Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
COL22A1	0	genome.wustl.edu	37	8	139701172	139701172	+	Missense_Mutation	SNP	C	C	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	8	139701172	139701172	C	A	SNP	COL22A1	ENST00000303045	human	ensembl	74_37	-1	known	missense	c.2850	p.E950D	0.994	NULL	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL22A1	HGNC	ENSG00000169436	tier1	-	-	48	0	0.00	28	9	24.32
EML6	0	genome.wustl.edu	37	2	55086840	55086840	+	Splice_Site	SNP	T	T	G			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	2	55086840	55086840	T	G	SNP	EML6	ENST00000356458	human	ensembl	74_37	+1	novel	splice_site	c.1825+2	e11+2	1.000	-	-	-	no_errors	EML6	HGNC	ENSG00000214595	tier1	-	-	47	0	0.00	23	14	37.84
SSR1	0	genome.wustl.edu	37	6	7289958	7289959	+	RNA	DEL	CA	CA	-			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	6	7289958	7289959	CA	-	DEL	SSR1	ENST00000475213	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	SSR1	HGNC	ENSG00000124783	tier1			16	0	0.00	9	3	25.00
MOXD1	0	genome.wustl.edu	37	6	132695907	132695907	+	Missense_Mutation	SNP	T	T	G			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	6	132695907	132695907	T	G	SNP	MOXD1	ENST00000367963	human	ensembl	74_37	-1	known	missense	c.274	p.T92P	1.000	pfam_DOMON_domain,smart_DOMON_domain,pfscan_DOMON_domain	pfam_Cu2_ascorb_mOase_N,pfam_DOMON_domain,superfamily_PHM/PNGase_F_dom,smart_DOMON_domain,pfscan_DOMON_domain,prints_Dopamine_b_mOase	-	no_errors	MOXD1	HGNC	ENSG00000079931	tier1	-	-	53	0	0.00	38	40	51.28
MEG3	0	genome.wustl.edu	37	14	101324692	101324692	+	RNA	SNP	A	A	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	14	101324692	101324692	A	T	SNP	MEG3	ENST00000398460	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MEG3	HGNC	ENSG00000214548	tier1	-	-	40	0	0.00	34	6	15.00
PALD1	0	genome.wustl.edu	37	10	72300955	72300955	+	Missense_Mutation	SNP	C	C	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	10	72300955	72300955	C	T	SNP	PALD1	ENST00000263563	human	ensembl	74_37	+1	known	missense	c.2006	p.T669I	1.000	NULL	smart_Tyr_Pase_cat	-	no_errors	PALD1	HGNC	ENSG00000107719	tier1	-	-	33	0	0.00	30	4	11.76
RBM26	0	genome.wustl.edu	37	13	79939922	79939927	+	RNA	DEL	AAGAGA	AAGAGA	-			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	AAGAGA	AAGAGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	13	79939922	79939927	AAGAGA	-	DEL	RBM26	ENST00000461008	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.644:0.601:0.032:0.097:0.109:0.807	-	-	-	no_errors	RBM26	HGNC	ENSG00000139746	tier1			NA	NA	NA	NA	NA	NA
GRID2	0	genome.wustl.edu	37	4	94145868	94145868	+	Missense_Mutation	SNP	T	T	C			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	4	94145868	94145868	T	C	SNP	GRID2	ENST00000282020	human	ensembl	74_37	+1	known	missense	c.1067	p.I356T	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID2	HGNC	ENSG00000152208	tier1	-	-	41	0	0.00	19	22	53.66
APOB	0	genome.wustl.edu	37	2	21241919	21241919	+	Silent	SNP	G	G	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	2	21241919	21241919	G	T	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	silent	c.3066	p.L1022	0.958	pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674	tier1	-	-	61	0	0.00	23	15	39.47
CCNB1	0	genome.wustl.edu	37	5	68463826	68463826	+	Missense_Mutation	SNP	G	G	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	5	68463826	68463826	G	A	SNP	CCNB1	ENST00000256442	human	ensembl	74_37	+1	known	missense	c.113	p.G38E	0.002	pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNB1	HGNC	ENSG00000134057	tier1	-	-	29	0	0.00	17	4	19.05
