Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
SNORD3B-2	0	genome.wustl.edu	37	17	18967256	18967256	+	RNA	SNP	C	C	G			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	17	18967256	18967256	C	G	SNP	SNORD3B-2	ENST00000364880	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.036	-	-	-	no_errors	SNORD3B-2	HGNC	ENSG00000262074	tier1	-	-	17	0	0.00	19	24	55.81
MAGEA11	0	genome.wustl.edu	37	X	148798425	148798425	+	Missense_Mutation	SNP	G	G	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	X	148798425	148798425	G	A	SNP	MAGEA11	ENST00000355220	human	ensembl	74_37	+1	known	missense	c.1279	p.E427K	0.015	NULL	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA11	HGNC	ENSG00000185247	tier1	-	-	43	0	0.00	30	26	46.43
KIAA1919	0	genome.wustl.edu	37	6	111587229	111587229	+	Missense_Mutation	SNP	A	A	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	6	111587229	111587229	A	T	SNP	KIAA1919	ENST00000368847	human	ensembl	74_37	+1	known	missense	c.464	p.E155V	0.273	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	KIAA1919	HGNC	ENSG00000173214	tier1	-	-	24	0	0.00	1	7	87.50
PVRL3	0	genome.wustl.edu	37	3	110911220	110911220	+	Missense_Mutation	SNP	C	C	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	3	110911220	110911220	C	T	SNP	PVRL3	ENST00000493615	human	ensembl	74_37	+1	putative	missense	c.1244	p.T415I	1.000	NULL	pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	PVRL3	HGNC	ENSG00000177707	tier1	-	-	45	0	0.00	23	20	46.51
SPO11	0	genome.wustl.edu	37	20	55917803	55917803	+	Missense_Mutation	SNP	T	T	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	20	55917803	55917803	T	A	SNP	SPO11	ENST00000371263	human	ensembl	74_37	+1	known	missense	c.978	p.D326E	0.991	superfamily_Spo11/TopoVI_A,prints_Meiotic_Spo11	pfam_Meiosis_Spo11,pfam_Spo11/TopoVI_A_N,superfamily_Spo11/TopoVI_A,prints_Meiotic_Spo11,prints_Spo11/TopoVI_A,prints_TopoVI_A	-	no_errors	SPO11	HGNC	ENSG00000054796	tier1	-	-	13	0	0.00	14	16	53.33
PSME4	0	genome.wustl.edu	37	2	54176323	54176323	+	Missense_Mutation	SNP	T	T	C			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	2	54176323	54176323	T	C	SNP	PSME4	ENST00000404125	human	ensembl	74_37	-1	known	missense	c.340	p.S114G	1.000	NULL	pfam_DUF3437,superfamily_ARM-type_fold	-	no_errors	PSME4	HGNC	ENSG00000068878	tier1	-	-	26	0	0.00	16	22	57.89
CYP2A6	0	genome.wustl.edu	37	19	41354534	41354534	+	Missense_Mutation	SNP	G	G	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	19	41354534	41354534	G	T	SNP	CYP2A6	ENST00000301141	human	ensembl	74_37	-1	known	missense	c.478	p.L160I	0.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP2A6	HGNC	ENSG00000255974	tier1	rs60563539	-	66	0	0.00	52	7	11.86
PPP1R21	0	genome.wustl.edu	37	2	48722864	48722864	+	Missense_Mutation	SNP	G	G	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	2	48722864	48722864	G	A	SNP	PPP1R21	ENST00000294952	human	ensembl	74_37	+1	known	missense	c.1646	p.R549H	1.000	pfam_KLRAQ/TTKRSYEDQ_C	pfam_KLRAQ/TTKRSYEDQ_C,pfam_Unchr_KLRAQ/TTKRSYEDQ_N,superfamily_Ferritin-like_SF	-	no_errors	PPP1R21	HGNC	ENSG00000162869	tier1	rs144544742	-	33	0	0.00	11	16	59.26
