Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ENSG00000260213	0	genome.wustl.edu	37	16	81058170	81058171	+	RNA	INS	-	-	CAACTCAGC			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	16	81058170	81058171	-	CAACTCAGC	INS	ENSG00000260213	ENST00000561808	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.047:0.001	-	-	-	no_errors	RP11-303E16.3	Clone_based_vega_gene	ENSG00000260213	tier1			NA	NA	NA	NA	NA	NA
VASP	0	genome.wustl.edu	37	19	46027364	46027364	+	Missense_Mutation	SNP	G	G	A			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	19	46027364	46027364	G	A	SNP	VASP	ENST00000245932	human	ensembl	74_37	+1	known	missense	c.920	p.R307Q	1.000	pirsf_Vasodilator_phosphoprotein	pirsf_Vasodilator_phosphoprotein,pfam_WH1/EVH1,pfam_VASP_tetra,smart_WH1/EVH1,pfscan_WH1/EVH1	-	no_errors	VASP	HGNC	ENSG00000125753	tier1	-	-	36	0	0.00	30	19	38.78
FARSB	0	genome.wustl.edu	37	2	223497942	223497942	+	Missense_Mutation	SNP	G	G	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	2	223497942	223497942	G	T	SNP	FARSB	ENST00000281828	human	ensembl	74_37	-1	known	missense	c.691	p.L231I	1.000	pfam_B3/B4_tRNA-bd,superfamily_Phe-tRNA_synthase_B3/B4,smart_B3/B4_tRNA-bd,tigrfam_Phe-tRNA-synth_IIc_bsu_arc	pfam_B3/B4_tRNA-bd,pfam_tRNA_synthase_B5-dom,superfamily_DNA-bd_dom_put,superfamily_Phe-tRNA_synthase_B3/B4,smart_B3/B4_tRNA-bd,smart_tRNA_synthase_B5-dom,tigrfam_Phe-tRNA-synth_IIc_bsu_arc	-	no_errors	FARSB	HGNC	ENSG00000116120	tier1	-	-	31	0	0.00	36	4	10.00
ENSG00000242474	0	genome.wustl.edu	37	7	149458	149459	+	RNA	INS	-	-	CTCCT			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	7	149458	149459	-	CTCCT	INS	ENSG00000242474	ENST00000497320	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002:0.001	-	-	-	no_errors	AC093627.9	Clone_based_vega_gene	ENSG00000242474	tier1			NA	NA	NA	NA	NA	NA
TINAG	0	genome.wustl.edu	37	6	54245359	54245359	+	Missense_Mutation	SNP	A	A	G			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	6	54245359	54245359	A	G	SNP	TINAG	ENST00000259782	human	ensembl	74_37	+1	known	missense	c.1286	p.E429G	1.000	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C	pfam_Peptidase_C1A_C,pfam_Somatomedin_B_dom,smart_Somatomedin_B_dom,smart_Peptidase_C1A_C,pfscan_Somatomedin_B_dom	-	no_errors	TINAG	HGNC	ENSG00000137251	tier1	-	-	79	0	0.00	33	19	36.54
TMTC1	0	genome.wustl.edu	37	12	29936515	29936515	+	Missense_Mutation	SNP	A	A	G			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	12	29936515	29936515	A	G	SNP	TMTC1	ENST00000539277	human	ensembl	74_37	-1	putative	missense	c.170	p.I57T	1.000	NULL	pfam_TPR_1,pfam_TPR_2,pfam_DUF1736,pfam_PIK-rel_kinase_FAT,pfam_TPR-3,smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC1	HGNC	ENSG00000133687	tier1	-	-	42	0	0.00	59	11	15.71
ULK4	0	genome.wustl.edu	37	3	41938472	41938472	+	Frame_Shift_Del	DEL	C	C	-			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	3	41938472	41938472	C	-	DEL	ULK4	ENST00000301831	human	ensembl	74_37	-1	known	frame_shift_del	c.1372	p.D458fs	0.998	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ULK4	HGNC	ENSG00000168038	tier1			10	0	0.00	11	8	42.11
RHBG	0	genome.wustl.edu	37	1	156347271	156347271	+	Missense_Mutation	SNP	G	G	A			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	1	156347271	156347271	G	A	SNP	RHBG	ENST00000368246	human	ensembl	74_37	+1	known	missense	c.367	p.V123M	0.298	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	-	no_errors	RHBG	HGNC	ENSG00000132677	tier1	-	-	91	0	0.00	61	36	37.11