CCDC102B	0	genome.wustl.edu	37	18	66505984	66505984	+	Silent	SNP	G	G	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	18	66505984	66505984	G	A	SNP	CCDC102B	ENST00000319445	human	ensembl	74_37	+1	known	silent	c.648	p.E216	0.002	NULL	NULL	-	no_errors	CCDC102B	HGNC	ENSG00000150636	tier1	-	-	30	0	0.00	25	5	16.67
EFCAB6	0	genome.wustl.edu	37	22	44168859	44168859	+	Missense_Mutation	SNP	C	C	G			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	22	44168859	44168859	C	G	SNP	EFCAB6	ENST00000262726	human	ensembl	74_37	-1	known	missense	c.264	p.L88F	0.298	smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_Ca-bd_contain_6,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	EFCAB6	HGNC	ENSG00000186976	tier1	-	-	61	0	0.00	43	5	10.42
MIR133A1	0	genome.wustl.edu	37	18	19408831	19408832	+	RNA	INS	-	-	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	18	19408831	19408832	-	T	INS	MIR133A1	ENST00000581072	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MIR133A1	HGNC	ENSG00000265142	tier1			20	0	0.00	24	3	11.11
WHAMMP3	0	genome.wustl.edu	37	15	23201566	23201566	+	RNA	SNP	C	C	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	15	23201566	23201566	C	A	SNP	WHAMMP3	ENST00000400153	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.678	-	-	-	no_errors	WHAMMP3	HGNC	ENSG00000187667	tier1	rs201716755	-	40	0	0.00	49	7	12.50
MSH3	0	genome.wustl.edu	37	5	79950712	79950738	+	In_Frame_Del	DEL	GCGGCCGCAGCGGCCGCAGCGCCCCCA	GCGGCCGCAGCGGCCGCAGCGCCCCCA	-			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	GCGGCCGCAGCGGCCGCAGCGCCCCCA	GCGGCCGCAGCGGCCGCAGCGCCCCCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	5	79950712	79950738	GCGGCCGCAGCGGCCGCAGCGCCCCCA	-	DEL	MSH3	ENST00000265081	human	ensembl	74_37	+1	known	in_frame_del	c.166_192	p.AAAAAAPPA57in_frame_del	0.238:0.205:0.172:0.140:0.107:0.075:0.032:0.035:0.048:0.057:0.087:0.730:0.747:0.894:0.911:0.915:0.941:0.965:0.997:1.000:1.000:1.000:1.000:0.988:0.984:0.963:0.965	NULL	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH3	HGNC	ENSG00000113318	tier1			NA	NA	NA	NA	NA	NA
CMKLR1	0	genome.wustl.edu	37	12	108685863	108685863	+	Missense_Mutation	SNP	C	C	G			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	12	108685863	108685863	C	G	SNP	CMKLR1	ENST00000312143	human	ensembl	74_37	-1	known	missense	c.877	p.V293L	0.310	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_DEZorph_rcpt,prints_ATII_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_DEZorph_rcpt,prints_GPCR_Rhodpsn,prints_Formyl_pep_rcpt,prints_Anphylx_rcpt,prints_ATII_rcpt	-	no_errors	CMKLR1	HGNC	ENSG00000174600	tier1	-	-	37	0	0.00	36	9	20.00
ADAMTSL4	0	genome.wustl.edu	37	1	150522471	150522472	+	RNA	INS	-	-	TG			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	1	150522471	150522472	-	TG	INS	ADAMTSL4	ENST00000483335	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ADAMTSL4	HGNC	ENSG00000143382	tier1			12	0	0.00	13	4	23.53
OXSM	0	genome.wustl.edu	37	3	25824576	25824576	+	RNA	SNP	C	C	G			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	3	25824576	25824576	C	G	SNP	OXSM	ENST00000460195	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	OXSM	HGNC	ENSG00000151093	tier1	-	-	16	0	0.00	16	5	23.81
STAB2	0	genome.wustl.edu	37	12	104102256	104102256	+	Silent	SNP	C	C	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	12	104102256	104102256	C	T	SNP	STAB2	ENST00000388887	human	ensembl	74_37	+1	known	silent	c.4230	p.P1410	0.005	smart_EG-like_dom,pfscan_EG-like_dom	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_FAS1_domain,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB2	HGNC	ENSG00000136011	tier1	-	-	89	0	0.00	32	36	52.94
