Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
TP53	0	genome.wustl.edu	37	17	7578235	7578235	+	Missense_Mutation	SNP	T	T	C			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	17	7578235	7578235	T	C	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.614	p.Y205C	0.989	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	58	0	0.00	12	38	76.00
ZNF568	0	genome.wustl.edu	37	19	37488408	37488408	+	Silent	SNP	A	A	G			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	19	37488408	37488408	A	G	SNP	ZNF568	ENST00000455427	human	ensembl	74_37	+1	known	silent	c.1623	p.E541	0.002	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF568	HGNC	ENSG00000198453	tier1	-	-	73	0	0.00	125	11	8.09
KCNC2	0	genome.wustl.edu	37	12	75444697	75444697	+	Missense_Mutation	SNP	C	C	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	12	75444697	75444697	C	T	SNP	KCNC2	ENST00000549446	human	ensembl	74_37	-1	known	missense	c.1088	p.R363H	1.000	pfam_Ion_trans_dom,prints_K_chnl,prints_K_chnl_volt-dep_Kv	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNC2	HGNC	ENSG00000166006	tier1	-	-	17	0	0.00	8	6	42.86
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	tier1	rs121913279	-	19	0	0.00	1	41	97.62
NKAPL	0	genome.wustl.edu	37	6	28227274	28227274	+	Missense_Mutation	SNP	G	G	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	6	28227274	28227274	G	A	SNP	NKAPL	ENST00000343684	human	ensembl	74_37	+1	known	missense	c.125	p.R42H	0.000	NULL	pfam_DUF926	-	no_errors	NKAPL	HGNC	ENSG00000189134	tier1	-	-	28	0	0.00	26	31	54.39
TMEM44	0	genome.wustl.edu	37	3	194317814	194317815	+	RNA	INS	-	-	GCGTGCACACACCCACATGCACAC			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	3	194317814	194317815	-	GCGTGCACACACCCACATGCACAC	INS	TMEM44	ENST00000467284	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	TMEM44	HGNC	ENSG00000145014	tier1			NA	NA	NA	NA	NA	NA
CYFIP2	0	genome.wustl.edu	37	5	156810368	156810368	+	Splice_Site	SNP	G	G	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	5	156810368	156810368	G	A	SNP	CYFIP2	ENST00000318218	human	ensembl	74_37	+1	known	splice_site	c.3282+1	e29+1	1.000	-	-	-	no_errors	CYFIP2	HGNC	ENSG00000055163	tier1	-	-	36	0	0.00	29	10	25.64
ZFHX4	0	genome.wustl.edu	37	8	77766738	77766738	+	Silent	SNP	G	G	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	8	77766738	77766738	G	A	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	silent	c.7581	p.P2527	0.850	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	17	0	0.00	15	15	50.00
MUC4	0	genome.wustl.edu	37	3	195509535	195509535	+	Silent	SNP	A	A	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	3	195509535	195509535	A	T	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	silent	c.8916	p.G2972	0.001	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	-	-	114	0	0.00	80	16	16.33
MUC4	0	genome.wustl.edu	37	3	195509553	195509553	+	Silent	SNP	A	A	G			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	3	195509553	195509553	A	G	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	silent	c.8898	p.T2966	0.705	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	-	-	112	1	0.88	90	12	11.76
LINC00905	0	genome.wustl.edu	37	19	16145448	16145448	+	RNA	SNP	G	G	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	19	16145448	16145448	G	A	SNP	LINC00905	ENST00000588117	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.080	-	-	-	no_errors	LINC00905	HGNC	ENSG00000167459	tier1	-	-	23	0	0.00	32	5	13.51
