	0.00	13	7	35.00
KIAA1217	0	genome.wustl.edu	37	10	24809182	24809182	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	24809182	24809182	G	T	SNP	KIAA1217	ENST00000376454	human	ensembl	74_37	+1	known	nonsense	c.2308	p.G770*	1.000	NULL	pfam_AIP3_C	-	no_errors	KIAA1217	HGNC	ENSG00000120549	tier1	-	-	91	0	0.00	56	36	39.13
COMMD2	0	genome.wustl.edu	37	3	149469257	149469257	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	149469257	149469257	C	T	SNP	COMMD2	ENST00000473414	human	ensembl	74_37	-1	known	missense	c.161	p.S54N	1.000	pfam_HCaRG	pfam_HCaRG	-	no_errors	COMMD2	HGNC	ENSG00000114744	tier1	-	-	48	0	0.00	18	13	41.94
TREML2	0	genome.wustl.edu	37	6	41166120	41166120	+	Missense_Mutation	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	41166120	41166120	C	G	SNP	TREML2	ENST00000483722	human	ensembl	74_37	-1	known	missense	c.103	p.E35Q	1.000	pfam_Ig_V-set,pfscan_Ig-like_dom	pfam_Ig_V-set,pfscan_Ig-like_dom	-	no_errors	TREML2	HGNC	ENSG00000112195	tier1	-	-	96	0	0.00	68	30	30.61
MUC16	0	genome.wustl.edu	37	19	9065730	9065730	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	9065730	9065730	T	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.21716	p.E7239V	0.001	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	75	0	0.00	53	33	38.37
C1orf111	0	genome.wustl.edu	37	1	162344181	162344181	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	162344181	162344181	G	T	SNP	C1orf111	ENST00000367935	human	ensembl	74_37	-1	known	missense	c.443	p.T148N	0.177	NULL	NULL	-	no_errors	C1orf111	HGNC	ENSG00000171722	tier1	-	-	75	0	0.00	82	65	44.22
EPSTI1	0	genome.wustl.edu	37	13	43469157	43469157	+	Silent	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	43469157	43469157	G	A	SNP	EPSTI1	ENST00000313640	human	ensembl	74_37	-1	known	silent	c.936	p.S312	0.002	NULL	NULL	-	no_errors	EPSTI1	HGNC	ENSG00000133106	tier1	rs1128105	-	44	0	0.00	45	6	11.76
FSTL4	0	genome.wustl.edu	37	5	132585261	132585261	+	Silent	SNP	A	A	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	132585261	132585261	A	C	SNP	FSTL4	ENST00000265342	human	ensembl	74_37	-1	known	silent	c.735	p.V245	0.927	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Kazal_dom,smart_Kazal_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_hand_dom,pfscan_Ig-like_dom	-	no_errors	FSTL4	HGNC	ENSG00000053108	tier1	-	-	14	0	0.00	7	10	58.82
KIAA1009	0	genome.wustl.edu	37	6	84883807	84883807	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	84883807	84883807	T	C	SNP	KIAA1009	ENST00000403245	human	ensembl	74_37	-1	known	missense	c.2126	p.E709G	1.000	NULL	NULL	-	no_errors	KIAA1009	HGNC	ENSG00000135315	tier1	-	-	88	0	0.00	44	61	58.10
FPGT-TNNI3K	0	genome.wustl.edu	37	1	74930379	74930379	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	74930379	74930379	A	G	SNP	FPGT-TNNI3K	ENST00000370899	human	ensembl	74_37	+1	novel	missense	c.2485	p.K829E	0.062	NULL	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	FPGT-TNNI3K	HGNC	ENSG00000259030	tier1	-	-	110	0	0.00	62	81	56.64
GPR158	0	genome.wustl.edu	37	10	25890447	25890447	+	RNA	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	25890447	25890447	C	A	SNP	GPR158	ENST00000490549	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.841	-	-	-	no_errors	GPR158	HGNC	ENSG00000151025	tier1	-	-	20	0	0.00	5	20	80.00
ZNF616	0	genome.wustl.edu	37	19	52619852	52619852	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	52619852	52619852	C	T	SNP	ZNF616	ENST00000600228	human	ensembl	74_37	-1	known	missense	c.565	p.E189K	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF616	HGNC	ENSG00000204611	tier1	-	-	102	0	0.00	59	17	22.37
PPP6R1	0	genome.wustl.edu	37	19	55748062	55748062	+	Missense_Mutation	SNP	T	T	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	55748062	55748062	T	G	SNP	PPP6R1	ENST00000412770	human	ensembl	74_37	-1	known	missense	c.1937	p.Q646P	1.000	superfamily_ARM-type_fold	pfam_SAPS,superfamily_ARM-type_fold	-	no_errors	PPP6R1	HGNC	ENSG00000105063	tier1	-	-	15	0	0.00	3	8	72.73
FAM179B	0	genome.wustl.edu	37	14	45481196	45481196	+	Missense_Mutation	SNP	A	A	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	45481196	45481196	A	C	SNP	FAM179B	ENST00000382233	human	ensembl	74_37	+1	known	missense	c.2923	p.I975L	0.997	NULL	superfamily_ARM-type_fold	-	no_errors	FAM179B	HGNC	ENSG00000198718	tier1	-	-	22	0	0.00	27	5	15.62
EIF4G1	0	genome.wustl.edu	37	3	184044418	184044418	+	Splice_Site	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	184044418	184044418	G	A	SNP	EIF4G1	ENST00000352767	human	ensembl	74_37	+1	known	splice_site	c.3346+1	e21+1	1.000	-	-	-	no_errors	EIF4G1	HGNC	ENSG00000114867	tier1	-	-	59	0	0.00	30	26	46.43
PKHD1L1	0	genome.wustl.edu	37	8	110442239	110442239	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	110442239	110442239	C	T	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	silent	c.3202	p.L1068	0.001	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038	tier1	-	-	71	0	0.00	139	16	10.32
CPAMD8	0	genome.wustl.edu	37	19	17038915	17038915	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	17038915	17038915	T	C	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	missense	c.3415	p.K1139E	1.000	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111	tier1	-	-	67	0	0.00	72	11	13.25
ZNF335	0	genome.wustl.edu	37	20	44592293	44592293	+	RNA	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	20	44592293	44592293	C	A	SNP	ZNF335	ENST00000475002	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	ZNF335	HGNC	ENSG00000198026	tier1	-	-	98	0	0.00	31	38	55.07
GALNT8	0	genome.wustl.edu	37	12	4853747	4853747	+	Silent	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	4853747	4853747	G	T	SNP	GALNT8	ENST00000252318	human	ensembl	74_37	+1	known	silent	c.741	p.L247	0.520	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT8	HGNC	ENSG00000130035	tier1	-	-	31	0	0.00	2	9	81.82
DNAH2	0	genome.wustl.edu	37	17	7661936	7661936	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	7661936	7661936	C	T	SNP	DNAH2	ENST00000389173	human	ensembl	74_37	+1	known	silent	c.2175	p.F725	0.963	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH2	HGNC	ENSG00000183914	tier1	-	-	41	0	0.00	4	17	80.95
LOC100293748	0	genome.wustl.edu	37	1	149250851	149250851	+	RNA	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	149250851	149250851	G	A	SNP	LOC100293748	ENST00000425624	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-403I13.4	Clone_based_vega_gene	ENSG00000223779	tier1	-	-	140	0	0.00	128	54	29.51
FOLH1B	0	genome.wustl.edu	37	11	89378316	89378316	+	RNA	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	89378316	89378316	C	T	SNP	FOLH1B	ENST00000531315	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.454	-	-	-	no_errors	FOLH1B	HGNC	ENSG00000134612	tier1	-	-	77	0	0.00	8	15	65.22
RYR1	0	genome.wustl.edu	37	19	38945991	38945991	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	38945991	38945991	T	A	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	missense	c.1557	p.N519K	1.000	pfam_Ca-rel_channel	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218	tier1	-	-	78	0	0.00	23	37	61.67
RBM25	0	genome.wustl.edu	37	14	73550231	73550231	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	73550231	73550231	A	T	SNP	RBM25	ENST00000261973	human	ensembl	74_37	+1	known	missense	c.354	p.R118S	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_PWI_dom,pfam_RRM_dom,superfamily_PWI_dom,smart_RRM_dom,smart_PWI_dom,pfscan_RRM_dom	-	no_errors	RBM25	HGNC	ENSG00000119707	tier1	-	-	69	0	0.00	59	19	24.36
EPHA1-AS1	0	genome.wustl.edu	37	7	143219678	143219678	+	RNA	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	143219678	143219678	G	A	SNP	EPHA1-AS1	ENST00000429289	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.114	-	-	-	no_errors	EPHA1-AS1	HGNC	ENSG00000229153	tier1	rs146890151	-	19	0	0.00	18	6	25.00
CUX1	0	genome.wustl.edu	37	7	101840130	101840130	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	101840130	101840130	T	-	DEL	CUX1	ENST00000360264	human	ensembl	74_37	+1	known	frame_shift_del	c.1472	p.L491fs	1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_LemA-like_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX1	HGNC	ENSG00000257923	tier1			47	0	0.00	36	10	21.74
SPEF1	0	genome.wustl.edu	37	20	3758940	3758940	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	20	3758940	3758940	C	T	SNP	SPEF1	ENST00000379756	human	ensembl	74_37	-1	known	silent	c.630	p.L210	1.000	NULL	pfam_DUF1042,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain	-	no_errors	SPEF1	HGNC	ENSG00000101222	tier1	-	-	46	0	0.00	27	39	59.09
SF3B1	0	genome.wustl.edu	37	2	198266155	198266155	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	198266155	198266155	C	T	SNP	SF3B1	ENST00000335508	human	ensembl	74_37	-1	known	missense	c.2465	p.R822K	1.000	superfamily_ARM-type_fold	pfam_SF3b_su1,superfamily_ARM-type_fold	-	no_errors	SF3B1	HGNC	ENSG00000115524	tier1	-	-	41	0	0.00	27	6	18.18
NAIP	0	genome.wustl.edu	37	5	70308188	70308188	+	Silent	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	70308188	70308188	G	T	SNP	NAIP	ENST00000194097	human	ensembl	74_37	-1	known	silent	c.555	p.G185	0.996	pfam_BIR,smart_BIR,pfscan_BIR	pfam_BIR,superfamily_P-loop_NTPase,smart_BIR,smart_AAA+_ATPase,pfscan_NACHT_NTPase,pfscan_BIR	-	no_errors	NAIP	HGNC	ENSG00000249437	tier1	-	-	42	0	0.00	27	19	41.30
ENSG00000243349	0	genome.wustl.edu	37	10	45648345	45648345	+	RNA	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	45648345	45648345	A	T	SNP	ENSG00000243349	ENST00000427229	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.253	-	-	-	no_errors	RP11-445N18.7	Clone_based_vega_gene	ENSG00000243349	tier1	-	-	53	0	0.00	24	29	54.72
KCNN4	0	genome.wustl.edu	37	19	44273144	44273144	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	44273144	44273144	G	T	SNP	KCNN4	ENST00000262888	human	ensembl	74_37	-1	known	missense	c.1090	p.Q364K	0.995	pfam_CaM-bd_dom,superfamily_CaM-bd_dom	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom	-	no_errors	KCNN4	HGNC	ENSG00000104783	tier1	-	-	61	0	0.00	19	31	62.00
LMOD3	0	genome.wustl.edu	37	3	69169079	69169079	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	69169079	69169079	T	C	SNP	LMOD3	ENST00000420581	human	ensembl	74_37	-1	known	missense	c.427	p.T143A	0.000	NULL	pfam_Tropomodulin	-	no_errors	LMOD3	HGNC	ENSG00000163380	tier1	-	-	131	0	0.00	80	24	23.08
RP1	0	genome.wustl.edu	37	8	55537267	55537267	+	Silent	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	55537267	55537267	T	A	SNP	RP1	ENST00000220676	human	ensembl	74_37	+1	known	silent	c.825	p.I275	1.000	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1	HGNC	ENSG00000104237	tier1	-	-	47	0	0.00	35	15	30.00
KCNJ1	0	genome.wustl.edu	37	11	128709220	128709220	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	128709220	128709220	C	A	SNP	KCNJ1	ENST00000392664	human	ensembl	74_37	-1	known	missense	c.976	p.A326S	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.1,prints_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.1,prints_K_chnl_inward-rec_Kir	-	no_errors	KCNJ1	HGNC	ENSG00000151704	tier1	-	-	45	0	0.00	0	17	100.00
HERC2P3	0	genome.wustl.edu	37	15	20643975	20643975	+	RNA	SNP	A	A	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	20643975	20643975	A	C	SNP	HERC2P3	ENST00000426501	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.961	-	-	-	no_errors	HERC2P3	HGNC	ENSG00000180229	tier1	-	-	72	0	0.00	40	35	46.67
PTGS1	0	genome.wustl.edu	37	9	125140226	125140226	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	125140226	125140226	G	T	SNP	PTGS1	ENST00000362012	human	ensembl	74_37	+1	known	missense	c.143	p.R48L	1.000	pfscan_EG-like_dom	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_EG-like_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	PTGS1	HGNC	ENSG00000095303	tier1	-	-	44	0	0.00	36	17	32.08
PRICKLE1	0	genome.wustl.edu	37	12	42858905	42858905	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	42858905	42858905	C	-	DEL	PRICKLE1	ENST00000345127	human	ensembl	74_37	-1	known	frame_shift_del	c.931	p.D311fs	1.000	NULL	pfam_PET_domain,pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	PRICKLE1	HGNC	ENSG00000139174	tier1			46	0	0.00	29	11	27.50
ECRP	0	genome.wustl.edu	37	14	21387910	21387910	+	RNA	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	21387910	21387910	G	C	SNP	ECRP	ENST00000258817	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.075	-	-	-	no_errors	RP11-84C10.2	Clone_based_vega_gene	ENSG00000136315	tier1	-	-	71	0	0.00	44	19	30.16
AKT3	0	genome.wustl.edu	37	1	243859016	243859016	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	243859016	243859016	C	T	SNP	AKT3	ENST00000263826	human	ensembl	74_37	-1	known	missense	c.49	p.E17K	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom	-	no_errors	AKT3	HGNC	ENSG00000117020	tier1	-	-	50	0	0.00	24	53	68.83
HRH3	0	genome.wustl.edu	37	20	60791968	60791968	+	Silent	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	20	60791968	60791968	G	T	SNP	HRH3	ENST00000317393	human	ensembl	74_37	-1	known	silent	c.432	p.A144	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Histamine_H3_rcpt,prints_GPCR_Rhodpsn,prints_Musac_Ach_rcpt	-	no_errors	HRH3	HGNC	ENSG00000101180	tier1	-	-	19	0	0.00	6	23	79.31
EMR1	0	genome.wustl.edu	37	19	6904102	6904102	+	Silent	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	6904102	6904102	C	A	SNP	EMR1	ENST00000312053	human	ensembl	74_37	+1	known	silent	c.858	p.T286	0.998	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_GPCR_2_secretin-like,pfam_EGF-like_Ca-bd_dom,pfam_GPS_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_EMR1_rcpt,prints_GPCR_2_secretin-like	-	no_errors	EMR1	HGNC	ENSG00000174837	tier1	-	-	59	0	0.00	27	22	44.90
SEMA6B	0	genome.wustl.edu	37	19	4548338	4548338	+	Missense_Mutation	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	4548338	4548338	C	G	SNP	SEMA6B	ENST00000301293	human	ensembl	74_37	-1	known	missense	c.1391	p.S464T	0.582	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,pfscan_Semap_dom	-	no_errors	SEMA6B	HGNC	ENSG00000167680	tier1	-	-	60	0	0.00	30	34	53.12