CENPF	0	genome.wustl.edu	37	1	214794049	214794049	+	Missense_Mutation	SNP	C	C	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	1	214794049	214794049	C	T	SNP	CENPF	ENST00000366955	human	ensembl	74_37	+1	known	missense	c.625	p.R209W	0.980	pfam_Centromere_CenpF_N	pfam_Centromere_CenpF_N,pfam_Centromere_CenpF_leu-rich_rpt,pfam_CenpF/LEK1_Rb-prot-bd	-	no_errors	CENPF	HGNC	ENSG00000117724	tier1	rs148125567	-	50	0	0.00	34	33	49.25
NIPAL3	0	genome.wustl.edu	37	1	24776053	24776053	+	Silent	SNP	C	C	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	1	24776053	24776053	C	T	SNP	NIPAL3	ENST00000374399	human	ensembl	74_37	+1	known	silent	c.477	p.H159	0.549	pfam_Mg_trans_NIPA	pfam_Mg_trans_NIPA	-	no_errors	NIPAL3	HGNC	ENSG00000001461	tier1	-	-	72	0	0.00	8	36	81.82
DENND2C	0	genome.wustl.edu	37	1	115127989	115127989	+	RNA	DEL	A	A	-			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	1	115127989	115127989	A	-	DEL	DENND2C	ENST00000495031	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DENND2C	HGNC	ENSG00000175984	tier1			17	0	0.00	17	4	19.05
ITPR2	0	genome.wustl.edu	37	12	26839531	26839531	+	Missense_Mutation	SNP	C	C	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	12	26839531	26839531	C	T	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	missense	c.1031	p.R344H	1.000	pfam_MIR_motif,superfamily_MIR_motif,smart_MIR_motif	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104	tier1	-	-	37	0	0.00	27	22	44.90
FAM47E	0	genome.wustl.edu	37	4	77184926	77184926	+	Missense_Mutation	SNP	G	G	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	4	77184926	77184926	G	T	SNP	FAM47E	ENST00000424749	human	ensembl	74_37	+1	known	missense	c.490	p.D164Y	0.980	NULL	superfamily_eIF4G1_eIF4E-bd	-	no_errors	FAM47E	HGNC	ENSG00000189157	tier1	-	-	38	0	0.00	32	4	11.11
VAV3	0	genome.wustl.edu	37	1	108293737	108293737	+	Splice_Site	SNP	A	A	G			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	1	108293737	108293737	A	G	SNP	VAV3	ENST00000370056	human	ensembl	74_37	-1	known	splice_site	c.1259+2	e13+2	1.000	-	-	-	no_errors	VAV3	HGNC	ENSG00000134215	tier1	-	-	39	0	0.00	18	23	56.10
FLJ36000	0	genome.wustl.edu	37	17	21911266	21911267	+	RNA	INS	-	-	TG			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	17	21911266	21911267	-	TG	INS	FLJ36000	ENST00000581223	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004:0.024	-	-	-	no_errors	RP11-744K17.9	Clone_based_vega_gene	ENSG00000266795	tier1			10	0	0.00	10	9	47.37
HLA-DRB6	0	genome.wustl.edu	37	6	32520830	32520844	+	RNA	DEL	AGGAGTCCAGCGCAG	AGGAGTCCAGCGCAG	-			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	AGGAGTCCAGCGCAG	AGGAGTCCAGCGCAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	6	32520830	32520844	AGGAGTCCAGCGCAG	-	DEL	HLA-DRB6	ENST00000411500	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.975:0.991:0.996:0.997:0.995:0.988:0.985:0.943:0.810:0.673:0.530:0.488:0.478:0.468:0.458	-	-	-	no_errors	HLA-DRB6	HGNC	ENSG00000229391	tier1			NA	NA	NA	NA	NA	NA
PTPRS	0	genome.wustl.edu	37	19	5219990	5219990	+	Missense_Mutation	SNP	T	T	C			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	19	5219990	5219990	T	C	SNP	PTPRS	ENST00000372412	human	ensembl	74_37	-1	known	missense	c.3728	p.Y1243C	0.998	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom	-	no_errors	PTPRS	HGNC	ENSG00000105426	tier1	-	-	110	0	0.00	89	14	13.59