AXIN2	0	genome.wustl.edu	37	17	63533137	63533137	+	Missense_Mutation	SNP	G	G	C			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	17	63533137	63533137	G	C	SNP	AXIN2	ENST00000307078	human	ensembl	74_37	-1	known	missense	c.1757	p.T586R	0.043	NULL	pfam_DIX,pfam_RGS_dom,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	AXIN2	HGNC	ENSG00000168646	tier1	-	-	8	0	0.00	11	9	45.00
MT-CO1	0	genome.wustl.edu	37	MT	6874	6874	+	Missense_Mutation	SNP	T	T	C			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	MT	6874	6874	T	C	SNP	MT-CO1	ENST00000361624	human	ensembl	74_37	+1	known	missense	c.971	p.L324P	NULL	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom,prints_Cyt_c_Oxase_su1	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom,prints_Cyt_c_Oxase_su1	-	no_errors	MT-CO1	HGNC	ENSG00000198804	tier1	-	-	44	0	0.00	1	21	95.45
FAM27E2	0	genome.wustl.edu	37	9	45733681	45733681	+	Missense_Mutation	SNP	T	T	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	9	45733681	45733681	T	A	SNP	FAM27E2	ENST00000377529	human	ensembl	74_37	+1	known	missense	c.94	p.L32M	0.038	NULL	NULL	-	no_errors	FAM27E2	HGNC	ENSG00000204807	tier1	rs146523101	-	55	0	0.00	10	6	37.50
CPT2	0	genome.wustl.edu	37	1	53666452	53666452	+	Silent	SNP	T	T	C			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	1	53666452	53666452	T	C	SNP	CPT2	ENST00000371486	human	ensembl	74_37	+1	known	silent	c.214	p.L72	0.983	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT2	HGNC	ENSG00000157184	tier1	-	-	114	0	0.00	47	96	67.13
SHPRH	0	genome.wustl.edu	37	6	146268768	146268768	+	Missense_Mutation	SNP	T	T	C			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	6	146268768	146268768	T	C	SNP	SHPRH	ENST00000367503	human	ensembl	74_37	-1	known	missense	c.1073	p.E358G	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_Helicase_ATP-bd	pfam_SNF2_N,pfam_Histone_H1/H5_H15,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,superfamily_WW_dom,smart_Helicase_ATP-bd,smart_Histone_H1/H5_H15,smart_Znf_PHD,smart_Znf_RING,smart_Helicase_C,pfscan_Znf_RING,pfscan_Helicase_C	-	no_errors	SHPRH	HGNC	ENSG00000146414	tier1	-	-	20	0	0.00	22	21	48.84
MIR4477B	0	genome.wustl.edu	37	9	68415353	68415353	+	RNA	SNP	T	T	G			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	9	68415353	68415353	T	G	SNP	MIR4477B	ENST00000581659	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.189	-	-	-	no_errors	MIR4477B	HGNC	ENSG00000266017	tier1	rs71242635	-	23	0	0.00	14	4	22.22
GGT7	0	genome.wustl.edu	37	20	33432915	33432916	+	RNA	INS	-	-	CACCAC			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	20	33432915	33432916	-	CACCAC	INS	GGT7	ENST00000469018	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.062:0.008	-	-	-	no_errors	GGT7	HGNC	ENSG00000131067	tier1			NA	NA	NA	NA	NA	NA
RN7SKP189	0	genome.wustl.edu	37	X	144138832	144138832	+	RNA	SNP	C	C	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	X	144138832	144138832	C	T	SNP	RN7SKP189	ENST00000365042	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RN7SKP189	HGNC	ENSG00000201912	tier1	-	-	8	0	0.00	3	6	66.67
RAD54L2	0	genome.wustl.edu	37	3	51667774	51667774	+	Missense_Mutation	SNP	C	C	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	3	51667774	51667774	C	T	SNP	RAD54L2	ENST00000409535	human	ensembl	74_37	+1	known	missense	c.1007	p.P336L	1.000	pfam_SNF2_N,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	RAD54L2	HGNC	ENSG00000164080	tier1	-	-	48	0	0.00	4	23	85.19
INTS4	0	genome.wustl.edu	37	11	77629981	77629981	+	Missense_Mutation	SNP	A	A	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	11	77629981	77629981	A	T	SNP	INTS4	ENST00000534064	human	ensembl	74_37	-1	known	missense	c.1808	p.I603N	0.065	NULL	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	INTS4	HGNC	ENSG00000149262	tier1	-	-	106	0	0.00	69	17	19.77