BLOC1S6	0	genome.wustl.edu	37	15	45898642	45898642	+	Missense_Mutation	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	45898642	45898642	G	C	SNP	BLOC1S6	ENST00000220531	human	ensembl	74_37	+1	known	missense	c.449	p.R150T	1.000	pirsf_BLOC-1_pallidin	pirsf_BLOC-1_pallidin	-	no_errors	BLOC1S6	HGNC	ENSG00000104164	tier1	-	-	39	0	0.00	28	20	41.67
RIOK1	0	genome.wustl.edu	37	6	7395304	7395304	+	Missense_Mutation	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	7395304	7395304	G	C	SNP	RIOK1	ENST00000379834	human	ensembl	74_37	+1	known	missense	c.295	p.D99H	0.000	pirsf_Ser/Thr_kinase_Rio1	pfam_RIO-like_kinase,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_RIO_kinase,pirsf_Ser/Thr_kinase_Rio1	-	no_errors	RIOK1	HGNC	ENSG00000124784	tier1	-	-	26	0	0.00	14	15	51.72
P2RY6	0	genome.wustl.edu	37	11	73007975	73007975	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	73007975	73007975	C	A	SNP	P2RY6	ENST00000349767	human	ensembl	74_37	+1	known	missense	c.412	p.R138S	0.651	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_P2Y3_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_P2Y6_rcpt,prints_GPCR_Rhodpsn,prints_P2Y3_rcpt,prints_Protea_act_rcpt	-	no_errors	P2RY6	HGNC	ENSG00000171631	tier1	-	-	53	0	0.00	5	14	73.68
DDB1	0	genome.wustl.edu	37	11	61081151	61081151	+	Missense_Mutation	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	61081151	61081151	G	C	SNP	DDB1	ENST00000301764	human	ensembl	74_37	-1	known	missense	c.1889	p.T630S	1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	DDB1	HGNC	ENSG00000167986	tier1	-	-	44	0	0.00	42	13	23.64
DVL3	0	genome.wustl.edu	37	3	183887823	183887823	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	183887823	183887823	G	T	SNP	DVL3	ENST00000313143	human	ensembl	74_37	+1	known	missense	c.1528	p.D510Y	1.000	pfam_Dishevelled_C-dom	pfam_Dishevelled_C-dom,pfam_DIX,pfam_Dishevelled_protein_dom,pfam_PDZ,pfam_DEP_dom,superfamily_PDZ,smart_DIX,smart_PDZ,smart_DEP_dom,pfscan_DEP_dom,pfscan_DIX,pfscan_PDZ,prints_Dishevelled_fam,prints_Dishevelled_3	-	no_errors	DVL3	HGNC	ENSG00000161202	tier1	-	-	20	0	0.00	9	9	50.00
SUMO3	0	genome.wustl.edu	37	21	46225701	46225701	+	RNA	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	21	46225701	46225701	C	T	SNP	SUMO3	ENST00000479153	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	SUMO3	HGNC	ENSG00000184900	tier1	-	-	21	0	0.00	11	12	52.17
ANO4	0	genome.wustl.edu	37	12	101480488	101480488	+	Silent	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	101480488	101480488	G	T	SNP	ANO4	ENST00000392977	human	ensembl	74_37	+1	known	silent	c.1587	p.V529	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO4	HGNC	ENSG00000151572	tier1	-	-	113	0	0.00	67	62	48.06
MESP2	0	genome.wustl.edu	37	15	90320123	90320158	+	In_Frame_Del	DEL	GGGCAGGGGCAAGGGCAGGGGCAGGGGCAGGGGCAA	GGGCAGGGGCAAGGGCAGGGGCAGGGGCAGGGGCAA	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	GGGCAGGGGCAAGGGCAGGGGCAGGGGCAGGGGCAA	GGGCAGGGGCAAGGGCAGGGGCAGGGGCAGGGGCAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	90320123	90320158	GGGCAGGGGCAAGGGCAGGGGCAGGGGCAGGGGCAA	-	DEL	MESP2	ENST00000341735	human	ensembl	74_37	+1	known	in_frame_del	c.535_570	p.QGQGQGQGQGQG182in_frame_del	0.000:0.000:0.000:0.000:0.001:0.001:0.001:0.000:0.000:0.000:0.000:0.000:0.011:0.012:0.038:0.072:0.086:0.084:0.039:0.015:0.014:0.010:0.001:0.000:0.000:0.001:0.002:0.030:0.012:0.012:0.013:0.012:0.010:0.010:0.006:0.007	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MESP2	HGNC	ENSG00000188095	tier1			NA	NA	NA	NA	NA	NA
CDK19	0	genome.wustl.edu	37	6	110953324	110953324	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	110953324	110953324	C	A	SNP	CDK19	ENST00000368911	human	ensembl	74_37	-1	known	missense	c.555	p.K185N	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK19	HGNC	ENSG00000155111	tier1	-	-	41	0	0.00	20	20	50.00
ZNF326	0	genome.wustl.edu	37	1	90484253	90484253	+	Missense_Mutation	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	90484253	90484253	G	C	SNP	ZNF326	ENST00000340281	human	ensembl	74_37	+1	known	missense	c.1084	p.V362L	1.000	pfam_AKAP95	pfam_AKAP95	-	no_errors	ZNF326	HGNC	ENSG00000162664	tier1	-	-	47	0	0.00	31	11	26.19
MUC17	0	genome.wustl.edu	37	7	100685306	100685306	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	100685306	100685306	C	A	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.10609	p.L3537I	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876	tier1	-	-	116	1	0.85	46	65	58.56
TLE4	0	genome.wustl.edu	37	9	82267610	82267610	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	82267610	82267610	A	T	SNP	TLE4	ENST00000376520	human	ensembl	74_37	+1	known	missense	c.493	p.S165C	0.985	NULL	pfam_Groucho/TLE_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Groucho_enhance	-	no_errors	TLE4	HGNC	ENSG00000106829	tier1	-	-	21	0	0.00	13	22	62.86
IRG1	0	genome.wustl.edu	37	13	77527762	77527762	+	Missense_Mutation	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	77527762	77527762	G	C	SNP	IRG1	ENST00000377462	human	ensembl	74_37	+1	known	missense	c.202	p.V68L	0.996	pfam_MmgE_PrpD,superfamily_MmgE_PrpD	pfam_MmgE_PrpD,superfamily_MmgE_PrpD	-	no_errors	IRG1	HGNC	ENSG00000102794	tier1	-	-	102	1	0.97	78	29	27.10
CCL24	0	genome.wustl.edu	37	7	75442704	75442704	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	75442704	75442704	A	T	SNP	CCL24	ENST00000222902	human	ensembl	74_37	-1	known	missense	c.111	p.F37L	0.075	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL24	HGNC	ENSG00000106178	tier1	-	-	29	0	0.00	26	6	18.75
CRISPLD1	0	genome.wustl.edu	37	8	75926309	75926309	+	Missense_Mutation	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	75926309	75926309	G	C	SNP	CRISPLD1	ENST00000262207	human	ensembl	74_37	+1	known	missense	c.598	p.V200L	1.000	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1	pfam_LCCL,pfam_CAP_domain,superfamily_CAP_domain,superfamily_LCCL,smart_Allrgn_V5/Tpx1,smart_LCCL,pfscan_LCCL,prints_Allrgn_V5/Tpx1	-	no_errors	CRISPLD1	HGNC	ENSG00000121005	tier1	-	-	47	0	0.00	58	38	39.58
CBX7	0	genome.wustl.edu	37	22	39530572	39530572	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	22	39530572	39530572	C	T	SNP	CBX7	ENST00000216133	human	ensembl	74_37	-1	known	silent	c.432	p.K144	1.000	NULL	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow,prints_Chromo_dom_subgr	-	no_errors	CBX7	HGNC	ENSG00000100307	tier1	-	-	28	0	0.00	9	25	73.53
DSCR4	0	genome.wustl.edu	37	21	39427067	39427067	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	21	39427067	39427067	T	A	SNP	DSCR4	ENST00000328264	human	ensembl	74_37	-1	known	missense	c.239	p.E80V	0.000	NULL	NULL	-	no_errors	DSCR4	HGNC	ENSG00000184029	tier1	-	-	68	0	0.00	41	25	37.88
HLTF	0	genome.wustl.edu	37	3	148792099	148792099	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	148792099	148792099	C	A	SNP	HLTF	ENST00000310053	human	ensembl	74_37	-1	known	missense	c.432	p.M144I	1.000	pfam_HIP116_Rad5p_N,smart_HIP116_Rad5p_N	pfam_SNF2_N,pfam_HIP116_Rad5p_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_HIP116_Rad5p_N,smart_Helicase_ATP-bd,smart_Znf_RING,smart_Helicase_C,pfscan_Znf_RING,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	HLTF	HGNC	ENSG00000071794	tier1	-	-	28	0	0.00	15	10	40.00
ENSG00000215765	0	genome.wustl.edu	37	19	55301535	55301535	+	RNA	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	55301535	55301535	G	A	SNP	ENSG00000215765	ENST00000400864	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.020	-	-	-	no_errors	CTB-61M7.1	Clone_based_vega_gene	ENSG00000215765	tier1	-	-	93	0	0.00	47	24	33.80
CHRNA2	0	genome.wustl.edu	37	8	27320588	27320588	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	27320588	27320588	C	A	SNP	CHRNA2	ENST00000407991	human	ensembl	74_37	-1	known	missense	c.1372	p.G458C	0.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA2	HGNC	ENSG00000120903	tier1	-	-	40	0	0.00	13	14	51.85
KLHL28	0	genome.wustl.edu	37	14	45398326	45398326	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	45398326	45398326	T	A	SNP	KLHL28	ENST00000396128	human	ensembl	74_37	-1	known	missense	c.1621	p.N541Y	1.000	pfam_Kelch_1,pfam_Kelch_2,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL28	HGNC	ENSG00000179454	tier1	-	-	17	0	0.00	10	8	44.44
LY6G6F	0	genome.wustl.edu	37	6	31677862	31677862	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	31677862	31677862	A	G	SNP	LY6G6F	ENST00000556581	human	ensembl	74_37	+1	known	missense	c.706	p.I236V	0.999	NULL	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	LY6G6F	HGNC	ENSG00000204424	tier1	-	-	46	0	0.00	21	33	61.11
MTMR11	0	genome.wustl.edu	37	1	149902583	149902583	+	RNA	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	149902583	149902583	C	A	SNP	MTMR11	ENST00000492824	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MTMR11	HGNC	ENSG00000014914	tier1	-	-	27	0	0.00	27	18	40.00
ALOX12P2	0	genome.wustl.edu	37	17	6802783	6802783	+	RNA	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	6802783	6802783	C	A	SNP	ALOX12P2	ENST00000570890	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	ALOX12P2	HGNC	ENSG00000262943	tier1	-	-	36	0	0.00	2	24	92.31
SOGA2	0	genome.wustl.edu	37	18	8784116	8784116	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	8784116	8784116	G	T	SNP	SOGA2	ENST00000359865	human	ensembl	74_37	+1	known	nonsense	c.1006	p.E336*	1.000	pfam_SOGA	pfam_SOGA	-	no_errors	SOGA2	HGNC	ENSG00000168502	tier1	-	-	49	0	0.00	32	25	43.86
AP3B1	0	genome.wustl.edu	37	5	77524016	77524016	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	77524016	77524016	C	A	SNP	AP3B1	ENST00000255194	human	ensembl	74_37	-1	known	missense	c.327	p.Q109H	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_beta	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_beta	-	no_errors	AP3B1	HGNC	ENSG00000132842	tier1	-	-	53	0	0.00	17	22	56.41
SLC7A10	0	genome.wustl.edu	37	19	33702136	33702136	+	Silent	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	33702136	33702136	G	A	SNP	SLC7A10	ENST00000253188	human	ensembl	74_37	-1	known	silent	c.1011	p.Y337	0.995	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A10	HGNC	ENSG00000130876	tier1	-	-	37	0	0.00	34	16	32.00
SMCHD1	0	genome.wustl.edu	37	18	2778165	2778165	+	Splice_Site	SNP	A	A	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	2778165	2778165	A	C	SNP	SMCHD1	ENST00000320876	human	ensembl	74_37	+1	known	splice_site	c.5477-2	e44-2	1.000	-	-	-	no_errors	SMCHD1	HGNC	ENSG00000101596	tier1	-	-	57	0	0.00	19	25	56.82
ATP6V1H	0	genome.wustl.edu	37	8	54628321	54628321	+	RNA	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	54628321	54628321	T	A	SNP	ATP6V1H	ENST00000523899	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ATP6V1H	HGNC	ENSG00000047249	tier1	-	-	58	0	0.00	37	23	38.33
UGT1A1	0	genome.wustl.edu	37	2	234526727	234526727	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	234526727	234526727	G	A	SNP	UGT1A1	ENST00000373450	human	ensembl	74_37	+1	known	missense	c.374	p.R125K	0.346	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A1	HGNC	ENSG00000241635	tier1	-	-	104	1	0.95	9	19	67.86
ZNF107	0	genome.wustl.edu	37	7	64166752	64166752	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	64166752	64166752	G	T	SNP	ZNF107	ENST00000344930	human	ensembl	74_37	+1	known	missense	c.70	p.D24Y	0.854	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF107	HGNC	ENSG00000196247	tier1	-	-	35	0	0.00	30	16	34.78
ZFHX4	0	genome.wustl.edu	37	8	77776313	77776313	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	77776313	77776313	G	T	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.10363	p.A3455S	1.000	smart_Znf_U1,smart_Znf_C2H2-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	51	0	0.00	31	63	67.02
PPRC1	0	genome.wustl.edu	37	10	103906642	103906642	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	103906642	103906642	A	T	SNP	PPRC1	ENST00000278070	human	ensembl	74_37	+1	known	missense	c.3893	p.Y1298F	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	PPRC1	HGNC	ENSG00000148840	tier1	-	-	30	0	0.00	4	13	76.47
RWDD4	0	genome.wustl.edu	37	4	184570627	184570627	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	184570627	184570627	T	A	SNP	RWDD4	ENST00000326397	human	ensembl	74_37	-1	known	missense	c.458	p.K153M	1.000	NULL	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,pfscan_RWD-domain	-	no_errors	RWDD4	HGNC	ENSG00000182552	tier1	-	-	86	0	0.00	31	67	68.37
MRPL1	0	genome.wustl.edu	37	4	78830425	78830425	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	78830425	78830425	A	T	SNP	MRPL1	ENST00000315567	human	ensembl	74_37	+1	known	missense	c.676	p.I226F	0.989	pfam_Ribosomal_L1/biogenesis,superfamily_Ribosomal_L1-like,tigrfam_Ribosomal_L1_mit	pfam_Ribosomal_L1/biogenesis,superfamily_Ribosomal_L1-like,tigrfam_Ribosomal_L1_mit	-	no_errors	MRPL1	HGNC	ENSG00000169288	tier1	-	-	38	0	0.00	22	26	54.17
IL13RA2	0	genome.wustl.edu	37	X	114245364	114245364	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	114245364	114245364	C	A	SNP	IL13RA2	ENST00000243213	human	ensembl	74_37	-1	known	missense	c.549	p.Q183H	0.054	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	-	no_errors	IL13RA2	HGNC	ENSG00000123496	tier1	-	-	30	0	0.00	2	7	77.78
MSH2	0	genome.wustl.edu	37	2	47635632	47635632	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	47635632	47635632	G	A	SNP	MSH2	ENST00000233146	human	ensembl	74_37	+1	known	missense	c.304	p.V102I	1.000	pfam_DNA_mismatch_repair_MutS-lik_N,pirsf_DNA_mismatch_repair_MSH2	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C,pirsf_DNA_mismatch_repair_MSH2	-	no_errors	MSH2	HGNC	ENSG00000095002	tier1	rs193922373	-	38	0	0.00	24	16	40.00
PABPC3	0	genome.wustl.edu	37	13	25670800	25670800	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	25670800	25670800	T	C	SNP	PABPC3	ENST00000281589	human	ensembl	74_37	+1	known	missense	c.464	p.I155T	1.000	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,pfam_PABP_HYD,superfamily_PABP_HYD,smart_RRM_dom,smart_RRM_dom_euk,smart_PABP_HYD,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC3	HGNC	ENSG00000151846	tier1	-	-	46	0	0.00	27	13	32.50