OR52W1	0	genome.wustl.edu	37	11	6221371	6221371	+	Silent	SNP	A	A	G			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	11	6221371	6221371	A	G	SNP	OR52W1	ENST00000311352	human	ensembl	74_37	+1	known	silent	c.918	p.R306	0.072	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	-	no_errors	OR52W1	HGNC	ENSG00000175485	tier1	-	-	44	0	0.00	18	21	53.85
ATXN1L	0	genome.wustl.edu	37	16	71884767	71884768	+	Frame_Shift_Ins	INS	-	-	G			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	16	71884767	71884768	-	G	INS	ATXN1L	ENST00000427980	human	ensembl	74_37	+1	known	frame_shift_ins	c.1124_1125	p.R377fs	1.000:0.993	NULL	pfam_Ataxin-1_HBP1,superfamily_Ataxin-1_HBP1,smart_Ataxin_AXH_dom,pfscan_Ataxin-1_HBP1	-	no_errors	ATXN1L	HGNC	ENSG00000224470	tier1			25	0	0.00	4	13	76.47
TRIM3	0	genome.wustl.edu	37	11	6486813	6486813	+	Missense_Mutation	SNP	A	A	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	11	6486813	6486813	A	T	SNP	TRIM3	ENST00000345851	human	ensembl	74_37	-1	known	missense	c.113	p.L38Q	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM3	HGNC	ENSG00000110171	tier1	-	-	38	0	0.00	19	21	51.22
SLC15A5	0	genome.wustl.edu	37	12	16392642	16392650	+	In_Frame_Del	DEL	CTCTCTTAG	CTCTCTTAG	-			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	CTCTCTTAG	CTCTCTTAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	12	16392642	16392650	CTCTCTTAG	-	DEL	SLC15A5	ENST00000344941	human	ensembl	74_37	-1	novel	in_frame_del	c.1135_1127	p.SKRV376in_frame_delF	0.139:0.131:0.134:0.147:0.147:0.137:0.102:0.054:0.068	pfam_POT_fam,superfamily_MFS_dom_general_subst_transpt	pfam_POT_fam,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC15A5	HGNC	ENSG00000188991	tier1			NA	NA	NA	NA	NA	NA
ENSG00000229481	0	genome.wustl.edu	37	19	38321382	38321409	+	RNA	DEL	ATAGGCCAAGCATCTTACTGTATCCTTA	ATAGGCCAAGCATCTTACTGTATCCTTA	-			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	ATAGGCCAAGCATCTTACTGTATCCTTA	ATAGGCCAAGCATCTTACTGTATCCTTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	19	38321382	38321409	ATAGGCCAAGCATCTTACTGTATCCTTA	-	DEL	ENSG00000229481	ENST00000443870	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.908:0.956:0.955:0.942:0.994:1.000:1.000:1.000:1.000:1.000:0.996:0.874:0.272:0.255:0.272:0.267:0.257:0.049:0.002:0.000:0.144:0.255:0.332:0.326:0.001:0.000:0.000:0.000	-	-	-	no_errors	CTD-2554C21.3	Clone_based_vega_gene	ENSG00000229481	tier1			NA	NA	NA	NA	NA	NA
IK	0	genome.wustl.edu	37	5	140038905	140038905	+	Missense_Mutation	SNP	G	G	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	5	140038905	140038905	G	T	SNP	IK	ENST00000417647	human	ensembl	74_37	+1	known	missense	c.1182	p.M394I	0.990	NULL	pfam_RED_N,pfam_RED_C	-	no_errors	IK	HGNC	ENSG00000113141	tier1	-	-	34	0	0.00	23	23	50.00
DNM1P46	0	genome.wustl.edu	37	15	100340305	100340305	+	RNA	SNP	T	T	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	15	100340305	100340305	T	A	SNP	DNM1P46	ENST00000341853	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.986	-	-	-	no_errors	DNM1P46	HGNC	ENSG00000182397	tier1	-	-	46	0	0.00	37	4	9.76
ANP32BP1	0	genome.wustl.edu	37	15	75614887	75614887	+	RNA	SNP	G	G	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	15	75614887	75614887	G	A	SNP	ANP32BP1	ENST00000564205	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	ANP32BP1	HGNC	ENSG00000259790	tier1	-	-	42	0	0.00	29	18	38.30