CHD2	0	genome.wustl.edu	37	15	93482893	93482893	+	Missense_Mutation	SNP	G	G	C			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	15	93482893	93482893	G	C	SNP	CHD2	ENST00000420239	human	ensembl	74_37	+1	known	missense	c.637	p.D213H	1.000	NULL	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CHD2	HGNC	ENSG00000173575	tier1	-	-	82	0	0.00	25	76	75.25
ZNF777	0	genome.wustl.edu	37	7	149153007	149153007	+	Missense_Mutation	SNP	C	C	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	7	149153007	149153007	C	A	SNP	ZNF777	ENST00000247930	human	ensembl	74_37	-1	known	missense	c.107	p.R36L	0.015	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF777	HGNC	ENSG00000196453	tier1	-	-	15	0	0.00	1	7	87.50
MADCAM1	0	genome.wustl.edu	37	19	501786	501786	+	Missense_Mutation	SNP	C	C	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	19	501786	501786	C	A	SNP	MADCAM1	ENST00000215637	human	ensembl	74_37	+1	known	missense	c.785	p.P262Q	0.000	NULL	pfam_Adhes-Ig-like,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	MADCAM1	HGNC	ENSG00000099866	tier1	rs77264553	-	16	0	0.00	19	5	20.83
LAMA5	0	genome.wustl.edu	37	20	60888027	60888027	+	Missense_Mutation	SNP	C	C	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	20	60888027	60888027	C	T	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.8995	p.V2999M	0.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702	tier1	-	-	47	0	0.00	35	31	46.97
MIR4477B	0	genome.wustl.edu	37	9	68415322	68415322	+	RNA	SNP	A	A	G			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	9	68415322	68415322	A	G	SNP	MIR4477B	ENST00000581659	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.207	-	-	-	no_errors	MIR4477B	HGNC	ENSG00000266017	tier1	rs139133717	-	25	0	0.00	10	4	28.57
EXOC3	0	genome.wustl.edu	37	5	443336	443374	+	RNA	DEL	GGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC	GGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC	-			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	GGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC	GGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	5	443336	443374	GGCGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC	-	DEL	EXOC3	ENST00000510441	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.044:0.469:0.513:0.560:0.594:0.546:0.469:0.344:0.297:0.251:0.205:0.159:0.113:0.068:0.023:0.018:0.018:0.007:0.000:0.000:0.000:0.083:0.171:0.290:0.294:0.302:0.252:0.182:0.138:0.004:0.005:0.010:0.011:0.023:0.025:0.016:0.013:0.006:0.002	-	-	-	no_errors	EXOC3	HGNC	ENSG00000180104	tier1			NA	NA	NA	NA	NA	NA
ECT2	0	genome.wustl.edu	37	3	172474880	172474880	+	Silent	SNP	C	C	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	3	172474880	172474880	C	T	SNP	ECT2	ENST00000427830	human	ensembl	74_37	+1	known	silent	c.318	p.V106	0.997	NULL	pfam_DH-domain,pfam_BRCT_dom,superfamily_DH-domain,superfamily_BRCT_dom,smart_BRCT_dom,smart_DH-domain,pfscan_BRCT_dom,pfscan_DH-domain	-	no_errors	ECT2	HGNC	ENSG00000114346	tier1	-	-	53	0	0.00	89	31	25.83
CUL7	0	genome.wustl.edu	37	6	43006382	43006385	+	Frame_Shift_Del	DEL	TGTC	TGTC	-			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	TGTC	TGTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	6	43006382	43006385	TGTC	-	DEL	CUL7	ENST00000535468	human	ensembl	74_37	-1	known	frame_shift_del	c.4741_4738	p.D1580fs	0.000:0.000:0.119:0.159	pfam_Cullin_N,superfamily_Cullin_homology,pfscan_Cullin_homology	pfam_Cullin_N,pfam_CPH_domain,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL7	HGNC	ENSG00000044090	tier1			10	0	0.00	14	9	39.13