ITGA1	0	genome.wustl.edu	37	5	52235739	52235739	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	52235739	52235739	G	A	SNP	ITGA1	ENST00000282588	human	ensembl	74_37	+1	known	missense	c.3250	p.V1084I	0.504	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA1	HGNC	ENSG00000213949	tier1	-	-	31	0	0.00	32	10	23.81
SNORD114-14	0	genome.wustl.edu	37	14	101438463	101438463	+	RNA	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	101438463	101438463	G	T	SNP	SNORD114-14	ENST00000362723	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	SNORD114-14	HGNC	ENSG00000199593	tier1	-	-	65	0	0.00	43	24	35.82
RANBP2	0	genome.wustl.edu	37	2	109399233	109399233	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	109399233	109399233	A	T	SNP	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	missense	c.9284	p.N3095I	1.000	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201	tier1	-	-	64	0	0.00	28	9	24.32
CCDC50	0	genome.wustl.edu	37	3	191092882	191092882	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	191092882	191092882	G	T	SNP	CCDC50	ENST00000392456	human	ensembl	74_37	+1	known	missense	c.480	p.L160F	1.000	NULL	NULL	-	no_errors	CCDC50	HGNC	ENSG00000152492	tier1	-	-	17	0	0.00	3	7	70.00
IRX1	0	genome.wustl.edu	37	5	3601121	3601121	+	Silent	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	3601121	3601121	G	T	SNP	IRX1	ENST00000302006	human	ensembl	74_37	+1	known	silent	c.1410	p.T470	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX1	HGNC	ENSG00000170549	tier1	-	-	40	0	0.00	17	10	35.71
KCNJ2	0	genome.wustl.edu	37	17	68171558	68171558	+	Silent	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	68171558	68171558	C	A	SNP	KCNJ2	ENST00000243457	human	ensembl	74_37	+1	known	silent	c.378	p.V126	0.991	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.1	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.1	-	no_errors	KCNJ2	HGNC	ENSG00000123700	tier1	-	-	135	0	0.00	52	48	48.00
ITGAL	0	genome.wustl.edu	37	16	30529995	30529995	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	30529995	30529995	C	A	SNP	ITGAL	ENST00000356798	human	ensembl	74_37	+1	known	missense	c.3183	p.S1061R	1.000	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGAL	HGNC	ENSG00000005844	tier1	-	-	69	0	0.00	40	10	20.00
POU3F2	0	genome.wustl.edu	37	6	99282817	99282817	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	99282817	99282817	C	A	SNP	POU3F2	ENST00000328345	human	ensembl	74_37	+1	known	missense	c.68	p.P23Q	1.000	pirsf_Transcription_factor_POU	pirsf_Transcription_factor_POU,pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F2	HGNC	ENSG00000184486	tier1	-	-	26	0	0.00	14	14	50.00
BUD13	0	genome.wustl.edu	37	11	116629884	116629884	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	116629884	116629884	C	T	SNP	BUD13	ENST00000260210	human	ensembl	74_37	-1	known	missense	c.1266	p.M422I	1.000	NULL	pfam_Bud13	-	no_errors	BUD13	HGNC	ENSG00000137656	tier1	-	-	76	0	0.00	9	26	74.29
LRFN2	0	genome.wustl.edu	37	6	40399996	40399996	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	40399996	40399996	C	T	SNP	LRFN2	ENST00000338305	human	ensembl	74_37	-1	known	missense	c.857	p.C286Y	1.000	smart_Cys-rich_flank_reg_C	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN2	HGNC	ENSG00000156564	tier1	-	-	75	0	0.00	49	26	34.67
COBL	0	genome.wustl.edu	37	7	51096111	51096111	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	51096111	51096111	C	A	SNP	COBL	ENST00000395542	human	ensembl	74_37	-1	known	missense	c.2928	p.K976N	0.000	NULL	pfam_Cordon-bleu_ubiquitin_domain,pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	COBL	HGNC	ENSG00000106078	tier1	-	-	73	0	0.00	14	31	68.89
ENSG00000266999	0	genome.wustl.edu	37	17	34236784	34236784	+	RNA	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	34236784	34236784	G	A	SNP	ENSG00000266999	ENST00000587132	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	AC015849.16	Clone_based_vega_gene	ENSG00000266999	tier1	-	-	24	0	0.00	9	6	40.00
SS18	0	genome.wustl.edu	37	18	23619267	23619267	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	23619267	23619267	C	T	SNP	SS18	ENST00000415083	human	ensembl	74_37	-1	known	missense	c.761	p.R254K	1.000	NULL	pfam_SS18_fam	-	no_errors	SS18	HGNC	ENSG00000141380	tier1	-	-	46	0	0.00	37	15	28.85
WDR64	0	genome.wustl.edu	37	1	241938479	241938479	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	241938479	241938479	T	A	SNP	WDR64	ENST00000366552	human	ensembl	74_37	+1	known	missense	c.2473	p.S825T	0.002	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR64	HGNC	ENSG00000162843	tier1	-	-	50	0	0.00	102	16	13.56
RASGRF1	0	genome.wustl.edu	37	15	79310229	79310229	+	Silent	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	79310229	79310229	G	A	SNP	RASGRF1	ENST00000419573	human	ensembl	74_37	-1	known	silent	c.1626	p.D542	0.665	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_Ras_GEF_dom,superfamily_DH-domain,smart_Pleckstrin_homology,smart_DH-domain,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRF1	HGNC	ENSG00000058335	tier1	-	-	49	0	0.00	36	28	43.75
HSP90AB1	0	genome.wustl.edu	37	6	44219501	44219501	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	44219501	44219501	C	T	SNP	HSP90AB1	ENST00000353801	human	ensembl	74_37	+1	known	missense	c.1342	p.R448C	1.000	pfam_Hsp90_fam,superfamily_Ribosomal_S5_D2-typ_fold,pirsf_Hsp90_fam	pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pirsf_Hsp90_fam,prints_Hsp90_N	-	no_errors	HSP90AB1	HGNC	ENSG00000096384	tier1	-	-	49	0	0.00	63	14	18.18
F2RL1	0	genome.wustl.edu	37	5	76128973	76128973	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	76128973	76128973	A	G	SNP	F2RL1	ENST00000296677	human	ensembl	74_37	+1	known	missense	c.541	p.M181V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,prints_Pro_rcpt_2,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,prints_Pro_rcpt_2,prints_Protea_act_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	F2RL1	HGNC	ENSG00000164251	tier1	-	-	44	0	0.00	14	32	69.57
PRR23B	0	genome.wustl.edu	37	3	138739129	138739129	+	Silent	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	138739129	138739129	G	A	SNP	PRR23B	ENST00000329447	human	ensembl	74_37	-1	known	silent	c.375	p.D125	0.002	pfam_UPF0572	pfam_UPF0572	-	no_errors	PRR23B	HGNC	ENSG00000184814	tier1	-	-	41	0	0.00	20	14	41.18
CSMD2	0	genome.wustl.edu	37	1	34181969	34181969	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	34181969	34181969	C	T	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	missense	c.3134	p.G1045E	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	tier1	-	-	49	0	0.00	24	17	41.46
DRGX	0	genome.wustl.edu	37	10	50574381	50574381	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	50574381	50574381	G	T	SNP	DRGX	ENST00000434016	human	ensembl	74_37	-1	known	missense	c.587	p.S196Y	1.000	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	DRGX	HGNC	ENSG00000165606	tier1	-	-	80	0	0.00	41	4	8.89
LIN9	0	genome.wustl.edu	37	1	226483640	226483640	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	226483640	226483640	C	A	SNP	LIN9	ENST00000328205	human	ensembl	74_37	-1	known	missense	c.215	p.R72I	1.000	NULL	pfam_LIN-9/ALY1	-	no_errors	LIN9	HGNC	ENSG00000183814	tier1	-	-	30	0	0.00	49	13	20.97
NALCN	0	genome.wustl.edu	37	13	101727014	101727014	+	Splice_Site	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	101727014	101727014	C	A	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	splice_site	c.3955-1	e35-1	1.000	-	-	-	no_errors	NALCN	HGNC	ENSG00000102452	tier1	-	-	13	0	0.00	15	8	34.78
CHD7	0	genome.wustl.edu	37	8	61714145	61714145	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	61714145	61714145	A	T	SNP	CHD7	ENST00000423902	human	ensembl	74_37	+1	known	missense	c.2435	p.K812I	1.000	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD7	HGNC	ENSG00000171316	tier1	-	-	37	0	0.00	31	5	13.89
CWH43	0	genome.wustl.edu	37	4	49032922	49032922	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	49032922	49032922	G	T	SNP	CWH43	ENST00000226432	human	ensembl	74_37	+1	known	nonsense	c.1453	p.E485*	1.000	superfamily_Endo/exonuclease/phosphatase	superfamily_Endo/exonuclease/phosphatase	-	no_errors	CWH43	HGNC	ENSG00000109182	tier1	-	-	66	0	0.00	65	20	23.53
GUCA1C	0	genome.wustl.edu	37	3	108672405	108672405	+	Splice_Site	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	108672405	108672405	C	A	SNP	GUCA1C	ENST00000261047	human	ensembl	74_37	-1	known	splice_site	c.204+1	e1+1	1.000	-	-	-	no_errors	GUCA1C	HGNC	ENSG00000138472	tier1	-	-	51	0	0.00	31	24	43.64
UHRF2	0	genome.wustl.edu	37	9	6482077	6482077	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	6482077	6482077	C	T	SNP	UHRF2	ENST00000276893	human	ensembl	74_37	+1	known	missense	c.1370	p.S457L	1.000	pfam_SRA_YDG,smart_SRA_YDG,pfscan_SRA_YDG	pfam_SRA_YDG,pfam_DUF3590,pfam_Ubiquitin_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Ubiquitin_dom,smart_Znf_PHD,smart_Znf_RING,smart_SRA_YDG,pfscan_SRA_YDG,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_Ubiquitin_supergroup	-	no_errors	UHRF2	HGNC	ENSG00000147854	tier1	-	-	50	0	0.00	46	17	26.98
ERO1L	0	genome.wustl.edu	37	14	53124676	53124676	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	53124676	53124676	G	A	SNP	ERO1L	ENST00000395686	human	ensembl	74_37	-1	known	missense	c.767	p.A256V	1.000	pfam_Ero1,pirsf_Ero1	pfam_Ero1,pirsf_Ero1	-	no_errors	ERO1L	HGNC	ENSG00000197930	tier1	-	-	49	0	0.00	26	9	25.71
IRX4	0	genome.wustl.edu	37	5	1881119	1881119	+	RNA	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	1881119	1881119	C	A	SNP	IRX4	ENST00000505938	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IRX4	HGNC	ENSG00000113430	tier1	-	-	34	0	0.00	21	11	34.38
BCR	0	genome.wustl.edu	37	22	23658570	23658570	+	RNA	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	22	23658570	23658570	G	A	SNP	BCR	ENST00000436990	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	BCR	HGNC	ENSG00000186716	tier1	-	-	17	0	0.00	3	7	70.00
CNTLN	0	genome.wustl.edu	37	9	17143330	17143330	+	Silent	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	17143330	17143330	T	A	SNP	CNTLN	ENST00000380647	human	ensembl	74_37	+1	known	silent	c.405	p.V135	0.990	NULL	superfamily_Prefoldin	-	no_errors	CNTLN	HGNC	ENSG00000044459	tier1	-	-	59	0	0.00	32	38	54.29
DNAH7	0	genome.wustl.edu	37	2	196786855	196786855	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	196786855	196786855	A	T	SNP	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	missense	c.3892	p.S1298T	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997	tier1	-	-	84	0	0.00	38	15	28.30
LYN	0	genome.wustl.edu	37	8	56860200	56860200	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	56860200	56860200	G	T	SNP	LYN	ENST00000519728	human	ensembl	74_37	+1	known	missense	c.202	p.V68L	0.999	superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	LYN	HGNC	ENSG00000254087	tier1	-	-	54	0	0.00	24	23	48.94
FJX1	0	genome.wustl.edu	37	11	35641955	35641955	+	RNA	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	35641955	35641955	A	T	SNP	FJX1	ENST00000532914	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.676	-	-	-	no_errors	FJX1	HGNC	ENSG00000179431	tier1	-	-	27	0	0.00	5	15	75.00
NLRC4	0	genome.wustl.edu	37	2	32449618	32449618	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	32449618	32449618	G	T	SNP	NLRC4	ENST00000360906	human	ensembl	74_37	-1	known	missense	c.2999	p.A1000D	0.004	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NLRC4	HGNC	ENSG00000091106	tier1	-	-	35	0	0.00	10	18	64.29
DOCK3	0	genome.wustl.edu	37	3	51101878	51101878	+	Splice_Site	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	51101878	51101878	G	T	SNP	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	splice_site	c.316-1	e6-1	1.000	-	-	-	no_errors	DOCK3	HGNC	ENSG00000088538	tier1	-	-	29	0	0.00	13	12	48.00
MUC4	0	genome.wustl.edu	37	3	195514814	195514814	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	195514814	195514814	G	T	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.3637	p.H1213N	0.955	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	-	-	45	0	0.00	30	6	16.67
TM4SF4	0	genome.wustl.edu	37	3	149193660	149193660	+	Nonsense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	149193660	149193660	T	A	SNP	TM4SF4	ENST00000305354	human	ensembl	74_37	+1	known	nonsense	c.225	p.C75*	0.999	pfam_L6_membrane	pfam_L6_membrane	-	no_errors	TM4SF4	HGNC	ENSG00000169903	tier1	-	-	107	0	0.00	62	45	42.06
ENSG00000231345	0	genome.wustl.edu	37	10	52418913	52418913	+	RNA	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	52418913	52418913	A	T	SNP	ENSG00000231345	ENST00000449695	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.951	-	-	-	no_errors	RP11-564C4.6	Clone_based_vega_gene	ENSG00000231345	tier1	-	-	29	0	0.00	15	3	16.67
DBI	0	genome.wustl.edu	37	2	120125508	120125508	+	Splice_Site	DEL	G	G	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	120125508	120125508	G	-	DEL	DBI	ENST00000393103	human	ensembl	74_37	+1	putative	splice_site_del	c.12+1	e1+1	0.000	-	-	-	no_errors	DBI	HGNC	ENSG00000155368	tier1			108	0	0.00	71	24	25.26
CLCC1	0	genome.wustl.edu	37	1	109492517	109492517	+	Missense_Mutation	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	109492517	109492517	C	G	SNP	CLCC1	ENST00000356970	human	ensembl	74_37	-1	known	missense	c.156	p.K52N	0.660	pfam_Chloride_chnl_CLIC-like	pfam_Chloride_chnl_CLIC-like	-	no_errors	CLCC1	HGNC	ENSG00000121940	tier1	-	-	52	0	0.00	39	13	25.00
LRRC18	0	genome.wustl.edu	37	10	50121548	50121548	+	Missense_Mutation	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	50121548	50121548	C	G	SNP	LRRC18	ENST00000374160	human	ensembl	74_37	-1	known	missense	c.653	p.R218P	0.974	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC18	HGNC	ENSG00000165383	tier1	-	-	88	0	0.00	59	17	22.37