ADAMTS17	0	genome.wustl.edu	37	15	100739618	100739618	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	15	100739618	100739618	G	T	SNP	ADAMTS17	ENST00000268070	human	ensembl	74_37	-1	known	nonsense	c.1086	p.Y362*	1.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS17	HGNC	ENSG00000140470	tier1	-	-	52	0	0.00	62	11	15.07
OPN5	0	genome.wustl.edu	37	6	47762984	47762984	+	Missense_Mutation	SNP	G	G	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	6	47762984	47762984	G	T	SNP	OPN5	ENST00000371211	human	ensembl	74_37	+1	known	missense	c.441	p.K147N	0.999	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Peropsin	-	no_errors	OPN5	HGNC	ENSG00000124818	tier1	-	-	51	0	0.00	24	25	50.00
ENSG00000267387	0	genome.wustl.edu	37	19	10200415	10200415	+	RNA	SNP	G	G	C			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	19	10200415	10200415	G	C	SNP	ENSG00000267387	ENST00000589622	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.030	-	-	-	no_errors	CTD-2240E14.4	Clone_based_vega_gene	ENSG00000267387	tier1	-	-	36	0	0.00	29	23	44.23
ENSG00000255384	0	genome.wustl.edu	37	11	118305414	118305414	+	Missense_Mutation	SNP	A	A	G			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	11	118305414	118305414	A	G	SNP	ENSG00000255384	ENST00000532619	human	ensembl	74_37	-1	putative	missense	c.407	p.L136P	0.958	NULL	NULL	-	no_errors	RP11-770J1.4	Clone_based_vega_gene	ENSG00000255384	tier1	-	-	54	0	0.00	45	6	11.76
CYP2C9	0	genome.wustl.edu	37	10	96740982	96740982	+	Missense_Mutation	SNP	G	G	A			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	10	96740982	96740982	G	A	SNP	CYP2C9	ENST00000260682	human	ensembl	74_37	+1	known	missense	c.1004	p.R335Q	0.190	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2C9	HGNC	ENSG00000138109	tier1	-	-	68	0	0.00	37	21	36.21
VPS41	0	genome.wustl.edu	37	7	38813817	38813817	+	Missense_Mutation	SNP	G	G	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	7	38813817	38813817	G	T	SNP	VPS41	ENST00000310301	human	ensembl	74_37	-1	known	missense	c.910	p.L304M	0.990	pirsf_VPS41	pfam_Clathrin_H-chain/VPS_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_VPS41,pfscan_Znf_RING	-	no_errors	VPS41	HGNC	ENSG00000006715	tier1	-	-	50	0	0.00	40	4	9.09
ABCC2	0	genome.wustl.edu	37	10	101591500	101591500	+	Missense_Mutation	SNP	G	G	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	10	101591500	101591500	G	T	SNP	ABCC2	ENST00000370449	human	ensembl	74_37	+1	known	missense	c.3016	p.D1006Y	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC2	HGNC	ENSG00000023839	tier1	-	-	68	0	0.00	44	4	8.33
SNED1	0	genome.wustl.edu	37	2	242007218	242007218	+	Missense_Mutation	SNP	C	C	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	2	242007218	242007218	C	T	SNP	SNED1	ENST00000310397	human	ensembl	74_37	+1	known	missense	c.3050	p.T1017M	0.986	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_EG-like_dom,pfam_Fibronectin_type3,pfam_Nidogen_extracell_dom,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_Fibronectin_type3,superfamily_Sushi_SCR_CCP,smart_Nidogen_extracell_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Fibronectin_type3,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Sushi_SCR_CCP	-	no_errors	SNED1	HGNC	ENSG00000162804	tier1	-	-	40	0	0.00	28	20	41.67
MBNL1	0	genome.wustl.edu	37	3	152017897	152017898	+	RNA	INS	-	-	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	3	152017897	152017898	-	T	INS	MBNL1	ENST00000461436	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.829:0.026	-	-	-	no_errors	MBNL1	HGNC	ENSG00000152601	tier1			15	0	0.00	31	3	8.82