ANKRD12	0	genome.wustl.edu	37	18	9255635	9255635	+	Missense_Mutation	SNP	G	G	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	18	9255635	9255635	G	T	SNP	ANKRD12	ENST00000262126	human	ensembl	74_37	+1	known	missense	c.2370	p.M790I	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD12	HGNC	ENSG00000101745	tier1	-	-	13	0	0.00	7	12	63.16
DCLK1	0	genome.wustl.edu	37	13	36445375	36445375	+	Missense_Mutation	SNP	G	G	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	13	36445375	36445375	G	T	SNP	DCLK1	ENST00000360631	human	ensembl	74_37	-1	known	missense	c.926	p.A309D	0.998	NULL	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK1	HGNC	ENSG00000133083	tier1	-	-	54	0	0.00	32	16	33.33
ACTRT1	0	genome.wustl.edu	37	X	127185556	127185556	+	Silent	SNP	G	G	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	X	127185556	127185556	G	A	SNP	ACTRT1	ENST00000371124	human	ensembl	74_37	-1	known	silent	c.630	p.A210	0.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT1	HGNC	ENSG00000123165	tier1	-	-	71	0	0.00	20	51	71.83
PRTG	0	genome.wustl.edu	37	15	55976085	55976085	+	Missense_Mutation	SNP	C	C	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	15	55976085	55976085	C	T	SNP	PRTG	ENST00000389286	human	ensembl	74_37	-1	known	missense	c.442	p.E148K	0.996	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	PRTG	HGNC	ENSG00000166450	tier1	-	-	29	0	0.00	23	3	11.54
MUC4	0	genome.wustl.edu	37	3	195506590	195506590	+	Missense_Mutation	SNP	G	G	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	3	195506590	195506590	G	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.11861	p.P3954L	0.078	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	rs199621200	-	122	1	0.80	56	10	15.15
BAI3	0	genome.wustl.edu	37	6	69348841	69348841	+	Missense_Mutation	SNP	C	C	G			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	6	69348841	69348841	C	G	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	missense	c.274	p.H92D	1.000	pfscan_CUB_dom	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298	tier1	-	-	38	0	0.00	28	7	20.00
MAP3K9	0	genome.wustl.edu	37	14	71199867	71199867	+	Missense_Mutation	SNP	T	T	C			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	14	71199867	71199867	T	C	SNP	MAP3K9	ENST00000555993	human	ensembl	74_37	-1	known	missense	c.2261	p.K754R	1.000	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_Regulat_G_prot_signal_superfam,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MAP3K9	HGNC	ENSG00000006432	tier1	-	-	20	0	0.00	28	16	36.36
LINC00955	0	genome.wustl.edu	37	4	3589656	3589669	+	Frame_Shift_Del	DEL	ACTCCCAGATGCAG	ACTCCCAGATGCAG	-			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	ACTCCCAGATGCAG	ACTCCCAGATGCAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	4	3589656	3589669	ACTCCCAGATGCAG	-	DEL	LINC00955	ENST00000514422	human	ensembl	74_37	+1	novel	frame_shift_del	c.24_37	p.D11fs	0.086:0.080:0.080:0.088:0.143:0.156:0.154:0.145:0.135:0.135:0.134:0.130:0.136:0.162	NULL	NULL	-	no_errors	LINC00955	HGNC	ENSG00000216560	tier1			NA	NA	NA	NA	NA	NA
RGL1	0	genome.wustl.edu	37	1	183881229	183881229	+	Missense_Mutation	SNP	T	T	C			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	1	183881229	183881229	T	C	SNP	RGL1	ENST00000304685	human	ensembl	74_37	+1	known	missense	c.1681	p.S561P	0.853	superfamily_Ras_GEF_dom	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_Ras-assoc,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RGL1	HGNC	ENSG00000143344	tier1	-	-	46	0	0.00	55	8	12.70