PGM5P2	0	genome.wustl.edu	37	9	69147686	69147686	+	RNA	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	69147686	69147686	C	T	SNP	PGM5P2	ENST00000591037	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PGM5P2	HGNC	ENSG00000227558	tier1	-	-	38	0	0.00	19	16	45.71
KIF25	0	genome.wustl.edu	37	6	168431512	168431512	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	168431512	168431512	C	A	SNP	KIF25	ENST00000354419	human	ensembl	74_37	+1	known	missense	c.152	p.T51N	0.431	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF25	HGNC	ENSG00000125337	tier1	-	-	116	0	0.00	75	72	48.65
LMTK3	0	genome.wustl.edu	37	19	48997064	48997064	+	Silent	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	48997064	48997064	G	T	SNP	LMTK3	ENST00000270238	human	ensembl	74_37	-1	known	silent	c.4066	p.R1356	1.000	smart_Ser/Thr_dual-sp_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK3	HGNC	ENSG00000142235	tier1	-	-	53	0	0.00	29	20	40.82
FBXW10	0	genome.wustl.edu	37	17	18647962	18647962	+	Silent	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	18647962	18647962	T	C	SNP	FBXW10	ENST00000308799	human	ensembl	74_37	+1	known	silent	c.405	p.N135	0.684	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW10	HGNC	ENSG00000171931	tier1	-	-	142	1	0.70	94	91	49.19
MAN1B1	0	genome.wustl.edu	37	9	139994205	139994205	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	139994205	139994205	G	T	SNP	MAN1B1	ENST00000371589	human	ensembl	74_37	+1	known	missense	c.788	p.G263V	0.997	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	MAN1B1	HGNC	ENSG00000177239	tier1	-	-	51	0	0.00	29	31	51.67
SEMA3A	0	genome.wustl.edu	37	7	83764201	83764201	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	83764201	83764201	A	G	SNP	SEMA3A	ENST00000265362	human	ensembl	74_37	-1	known	missense	c.179	p.F60S	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3A	HGNC	ENSG00000075213	tier1	-	-	46	0	0.00	29	18	38.30
EYS	0	genome.wustl.edu	37	6	65532635	65532635	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	65532635	65532635	G	T	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	missense	c.3073	p.H1025N	0.907	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	tier1	-	-	38	0	0.00	24	12	33.33
ANKS6	0	genome.wustl.edu	37	9	101544812	101544812	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	101544812	101544812	C	T	SNP	ANKS6	ENST00000375018	human	ensembl	74_37	-1	known	missense	c.1156	p.V386I	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS6	HGNC	ENSG00000165138	tier1	-	-	70	0	0.00	31	27	46.55
LAIR1	0	genome.wustl.edu	37	19	54867563	54867563	+	Silent	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	54867563	54867563	C	A	SNP	LAIR1	ENST00000391742	human	ensembl	74_37	-1	known	silent	c.717	p.S239	0.000	NULL	smart_Ig_sub	-	no_errors	LAIR1	HGNC	ENSG00000167613	tier1	-	-	48	0	0.00	15	27	64.29
USP54	0	genome.wustl.edu	37	10	75276536	75276536	+	Silent	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	75276536	75276536	A	G	SNP	USP54	ENST00000339859	human	ensembl	74_37	-1	known	silent	c.3648	p.N1216	0.991	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP54	HGNC	ENSG00000166348	tier1	-	-	32	0	0.00	9	16	64.00
DNAJC13	0	genome.wustl.edu	37	3	132172211	132172211	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	132172211	132172211	G	A	SNP	DNAJC13	ENST00000260818	human	ensembl	74_37	+1	known	missense	c.607	p.G203S	1.000	NULL	pfam_DnaJ_domain,superfamily_ARM-type_fold,superfamily_GYF,smart_DnaJ_domain,pfscan_DnaJ_domain	-	no_errors	DNAJC13	HGNC	ENSG00000138246	tier1	-	-	34	0	0.00	16	19	54.29
ASNS	0	genome.wustl.edu	37	7	97488253	97488253	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	97488253	97488253	T	A	SNP	ASNS	ENST00000175506	human	ensembl	74_37	-1	known	missense	c.688	p.T230S	0.986	tigrfam_Asn_synth_AEB	pfam_Asn_synthase,pfam_GATase_dom,tigrfam_Asn_synth_AEB	-	no_errors	ASNS	HGNC	ENSG00000070669	tier1	-	-	24	0	0.00	7	13	65.00
SCN8A	0	genome.wustl.edu	37	12	52080928	52080928	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	52080928	52080928	G	T	SNP	SCN8A	ENST00000354534	human	ensembl	74_37	+1	known	missense	c.539	p.R180I	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,prints_Na_channel_a8su,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN8A	HGNC	ENSG00000196876	tier1	-	-	91	0	0.00	50	47	48.45
MT2A	0	genome.wustl.edu	37	16	56642956	56642956	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	56642956	56642956	C	T	SNP	MT2A	ENST00000245185	human	ensembl	74_37	+1	known	silent	c.81	p.T27	0.994	pfam_Metalthion_sfam_euk,superfamily_Metalthion_dom,prints_Metalthion_vert	pfam_Metalthion_sfam_euk,superfamily_Metalthion_dom,prints_Metalthion_vert	-	no_errors	MT2A	HGNC	ENSG00000125148	tier1	-	-	80	0	0.00	31	36	53.73
MPDZ	0	genome.wustl.edu	37	9	13119581	13119581	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	13119581	13119581	T	C	SNP	MPDZ	ENST00000319217	human	ensembl	74_37	-1	known	missense	c.5299	p.M1767V	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186	tier1	-	-	79	0	0.00	47	29	38.16
GAK	0	genome.wustl.edu	37	4	844858	844858	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	844858	844858	C	A	SNP	GAK	ENST00000314167	human	ensembl	74_37	-1	known	missense	c.3523	p.V1175F	1.000	superfamily_DnaJ_domain	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Tensin_phosphatase_C2-dom,pfam_DnaJ_domain,superfamily_Kinase-like_dom,superfamily_DnaJ_domain,superfamily_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_DnaJ_domain,pfscan_Prot_kinase_dom,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom,pfscan_DnaJ_domain	-	no_errors	GAK	HGNC	ENSG00000178950	tier1	-	-	52	0	0.00	41	28	40.58
MSLNL	0	genome.wustl.edu	37	16	820102	820102	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	820102	820102	G	T	SNP	MSLNL	ENST00000293892	human	ensembl	74_37	-1	known	missense	c.2883	p.S961R	0.003	NULL	pfam_Mesothelin	-	no_errors	MSLNL	HGNC	ENSG00000162006	tier1	-	-	17	0	0.00	21	6	22.22
ARHGAP35	0	genome.wustl.edu	37	19	47502610	47502610	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	47502610	47502610	G	T	SNP	ARHGAP35	ENST00000404338	human	ensembl	74_37	+1	known	missense	c.4086	p.K1362N	0.999	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_Small_GTPase,pfam_FF_domain,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP35	HGNC	ENSG00000160007	tier1	-	-	37	0	0.00	17	28	62.22
UNC5D	0	genome.wustl.edu	37	8	35606146	35606146	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	35606146	35606146	G	T	SNP	UNC5D	ENST00000404895	human	ensembl	74_37	+1	known	missense	c.1868	p.C623F	1.000	pfam_ZU5,smart_ZU5,pfscan_ZU5	pfam_ZU5,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Death_domain,pfam_Immunoglobulin,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5D	HGNC	ENSG00000156687	tier1	-	-	98	0	0.00	32	27	45.76
MLLT3	0	genome.wustl.edu	37	9	20413859	20413859	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	20413859	20413859	C	A	SNP	MLLT3	ENST00000380338	human	ensembl	74_37	-1	known	missense	c.985	p.D329Y	1.000	NULL	pfam_YEATS,pfscan_YEATS	-	no_errors	MLLT3	HGNC	ENSG00000171843	tier1	-	-	110	0	0.00	72	60	45.45
UBR4	0	genome.wustl.edu	37	1	19433164	19433164	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	19433164	19433164	T	C	SNP	UBR4	ENST00000375267	human	ensembl	74_37	-1	known	missense	c.12292	p.T4098A	0.996	superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR4	HGNC	ENSG00000127481	tier1	-	-	51	0	0.00	31	32	50.79
ALPK2	0	genome.wustl.edu	37	18	56203562	56203562	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	56203562	56203562	G	A	SNP	ALPK2	ENST00000361673	human	ensembl	74_37	-1	known	missense	c.3857	p.P1286L	0.000	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK2	HGNC	ENSG00000198796	tier1	-	-	45	0	0.00	32	6	15.79
COL4A3	0	genome.wustl.edu	37	2	228120776	228120776	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	228120776	228120776	C	A	SNP	COL4A3	ENST00000396578	human	ensembl	74_37	+1	known	missense	c.923	p.P308H	1.000	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A3	HGNC	ENSG00000169031	tier1	-	-	102	0	0.00	53	13	19.70
PCLO	0	genome.wustl.edu	37	7	82584090	82584090	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	82584090	82584090	T	A	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.6179	p.D2060V	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	60	0	0.00	25	9	26.47
DNAH17	0	genome.wustl.edu	37	17	76522813	76522813	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	76522813	76522813	G	T	SNP	DNAH17	ENST00000389840	human	ensembl	74_37	-1	known	missense	c.3631	p.Q1211K	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_HR1_rho-bd	-	no_errors	DNAH17	HGNC	ENSG00000187775	tier1	-	-	23	0	0.00	24	15	38.46
ENOX1	0	genome.wustl.edu	37	13	43930282	43930282	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	43930282	43930282	C	T	SNP	ENOX1	ENST00000261488	human	ensembl	74_37	-1	known	missense	c.596	p.R199K	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ENOX1	HGNC	ENSG00000120658	tier1	-	-	54	0	0.00	7	34	82.93
POTEA	0	genome.wustl.edu	37	8	43218152	43218152	+	RNA	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	43218152	43218152	A	G	SNP	POTEA	ENST00000522175	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	POTEA	HGNC	ENSG00000188877	tier1	-	-	43	0	0.00	54	9	14.29
HTT	0	genome.wustl.edu	37	4	3127356	3127356	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	3127356	3127356	G	T	SNP	HTT	ENST00000355072	human	ensembl	74_37	+1	known	missense	c.1402	p.A468S	1.000	superfamily_ARM-type_fold	pfam_Huntingtin_middle-repeat,pfam_HEAT,superfamily_ARM-type_fold,prints_Huntingtin	-	no_errors	HTT	HGNC	ENSG00000197386	tier1	-	-	79	0	0.00	37	39	51.32
PALB2	0	genome.wustl.edu	37	16	23625325	23625325	+	Missense_Mutation	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	23625325	23625325	C	G	SNP	PALB2	ENST00000261584	human	ensembl	74_37	-1	known	missense	c.3201	p.M1067I	1.000	superfamily_WD40_repeat_dom	superfamily_WD40_repeat_dom	-	no_errors	PALB2	HGNC	ENSG00000083093	tier1	-	-	42	0	0.00	28	13	31.71
TNN	0	genome.wustl.edu	37	1	175063262	175063262	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	175063262	175063262	G	T	SNP	TNN	ENST00000239462	human	ensembl	74_37	+1	known	missense	c.1461	p.M487I	0.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNN	HGNC	ENSG00000120332	tier1	-	-	27	0	0.00	51	38	42.70
RGS3	0	genome.wustl.edu	37	9	116356283	116356283	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	116356283	116356283	G	T	SNP	RGS3	ENST00000462403	human	ensembl	74_37	+1	known	missense	c.84	p.M28I	1.000	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS3	HGNC	ENSG00000138835	tier1	-	-	39	0	0.00	38	17	30.91
SLC8A3	0	genome.wustl.edu	37	14	70634207	70634207	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	70634207	70634207	C	T	SNP	SLC8A3	ENST00000381269	human	ensembl	74_37	-1	known	silent	c.933	p.E311	1.000	tigrfam_Na_Ca_Ex	pfam_NaCa_Exmemb,pfam_Calx_beta,smart_Calx_beta,prints_Na_Ca_Ex,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A3	HGNC	ENSG00000100678	tier1	-	-	120	0	0.00	35	55	61.11
NPC1L1	0	genome.wustl.edu	37	7	44560371	44560371	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	44560371	44560371	C	T	SNP	NPC1L1	ENST00000289547	human	ensembl	74_37	-1	known	silent	c.3129	p.Q1043	0.697	NULL	pfam_Patched,pfscan_SSD	-	no_errors	NPC1L1	HGNC	ENSG00000015520	tier1	-	-	48	0	0.00	14	17	54.84
HAP1	0	genome.wustl.edu	37	17	39888971	39888971	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	39888971	39888971	C	T	SNP	HAP1	ENST00000310778	human	ensembl	74_37	-1	known	silent	c.549	p.E183	1.000	pfam_HAP1_N	pfam_HAP1_N	-	no_errors	HAP1	HGNC	ENSG00000173805	tier1	-	-	35	0	0.00	32	14	30.43
ENPP2	0	genome.wustl.edu	37	8	120608123	120608123	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	120608123	120608123	C	T	SNP	ENPP2	ENST00000259486	human	ensembl	74_37	-1	known	silent	c.1092	p.R364	1.000	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,pfam_Somatomedin_B_dom,pfam_DNA/RNA_non-sp_Endonuclease,superfamily_Alkaline_phosphatase_core,smart_Somatomedin_B_dom,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A,pfscan_Somatomedin_B_dom,prints_Somatomedin_B_chordata	-	no_errors	ENPP2	HGNC	ENSG00000136960	tier1	-	-	58	0	0.00	36	84	70.00
ABCC4	0	genome.wustl.edu	37	13	95815416	95815416	+	Silent	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	95815416	95815416	G	A	SNP	ABCC4	ENST00000376887	human	ensembl	74_37	-1	known	silent	c.2268	p.T756	0.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM	-	no_errors	ABCC4	HGNC	ENSG00000125257	tier1	-	-	51	0	0.00	23	45	66.18
SERTAD1	0	genome.wustl.edu	37	19	40929268	40929268	+	Silent	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	40929268	40929268	C	A	SNP	SERTAD1	ENST00000357949	human	ensembl	74_37	-1	known	silent	c.186	p.P62	0.113	pfam_SERTA,pfscan_SERTA	pfam_SERTA,pfscan_SERTA	-	no_errors	SERTAD1	HGNC	ENSG00000197019	tier1	-	-	36	0	0.00	19	14	42.42
ENSG00000273000	0	genome.wustl.edu	37	22	24036865	24036865	+	RNA	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	22	24036865	24036865	C	A	SNP	ENSG00000273000	ENST00000421064	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	KB-1572G7.2	Clone_based_vega_gene	ENSG00000273000	tier1	-	-	13	0	0.00	5	9	64.29
FES	0	genome.wustl.edu	37	15	91434361	91434361	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	91434361	91434361	G	T	SNP	FES	ENST00000328850	human	ensembl	74_37	+1	known	missense	c.1470	p.E490D	0.956	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_SH2,smart_SH2,prints_SH2,pfscan_SH2	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_FCH_dom,superfamily_Kinase-like_dom,superfamily_t-SNARE,smart_FCH_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,pfscan_FCH_dom,pfscan_SH2,pfscan_Prot_kinase_dom	-	no_errors	FES	HGNC	ENSG00000182511	tier1	-	-	63	0	0.00	40	40	50.00
TNC	0	genome.wustl.edu	37	9	117808796	117808796	+	Missense_Mutation	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	117808796	117808796	C	G	SNP	TNC	ENST00000350763	human	ensembl	74_37	-1	known	missense	c.5018	p.R1673P	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNC	HGNC	ENSG00000041982	tier1	-	-	100	0	0.00	76	38	33.33