C14orf159	0	genome.wustl.edu	37	14	91691075	91691075	+	Silent	SNP	C	C	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	14	91691075	91691075	C	T	SNP	C14orf159	ENST00000256324	human	ensembl	74_37	+1	known	silent	c.1764	p.G588	0.008	pirsf_UPF0317_mt	pfam_DUF1445,pirsf_UPF0317_mt	-	no_errors	C14orf159	HGNC	ENSG00000133943	tier1	rs138685998	GMAF=0.0005	44	0	0.00	32	24	42.86
NUP210L	0	genome.wustl.edu	37	1	154125319	154125319	+	Missense_Mutation	SNP	A	A	G			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	1	154125319	154125319	A	G	SNP	NUP210L	ENST00000368559	human	ensembl	74_37	-1	known	missense	c.233	p.V78A	1.000	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,smart_Big_2	-	no_errors	NUP210L	HGNC	ENSG00000143552	tier1	-	-	69	0	0.00	40	23	36.51
RB1	0	genome.wustl.edu	37	13	48919224	48919231	+	Frame_Shift_Del	DEL	AATTCTTT	AATTCTTT	-			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	AATTCTTT	AATTCTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	13	48919224	48919231	AATTCTTT	-	DEL	RB1	ENST00000267163	human	ensembl	74_37	+1	known	frame_shift_del	c.389_396	p.F131fs	1.000:1.000:1.000:1.000:0.998:1.000:0.997:0.994	pfam_RB_N,superfamily_Cyclin-like	pfam_RB_C,pfam_RB_A,pfam_RB_B,pfam_RB_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	RB1	HGNC	ENSG00000139687	tier1			NA	NA	NA	NA	NA	NA
PCDHGB6	0	genome.wustl.edu	37	5	140787977	140787977	+	Missense_Mutation	SNP	G	G	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	5	140787977	140787977	G	T	SNP	PCDHGB6	ENST00000520790	human	ensembl	74_37	+1	known	missense	c.208	p.A70S	0.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB6	HGNC	ENSG00000253305	tier1	-	-	72	0	0.00	52	10	16.13
BACE1	0	genome.wustl.edu	37	11	117163806	117163806	+	Silent	SNP	C	C	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	11	117163806	117163806	C	T	SNP	BACE1	ENST00000313005	human	ensembl	74_37	-1	known	silent	c.804	p.E268	1.000	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom,prints_Pept_A1_BACE	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom,prints_Pept_A1_BACE,prints_Pept_A1_BACE1,prints_Aspartic_peptidase	-	no_errors	BACE1	HGNC	ENSG00000186318	tier1	-	-	47	0	0.00	59	9	13.24
FOLH1	0	genome.wustl.edu	37	11	49204779	49204779	+	Missense_Mutation	SNP	C	C	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	11	49204779	49204779	C	T	SNP	FOLH1	ENST00000256999	human	ensembl	74_37	-1	known	missense	c.842	p.R281H	0.843	NULL	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	tier1	rs116795343	-	74	0	0.00	57	6	9.52
SPTA1	0	genome.wustl.edu	37	1	158605758	158605758	+	Missense_Mutation	SNP	G	G	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	1	158605758	158605758	G	A	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	missense	c.5377	p.R1793W	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554	tier1	-	-	50	0	0.00	34	21	38.18
FLG	0	genome.wustl.edu	37	1	152279033	152279033	+	Missense_Mutation	SNP	A	A	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	1	152279033	152279033	A	T	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.8329	p.S2777T	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	182	0	0.00	201	30	12.99
ZDHHC1	0	genome.wustl.edu	37	16	67440236	67440236	+	Missense_Mutation	SNP	C	C	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	16	67440236	67440236	C	A	SNP	ZDHHC1	ENST00000348579	human	ensembl	74_37	-1	known	missense	c.119	p.R40L	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC1	HGNC	ENSG00000159714	tier1	-	-	40	0	0.00	5	26	83.87