PBX2P1	0	genome.wustl.edu	37	3	142897208	142897210	+	RNA	DEL	TTG	TTG	-			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	TTG	TTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	3	142897208	142897210	TTG	-	DEL	PBX2P1	ENST00000560287	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007:0.006:0.006	-	-	-	no_errors	PBX2P1	HGNC	ENSG00000244171	tier1			8	0	0.00	12	12	50.00
ENSG00000268573	0	genome.wustl.edu	37	18	32862463	32862467	+	RNA	DEL	TTTAT	TTTAT	-			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	TTTAT	TTTAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	18	32862463	32862467	TTTAT	-	DEL	ENSG00000268573	ENST00000586922	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.018:0.019:0.019:0.018:0.020	-	-	-	no_errors	RP11-158H5.7	Clone_based_vega_gene	ENSG00000268573	tier1			NA	NA	NA	NA	NA	NA
LSS	0	genome.wustl.edu	37	21	47635208	47635208	+	Silent	SNP	G	G	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	21	47635208	47635208	G	A	SNP	LSS	ENST00000356396	human	ensembl	74_37	-1	known	silent	c.897	p.L299	0.370	superfamily_Terpenoid_cyclase/PrenylTrfase,tigrfam_Squalene_cyclase	pfam_Prenyltrans,superfamily_Terpenoid_cyclase/PrenylTrfase,tigrfam_Squalene_cyclase	-	no_errors	LSS	HGNC	ENSG00000160285	tier1	-	-	57	0	0.00	14	22	61.11
GCNT2	0	genome.wustl.edu	37	6	10629469	10629469	+	RNA	SNP	A	A	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	6	10629469	10629469	A	T	SNP	GCNT2	ENST00000397423	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	GCNT2	HGNC	ENSG00000111846	tier1	-	-	47	0	0.00	66	18	21.18
LTBP1	0	genome.wustl.edu	37	2	33589422	33589422	+	Silent	SNP	C	C	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	2	33589422	33589422	C	T	SNP	LTBP1	ENST00000354476	human	ensembl	74_37	+1	known	silent	c.4542	p.N1514	0.998	NULL	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP1	HGNC	ENSG00000049323	tier1	-	-	44	0	0.00	53	29	35.37
ITPK1	0	genome.wustl.edu	37	14	93483134	93483134	+	Missense_Mutation	SNP	G	G	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	14	93483134	93483134	G	A	SNP	ITPK1	ENST00000267615	human	ensembl	74_37	-1	known	missense	c.133	p.R45W	1.000	pfam_Inositol_tetrakis-P_1-kinase	pfam_Inositol_tetrakis-P_1-kinase	-	no_errors	ITPK1	HGNC	ENSG00000100605	tier1	-	-	24	0	0.00	24	20	45.45
FAM95B1	0	genome.wustl.edu	37	9	42472104	42472104	+	RNA	SNP	C	C	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	9	42472104	42472104	C	T	SNP	FAM95B1	ENST00000592873	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	FAM95B1	HGNC	ENSG00000223839	tier1	-	-	146	1	0.68	73	7	8.75
TTC37	0	genome.wustl.edu	37	5	94864706	94864706	+	Silent	SNP	T	T	C			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	5	94864706	94864706	T	C	SNP	TTC37	ENST00000358746	human	ensembl	74_37	-1	known	silent	c.993	p.Q331	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC37	HGNC	ENSG00000198677	tier1	-	-	27	0	0.00	10	19	65.52
NAV2	0	genome.wustl.edu	37	11	20119223	20119224	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	11	20119223	20119224	AA	-	DEL	NAV2	ENST00000396087	human	ensembl	74_37	+1	known	frame_shift_del	c.6290_6291	p.E2097fs	1.000:1.000	NULL	pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV2	HGNC	ENSG00000166833	tier1			103	0	0.00	100	21	17.36
YIPF7	0	genome.wustl.edu	37	4	44626623	44626623	+	Silent	SNP	T	T	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	4	44626623	44626623	T	A	SNP	YIPF7	ENST00000332990	human	ensembl	74_37	-1	known	silent	c.675	p.S225	0.331	pfam_Yip1	pfam_Yip1	-	no_errors	YIPF7	HGNC	ENSG00000177752	tier1	-	-	22	0	0.00	3	14	82.35