ARC	0	genome.wustl.edu	37	8	143695320	143695320	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	143695320	143695320	G	T	SNP	ARC	ENST00000356613	human	ensembl	74_37	-1	known	missense	c.313	p.L105M	1.000	prints_Activity-reg_cytoskelet-assoc	prints_Activity-reg_cytoskelet-assoc	-	no_errors	ARC	HGNC	ENSG00000198576	tier1	-	-	15	0	0.00	13	7	35.00
LRP6	0	genome.wustl.edu	37	12	12312804	12312804	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	12312804	12312804	G	A	SNP	LRP6	ENST00000261349	human	ensembl	74_37	-1	known	missense	c.2374	p.R792W	1.000	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP6	HGNC	ENSG00000070018	tier1	-	-	61	0	0.00	6	22	75.86
CENPE	0	genome.wustl.edu	37	4	104082324	104082324	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	104082324	104082324	C	T	SNP	CENPE	ENST00000265148	human	ensembl	74_37	-1	known	missense	c.2050	p.V684I	0.964	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_STAT_TF_coiled-coil,superfamily_Signal_recog_particl_SRP54_hlx,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	CENPE	HGNC	ENSG00000138778	tier1	rs201128037	-	53	0	0.00	34	16	32.00
CPSF2	0	genome.wustl.edu	37	14	92609368	92609368	+	Silent	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	92609368	92609368	A	G	SNP	CPSF2	ENST00000298875	human	ensembl	74_37	+1	known	silent	c.870	p.K290	1.000	pfam_Beta_Casp	pfam_Beta_Casp,pfam_RMMBL,pfam_Beta-lactamas-like,smart_Beta-lactamas-like	-	no_errors	CPSF2	HGNC	ENSG00000165934	tier1	-	-	103	0	0.00	63	30	32.26
ARHGAP20	0	genome.wustl.edu	37	11	110450632	110450632	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	110450632	110450632	G	T	SNP	ARHGAP20	ENST00000260283	human	ensembl	74_37	-1	known	missense	c.3038	p.P1013Q	0.000	NULL	pfam_RhoGAP_dom,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Ras-assoc,pfscan_RhoGAP_dom	-	no_errors	ARHGAP20	HGNC	ENSG00000137727	tier1	-	-	58	0	0.00	5	12	70.59
KIF11	0	genome.wustl.edu	37	10	94409639	94409639	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	94409639	94409639	A	G	SNP	KIF11	ENST00000260731	human	ensembl	74_37	+1	known	missense	c.2818	p.R940G	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF11	HGNC	ENSG00000138160	tier1	-	-	53	0	0.00	37	29	43.28
TRAPPC8	0	genome.wustl.edu	37	18	29435622	29435622	+	Splice_Site	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	29435622	29435622	C	A	SNP	TRAPPC8	ENST00000283351	human	ensembl	74_37	-1	known	splice_site	c.3336+1	e21+1	1.000	-	-	-	no_errors	TRAPPC8	HGNC	ENSG00000153339	tier1	-	-	27	0	0.00	17	15	46.88
OSBPL10	0	genome.wustl.edu	37	3	31743925	31743925	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	31743925	31743925	C	A	SNP	OSBPL10	ENST00000396556	human	ensembl	74_37	-1	known	missense	c.1171	p.G391C	0.998	NULL	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL10	HGNC	ENSG00000144645	tier1	-	-	37	0	0.00	26	5	16.13
DSPP	0	genome.wustl.edu	37	4	88536690	88536690	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	88536690	88536690	G	A	SNP	DSPP	ENST00000282478	human	ensembl	74_37	+1	known	missense	c.2876	p.S959N	0.527	NULL	NULL	-	no_errors	DSPP	HGNC	ENSG00000152591	tier1	-	-	120	0	0.00	61	41	40.20
HACE1	0	genome.wustl.edu	37	6	105178274	105178274	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	105178274	105178274	C	A	SNP	HACE1	ENST00000262903	human	ensembl	74_37	-1	known	missense	c.2531	p.G844V	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_Ankyrin_rpt,superfamily_HECT,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_HECT,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_HECT,prints_Ankyrin_rpt	-	no_errors	HACE1	HGNC	ENSG00000085382	tier1	-	-	25	0	0.00	12	10	45.45
CASC5	0	genome.wustl.edu	37	15	40913102	40913102	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	40913102	40913102	G	A	SNP	CASC5	ENST00000346991	human	ensembl	74_37	+1	known	missense	c.718	p.D240N	1.000	NULL	NULL	-	no_errors	CASC5	HGNC	ENSG00000137812	tier1	-	-	35	0	0.00	19	11	36.67
POLR2J3	0	genome.wustl.edu	37	7	102213019	102213019	+	RNA	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	102213019	102213019	C	A	SNP	POLR2J3	ENST00000443430	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	POLR2J3	HGNC	ENSG00000168255	tier1	-	-	138	0	0.00	91	28	23.53
SP7	0	genome.wustl.edu	37	12	53722026	53722026	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	53722026	53722026	C	T	SNP	SP7	ENST00000303846	human	ensembl	74_37	-1	known	silent	c.1200	p.E400	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP7	HGNC	ENSG00000170374	tier1	-	-	33	0	0.00	21	30	58.82
PTPRM	0	genome.wustl.edu	37	18	8076458	8076458	+	Missense_Mutation	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	8076458	8076458	G	C	SNP	PTPRM	ENST00000400060	human	ensembl	74_37	+1	known	missense	c.1447	p.G483R	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRM	HGNC	ENSG00000173482	tier1	-	-	35	0	0.00	17	15	46.88
NPIPB4	0	genome.wustl.edu	37	16	21847231	21847231	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	21847231	21847231	G	T	SNP	NPIPB4	ENST00000451409	human	ensembl	74_37	-1	known	missense	c.1802	p.P601Q	0.000	NULL	NULL	-	no_errors	NPIPB4	HGNC	ENSG00000185864	tier1	-	-	54	0	0.00	22	30	57.69
PRSS3P3	0	genome.wustl.edu	37	7	141988466	141988466	+	RNA	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	141988466	141988466	T	A	SNP	PRSS3P3	ENST00000463748	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.979	-	-	-	no_errors	PRSS3P3	HGNC	ENSG00000242115	tier1	-	-	80	0	0.00	43	19	30.65
ASXL3	0	genome.wustl.edu	37	18	31318560	31318560	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	31318560	31318560	A	G	SNP	ASXL3	ENST00000269197	human	ensembl	74_37	+1	known	missense	c.1192	p.T398A	0.002	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL3	HGNC	ENSG00000141431	tier1	-	-	50	0	0.00	24	9	27.27
ENSG00000232866	0	genome.wustl.edu	37	9	43135480	43135480	+	Missense_Mutation	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	43135480	43135480	C	G	SNP	ENSG00000232866	ENST00000377437	human	ensembl	74_37	+1	novel	missense	c.386	p.T129S	0.204	NULL	NULL	-	no_errors	AL513478.1	Clone_based_ensembl_gene	ENSG00000232866	tier1	-	-	20	0	0.00	12	14	53.85
WNK3	0	genome.wustl.edu	37	X	54334456	54334456	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	54334456	54334456	C	A	SNP	WNK3	ENST00000354646	human	ensembl	74_37	-1	known	missense	c.988	p.D330Y	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK3	HGNC	ENSG00000196632	tier1	-	-	21	0	0.00	23	8	25.81
UPF2	0	genome.wustl.edu	37	10	12077319	12077319	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	12077319	12077319	T	C	SNP	UPF2	ENST00000356352	human	ensembl	74_37	-1	known	missense	c.104	p.E35G	1.000	NULL	pfam_MIF4G-like_typ-3,pfam_Up-fram_suppressor-2,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	-	no_errors	UPF2	HGNC	ENSG00000151461	tier1	-	-	149	0	0.00	124	27	17.88
FAM163B	0	genome.wustl.edu	37	9	136444264	136444264	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	136444264	136444264	G	T	SNP	FAM163B	ENST00000356873	human	ensembl	74_37	-1	known	missense	c.381	p.S127R	1.000	NULL	NULL	-	no_errors	FAM163B	HGNC	ENSG00000196990	tier1	-	-	10	0	0.00	5	11	68.75
PRPF38B	0	genome.wustl.edu	37	1	109236215	109236215	+	RNA	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	109236215	109236215	T	C	SNP	PRPF38B	ENST00000467302	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PRPF38B	HGNC	ENSG00000134186	tier1	-	-	56	0	0.00	36	12	25.00
C12orf42	0	genome.wustl.edu	37	12	103699862	103699862	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	103699862	103699862	G	T	SNP	C12orf42	ENST00000378113	human	ensembl	74_37	-1	known	missense	c.521	p.P174H	0.001	NULL	NULL	-	no_errors	C12orf42	HGNC	ENSG00000179088	tier1	-	-	110	1	0.90	76	48	38.71
AP1S1	0	genome.wustl.edu	37	7	100802415	100802415	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	100802415	100802415	G	A	SNP	AP1S1	ENST00000337619	human	ensembl	74_37	+1	known	missense	c.367	p.V123I	0.976	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom,pirsf_AP_complex_ssu	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom,pirsf_AP_complex_ssu	-	no_errors	AP1S1	HGNC	ENSG00000106367	tier1	-	-	24	0	0.00	7	14	66.67
NR3C2	0	genome.wustl.edu	37	4	149357801	149357801	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	149357801	149357801	A	G	SNP	NR3C2	ENST00000355292	human	ensembl	74_37	-1	known	missense	c.212	p.L71P	1.000	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR3C2	HGNC	ENSG00000151623	tier1	-	-	108	0	0.00	94	31	24.80
SLC38A2	0	genome.wustl.edu	37	12	46765062	46765062	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	46765062	46765062	T	A	SNP	SLC38A2	ENST00000256689	human	ensembl	74_37	-1	known	missense	c.15	p.E5D	0.993	NULL	pfam_AA_transpt_TM	-	no_errors	SLC38A2	HGNC	ENSG00000134294	tier1	-	-	49	0	0.00	51	20	28.17
OPN1SW	0	genome.wustl.edu	37	7	128413780	128413780	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	128413780	128413780	G	T	SNP	OPN1SW	ENST00000249389	human	ensembl	74_37	-1	known	missense	c.850	p.L284I	0.304	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Opsin_blue,prints_Opsin	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Opsin_blue,prints_GPCR_Rhodpsn,prints_Opsin	-	no_errors	OPN1SW	HGNC	ENSG00000128617	tier1	-	-	58	0	0.00	34	23	40.35
OR8K5	0	genome.wustl.edu	37	11	55927239	55927239	+	Silent	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	55927239	55927239	T	A	SNP	OR8K5	ENST00000313447	human	ensembl	74_37	-1	known	silent	c.555	p.L185	0.037	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8K5	HGNC	ENSG00000181752	tier1	-	-	37	0	0.00	25	5	16.67
ENSG00000264657	0	genome.wustl.edu	37	14	28102477	28102478	+	RNA	DEL	TA	TA	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	28102477	28102478	TA	-	DEL	ENSG00000264657	ENST00000584270	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	hsa-mir-3171	miRBase	ENSG00000264657	tier1			40	0	0.00	26	3	10.34
PADI4	0	genome.wustl.edu	37	1	17634740	17634740	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	17634740	17634740	G	T	SNP	PADI4	ENST00000375448	human	ensembl	74_37	+1	known	missense	c.23	p.R8L	0.130	pfam_PAD_N,superfamily_Cupredoxin,pirsf_Protein-arginine_deiminase_sub	pfam_PAD_C,pfam_Prot_Arg_deaminase_cen_dom,pfam_PAD_N,superfamily_Prot_Arg_deaminase_cen_dom,superfamily_Cupredoxin,pirsf_Protein-arginine_deiminase_sub	-	no_errors	PADI4	HGNC	ENSG00000159339	tier1	-	-	53	0	0.00	28	19	40.43
CLDN17	0	genome.wustl.edu	37	21	31538437	31538437	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	21	31538437	31538437	G	T	SNP	CLDN17	ENST00000286808	human	ensembl	74_37	-1	known	missense	c.499	p.L167I	0.851	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin,prints_Claudin14,prints_Claudin8	-	no_errors	CLDN17	HGNC	ENSG00000156282	tier1	-	-	74	0	0.00	35	35	50.00
NDST2	0	genome.wustl.edu	37	10	75565485	75565485	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	75565485	75565485	G	A	SNP	NDST2	ENST00000309979	human	ensembl	74_37	-1	known	missense	c.1606	p.R536W	1.000	NULL	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST2	HGNC	ENSG00000166507	tier1	-	-	41	0	0.00	13	21	61.76
OBSL1	0	genome.wustl.edu	37	2	220432856	220432856	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	220432856	220432856	C	T	SNP	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	silent	c.1203	p.R401	0.998	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006	tier1	-	-	39	0	0.00	21	9	30.00
DNAH9	0	genome.wustl.edu	37	17	11532752	11532752	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	11532752	11532752	C	T	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	silent	c.1369	p.L457	0.052	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174	tier1	-	-	37	0	0.00	31	30	49.18
TANK	0	genome.wustl.edu	37	2	162036196	162036196	+	Missense_Mutation	SNP	A	A	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	162036196	162036196	A	C	SNP	TANK	ENST00000259075	human	ensembl	74_37	+1	known	missense	c.23	p.Q8P	1.000	NULL	NULL	-	no_errors	TANK	HGNC	ENSG00000136560	tier1	-	-	57	0	0.00	32	14	30.43
CSH2	0	genome.wustl.edu	37	17	61950631	61950631	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	61950631	61950631	C	T	SNP	CSH2	ENST00000392886	human	ensembl	74_37	-1	known	missense	c.79	p.V27I	0.009	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	-	no_errors	CSH2	HGNC	ENSG00000213218	tier1	-	-	127	1	0.78	127	56	30.60
HK1	0	genome.wustl.edu	37	10	71142254	71142254	+	Missense_Mutation	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	71142254	71142254	G	C	SNP	HK1	ENST00000448642	human	ensembl	74_37	+1	known	missense	c.1382	p.R461P	1.000	pfam_Hexokinase_C	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HK1	HGNC	ENSG00000156515	tier1	-	-	75	0	0.00	34	26	43.33
GAK	0	genome.wustl.edu	37	4	844818	844818	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	844818	844818	C	A	SNP	GAK	ENST00000314167	human	ensembl	74_37	-1	known	missense	c.3563	p.G1188V	1.000	superfamily_DnaJ_domain	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Tensin_phosphatase_C2-dom,pfam_DnaJ_domain,superfamily_Kinase-like_dom,superfamily_DnaJ_domain,superfamily_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_DnaJ_domain,pfscan_Prot_kinase_dom,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom,pfscan_DnaJ_domain	-	no_errors	GAK	HGNC	ENSG00000178950	tier1	-	-	61	0	0.00	52	46	46.94
GRB14	0	genome.wustl.edu	37	2	165365007	165365007	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	165365007	165365007	C	A	SNP	GRB14	ENST00000263915	human	ensembl	74_37	-1	known	missense	c.981	p.E327D	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_BPS-dom,pfam_SH2,pfam_Ras-assoc,pfam_Pleckstrin_homology,smart_Ras-assoc,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SH2,prints_SH2	-	no_errors	GRB14	HGNC	ENSG00000115290	tier1	-	-	39	0	0.00	7	18	72.00