DNAH17	0	genome.wustl.edu	37	17	76503585	76503585	+	Silent	SNP	G	G	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	17	76503585	76503585	G	A	SNP	DNAH17	ENST00000389840	human	ensembl	74_37	-1	known	silent	c.4527	p.L1509	0.970	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_HR1_rho-bd	-	no_errors	DNAH17	HGNC	ENSG00000187775	tier1	-	-	40	0	0.00	15	16	51.61
TP53	0	genome.wustl.edu	37	17	7577568	7577568	+	Missense_Mutation	SNP	C	C	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	17	7577568	7577568	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.713	p.C238Y	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	53	0	0.00	0	16	100.00
LOC150776	0	genome.wustl.edu	37	2	132278713	132278713	+	RNA	SNP	T	T	C			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	2	132278713	132278713	T	C	SNP	LOC150776	ENST00000438378	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	AC093838.4	Clone_based_vega_gene	ENSG00000152117	tier1	rs200714420	-	11	0	0.00	9	5	35.71
ARHGAP8	0	genome.wustl.edu	37	22	45110527	45110527	+	Missense_Mutation	SNP	T	T	G			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	22	45110527	45110527	T	G	SNP	ARHGAP8	ENST00000517296	human	ensembl	74_37	+1	known	missense	c.191	p.L64R	1.000	pfam_HbrB	pfam_RhoGAP_dom,pfam_HbrB,pfam_CRAL-TRIO_dom,superfamily_Rho_GTPase_activation_prot,superfamily_CRAL-TRIO_dom,smart_RhoGAP_dom,pfscan_CRAL-TRIO_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP8	HGNC	ENSG00000241484	tier1	-	-	21	0	0.00	0	11	100.00
ADCY1	0	genome.wustl.edu	37	7	45688271	45688271	+	Missense_Mutation	SNP	G	G	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	7	45688271	45688271	G	T	SNP	ADCY1	ENST00000297323	human	ensembl	74_37	+1	known	missense	c.1023	p.E341D	0.995	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY1	HGNC	ENSG00000164742	tier1	-	-	34	0	0.00	22	10	31.25
NPAP1	0	genome.wustl.edu	37	15	24924311	24924311	+	Silent	SNP	C	C	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	15	24924311	24924311	C	T	SNP	NPAP1	ENST00000329468	human	ensembl	74_37	+1	known	silent	c.3297	p.C1099	0.000	NULL	NULL	-	no_errors	NPAP1	HGNC	ENSG00000185823	tier1	-	-	40	0	0.00	46	9	16.36
N4BP2L2	0	genome.wustl.edu	37	13	33016602	33016602	+	Missense_Mutation	SNP	C	C	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	13	33016602	33016602	C	A	SNP	N4BP2L2	ENST00000399396	human	ensembl	74_37	-1	known	missense	c.2072	p.R691L	0.000	NULL	superfamily_P-loop_NTPase	-	no_errors	N4BP2L2	HGNC	ENSG00000244754	tier1	-	-	42	0	0.00	44	4	8.16
PPM1E	0	genome.wustl.edu	37	17	56833457	56833457	+	Silent	SNP	G	G	C			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	17	56833457	56833457	G	C	SNP	PPM1E	ENST00000308249	human	ensembl	74_37	+1	known	silent	c.99	p.P33	0.984	NULL	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1E	HGNC	ENSG00000175175	tier1	rs74256772	-	19	0	0.00	30	6	16.67
DLGAP1	0	genome.wustl.edu	37	18	3729210	3729210	+	Missense_Mutation	SNP	C	C	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	18	3729210	3729210	C	T	SNP	DLGAP1	ENST00000315677	human	ensembl	74_37	-1	known	missense	c.1516	p.D506N	1.000	NULL	pfam_GKAP	-	no_errors	DLGAP1	HGNC	ENSG00000170579	tier1	-	-	43	0	0.00	38	41	51.90