PBX2P1	0	genome.wustl.edu	37	3	142897134	142897136	+	RNA	DEL	TTT	TTT	-			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	3	142897134	142897136	TTT	-	DEL	PBX2P1	ENST00000560287	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.986:0.988:0.989	-	-	-	no_errors	PBX2P1	HGNC	ENSG00000244171	tier1			39	0	0.00	39	7	15.22
OR8G5	0	genome.wustl.edu	37	11	124135362	124135362	+	Missense_Mutation	SNP	T	T	G			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	11	124135362	124135362	T	G	SNP	OR8G5	ENST00000524943	human	ensembl	74_37	+1	known	missense	c.640	p.C214G	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8G5	HGNC	ENSG00000255298	tier1	-	-	71	0	0.00	8	45	84.91
PLEKHA4	0	genome.wustl.edu	37	19	49362197	49362197	+	Missense_Mutation	SNP	G	G	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	19	49362197	49362197	G	A	SNP	PLEKHA4	ENST00000263265	human	ensembl	74_37	-1	known	missense	c.892	p.R298C	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA4	HGNC	ENSG00000105559	tier1	-	-	29	0	0.00	22	17	43.59
ILVBL	0	genome.wustl.edu	37	19	15235791	15235791	+	Missense_Mutation	SNP	G	G	C			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	19	15235791	15235791	G	C	SNP	ILVBL	ENST00000263383	human	ensembl	74_37	-1	known	missense	c.80	p.A27G	0.746	NULL	pfam_Thiamin_PyroP_enz_TPP-bd_dom,pfam_TPP_enzyme-bd_C,pfam_Thiamin_PyroP_enz_cen_dom	-	no_errors	ILVBL	HGNC	ENSG00000105135	tier1	-	-	33	0	0.00	23	6	20.69
KAT6B	0	genome.wustl.edu	37	10	76735646	76735646	+	Silent	SNP	C	C	G			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	10	76735646	76735646	C	G	SNP	KAT6B	ENST00000287239	human	ensembl	74_37	+1	known	silent	c.1551	p.P517	1.000	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,pfam_Histone_H1/H5_H15,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6B	HGNC	ENSG00000156650	tier1	-	-	71	0	0.00	25	53	67.95
ENSG00000227082	0	genome.wustl.edu	37	1	121138853	121138853	+	RNA	SNP	G	G	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	1	121138853	121138853	G	A	SNP	ENSG00000227082	ENST00000417218	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.951	-	-	-	no_errors	AL592494.5	Clone_based_vega_gene	ENSG00000227082	tier1	rs184767318	-	15	0	0.00	9	5	35.71
ABCC11	0	genome.wustl.edu	37	16	48234247	48234247	+	Silent	SNP	C	C	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	16	48234247	48234247	C	T	SNP	ABCC11	ENST00000356608	human	ensembl	74_37	-1	known	silent	c.2022	p.E674	0.959	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC11	HGNC	ENSG00000121270	tier1	-	-	77	0	0.00	70	10	12.50
ENSG00000259605	0	genome.wustl.edu	37	19	46273040	46273042	+	RNA	DEL	AAT	AAT	-			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	AAT	AAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	19	46273040	46273042	AAT	-	DEL	ENSG00000259605	ENST00000592217	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000:1.000	-	-	-	no_errors	AC074212.5	Clone_based_vega_gene	ENSG00000259605	tier1			100	0	0.00	64	30	31.91
GIN1	0	genome.wustl.edu	37	5	102440484	102440484	+	Missense_Mutation	SNP	G	G	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	5	102440484	102440484	G	A	SNP	GIN1	ENST00000399004	human	ensembl	74_37	-1	known	missense	c.400	p.L134F	0.513	superfamily_RNaseH-like_dom	pfam_Integrase_cat-core,pfam_Znf_H2C2_histone_UAS-bd,superfamily_RNaseH-like_dom,pfscan_Integrase_cat-core	-	no_errors	GIN1	HGNC	ENSG00000145723	tier1	-	-	35	0	0.00	38	5	11.63