ZNF714	0	genome.wustl.edu	37	19	21300164	21300164	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	21300164	21300164	G	T	SNP	ZNF714	ENST00000596143	human	ensembl	74_37	+1	known	nonsense	c.694	p.E232*	0.118	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF714	HGNC	ENSG00000160352	tier1	-	-	34	0	0.00	20	8	28.57
LAPTM5	0	genome.wustl.edu	37	1	31215189	31215189	+	RNA	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	31215189	31215189	C	T	SNP	LAPTM5	ENST00000476492	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LAPTM5	HGNC	ENSG00000162511	tier1	-	-	45	0	0.00	27	14	34.15
ZNF680	0	genome.wustl.edu	37	7	63981541	63981541	+	Nonstop_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	63981541	63981541	A	G	SNP	ZNF680	ENST00000309683	human	ensembl	74_37	-1	known	nonstop	c.1591	p.*531Q	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF680	HGNC	ENSG00000173041	tier1	-	-	75	0	0.00	47	13	21.67
B3GALT2	0	genome.wustl.edu	37	1	193149557	193149557	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	193149557	193149557	A	T	SNP	B3GALT2	ENST00000367434	human	ensembl	74_37	-1	known	missense	c.1136	p.L379Q	1.000	NULL	pfam_Glyco_trans_31	-	no_errors	B3GALT2	HGNC	ENSG00000162630	tier1	-	-	29	0	0.00	61	6	8.96
TNIP3	0	genome.wustl.edu	37	4	122053789	122053789	+	Silent	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	122053789	122053789	C	A	SNP	TNIP3	ENST00000057513	human	ensembl	74_37	-1	known	silent	c.975	p.P325	0.545	NULL	NULL	-	no_errors	TNIP3	HGNC	ENSG00000050730	tier1	-	-	49	0	0.00	39	29	42.65
FRG1	0	genome.wustl.edu	37	4	190874255	190874255	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	190874255	190874255	A	T	SNP	FRG1	ENST00000226798	human	ensembl	74_37	+1	known	missense	c.292	p.T98S	1.000	pfam_FRG1,pfam_Fascin-domain,superfamily_Actin_cross-linking	pfam_FRG1,pfam_Fascin-domain,superfamily_Actin_cross-linking	-	no_errors	FRG1	HGNC	ENSG00000109536	tier1	rs75162394	-	145	1	0.68	185	17	8.42
TTC25	0	genome.wustl.edu	37	17	40117084	40117084	+	RNA	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	40117084	40117084	G	T	SNP	TTC25	ENST00000377540	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	TTC25	HGNC	ENSG00000204815	tier1	-	-	39	0	0.00	20	27	57.45
WRN	0	genome.wustl.edu	37	8	30938577	30938577	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	30938577	30938577	A	T	SNP	WRN	ENST00000298139	human	ensembl	74_37	+1	known	missense	c.1034	p.E345V	0.013	NULL	pfam_3'-5'_exonuclease_dom,pfam_Helicase_C,pfam_RQC_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_HRDC_dom,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,superfamily_HRDC-like,smart_3'-5'_exonuclease_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_HRDC_dom,pfscan_HRDC_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	WRN	HGNC	ENSG00000165392	tier1	-	-	34	0	0.00	6	11	64.71
ANKUB1	0	genome.wustl.edu	37	3	149485200	149485200	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	149485200	149485200	A	G	SNP	ANKUB1	ENST00000446160	human	ensembl	74_37	-1	known	missense	c.1249	p.S417P	0.001	NULL	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ubiquitin_supergroup	-	no_errors	ANKUB1	HGNC	ENSG00000206199	tier1	-	-	99	0	0.00	65	20	23.53
KRTAP10-4	0	genome.wustl.edu	37	21	45994186	45994186	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	21	45994186	45994186	G	A	SNP	KRTAP10-4	ENST00000400374	human	ensembl	74_37	+1	known	missense	c.551	p.S184N	0.980	NULL	NULL	-	no_errors	KRTAP10-4	HGNC	ENSG00000215454	tier1	-	-	103	0	0.00	58	41	41.41
PREX2	0	genome.wustl.edu	37	8	68982086	68982086	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	68982086	68982086	G	T	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	missense	c.1460	p.C487F	1.000	NULL	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889	tier1	-	-	81	0	0.00	102	23	18.40
MIR31HG	0	genome.wustl.edu	37	9	21455749	21455749	+	RNA	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	21455749	21455749	C	A	SNP	MIR31HG	ENST00000304425	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	MIR31HG	HGNC	ENSG00000171889	tier1	-	-	68	0	0.00	46	59	56.19
LAMA2	0	genome.wustl.edu	37	6	129725054	129725054	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	129725054	129725054	G	T	SNP	LAMA2	ENST00000421865	human	ensembl	74_37	+1	known	nonsense	c.5815	p.E1939*	1.000	NULL	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_B_type_IV,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_t-SNARE,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA2	HGNC	ENSG00000196569	tier1	-	-	37	0	0.00	28	10	26.32
ZNF85	0	genome.wustl.edu	37	19	21131600	21131600	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	21131600	21131600	G	T	SNP	ZNF85	ENST00000328178	human	ensembl	74_37	+1	known	missense	c.280	p.D94Y	0.225	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF85	HGNC	ENSG00000105750	tier1	-	-	66	0	0.00	29	21	42.00
NEFL	0	genome.wustl.edu	37	8	24809698	24809698	+	RNA	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	24809698	24809698	A	T	SNP	NEFL	ENST00000221169	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	NEFL	HGNC	ENSG00000104725	tier1	-	-	45	0	0.00	17	15	46.88
PNISR	0	genome.wustl.edu	37	6	99848148	99848148	+	RNA	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	99848148	99848148	C	T	SNP	PNISR	ENST00000481229	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PNISR	HGNC	ENSG00000132424	tier1	-	-	47	0	0.00	21	20	48.78
ANKUB1	0	genome.wustl.edu	37	3	149488423	149488423	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	149488423	149488423	C	T	SNP	ANKUB1	ENST00000446160	human	ensembl	74_37	-1	known	missense	c.490	p.E164K	1.000	superfamily_Ankyrin_rpt-contain_dom	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ubiquitin_supergroup	-	no_errors	ANKUB1	HGNC	ENSG00000206199	tier1	-	-	38	0	0.00	24	11	31.43
LONRF2	0	genome.wustl.edu	37	2	100911951	100911951	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	100911951	100911951	G	A	SNP	LONRF2	ENST00000393437	human	ensembl	74_37	-1	known	missense	c.1541	p.P514L	0.054	NULL	pfam_Pept_S16_N,pfam_Znf_C3HC4_RING-type,superfamily_PUA-like_domain,smart_Znf_RING,smart_TPR_repeat,smart_Pept_S16_N,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	LONRF2	HGNC	ENSG00000170500	tier1	-	-	30	0	0.00	30	24	44.44
SCARA5	0	genome.wustl.edu	37	8	27824007	27824007	+	Silent	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	27824007	27824007	C	A	SNP	SCARA5	ENST00000354914	human	ensembl	74_37	-1	known	silent	c.165	p.L55	0.997	NULL	pfam_SRCR,pfam_Collagen,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	-	no_errors	SCARA5	HGNC	ENSG00000168079	tier1	-	-	38	0	0.00	12	8	40.00
C15orf60	0	genome.wustl.edu	37	15	73848728	73848728	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	73848728	73848728	C	A	SNP	C15orf60	ENST00000331090	human	ensembl	74_37	+1	known	missense	c.632	p.A211D	1.000	NULL	NULL	-	no_errors	C15orf60	HGNC	ENSG00000183324	tier1	-	-	29	0	0.00	15	12	44.44
TRIOBP	0	genome.wustl.edu	37	22	38111933	38111933	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	22	38111933	38111933	A	T	SNP	TRIOBP	ENST00000406386	human	ensembl	74_37	+1	known	missense	c.620	p.K207I	0.143	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	TRIOBP	HGNC	ENSG00000100106	tier1	-	-	19	0	0.00	23	12	34.29
ATP5D	0	genome.wustl.edu	37	19	1244408	1244408	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	1244408	1244408	A	G	SNP	ATP5D	ENST00000215375	human	ensembl	74_37	+1	known	missense	c.479	p.N160S	0.994	superfamily_ATPase_F1_dsu/esu_C,tigrfam_ATPase_F1-cplx_dsu/esu	pfam_ATPase_F1-cplx_dsu/esu_N,superfamily_ATPase_F1-cplx_dsu/esu_N,superfamily_ATPase_F1_dsu/esu_C,tigrfam_ATPase_F1-cplx_dsu/esu	-	no_errors	ATP5D	HGNC	ENSG00000099624	tier1	-	-	65	0	0.00	55	15	21.43
TNXB	0	genome.wustl.edu	37	6	32018039	32018039	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	32018039	32018039	T	C	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.9169	p.I3057V	0.006	superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	tier1	-	-	58	0	0.00	32	46	58.97
SPTAN1	0	genome.wustl.edu	37	9	131369916	131369916	+	Silent	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	131369916	131369916	G	T	SNP	SPTAN1	ENST00000358161	human	ensembl	74_37	+1	known	silent	c.4080	p.G1360	0.651	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_EF_hand_dom,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3,prints_SH3_domain	-	no_errors	SPTAN1	HGNC	ENSG00000197694	tier1	-	-	61	0	0.00	45	34	43.04
ADAMTS7	0	genome.wustl.edu	37	15	79058433	79058433	+	Missense_Mutation	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	79058433	79058433	C	G	SNP	ADAMTS7	ENST00000388820	human	ensembl	74_37	-1	known	missense	c.3820	p.G1274R	0.001	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS7	HGNC	ENSG00000136378	tier1	-	-	257	1	0.39	189	110	36.79
XYLT1	0	genome.wustl.edu	37	16	17235079	17235079	+	Silent	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	17235079	17235079	C	A	SNP	XYLT1	ENST00000261381	human	ensembl	74_37	-1	known	silent	c.1518	p.V506	1.000	pfam_Glyco_trans_14	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT1	HGNC	ENSG00000103489	tier1	-	-	34	0	0.00	17	18	51.43
ANKRD33	0	genome.wustl.edu	37	12	52284969	52284969	+	Splice_Site	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	52284969	52284969	G	C	SNP	ANKRD33	ENST00000340970	human	ensembl	74_37	+1	known	splice_site	c.665-1	e4-1	0.000	-	-	-	no_errors	ANKRD33	HGNC	ENSG00000167612	tier1	rs147411258	-	64	0	0.00	41	29	41.43
GNAS	0	genome.wustl.edu	37	20	57464277	57464278	+	RNA	INS	-	-	CGGCG			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	20	57464277	57464278	-	CGGCG	INS	GNAS	ENST00000469431	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.949:0.921	-	-	-	no_errors	GNAS	HGNC	ENSG00000087460	tier1			NA	NA	NA	NA	NA	NA
SAFB2	0	genome.wustl.edu	37	19	5590344	5590344	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	5590344	5590344	C	A	SNP	SAFB2	ENST00000252542	human	ensembl	74_37	-1	known	missense	c.2470	p.G824C	0.570	NULL	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SAFB2	HGNC	ENSG00000130254	tier1	rs140108933	GMAF=0.0005	88	0	0.00	84	26	23.64
NRK	0	genome.wustl.edu	37	X	105153460	105153460	+	Silent	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	105153460	105153460	C	G	SNP	NRK	ENST00000428173	human	ensembl	74_37	+1	known	silent	c.1830	p.L610	0.982	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Citron,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	NRK	HGNC	ENSG00000123572	tier1	-	-	28	0	0.00	42	10	19.23
TEX30	0	genome.wustl.edu	37	13	103422406	103422406	+	RNA	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	103422406	103422406	C	G	SNP	TEX30	ENST00000487260	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TEX30	HGNC	ENSG00000151287	tier1	-	-	27	0	0.00	17	5	22.73
POLE	0	genome.wustl.edu	37	12	133225515	133225515	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	133225515	133225515	C	A	SNP	POLE	ENST00000320574	human	ensembl	74_37	-1	known	missense	c.4149	p.K1383N	1.000	NULL	pfam_DNA_pol_e_suA_C,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	-	no_errors	POLE	HGNC	ENSG00000177084	tier1	-	-	21	0	0.00	16	15	48.39
TP53	0	genome.wustl.edu	37	17	7579521	7579521	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	7579521	7579521	C	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	nonsense	c.166	p.E56*	0.074	NULL	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	34	0	0.00	5	17	77.27
CXorf66	0	genome.wustl.edu	37	X	139038653	139038653	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	139038653	139038653	C	A	SNP	CXorf66	ENST00000370540	human	ensembl	74_37	-1	known	missense	c.488	p.R163M	0.000	NULL	NULL	-	no_errors	CXorf66	HGNC	ENSG00000203933	tier1	-	-	191	1	0.52	20	49	71.01
PTCH1	0	genome.wustl.edu	37	9	98240465	98240465	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	98240465	98240465	C	A	SNP	PTCH1	ENST00000331920	human	ensembl	74_37	-1	known	missense	c.1219	p.V407F	1.000	pfam_Patched,tigrfam_TM_rcpt_patched	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	-	no_errors	PTCH1	HGNC	ENSG00000185920	tier1	-	-	45	0	0.00	19	27	58.70
SEMA3F	0	genome.wustl.edu	37	3	50220339	50220339	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	50220339	50220339	C	A	SNP	SEMA3F	ENST00000002829	human	ensembl	74_37	+1	known	missense	c.906	p.N302K	0.139	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,smart_Ig_sub2,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3F	HGNC	ENSG00000001617	tier1	-	-	44	0	0.00	45	18	28.57
NEB	0	genome.wustl.edu	37	2	152521307	152521307	+	Nonsense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	152521307	152521307	A	T	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	nonsense	c.5309	p.L1770*	0.392	pfam_Nebulin_35r-motif,smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091	tier1	-	-	67	0	0.00	43	18	29.51
SLC9A3	0	genome.wustl.edu	37	5	492106	492106	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	492106	492106	T	A	SNP	SLC9A3	ENST00000264938	human	ensembl	74_37	-1	known	missense	c.292	p.I98F	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,superfamily_Reg_factor_effector_dom,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A3	HGNC	ENSG00000066230	tier1	-	-	52	0	0.00	17	35	67.31
DPPA2	0	genome.wustl.edu	37	3	109023467	109023467	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	109023467	109023467	C	A	SNP	DPPA2	ENST00000478945	human	ensembl	74_37	-1	known	missense	c.709	p.G237C	0.720	NULL	pfscan_SAP_dom	-	no_errors	DPPA2	HGNC	ENSG00000163530	tier1	-	-	66	0	0.00	20	23	53.49
OTOP1	0	genome.wustl.edu	37	4	4228274	4228282	+	In_Frame_Del	DEL	CCACAGCAG	CCACAGCAG	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	CCACAGCAG	CCACAGCAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	4	4228274	4228282	CCACAGCAG	-	DEL	OTOP1	ENST00000296358	human	ensembl	74_37	-1	known	in_frame_del	c.318_310	p.LLW104in_frame_del	1.000:1.000:1.000:0.995:0.999:0.998:0.998:1.000:1.000	NULL	pfam_Otopetrin	-	no_errors	OTOP1	HGNC	ENSG00000163982	tier1			NA	NA	NA	NA	NA	NA