C10orf118	0	genome.wustl.edu	37	10	115923008	115923008	+	Missense_Mutation	SNP	A	A	G			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	10	115923008	115923008	A	G	SNP	C10orf118	ENST00000369287	human	ensembl	74_37	-1	known	missense	c.20	p.I7T	0.000	NULL	superfamily_Prefoldin	-	no_errors	C10orf118	HGNC	ENSG00000165813	tier1	-	-	22	0	0.00	8	11	57.89
MDN1	0	genome.wustl.edu	37	6	90468585	90468585	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	6	90468585	90468585	A	-	DEL	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	frame_shift_del	c.2555	p.L852fs	1.000	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159	tier1			47	0	0.00	19	11	36.67
TMBIM1	0	genome.wustl.edu	37	2	219142143	219142143	+	Missense_Mutation	SNP	C	C	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	2	219142143	219142143	C	T	SNP	TMBIM1	ENST00000258412	human	ensembl	74_37	-1	known	missense	c.585	p.M195I	1.000	pfam_Bax_inhibitor_1-related	pfam_Bax_inhibitor_1-related	-	no_errors	TMBIM1	HGNC	ENSG00000135926	tier1	-	-	36	0	0.00	21	4	16.00
OR14C36	0	genome.wustl.edu	37	1	248512774	248512774	+	Missense_Mutation	SNP	C	C	A			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	1	248512774	248512774	C	A	SNP	OR14C36	ENST00000317861	human	ensembl	74_37	+1	known	missense	c.698	p.T233K	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR14C36	HGNC	ENSG00000177174	tier1	-	-	21	0	0.00	22	10	31.25
STIP1	0	genome.wustl.edu	37	11	63965443	63965443	+	Silent	SNP	G	G	A			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	11	63965443	63965443	G	A	SNP	STIP1	ENST00000305218	human	ensembl	74_37	+1	known	silent	c.1020	p.Q340	0.997	pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,smart_STI1_HS-bd,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	STIP1	HGNC	ENSG00000168439	tier1	-	-	50	0	0.00	42	4	8.70
EIF5	0	genome.wustl.edu	37	14	103800843	103800844	+	RNA	INS	-	-	CTCGGA			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	14	103800843	103800844	-	CTCGGA	INS	EIF5	ENST00000560200	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.096:0.001	-	-	-	no_errors	EIF5	HGNC	ENSG00000100664	tier1			NA	NA	NA	NA	NA	NA
NDUFAF6	0	genome.wustl.edu	37	8	96047806	96047807	+	Splice_Site	INS	-	-	AA			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	8	96047806	96047807	-	AA	INS	NDUFAF6	ENST00000396124	human	ensembl	74_37	+1	known	splice_site_ins	c.420+2_420+1	e3+2	1.000:0.999	-	-	-	no_errors	NDUFAF6	HGNC	ENSG00000156170	tier1			33	0	0.00	42	5	10.64
CTNND1	0	genome.wustl.edu	37	11	57575904	57575904	+	Missense_Mutation	SNP	C	C	G			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	11	57575904	57575904	C	G	SNP	CTNND1	ENST00000399050	human	ensembl	74_37	+1	known	missense	c.2134	p.L712V	1.000	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	CTNND1	HGNC	ENSG00000198561	tier1	-	-	79	0	0.00	48	18	27.27
PRPF8	0	genome.wustl.edu	37	17	1559969	1559969	+	Silent	SNP	G	G	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	17	1559969	1559969	G	T	SNP	PRPF8	ENST00000304992	human	ensembl	74_37	-1	known	silent	c.5592	p.T1864	0.996	pfam_PRP8_domainIV	pfam_PROCN,pfam_PRP8_domainIV,pfam_Prp8_U6-snRNA-bd,pfam_PRO8NT,pfam_Prp8_U5-snRNA-bd,pfam_PROCT,pfam_RRM_spliceosomal_PrP8,pfam_JAB_MPN_dom,superfamily_Cupredoxin,superfamily_Histone-fold,smart_JAB_MPN_dom	-	no_errors	PRPF8	HGNC	ENSG00000174231	tier1	-	-	38	0	0.00	24	4	14.29