AMY2B	0	genome.wustl.edu	37	1	104115829	104115829	+	Missense_Mutation	SNP	G	G	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	1	104115829	104115829	G	T	SNP	AMY2B	ENST00000361355	human	ensembl	74_37	+1	known	missense	c.460	p.G154C	0.979	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY2B	HGNC	ENSG00000240038	tier1	-	-	221	0	0.00	211	72	25.35
CCDC62	0	genome.wustl.edu	37	12	123286397	123286397	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	12	123286397	123286397	A	-	DEL	CCDC62	ENST00000253079	human	ensembl	74_37	+1	known	frame_shift_del	c.1704	p.S569fs	0.000	NULL	superfamily_Prefoldin	-	no_errors	CCDC62	HGNC	ENSG00000130783	tier1			52	0	0.00	53	8	13.11
FAM83A	0	genome.wustl.edu	37	8	124219460	124219460	+	Silent	SNP	G	G	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	8	124219460	124219460	G	A	SNP	FAM83A	ENST00000318462	human	ensembl	74_37	+1	known	silent	c.837	p.V279	0.993	pfam_DUF1669	pfam_DUF1669	-	no_errors	FAM83A	HGNC	ENSG00000147689	tier1	-	-	39	0	0.00	66	9	12.00
NXF4	0	genome.wustl.edu	37	X	101822851	101822851	+	RNA	SNP	C	C	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	X	101822851	101822851	C	T	SNP	NXF4	ENST00000360035	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.303	-	-	-	no_errors	NXF4	HGNC	ENSG00000196970	tier1	-	-	142	0	0.00	106	15	12.40
HUWE1	0	genome.wustl.edu	37	X	53657850	53657850	+	RNA	SNP	C	C	G			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	X	53657850	53657850	C	G	SNP	HUWE1	ENST00000471676	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	HUWE1	HGNC	ENSG00000086758	tier1	-	-	92	0	0.00	76	9	10.59
GDF10	0	genome.wustl.edu	37	10	48429409	48429409	+	Silent	SNP	G	G	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	10	48429409	48429409	G	T	SNP	GDF10	ENST00000224605	human	ensembl	74_37	-1	known	silent	c.477	p.G159	0.987	pirsf_BMP3/GDF10	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,pirsf_BMP3/GDF10	-	no_errors	GDF10	HGNC	ENSG00000107623	tier1	-	-	12	0	0.00	0	15	100.00
ESPNL	0	genome.wustl.edu	37	2	239040214	239040214	+	Silent	SNP	C	C	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	2	239040214	239040214	C	T	SNP	ESPNL	ENST00000343063	human	ensembl	74_37	+1	known	silent	c.2859	p.H953	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ESPNL	HGNC	ENSG00000144488	tier1	-	-	20	0	0.00	9	8	47.06
OLA1	0	genome.wustl.edu	37	2	175006589	175006601	+	Frame_Shift_Del	DEL	AGCCACCTTTTCT	AGCCACCTTTTCT	-			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	AGCCACCTTTTCT	AGCCACCTTTTCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	2	175006589	175006601	AGCCACCTTTTCT	-	DEL	OLA1	ENST00000284719	human	ensembl	74_37	-1	known	frame_shift_del	c.513_501	p.E168fs	0.999:1.000:1.000:1.000:1.000:0.999:0.969:1.000:1.000:1.000:1.000:1.000:1.000	superfamily_P-loop_NTPase,pirsf_CHP00092,tigrfam_CHP00092	pfam_DUF933,pfam_GTP_binding_domain,pfam_Fe2_transport_prot_B_N,superfamily_P-loop_NTPase,superfamily_TGS-like,pirsf_CHP00092,prints_GTP_binding_domain,tigrfam_CHP00092	-	no_errors	OLA1	HGNC	ENSG00000138430	tier1			NA	NA	NA	NA	NA	NA
ZNF595	0	genome.wustl.edu	37	4	87460	87460	+	RNA	SNP	G	G	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	4	87460	87460	G	T	SNP	ZNF595	ENST00000339368	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ZNF595	HGNC	ENSG00000197701	tier1	-	-	31	0	0.00	18	3	14.29
DEFB106B	0	genome.wustl.edu	37	8	7340204	7340204	+	Silent	SNP	A	A	G			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	8	7340204	7340204	A	G	SNP	DEFB106B	ENST00000335479	human	ensembl	74_37	-1	known	silent	c.120	p.N40	0.791	NULL	NULL	-	no_errors	DEFB106B	HGNC	ENSG00000187082	tier1	rs138253070	-	27	0	0.00	38	8	17.39