ENSG00000221492	0	genome.wustl.edu	37	1	51656628	51656629	+	RNA	INS	-	-	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	1	51656628	51656629	-	A	INS	ENSG00000221492	ENST00000408565	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.273:0.275	-	-	-	no_errors	AL162430.1	Clone_based_ensembl_gene	ENSG00000221492	tier1			30	0	0.00	16	14	46.67
PTX4	0	genome.wustl.edu	37	16	1537837	1537837	+	Silent	SNP	C	C	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	16	1537837	1537837	C	A	SNP	PTX4	ENST00000447419	human	ensembl	74_37	-1	known	silent	c.276	p.R92	0.028	NULL	pfam_Pentaxin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	PTX4	HGNC	ENSG00000251692	tier1	-	-	50	0	0.00	80	36	31.03
ABCA13	0	genome.wustl.edu	37	7	48335445	48335445	+	Missense_Mutation	SNP	A	A	C			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	7	48335445	48335445	A	C	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	missense	c.9104	p.Q3035P	0.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869	tier1	-	-	41	0	0.00	26	22	45.83
FTCD	0	genome.wustl.edu	37	21	47558841	47558841	+	RNA	SNP	C	C	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	21	47558841	47558841	C	T	SNP	FTCD	ENST00000488577	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.549	-	-	-	no_errors	FTCD	HGNC	ENSG00000160282	tier1	-	-	46	0	0.00	54	6	10.00
EP400	0	genome.wustl.edu	37	12	132547087	132547087	+	Silent	SNP	G	G	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	12	132547087	132547087	G	A	SNP	EP400	ENST00000333577	human	ensembl	74_37	+1	known	silent	c.8283	p.Q2761	1.000	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495	tier1	rs12366766	-	26	0	0.00	28	6	17.65
NELFB	0	genome.wustl.edu	37	9	140150511	140150511	+	Frame_Shift_Del	DEL	G	G	-			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	9	140150511	140150511	G	-	DEL	NELFB	ENST00000343053	human	ensembl	74_37	+1	known	frame_shift_del	c.255	p.A86fs	1.000	NULL	pfam_COBRA1	-	no_errors	NELFB	HGNC	ENSG00000188986	tier1			21	0	0.00	14	12	46.15
ENSG00000244227	0	genome.wustl.edu	37	3	167630632	167630632	+	RNA	SNP	A	A	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	3	167630632	167630632	A	T	SNP	ENSG00000244227	ENST00000459923	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.937	-	-	-	no_errors	RP11-298O21.5	Clone_based_vega_gene	ENSG00000244227	tier1	-	-	77	0	0.00	68	56	45.16
FAM83B	0	genome.wustl.edu	37	6	54805246	54805246	+	Missense_Mutation	SNP	C	C	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	6	54805246	54805246	C	T	SNP	FAM83B	ENST00000306858	human	ensembl	74_37	+1	known	missense	c.1477	p.R493C	1.000	NULL	pfam_DUF1669	-	no_errors	FAM83B	HGNC	ENSG00000168143	tier1	-	-	28	0	0.00	3	21	87.50
PRRT3	0	genome.wustl.edu	37	3	9990873	9990873	+	Missense_Mutation	SNP	C	C	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	3	9990873	9990873	C	A	SNP	PRRT3	ENST00000295984	human	ensembl	74_37	-1	known	missense	c.927	p.Q309H	0.010	NULL	NULL	-	no_errors	PRRT3	HGNC	ENSG00000163704	tier1	-	-	11	0	0.00	12	14	53.85
C1orf87	0	genome.wustl.edu	37	1	60499211	60499211	+	Missense_Mutation	SNP	G	G	C			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	1	60499211	60499211	G	C	SNP	C1orf87	ENST00000371201	human	ensembl	74_37	-1	known	missense	c.966	p.D322E	0.000	NULL	NULL	-	no_errors	C1orf87	HGNC	ENSG00000162598	tier1	-	-	70	0	0.00	60	10	14.29