NEFM	0	genome.wustl.edu	37	8	24775542	24775542	+	Missense_Mutation	SNP	C	C	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	8	24775542	24775542	C	T	SNP	NEFM	ENST00000221166	human	ensembl	74_37	+1	known	missense	c.2174	p.P725L	0.379	NULL	pfam_IF,pfam_Intermed_filament_DNA-bd,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	NEFM	HGNC	ENSG00000104722	tier1	-	-	32	0	0.00	20	7	25.93
ZNF284	0	genome.wustl.edu	37	19	44590261	44590261	+	Missense_Mutation	SNP	G	G	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	19	44590261	44590261	G	T	SNP	ZNF284	ENST00000421176	human	ensembl	74_37	+1	known	missense	c.630	p.K210N	0.888	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF284	HGNC	ENSG00000186026	tier1	-	-	36	0	0.00	33	4	10.81
PRRT1	0	genome.wustl.edu	37	6	32118219	32118219	+	Missense_Mutation	SNP	C	C	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	6	32118219	32118219	C	T	SNP	PRRT1	ENST00000211413	human	ensembl	74_37	-1	known	missense	c.484	p.G162S	1.000	NULL	pfam_CD225/Dispanin_fam	-	no_errors	PRRT1	HGNC	ENSG00000204314	tier1	-	-	29	0	0.00	10	11	52.38
CTNNA2	0	genome.wustl.edu	37	2	80136835	80136835	+	Missense_Mutation	SNP	C	C	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	2	80136835	80136835	C	T	SNP	CTNNA2	ENST00000361291	human	ensembl	74_37	+1	known	missense	c.1070	p.T357M	1.000	pfam_Vinculin/catenin,prints_Alpha_catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032	tier1	-	-	24	0	0.00	18	18	50.00
TBC1D15	0	genome.wustl.edu	37	12	72287041	72287041	+	Missense_Mutation	SNP	G	G	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	12	72287041	72287041	G	T	SNP	TBC1D15	ENST00000550746	human	ensembl	74_37	+1	known	missense	c.594	p.Q198H	1.000	pfam_DUF3548	pfam_DUF3548,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D15	HGNC	ENSG00000121749	tier1	-	-	30	0	0.00	18	3	14.29
ADC	0	genome.wustl.edu	37	1	33585656	33585656	+	Missense_Mutation	SNP	G	G	A			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	1	33585656	33585656	G	A	SNP	ADC	ENST00000373441	human	ensembl	74_37	+1	known	missense	c.1316	p.R439Q	0.068	superfamily_Ala_racemase/Decarboxylase_C	pfam_De-COase2_N,pfam_De-COase2_C,superfamily_Ala_racemase/Decarboxylase_C,prints_Orn_de-COase,prints_Orn/DAP/Arg_de-COase	-	no_errors	ADC	HGNC	ENSG00000142920	tier1	-	-	49	0	0.00	21	17	44.74
PCDHB7	0	genome.wustl.edu	37	5	140553042	140553042	+	Missense_Mutation	SNP	G	G	A			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	5	140553042	140553042	G	A	SNP	PCDHB7	ENST00000231137	human	ensembl	74_37	+1	known	missense	c.626	p.S209N	0.018	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB7	HGNC	ENSG00000113212	tier1	-	-	55	0	0.00	61	6	8.96
YAP1	0	genome.wustl.edu	37	11	101985018	101985018	+	Silent	SNP	C	C	G			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	11	101985018	101985018	C	G	SNP	YAP1	ENST00000282441	human	ensembl	74_37	+1	known	silent	c.465	p.P155	0.000	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	YAP1	HGNC	ENSG00000137693	tier1	rs143682472	-	58	0	0.00	52	5	8.77
BTC	0	genome.wustl.edu	37	4	75673316	75673317	+	In_Frame_Ins	INS	-	-	TTCTTCTTCTTCTTCTTC			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	4	75673316	75673317	-	TTCTTCTTCTTCTTCTTC	INS	BTC	ENST00000395743	human	ensembl	74_37	-1	known	in_frame_ins	c.472_471	p.157in_frame_insEEEEEE	1.000:1.000	NULL	pfscan_EG-like_dom	-	no_errors	BTC	HGNC	ENSG00000174808	tier1			NA	NA	NA	NA	NA	NA