MMS22L	0	genome.wustl.edu	37	6	97626435	97626435	+	Missense_Mutation	SNP	T	T	G			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	6	97626435	97626435	T	G	SNP	MMS22L	ENST00000275053	human	ensembl	74_37	-1	known	missense	c.2563	p.K855Q	0.895	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MMS22L	HGNC	ENSG00000146263	tier1	-	-	51	0	0.00	30	27	47.37
COL13A1	0	genome.wustl.edu	37	10	71654434	71654434	+	Missense_Mutation	SNP	C	C	T			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	10	71654434	71654434	C	T	SNP	COL13A1	ENST00000356340	human	ensembl	74_37	+1	known	missense	c.607	p.P203S	1.000	pfam_Collagen	pfam_Collagen	-	no_errors	COL13A1	HGNC	ENSG00000197467	tier1	-	-	71	0	0.00	78	9	10.23
ELFN2	0	genome.wustl.edu	37	22	37771877	37771888	+	RNA	DEL	CCTCCTCCTCCT	CCTCCTCCTCCT	-			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	CCTCCTCCTCCT	CCTCCTCCTCCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	22	37771877	37771888	CCTCCTCCTCCT	-	DEL	ELFN2	ENST00000414347	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.043:0.085:0.127:0.169:0.212:0.255:0.522:0.565:0.606:0.646:0.668:0.717	-	-	-	no_errors	ELFN2	HGNC	ENSG00000166897	tier1			NA	NA	NA	NA	NA	NA
PPP2R1A	0	genome.wustl.edu	37	19	52715971	52715971	+	Missense_Mutation	SNP	C	C	G			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	19	52715971	52715971	C	G	SNP	PPP2R1A	ENST00000322088	human	ensembl	74_37	+1	known	missense	c.536	p.P179R	1.000	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP2R1A	HGNC	ENSG00000105568	tier1	-	-	45	0	0.00	37	36	49.32
SRPX	0	genome.wustl.edu	37	X	38020241	38020242	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	X	38020241	38020242	TG	-	DEL	SRPX	ENST00000378533	human	ensembl	74_37	-1	known	frame_shift_del	c.720_719	p.T240fs	0.413:0.998	pfam_Hyalin,pfscan_Hyalin	pfam_Hyalin,pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Hyalin,pfscan_Sushi_SCR_CCP	-	no_errors	SRPX	HGNC	ENSG00000101955	tier1			48	0	0.00	11	27	71.05
IQCD	0	genome.wustl.edu	37	12	113645821	113645821	+	Missense_Mutation	SNP	T	T	C			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	12	113645821	113645821	T	C	SNP	IQCD	ENST00000416617	human	ensembl	74_37	-1	known	missense	c.151	p.R51G	1.000	NULL	pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCD	HGNC	ENSG00000166578	tier1	-	-	136	0	0.00	225	57	20.21
KRAS	0	genome.wustl.edu	37	12	25380275	25380275	+	Missense_Mutation	SNP	T	T	A			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	12	25380275	25380275	T	A	SNP	KRAS	ENST00000256078	human	ensembl	74_37	-1	known	missense	c.183	p.Q61H	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	KRAS	HGNC	ENSG00000133703	tier1	rs17851045	-	31	0	0.00	21	34	61.82
PKHD1L1	0	genome.wustl.edu	37	8	110477413	110477413	+	Missense_Mutation	SNP	C	C	G			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	8	110477413	110477413	C	G	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	missense	c.8352	p.N2784K	1.000	NULL	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038	tier1	-	-	61	0	0.00	52	40	43.48
CNTNAP4	0	genome.wustl.edu	37	16	76509936	76509936	+	Missense_Mutation	SNP	C	C	G			TCGA-IW-A3M5-01A-22D-A21Q-09	TCGA-IW-A3M5-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03ced0ce-186a-4349-8d98-572c2bc90382	e5aba172-82cb-406e-9841-d2568d14b2fc	16	76509936	76509936	C	G	SNP	CNTNAP4	ENST00000307431	human	ensembl	74_37	+1	known	missense	c.1753	p.H585D	1.000	superfamily_Fibrinogen_a/b/g_C_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP4	HGNC	ENSG00000152910	tier1	-	-	37	0	0.00	37	10	21.28