C16orf3	0	genome.wustl.edu	37	16	90095596	90095596	+	Missense_Mutation	SNP	A	A	G			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	16	90095596	90095596	A	G	SNP	C16orf3	ENST00000408886	human	ensembl	74_37	-1	known	missense	c.155	p.I52T	0.000	NULL	NULL	-	no_errors	C16orf3	HGNC	ENSG00000221819	tier1	rs55742939	-	42	0	0.00	13	9	40.91
FTCD	0	genome.wustl.edu	37	21	47558805	47558805	+	Missense_Mutation	SNP	C	C	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	21	47558805	47558805	C	A	SNP	FTCD	ENST00000359679	human	ensembl	74_37	-1	known	missense	c.1293	p.E431D	1.000	pfam_Cyclodeamin/CycHdrlase,superfamily_Cyclodeamin/CycHdrlase	pfam_Formiminotransferase_N,pfam_Formiminotransferase_C,pfam_Cyclodeamin/CycHdrlase,superfamily_FormiminoTrfase_N/C_subdom,superfamily_Cyclodeamin/CycHdrlase,tigrfam_Formiminotransferase_cat	-	no_errors	FTCD	HGNC	ENSG00000160282	tier1	-	-	41	0	0.00	50	5	9.09
KLHL41	0	genome.wustl.edu	37	2	170371121	170371121	+	Missense_Mutation	SNP	C	C	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	2	170371121	170371121	C	A	SNP	KLHL41	ENST00000284669	human	ensembl	74_37	+1	known	missense	c.1148	p.P383H	1.000	smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL41	HGNC	ENSG00000239474	tier1	-	-	27	0	0.00	15	22	59.46
SPATA31D1	0	genome.wustl.edu	37	9	84606723	84606723	+	Nonsense_Mutation	SNP	C	C	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	9	84606723	84606723	C	A	SNP	SPATA31D1	ENST00000344803	human	ensembl	74_37	+1	known	nonsense	c.1338	p.Y446*	0.000	NULL	NULL	-	no_errors	SPATA31D1	HGNC	ENSG00000214929	tier1	-	-	47	0	0.00	55	33	37.50
FLJ45974	0	genome.wustl.edu	37	7	53879544	53879544	+	RNA	SNP	G	G	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	7	53879544	53879544	G	T	SNP	FLJ45974	ENST00000380970	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.103	-	-	-	no_errors	GS1-179L18.1	Clone_based_vega_gene	ENSG00000205628	tier1	-	-	11	0	0.00	9	9	50.00
KRT32	0	genome.wustl.edu	37	17	39619137	39619137	+	Silent	SNP	G	G	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	17	39619137	39619137	G	T	SNP	KRT32	ENST00000225899	human	ensembl	74_37	-1	known	silent	c.1162	p.R388	0.999	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT32	HGNC	ENSG00000108759	tier1	-	-	39	0	0.00	21	26	55.32
CTTN	0	genome.wustl.edu	37	11	70269070	70269070	+	Missense_Mutation	SNP	A	A	G			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	11	70269070	70269070	A	G	SNP	CTTN	ENST00000301843	human	ensembl	74_37	+1	known	missense	c.926	p.K309R	0.997	pfam_Hs1_Cortactin,pfscan_Hs1_Cortactin	pfam_Hs1_Cortactin,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_Hs1_Cortactin,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	CTTN	HGNC	ENSG00000085733	tier1	-	-	99	0	0.00	40	38	48.72
ALOX15B	0	genome.wustl.edu	37	17	7945777	7945777	+	Missense_Mutation	SNP	G	G	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	17	7945777	7945777	G	T	SNP	ALOX15B	ENST00000380183	human	ensembl	74_37	+1	known	missense	c.540	p.K180N	0.878	superfamily_LipOase_C	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_mml,prints_LipOase_C	-	no_errors	ALOX15B	HGNC	ENSG00000179593	tier1	-	-	17	0	0.00	1	9	90.00
NLRC3	0	genome.wustl.edu	37	16	3614642	3614642	+	Missense_Mutation	SNP	A	A	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	16	3614642	3614642	A	T	SNP	NLRC3	ENST00000448023	human	ensembl	74_37	-1	known	missense	c.437	p.L146Q	1.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase	-	no_errors	NLRC3	HGNC	ENSG00000167984	tier1	-	-	29	0	0.00	68	7	9.33