LOC644669	0	genome.wustl.edu	37	18	15316565	15316565	+	RNA	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	15316565	15316565	T	C	SNP	LOC644669	ENST00000455308	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.097	-	-	-	no_errors	AP005901.1	Clone_based_vega_gene	ENSG00000215512	tier1	-	-	50	0	0.00	31	11	26.19
WNT7A	0	genome.wustl.edu	37	3	13860468	13860468	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	13860468	13860468	C	A	SNP	WNT7A	ENST00000285018	human	ensembl	74_37	-1	known	missense	c.1023	p.E341D	1.000	pfam_Wnt,smart_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt7	-	no_errors	WNT7A	HGNC	ENSG00000154764	tier1	-	-	67	0	0.00	24	6	20.00
RUFY4	0	genome.wustl.edu	37	2	218940285	218940285	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	218940285	218940285	C	A	SNP	RUFY4	ENST00000374155	human	ensembl	74_37	+1	known	missense	c.1130	p.A377E	0.000	NULL	pfam_Run,superfamily_Znf_FYVE_PHD,smart_Run,pfscan_Run	-	no_errors	RUFY4	HGNC	ENSG00000188282	tier1	-	-	31	0	0.00	21	7	25.00
ENSG00000250770	0	genome.wustl.edu	37	12	3407270	3407270	+	RNA	DEL	G	G	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	3407270	3407270	G	-	DEL	ENSG00000250770	ENST00000505276	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP5-1063M23.1	Clone_based_vega_gene	ENSG00000250770	tier1			31	0	0.00	7	4	36.36
GPC5	0	genome.wustl.edu	37	13	92560271	92560271	+	Missense_Mutation	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	92560271	92560271	T	C	SNP	GPC5	ENST00000377067	human	ensembl	74_37	+1	known	missense	c.1361	p.V454A	1.000	pfam_Glypican	pfam_Glypican	-	no_errors	GPC5	HGNC	ENSG00000179399	tier1	-	-	45	0	0.00	37	12	24.49
ENSG00000272268	0	genome.wustl.edu	37	2	6112523	6112523	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	6112523	6112523	C	-	DEL	ENSG00000272268	ENST00000391666	human	ensembl	74_37	+1	known	frame_shift_del	c.467	p.T156fs	0.000	NULL	NULL	-	no_errors	FLJ30594	Uniprot_gn	ENSG00000272268	tier1			27	0	0.00	14	8	36.36
SLC6A15	0	genome.wustl.edu	37	12	85264428	85264428	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	85264428	85264428	C	A	SNP	SLC6A15	ENST00000266682	human	ensembl	74_37	-1	known	missense	c.1324	p.A442S	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A15	HGNC	ENSG00000072041	tier1	-	-	23	0	0.00	20	17	45.95
MYH6	0	genome.wustl.edu	37	14	23855802	23855802	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	23855802	23855802	G	A	SNP	MYH6	ENST00000356287	human	ensembl	74_37	-1	known	missense	c.4681	p.L1561F	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH6	HGNC	ENSG00000197616	tier1	-	-	54	0	0.00	46	19	29.23
ELF3	0	genome.wustl.edu	37	1	201982979	201982979	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	201982979	201982979	G	T	SNP	ELF3	ENST00000359651	human	ensembl	74_37	+1	known	missense	c.828	p.W276C	1.000	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ELF3	HGNC	ENSG00000163435	tier1	-	-	68	0	0.00	65	21	24.42
UHRF1BP1	0	genome.wustl.edu	37	6	34835069	34835069	+	Silent	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	34835069	34835069	G	C	SNP	UHRF1BP1	ENST00000192788	human	ensembl	74_37	+1	known	silent	c.3480	p.G1160	0.110	NULL	NULL	-	no_errors	UHRF1BP1	HGNC	ENSG00000065060	tier1	-	-	48	0	0.00	53	17	24.29
MUC16	0	genome.wustl.edu	37	19	9080475	9080475	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	9080475	9080475	C	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	nonsense	c.9556	p.E3186*	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	80	0	0.00	68	22	24.44
SNHG11	0	genome.wustl.edu	37	20	37076687	37076687	+	RNA	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	20	37076687	37076687	C	G	SNP	SNHG11	ENST00000432153	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG11	HGNC	ENSG00000174365	tier1	-	-	69	0	0.00	59	22	27.16
TFCP2	0	genome.wustl.edu	37	12	51501099	51501099	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	51501099	51501099	C	A	SNP	TFCP2	ENST00000257915	human	ensembl	74_37	-1	known	missense	c.748	p.D250Y	1.000	pfam_CP2	pfam_CP2,superfamily_SAM/pointed	-	no_errors	TFCP2	HGNC	ENSG00000135457	tier1	-	-	77	0	0.00	37	39	51.32
OR5D16	0	genome.wustl.edu	37	11	55607142	55607142	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	55607142	55607142	A	T	SNP	OR5D16	ENST00000378396	human	ensembl	74_37	+1	known	missense	c.915	p.K305N	0.053	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D16	HGNC	ENSG00000205029	tier1	-	-	59	0	0.00	10	16	61.54
SSUH2	0	genome.wustl.edu	37	3	8667267	8667267	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	8667267	8667267	T	A	SNP	SSUH2	ENST00000544814	human	ensembl	74_37	-1	known	missense	c.834	p.K278N	0.508	NULL	superfamily_HSP_DnaJ_Cys-rich_dom	-	no_errors	SSUH2	HGNC	ENSG00000125046	tier1	-	-	66	0	0.00	27	42	60.87
CKAP5	0	genome.wustl.edu	37	11	46831304	46831304	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	46831304	46831304	C	T	SNP	CKAP5	ENST00000415402	human	ensembl	74_37	-1	known	missense	c.751	p.D251N	1.000	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,superfamily_Homing_endonucl,pfscan_HEAT_type_2	-	no_errors	CKAP5	HGNC	ENSG00000175216	tier1	-	-	77	0	0.00	28	36	56.25
PTPRB	0	genome.wustl.edu	37	12	70964952	70964952	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	70964952	70964952	T	A	SNP	PTPRB	ENST00000334414	human	ensembl	74_37	-1	known	missense	c.3224	p.D1075V	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Ricin_B_lectin,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRB	HGNC	ENSG00000127329	tier1	-	-	29	0	0.00	22	19	46.34
TDRD6	0	genome.wustl.edu	37	6	46660594	46660594	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	46660594	46660594	A	G	SNP	TDRD6	ENST00000316081	human	ensembl	74_37	+1	known	missense	c.4729	p.R1577G	0.029	pfam_Tudor,smart_Tudor,pfscan_Tudor	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD6	HGNC	ENSG00000180113	tier1	-	-	40	0	0.00	18	24	57.14
TENM2	0	genome.wustl.edu	37	5	167617455	167617455	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	167617455	167617455	G	T	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	missense	c.2683	p.D895Y	0.878	superfamily_ConA-like_lec_gl_sf	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934	tier1	-	-	45	0	0.00	16	12	42.86
IFNLR1	0	genome.wustl.edu	37	1	24507286	24507286	+	Silent	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	24507286	24507286	C	A	SNP	IFNLR1	ENST00000327535	human	ensembl	74_37	-1	known	silent	c.117	p.V39	0.733	superfamily_Fibronectin_type3	superfamily_Fibronectin_type3	-	no_errors	IFNLR1	HGNC	ENSG00000185436	tier1	-	-	46	0	0.00	40	21	34.43
KLHL12	0	genome.wustl.edu	37	1	202878160	202878160	+	Silent	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	202878160	202878160	T	A	SNP	KLHL12	ENST00000435533	human	ensembl	74_37	-1	known	silent	c.924	p.G308	0.873	pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL12	HGNC	ENSG00000117153	tier1	-	-	63	0	0.00	85	16	15.84
FBXL7	0	genome.wustl.edu	37	5	15500816	15500816	+	Missense_Mutation	SNP	A	A	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	15500816	15500816	A	C	SNP	FBXL7	ENST00000504595	human	ensembl	74_37	+1	known	missense	c.31	p.S11R	1.000	NULL	pfam_Leu-rich_rpt,pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_F-box_dom	-	no_errors	FBXL7	HGNC	ENSG00000183580	tier1	-	-	65	0	0.00	41	20	32.79
ZBBX	0	genome.wustl.edu	37	3	167033549	167033549	+	Missense_Mutation	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	167033549	167033549	G	C	SNP	ZBBX	ENST00000307529	human	ensembl	74_37	-1	known	missense	c.1263	p.D421E	0.000	NULL	pfam_Znf_B-box	-	no_errors	ZBBX	HGNC	ENSG00000169064	tier1	-	-	88	0	0.00	58	29	33.33
RGS22	0	genome.wustl.edu	37	8	101083605	101083605	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	101083605	101083605	G	-	DEL	RGS22	ENST00000360863	human	ensembl	74_37	-1	known	frame_shift_del	c.586	p.G197fs	1.000	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	RGS22	HGNC	ENSG00000132554	tier1			67	0	0.00	76	41	35.04
ABCC10	0	genome.wustl.edu	37	6	43410802	43410802	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	43410802	43410802	G	T	SNP	ABCC10	ENST00000372530	human	ensembl	74_37	+1	known	missense	c.2321	p.S774I	0.998	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC10	HGNC	ENSG00000124574	tier1	-	-	28	0	0.00	17	9	34.62
CA8	0	genome.wustl.edu	37	8	61192380	61192380	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	61192380	61192380	G	T	SNP	CA8	ENST00000317995	human	ensembl	74_37	-1	known	missense	c.160	p.L54I	0.971	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA8	HGNC	ENSG00000178538	tier1	-	-	36	0	0.00	42	9	17.65
SPRY2	0	genome.wustl.edu	37	13	80911598	80911598	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	80911598	80911598	T	A	SNP	SPRY2	ENST00000377102	human	ensembl	74_37	-1	known	missense	c.243	p.R81S	0.986	NULL	pfam_Sprouty	-	no_errors	SPRY2	HGNC	ENSG00000136158	tier1	-	-	66	0	0.00	36	29	44.62
ZNHIT6	0	genome.wustl.edu	37	1	86171839	86171839	+	Silent	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	86171839	86171839	T	C	SNP	ZNHIT6	ENST00000370574	human	ensembl	74_37	-1	known	silent	c.837	p.R279	0.773	NULL	pfam_Znf_HIT,pfscan_Znf_HIT	-	no_errors	ZNHIT6	HGNC	ENSG00000117174	tier1	-	-	52	0	0.00	38	37	49.33
CHEK2	0	genome.wustl.edu	37	22	29085135	29085135	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	22	29085135	29085135	C	A	SNP	CHEK2	ENST00000382580	human	ensembl	74_37	-1	known	missense	c.1659	p.Q553H	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_FHA_dom,superfamily_Kinase-like_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_FHA_dom,pfscan_Prot_kinase_dom	-	no_errors	CHEK2	HGNC	ENSG00000183765	tier1	-	-	118	0	0.00	140	43	23.50
CLCA1	0	genome.wustl.edu	37	1	86934763	86934763	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	86934763	86934763	G	T	SNP	CLCA1	ENST00000234701	human	ensembl	74_37	+1	known	missense	c.109	p.V37F	1.000	pfam_Cl_channel_Ca,tigrfam_CaCC_prot	pfam_Cl_channel_Ca,pfam_DUF1973,pfam_VWF_A,superfamily_Fibronectin_type3,smart_VWF_A,pfscan_VWF_A,tigrfam_CaCC_prot	-	no_errors	CLCA1	HGNC	ENSG00000016490	tier1	-	-	48	0	0.00	37	22	37.29
OR6F1	0	genome.wustl.edu	37	1	247875158	247875158	+	Silent	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	247875158	247875158	A	G	SNP	OR6F1	ENST00000302084	human	ensembl	74_37	-1	known	silent	c.900	p.T300	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6F1	HGNC	ENSG00000169214	tier1	-	-	47	0	0.00	78	7	8.24
KLF8	0	genome.wustl.edu	37	X	56310908	56310908	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	56310908	56310908	G	T	SNP	KLF8	ENST00000468660	human	ensembl	74_37	+1	known	missense	c.1061	p.R354L	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF8	HGNC	ENSG00000102349	tier1	-	-	29	0	0.00	20	14	41.18
OR2Y1	0	genome.wustl.edu	37	5	180166611	180166611	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	180166611	180166611	C	A	SNP	OR2Y1	ENST00000307832	human	ensembl	74_37	-1	known	missense	c.448	p.G150C	0.011	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2Y1	HGNC	ENSG00000174339	tier1	-	-	31	0	0.00	14	5	26.32
SLC35F5	0	genome.wustl.edu	37	2	114500277	114500277	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	114500277	114500277	A	-	DEL	SLC35F5	ENST00000245680	human	ensembl	74_37	-1	known	frame_shift_del	c.742	p.C248fs	1.000	pfam_DMT	pfam_DMT	-	no_errors	SLC35F5	HGNC	ENSG00000115084	tier1			25	0	0.00	20	3	13.04
HAUS7	0	genome.wustl.edu	37	X	152722416	152722416	+	RNA	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	152722416	152722416	C	A	SNP	HAUS7	ENST00000464993	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HAUS7	HGNC	ENSG00000213397	tier1	-	-	22	0	0.00	1	12	92.31
ANKRA2	0	genome.wustl.edu	37	5	72850211	72850211	+	Silent	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	72850211	72850211	A	G	SNP	ANKRA2	ENST00000296785	human	ensembl	74_37	-1	known	silent	c.741	p.N247	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRA2	HGNC	ENSG00000164331	tier1	-	-	35	0	0.00	47	16	25.40
SOS1	0	genome.wustl.edu	37	2	39281931	39281931	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	39281931	39281931	C	T	SNP	SOS1	ENST00000402219	human	ensembl	74_37	-1	known	missense	c.544	p.D182N	1.000	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Histone_core_D,superfamily_Ras_GEF_dom,superfamily_Histone-fold,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	SOS1	HGNC	ENSG00000115904	tier1	-	-	49	0	0.00	32	17	34.69
NFIA	0	genome.wustl.edu	37	1	61331068	61331068	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	61331068	61331068	C	T	SNP	NFIA	ENST00000371191	human	ensembl	74_37	+1	putative	missense	c.26	p.A9V	1.000	NULL	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIA	HGNC	ENSG00000162599	tier1	-	-	72	0	0.00	46	44	48.89
MYBPC2	0	genome.wustl.edu	37	19	50951635	50951635	+	Missense_Mutation	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	50951635	50951635	C	G	SNP	MYBPC2	ENST00000357701	human	ensembl	74_37	+1	known	missense	c.1460	p.S487C	0.982	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC2	HGNC	ENSG00000086967	tier1	-	-	53	0	0.00	23	10	30.30
CLASP1	0	genome.wustl.edu	37	2	122206697	122206697	+	Splice_Site	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	2	122206697	122206697	C	A	SNP	CLASP1	ENST00000263710	human	ensembl	74_37	-1	known	splice_site	c.1524-1	e16-1	1.000	-	-	-	no_errors	CLASP1	HGNC	ENSG00000074054	tier1	-	-	46	0	0.00	13	33	71.74
KIAA1161	0	genome.wustl.edu	37	9	34371587	34371587	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	34371587	34371587	C	A	SNP	KIAA1161	ENST00000297625	human	ensembl	74_37	-1	known	missense	c.1253	p.R418L	1.000	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	-	no_errors	KIAA1161	HGNC	ENSG00000164976	tier1	-	-	19	0	0.00	8	5	38.46
PRRC1	0	genome.wustl.edu	37	5	126869406	126869406	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	126869406	126869406	A	T	SNP	PRRC1	ENST00000512635	human	ensembl	74_37	+1	known	missense	c.849	p.L283F	1.000	pfam_NTPase/PRRC1	pfam_NTPase/PRRC1	-	no_errors	PRRC1	HGNC	ENSG00000164244	tier1	-	-	33	0	0.00	7	17	70.83