PDHA2	0	genome.wustl.edu	37	4	96761780	96761780	+	Missense_Mutation	SNP	G	G	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	4	96761780	96761780	G	T	SNP	PDHA2	ENST00000295266	human	ensembl	74_37	+1	known	missense	c.479	p.G160V	1.000	pfam_DH_E1,tigrfam_Pyrv_DH_E1_asu_subgrp-y	pfam_DH_E1,tigrfam_Pyrv_DH_E1_asu_subgrp-y	-	no_errors	PDHA2	HGNC	ENSG00000163114	tier1	-	-	51	0	0.00	37	14	27.45
SLC31A2	0	genome.wustl.edu	37	9	115920344	115920344	+	Missense_Mutation	SNP	A	A	G			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	9	115920344	115920344	A	G	SNP	SLC31A2	ENST00000374220	human	ensembl	74_37	+1	known	missense	c.94	p.R32G	0.028	NULL	NULL	-	no_errors	SLC31A2	HGNC	ENSG00000136867	tier1	-	-	23	0	0.00	16	5	23.81
FLJ22184	0	genome.wustl.edu	37	19	7935863	7935863	+	Missense_Mutation	SNP	G	G	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	19	7935863	7935863	G	T	SNP	FLJ22184	ENST00000539422	human	ensembl	74_37	-1	known	missense	c.2267	p.P756H	0.136	NULL	NULL	-	no_errors	CTD-3193O13.9	Clone_based_vega_gene	ENSG00000183248	tier1	rs5027409	-	28	0	0.00	37	6	13.95
ENSG00000221060	0	genome.wustl.edu	37	14	70270922	70270922	+	RNA	DEL	T	T	-			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	14	70270922	70270922	T	-	DEL	ENSG00000221060	ENST00000408133	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.003	-	-	-	no_errors	SNORA11	RFAM	ENSG00000221060	tier1			11	0	0.00	13	2	13.33
GFRAL	0	genome.wustl.edu	37	6	55263988	55263988	+	Silent	SNP	C	C	A			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	6	55263988	55263988	C	A	SNP	GFRAL	ENST00000340465	human	ensembl	74_37	+1	known	silent	c.963	p.T321	0.000	NULL	pfam_GDNF/GAS1,smart_GDNF/GAS1	-	no_errors	GFRAL	HGNC	ENSG00000187871	tier1	-	-	45	0	0.00	51	5	8.93
HS3ST6	0	genome.wustl.edu	37	16	1962101	1962101	+	Missense_Mutation	SNP	G	G	T			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	16	1962101	1962101	G	T	SNP	HS3ST6	ENST00000293937	human	ensembl	74_37	-1	known	missense	c.519	p.D173E	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST6	HGNC	ENSG00000162040	tier1	-	-	95	0	0.00	66	51	43.59
ELF3	0	genome.wustl.edu	37	1	201981253	201981253	+	Missense_Mutation	SNP	G	G	A			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	1	201981253	201981253	G	A	SNP	ELF3	ENST00000359651	human	ensembl	74_37	+1	known	missense	c.332	p.R111H	0.951	pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ELF3	HGNC	ENSG00000163435	tier1	-	-	39	0	0.00	38	25	39.68
ENSG00000254665	0	genome.wustl.edu	37	11	8715262	8715263	+	RNA	INS	-	-	CAGG			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	11	8715262	8715263	-	CAGG	INS	ENSG00000254665	ENST00000529883	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007:0.136	-	-	-	no_errors	RP11-152H18.3	Clone_based_vega_gene	ENSG00000254665	tier1			10	0	0.00	9	6	40.00
PADI1	0	genome.wustl.edu	37	1	17555167	17555167	+	Missense_Mutation	SNP	C	C	A			TCGA-IF-A4AK-01A-21D-A24N-09	TCGA-IF-A4AK-11A-11D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8268090-df42-4320-b19f-48c377fac5d9	3a65b90b-a76d-441f-bf6e-bf3198d92685	1	17555167	17555167	C	A	SNP	PADI1	ENST00000375471	human	ensembl	74_37	+1	known	missense	c.700	p.L234M	0.008	pfam_Prot_Arg_deaminase_cen_dom,superfamily_Prot_Arg_deaminase_cen_dom,pirsf_Protein-arginine_deiminase_sub	pfam_PAD_C,pfam_Prot_Arg_deaminase_cen_dom,pfam_PAD_N,superfamily_Prot_Arg_deaminase_cen_dom,superfamily_Cupredoxin,pirsf_Protein-arginine_deiminase_sub	-	no_errors	PADI1	HGNC	ENSG00000142623	tier1	-	-	74	0	0.00	10	37	78.72