KCP	0	genome.wustl.edu	37	7	128547390	128547390	+	RNA	SNP	G	G	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	7	128547390	128547390	G	A	SNP	KCP	ENST00000297801	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.180	-	-	-	no_errors	KCP	HGNC	ENSG00000135253	tier1	-	-	16	0	0.00	11	9	45.00
AP3D1	0	genome.wustl.edu	37	19	2117232	2117232	+	Silent	SNP	T	T	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	19	2117232	2117232	T	A	SNP	AP3D1	ENST00000355272	human	ensembl	74_37	-1	known	silent	c.1848	p.P616	0.403	superfamily_ARM-type_fold,pirsf_AP3_complex_dsu	pfam_BLV_receptor,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_dsu	-	no_errors	AP3D1	HGNC	ENSG00000065000	tier1	-	-	36	0	0.00	5	13	72.22
NDUFV2	0	genome.wustl.edu	37	18	9122591	9122591	+	Silent	SNP	T	T	C			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	18	9122591	9122591	T	C	SNP	NDUFV2	ENST00000318388	human	ensembl	74_37	+1	known	silent	c.381	p.V127	1.000	pfam_NuoE_like,superfamily_Thioredoxin-like_fold,tigrfam_NuoE_like	pfam_NuoE_like,superfamily_Thioredoxin-like_fold,tigrfam_NuoE_like	-	no_errors	NDUFV2	HGNC	ENSG00000178127	tier1	rs76552443	-	50	0	0.00	60	8	11.76
AKNAD1	0	genome.wustl.edu	37	1	109394814	109394816	+	In_Frame_Del	DEL	TTC	TTC	-			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	TTC	TTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	1	109394814	109394816	TTC	-	DEL	AKNAD1	ENST00000370001	human	ensembl	74_37	-1	known	in_frame_del	c.473_471	p.K157in_frame_del	0.000:0.009:0.013	NULL	pfam_TF_AT-hook	-	no_errors	AKNAD1	HGNC	ENSG00000162641	tier1			8	0	0.00	11	4	26.67
ASPG	0	genome.wustl.edu	37	14	104565266	104565266	+	Missense_Mutation	SNP	T	T	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	14	104565266	104565266	T	A	SNP	ASPG	ENST00000455920	human	ensembl	74_37	+1	known	missense	c.590	p.F197Y	1.000	pfam_Asparaginase/glutaminase,superfamily_Asparaginase/glutaminase,smart_Asparaginase/glutaminase,tigrfam_AsnASEI	pfam_Asparaginase/glutaminase,pfam_Ankyrin_rpt,superfamily_Asparaginase/glutaminase,superfamily_Ankyrin_rpt-contain_dom,smart_Asparaginase/glutaminase,smart_Ankyrin_rpt,prints_Asparaginase/glutaminase,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_AsnASEI	-	no_errors	ASPG	HGNC	ENSG00000166183	tier1	-	-	56	0	0.00	39	39	50.00
DCHS2	0	genome.wustl.edu	37	4	155253963	155253963	+	Missense_Mutation	SNP	A	A	G			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	4	155253963	155253963	A	G	SNP	DCHS2	ENST00000357232	human	ensembl	74_37	-1	known	missense	c.1900	p.F634L	0.998	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410	tier1	-	-	33	0	0.00	19	15	44.12
POM121	0	genome.wustl.edu	37	7	72412427	72412427	+	Missense_Mutation	SNP	G	G	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	7	72412427	72412427	G	A	SNP	POM121	ENST00000434423	human	ensembl	74_37	+1	known	missense	c.1895	p.S632N	0.985	NULL	NULL	-	no_errors	POM121	HGNC	ENSG00000196313	tier1	rs201876140	-	29	0	0.00	35	7	16.28
CDHR3	0	genome.wustl.edu	37	7	105671282	105671282	+	Missense_Mutation	SNP	T	T	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	7	105671282	105671282	T	A	SNP	CDHR3	ENST00000317716	human	ensembl	74_37	+1	known	missense	c.2349	p.D783E	1.000	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR3	HGNC	ENSG00000128536	tier1	-	-	60	0	0.00	47	32	40.51