DMRTC2	0	genome.wustl.edu	37	19	42353311	42353311	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	42353311	42353311	A	T	SNP	DMRTC2	ENST00000269945	human	ensembl	74_37	+1	known	missense	c.742	p.S248C	0.774	NULL	pfam_DM_DNA-bd,superfamily_DM_DNA-bd,smart_DM_DNA-bd,pfscan_DM_DNA-bd	-	no_errors	DMRTC2	HGNC	ENSG00000142025	tier1	-	-	37	0	0.00	15	22	59.46
ATRX	0	genome.wustl.edu	37	X	76939250	76939250	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	X	76939250	76939250	C	-	DEL	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	frame_shift_del	c.1498	p.E500fs	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1			108	0	0.00	67	41	37.96
AOAH	0	genome.wustl.edu	37	7	36552738	36552738	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	7	36552738	36552738	G	A	SNP	AOAH	ENST00000431169	human	ensembl	74_37	-1	putative	missense	c.1967	p.S656F	0.020	NULL	pfam_Lipase_GDSL,pfam_SapB_2,superfamily_Saposin-like,smart_SaposinB,pfscan_SaposinB	-	no_errors	AOAH	HGNC	ENSG00000136250	tier1	-	-	41	0	0.00	27	8	22.86
FRMPD2	0	genome.wustl.edu	37	10	49457093	49457093	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	10	49457093	49457093	T	A	SNP	FRMPD2	ENST00000374201	human	ensembl	74_37	-1	known	missense	c.280	p.S94C	0.000	superfamily_Kinase-like_dom,smart_KIND	pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_PDZ,superfamily_FERM_central,superfamily_Kinase-like_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,pfscan_FERM_domain,pfscan_PDZ,prints_Band_41_fam	-	no_errors	FRMPD2	HGNC	ENSG00000170324	tier1	-	-	30	0	0.00	12	9	42.86
PIWIL1	0	genome.wustl.edu	37	12	130830950	130830950	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	130830950	130830950	C	A	SNP	PIWIL1	ENST00000245255	human	ensembl	74_37	+1	known	missense	c.352	p.H118N	1.000	superfamily_PAZ_dom	pfam_Piwi,pfam_PAZ_dom,pfam_GAGE,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	PIWIL1	HGNC	ENSG00000125207	tier1	-	-	19	0	0.00	8	16	66.67
CELF4	0	genome.wustl.edu	37	18	34839184	34839184	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	18	34839184	34839184	C	T	SNP	CELF4	ENST00000420428	human	ensembl	74_37	-1	known	silent	c.1293	p.E431	1.000	smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CELF4	HGNC	ENSG00000101489	tier1	-	-	16	0	0.00	9	4	30.77
CNTN3	0	genome.wustl.edu	37	3	74350673	74350673	+	Silent	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	3	74350673	74350673	C	T	SNP	CNTN3	ENST00000263665	human	ensembl	74_37	-1	known	silent	c.1971	p.T657	0.001	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN3	HGNC	ENSG00000113805	tier1	rs111626135	GMAF=0.0005	60	0	0.00	48	37	43.53
VNN1	0	genome.wustl.edu	37	6	133013713	133013713	+	Silent	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	133013713	133013713	G	A	SNP	VNN1	ENST00000367928	human	ensembl	74_37	-1	known	silent	c.837	p.I279	0.995	superfamily_C-N_Hydrolase,pirsf_Biotinidase_euk,pfscan_C-N_Hydrolase	pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pirsf_Biotinidase_euk,pfscan_C-N_Hydrolase	-	no_errors	VNN1	HGNC	ENSG00000112299	tier1	-	-	30	0	0.00	17	12	41.38
A4GALT	0	genome.wustl.edu	37	22	43089221	43089221	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	22	43089221	43089221	C	A	SNP	A4GALT	ENST00000249005	human	ensembl	74_37	-1	known	missense	c.737	p.W246L	1.000	pfam_A1-4-GlycosylTfrase_dom	pfam_A1-4-GlycosylTfrase_dom,pfam_GlycoTrfase_DXD_sugar-bd_CS	-	no_errors	A4GALT	HGNC	ENSG00000128274	tier1	-	-	49	0	0.00	48	19	28.36
KCNH6	0	genome.wustl.edu	37	17	61615622	61615622	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	61615622	61615622	C	A	SNP	KCNH6	ENST00000583023	human	ensembl	74_37	+1	known	missense	c.1698	p.N566K	0.996	superfamily_cNMP-bd-like	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_ELK,prints_2pore_dom_K_chnl,pfscan_cNMP-bd_dom	-	no_errors	KCNH6	HGNC	ENSG00000173826	tier1	-	-	50	0	0.00	38	20	34.48
SCFD1	0	genome.wustl.edu	37	14	31107431	31107431	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	31107431	31107431	G	T	SNP	SCFD1	ENST00000458591	human	ensembl	74_37	+1	known	missense	c.413	p.S138I	1.000	pfam_Sec1-like,superfamily_Sec1-like	pfam_Sec1-like,superfamily_Sec1-like	-	no_errors	SCFD1	HGNC	ENSG00000092108	tier1	-	-	54	0	0.00	36	19	34.55
CNTN2	0	genome.wustl.edu	37	1	205042841	205042841	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	205042841	205042841	T	A	SNP	CNTN2	ENST00000331830	human	ensembl	74_37	+1	known	missense	c.3071	p.V1024D	0.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN2	HGNC	ENSG00000184144	tier1	-	-	16	0	0.00	28	7	20.00
MTMR3	0	genome.wustl.edu	37	22	30403122	30403122	+	Missense_Mutation	SNP	G	G	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	22	30403122	30403122	G	C	SNP	MTMR3	ENST00000401950	human	ensembl	74_37	+1	known	missense	c.691	p.V231L	1.000	pfam_Myotubularin-like_Pase_dom	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Tyr_Pase_cat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	MTMR3	HGNC	ENSG00000100330	tier1	-	-	39	0	0.00	23	17	42.50
PGF	0	genome.wustl.edu	37	14	75413611	75413611	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	14	75413611	75413611	A	T	SNP	PGF	ENST00000405431	human	ensembl	74_37	-1	known	missense	c.433	p.F145I	0.005	NULL	pfam_PDGF/VEGF_dom,smart_PDGF/VEGF_dom,pfscan_PDGF/VEGF_dom	-	no_errors	PGF	HGNC	ENSG00000119630	tier1	-	-	57	0	0.00	35	12	25.53
KIAA1009	0	genome.wustl.edu	37	6	84862379	84862379	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	84862379	84862379	C	A	SNP	KIAA1009	ENST00000403245	human	ensembl	74_37	-1	known	missense	c.3514	p.V1172F	1.000	NULL	NULL	-	no_errors	KIAA1009	HGNC	ENSG00000135315	tier1	-	-	68	0	0.00	25	35	58.33
ZNF726	0	genome.wustl.edu	37	19	24116450	24116450	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	24116450	24116450	G	A	SNP	ZNF726	ENST00000322487	human	ensembl	74_37	+1	known	missense	c.1532	p.C511Y	0.093	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF726	HGNC	ENSG00000213967	tier1	-	-	34	0	0.00	22	26	54.17
AZI1	0	genome.wustl.edu	37	17	79170801	79170801	+	Missense_Mutation	SNP	T	T	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	17	79170801	79170801	T	G	SNP	AZI1	ENST00000269392	human	ensembl	74_37	-1	known	missense	c.1711	p.T571P	0.000	NULL	superfamily_t-SNARE	-	no_errors	AZI1	HGNC	ENSG00000141577	tier1	-	-	25	0	0.00	21	16	43.24
KIAA1107	0	genome.wustl.edu	37	1	92645870	92645870	+	Missense_Mutation	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	92645870	92645870	G	A	SNP	KIAA1107	ENST00000409154	human	ensembl	74_37	+1	known	missense	c.1481	p.R494K	0.996	NULL	NULL	-	no_errors	KIAA1107	HGNC	ENSG00000069712	tier1	-	-	48	0	0.00	37	26	41.27
SRSF11	0	genome.wustl.edu	37	1	70687275	70687275	+	RNA	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	70687275	70687275	G	T	SNP	SRSF11	ENST00000469170	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	SRSF11	HGNC	ENSG00000116754	tier1	-	-	140	1	0.71	84	71	45.81
KIF13B	0	genome.wustl.edu	37	8	29005085	29005085	+	Silent	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	29005085	29005085	T	C	SNP	KIF13B	ENST00000524189	human	ensembl	74_37	-1	known	silent	c.1848	p.Q616	0.684	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_CAP-Gly_domain,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_CAP-Gly_domain,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_CAP-Gly_domain,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13B	HGNC	ENSG00000197892	tier1	-	-	43	0	0.00	14	13	48.15
RREB1	0	genome.wustl.edu	37	6	7229608	7229608	+	Missense_Mutation	SNP	G	G	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	7229608	7229608	G	T	SNP	RREB1	ENST00000379938	human	ensembl	74_37	+1	known	missense	c.1276	p.V426F	0.959	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782	tier1	-	-	32	0	0.00	20	21	51.22
BACH1-IT1	0	genome.wustl.edu	37	21	30724127	30724127	+	RNA	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	21	30724127	30724127	A	T	SNP	BACH1-IT1	ENST00000504298	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	BACH1-IT1	HGNC	ENSG00000248476	tier1	-	-	17	0	0.00	11	12	52.17
FAXC	0	genome.wustl.edu	37	6	99771451	99771451	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	6	99771451	99771451	C	A	SNP	FAXC	ENST00000389677	human	ensembl	74_37	-1	known	missense	c.692	p.R231M	1.000	superfamily_Glutathione-S-Trfase_C-like	superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like	-	no_errors	FAXC	HGNC	ENSG00000146267	tier1	-	-	59	0	0.00	33	27	45.00
FLT1	0	genome.wustl.edu	37	13	29001406	29001406	+	Silent	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	13	29001406	29001406	A	G	SNP	FLT1	ENST00000282397	human	ensembl	74_37	-1	known	silent	c.1326	p.A442	0.004	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR1_rcpt	-	no_errors	FLT1	HGNC	ENSG00000102755	tier1	-	-	75	0	0.00	34	13	27.66
GRIN1	0	genome.wustl.edu	37	9	140059498	140059498	+	RNA	SNP	C	C	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	9	140059498	140059498	C	G	SNP	GRIN1	ENST00000471122	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GRIN1	HGNC	ENSG00000176884	tier1	-	-	24	0	0.00	10	6	37.50
MIR3667	0	genome.wustl.edu	37	22	49937064	49937064	+	RNA	SNP	G	G	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	22	49937064	49937064	G	A	SNP	MIR3667	ENST00000581025	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.033	-	-	-	no_errors	MIR3667	HGNC	ENSG00000264139	tier1	-	-	23	0	0.00	8	6	42.86
CYFIP2	0	genome.wustl.edu	37	5	156727882	156727882	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	156727882	156727882	A	T	SNP	CYFIP2	ENST00000318218	human	ensembl	74_37	+1	known	missense	c.547	p.N183Y	1.000	pirsf_Cytoplasmic_FMR1-int_sub	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	-	no_errors	CYFIP2	HGNC	ENSG00000055163	tier1	-	-	35	0	0.00	24	9	27.27
MKRN3	0	genome.wustl.edu	37	15	23812341	23812341	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	23812341	23812341	C	A	SNP	MKRN3	ENST00000314520	human	ensembl	74_37	+1	known	missense	c.1412	p.A471D	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_CCCH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	MKRN3	HGNC	ENSG00000179455	tier1	-	-	128	0	0.00	68	40	37.04
DPEP3	0	genome.wustl.edu	37	16	68009811	68009811	+	Missense_Mutation	SNP	T	T	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	16	68009811	68009811	T	A	SNP	DPEP3	ENST00000268793	human	ensembl	74_37	-1	known	missense	c.1399	p.N467Y	0.000	NULL	pfam_Peptidase_M19	-	no_errors	DPEP3	HGNC	ENSG00000141096	tier1	-	-	121	0	0.00	49	67	57.76
KRTAP10-6	0	genome.wustl.edu	37	21	46011815	46011815	+	Missense_Mutation	SNP	C	C	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	21	46011815	46011815	C	T	SNP	KRTAP10-6	ENST00000400368	human	ensembl	74_37	-1	known	missense	c.551	p.S184N	0.001	NULL	NULL	-	no_errors	KRTAP10-6	HGNC	ENSG00000188155	tier1	-	-	182	1	0.55	143	19	11.73
TRPS1	0	genome.wustl.edu	37	8	116616253	116616253	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	8	116616253	116616253	C	A	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	missense	c.1943	p.S648I	0.948	smart_Znf_C2H2-like	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447	tier1	-	-	103	0	0.00	158	21	11.73
MUC16	0	genome.wustl.edu	37	19	9068479	9068479	+	Missense_Mutation	SNP	A	A	T			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	19	9068479	9068479	A	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.18967	p.S6323T	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	54	0	0.00	39	27	40.91
ZNF334	0	genome.wustl.edu	37	20	45130712	45130712	+	Silent	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	20	45130712	45130712	C	A	SNP	ZNF334	ENST00000347606	human	ensembl	74_37	-1	known	silent	c.1266	p.V422	0.020	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF334	HGNC	ENSG00000198185	tier1	-	-	65	0	0.00	22	25	53.19
UGT3A2	0	genome.wustl.edu	37	5	36039777	36039777	+	Missense_Mutation	SNP	A	A	G			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	5	36039777	36039777	A	G	SNP	UGT3A2	ENST00000282507	human	ensembl	74_37	-1	known	missense	c.877	p.S293P	0.001	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT3A2	HGNC	ENSG00000168671	tier1	-	-	35	0	0.00	5	25	83.33
STARD10	0	genome.wustl.edu	37	11	72492059	72492059	+	Silent	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	11	72492059	72492059	C	A	SNP	STARD10	ENST00000334805	human	ensembl	74_37	-1	known	silent	c.168	p.V56	1.000	pfam_START_lipid-bd_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	pfam_START_lipid-bd_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	-	no_errors	STARD10	HGNC	ENSG00000214530	tier1	-	-	38	0	0.00	6	7	53.85
ZCCHC11	0	genome.wustl.edu	37	1	52937696	52937696	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	1	52937696	52937696	C	A	SNP	ZCCHC11	ENST00000257177	human	ensembl	74_37	-1	known	missense	c.2806	p.D936Y	1.000	superfamily_Znf_CCHC	pfam_PAP_assoc,pfam_Znf_CCHC,pfam_Nucleotidyltransferase,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC11	HGNC	ENSG00000134744	tier1	-	-	75	0	0.00	44	31	41.33
CLEC12B	0	genome.wustl.edu	37	12	10170960	10170960	+	Silent	SNP	T	T	C			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	12	10170960	10170960	T	C	SNP	CLEC12B	ENST00000338896	human	ensembl	74_37	+1	known	silent	c.711	p.N237	1.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_Ly49,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC12B	HGNC	ENSG00000256660	tier1	-	-	61	0	0.00	2	11	84.62
C15orf27	0	genome.wustl.edu	37	15	76448951	76448951	+	Missense_Mutation	SNP	C	C	A			TCGA-HS-A5N9-01A-11D-A26G-09	TCGA-HS-A5N9-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	947be450-5acc-451c-a1d8-94c90b6f05ac	ac335645-b8ee-475a-89ff-8354231cc35c	15	76448951	76448951	C	A	SNP	C15orf27	ENST00000388942	human	ensembl	74_37	+1	known	missense	c.234	p.N78K	1.000	NULL	NULL	-	no_errors	C15orf27	HGNC	ENSG00000169758	tier1	-	-	115	0	0.00	63	54	46.15