NAP1L4	0	genome.wustl.edu	37	11	2991127	2991127	+	Missense_Mutation	SNP	G	G	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	11	2991127	2991127	G	T	SNP	NAP1L4	ENST00000380542	human	ensembl	74_37	-1	known	missense	c.440	p.A147E	0.855	pfam_NAP_family	pfam_NAP_family	-	no_errors	NAP1L4	HGNC	ENSG00000205531	tier1	-	-	52	0	0.00	65	6	8.45
FAM21C	0	genome.wustl.edu	37	10	46261226	46261226	+	Missense_Mutation	SNP	G	G	C			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	10	46261226	46261226	G	C	SNP	FAM21C	ENST00000374362	human	ensembl	74_37	+1	known	missense	c.1837	p.A613P	0.964	NULL	NULL	-	no_errors	FAM21C	HGNC	ENSG00000172661	tier1	-	-	101	0	0.00	87	46	34.59
PLCG1	0	genome.wustl.edu	37	20	39792474	39792474	+	Splice_Site	SNP	G	G	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	20	39792474	39792474	G	T	SNP	PLCG1	ENST00000244007	human	ensembl	74_37	+1	known	splice_site	c.1010+1	e10+1	1.000	-	-	-	no_errors	PLCG1	HGNC	ENSG00000124181	tier1	-	-	53	0	0.00	46	36	43.90
KIF6	0	genome.wustl.edu	37	6	39545869	39545869	+	Nonsense_Mutation	SNP	G	G	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	6	39545869	39545869	G	A	SNP	KIF6	ENST00000287152	human	ensembl	74_37	-1	known	nonsense	c.1144	p.Q382*	1.000	superfamily_P-loop_NTPase	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF6	HGNC	ENSG00000164627	tier1	-	-	37	0	0.00	6	18	75.00
EP400	0	genome.wustl.edu	37	12	132547093	132547093	+	Silent	SNP	A	A	G			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	12	132547093	132547093	A	G	SNP	EP400	ENST00000333577	human	ensembl	74_37	+1	known	silent	c.8289	p.Q2763	0.900	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495	tier1	rs28513925	-	25	0	0.00	27	8	22.86
PREX1	0	genome.wustl.edu	37	20	47317304	47317304	+	Missense_Mutation	SNP	T	T	G			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	20	47317304	47317304	T	G	SNP	PREX1	ENST00000371941	human	ensembl	74_37	-1	known	missense	c.904	p.K302Q	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_DEP_dom,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX1	HGNC	ENSG00000124126	tier1	-	-	39	0	0.00	21	22	51.16
DCAF6	0	genome.wustl.edu	37	1	167960442	167960442	+	Missense_Mutation	SNP	G	G	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	1	167960442	167960442	G	A	SNP	DCAF6	ENST00000367840	human	ensembl	74_37	+1	known	missense	c.553	p.D185N	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_IQ_motif_EF-hand-BS,pfscan_WD40_repeat_dom	-	no_errors	DCAF6	HGNC	ENSG00000143164	tier1	-	-	44	0	0.00	24	20	45.45
EXPH5	0	genome.wustl.edu	37	11	108381630	108381630	+	Missense_Mutation	SNP	G	G	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	11	108381630	108381630	G	A	SNP	EXPH5	ENST00000265843	human	ensembl	74_37	-1	known	missense	c.4604	p.S1535F	0.000	NULL	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	-	no_errors	EXPH5	HGNC	ENSG00000110723	tier1	-	-	35	0	0.00	20	26	56.52
SMCHD1	0	genome.wustl.edu	37	18	2656092	2656092	+	Silent	SNP	C	C	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	18	2656092	2656092	C	T	SNP	SMCHD1	ENST00000320876	human	ensembl	74_37	+1	known	silent	c.18	p.G6	0.917	NULL	pfam_SMC_hinge,superfamily_SMC_hinge,superfamily_HATPase_ATP-bd,smart_SMC_hinge	-	no_errors	SMCHD1	HGNC	ENSG00000101596	tier1	-	-	34	0	0.00	17	18	47.37
C16orf3	0	genome.wustl.edu	37	16	90095597	90095597	+	Missense_Mutation	SNP	T	T	C			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	16	90095597	90095597	T	C	SNP	C16orf3	ENST00000408886	human	ensembl	74_37	-1	known	missense	c.154	p.I52V	0.000	NULL	NULL	-	no_errors	C16orf3	HGNC	ENSG00000221819	tier1	rs61118444	-	42	0	0.00	13	9	40.91
ANO6	0	genome.wustl.edu	37	12	45822936	45822936	+	Missense_Mutation	SNP	G	G	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	12	45822936	45822936	G	T	SNP	ANO6	ENST00000320560	human	ensembl	74_37	+1	known	missense	c.2575	p.V859L	0.999	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO6	HGNC	ENSG00000177119	tier1	-	-	19	0	0.00	5	5	50.00
SEPT14	0	genome.wustl.edu	37	7	55910726	55910726	+	Missense_Mutation	SNP	G	G	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	7	55910726	55910726	G	T	SNP	SEPT14	ENST00000388975	human	ensembl	74_37	-1	known	missense	c.467	p.S156Y	0.994	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT14	HGNC	ENSG00000154997	tier1	-	-	37	0	0.00	10	10	50.00
FMN2	0	genome.wustl.edu	37	1	240255569	240255571	+	In_Frame_Del	DEL	GGC	GGC	-			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	GGC	GGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	1	240255569	240255571	GGC	-	DEL	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	in_frame_del	c.160_162	p.G57in_frame_del	0.957:0.122:0.017	NULL	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816	tier1			11	0	0.00	11	5	31.25
HUWE1	0	genome.wustl.edu	37	X	53620560	53620560	+	Missense_Mutation	SNP	T	T	C			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	X	53620560	53620560	T	C	SNP	HUWE1	ENST00000262854	human	ensembl	74_37	-1	known	missense	c.3505	p.T1169A	1.000	NULL	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/Ts_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758	tier1	-	-	27	0	0.00	16	11	40.74
HMGCS1	0	genome.wustl.edu	37	5	43293070	43293070	+	Missense_Mutation	SNP	C	C	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	5	43293070	43293070	C	A	SNP	HMGCS1	ENST00000325110	human	ensembl	74_37	-1	known	missense	c.1189	p.A397S	1.000	pfam_HMG_CoA_synt_C,superfamily_Thiolase-like,tigrfam_HMG_CoA_synthase_euk	pfam_HMG_CoA_synt_C,pfam_HMG_CoA_synth_N,superfamily_Thiolase-like,tigrfam_HMG_CoA_synthase_euk	-	no_errors	HMGCS1	HGNC	ENSG00000112972	tier1	-	-	16	0	0.00	5	12	70.59
WDR78	0	genome.wustl.edu	37	1	67301325	67301325	+	Missense_Mutation	SNP	G	G	A			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	1	67301325	67301325	G	A	SNP	WDR78	ENST00000371026	human	ensembl	74_37	-1	known	missense	c.1717	p.P573S	0.425	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR78	HGNC	ENSG00000152763	tier1	-	-	32	0	0.00	12	6	33.33
SRC	0	genome.wustl.edu	37	20	36032316	36032316	+	RNA	SNP	C	C	T			TCGA-K1-A3PN-02A-11D-A228-09	TCGA-K1-A3PN-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d7eadeb5-54d2-4f18-9821-21d272ee52b5	b24e4a7b-236b-4dbe-9b7a-6c8427f8e423	20	36032316	36032316	C	T	SNP	SRC	ENST00000477066	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	SRC	HGNC	ENSG00000197122	tier1	-	-	31	0	0.00	36	17	32.08