ALDH1B1	0	genome.wustl.edu	37	9	38396184	38396184	+	Missense_Mutation	SNP	C	C	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	9	38396184	38396184	C	T	SNP	ALDH1B1	ENST00000377698	human	ensembl	74_37	+1	known	missense	c.439	p.R147W	0.997	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1B1	HGNC	ENSG00000137124	tier1	-	-	17	0	0.00	16	7	30.43
IMPG1	0	genome.wustl.edu	37	6	76712708	76712708	+	Silent	SNP	A	A	G			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	6	76712708	76712708	A	G	SNP	IMPG1	ENST00000369950	human	ensembl	74_37	-1	known	silent	c.1218	p.A406	0.156	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	IMPG1	HGNC	ENSG00000112706	tier1	-	-	44	0	0.00	24	4	14.29
SLITRK3	0	genome.wustl.edu	37	3	164907874	164907874	+	Missense_Mutation	SNP	G	G	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	3	164907874	164907874	G	A	SNP	SLITRK3	ENST00000241274	human	ensembl	74_37	-1	known	missense	c.745	p.R249C	1.000	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK3	HGNC	ENSG00000121871	tier1	-	-	25	0	0.00	24	13	35.14
AGPAT4	0	genome.wustl.edu	37	6	161567594	161567594	+	Missense_Mutation	SNP	C	C	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	6	161567594	161567594	C	T	SNP	AGPAT4	ENST00000320285	human	ensembl	74_37	-1	known	missense	c.805	p.E269K	0.083	NULL	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	AGPAT4	HGNC	ENSG00000026652	tier1	-	-	30	0	0.00	12	8	40.00
NGLY1	0	genome.wustl.edu	37	3	25777541	25777541	+	Missense_Mutation	SNP	C	C	G			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	3	25777541	25777541	C	G	SNP	NGLY1	ENST00000280700	human	ensembl	74_37	-1	known	missense	c.1103	p.G368A	1.000	pfam_Rad4/PNGase_transGLS-fold	pfam_PUB_domain,pfam_Transglutaminase-like,pfam_Rad4/PNGase_transGLS-fold,pfam_Peptide_N_glycanase_PAW_dom,superfamily_Galactose-bd-like,smart_PUG-dom,smart_Transglutaminase-like,smart_Peptide_N_glycanase_PAW_dom	-	no_errors	NGLY1	HGNC	ENSG00000151092	tier1	-	-	33	0	0.00	27	19	41.30
SORCS1	0	genome.wustl.edu	37	10	108338894	108338894	+	Missense_Mutation	SNP	T	T	C			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	10	108338894	108338894	T	C	SNP	SORCS1	ENST00000344440	human	ensembl	74_37	-1	known	missense	c.3487	p.R1163G	1.000	NULL	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS1	HGNC	ENSG00000108018	tier1	-	-	60	0	0.00	29	5	14.71
ENSG00000206195	0	genome.wustl.edu	37	22	16151010	16151010	+	RNA	SNP	T	T	C			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	22	16151010	16151010	T	C	SNP	ENSG00000206195	ENST00000413768	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.448	-	-	-	no_errors	AP000525.9	Clone_based_vega_gene	ENSG00000206195	tier1	-	-	15	0	0.00	10	4	28.57
FAM134B	0	genome.wustl.edu	37	5	16572203	16572203	+	Missense_Mutation	SNP	G	G	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	5	16572203	16572203	G	A	SNP	FAM134B	ENST00000306320	human	ensembl	74_37	-1	known	missense	c.329	p.A110V	0.974	pfam_Reticulon	pfam_Reticulon	-	no_errors	FAM134B	HGNC	ENSG00000154153	tier1	-	-	27	0	0.00	35	4	10.26
FAM98A	0	genome.wustl.edu	37	2	33813495	33813495	+	Missense_Mutation	SNP	A	A	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	2	33813495	33813495	A	T	SNP	FAM98A	ENST00000238823	human	ensembl	74_37	-1	known	missense	c.429	p.F143L	1.000	pfam_Uncharacterised_FAM98	pfam_Uncharacterised_FAM98	-	no_errors	FAM98A	HGNC	ENSG00000119812	tier1	-	-	91	0	0.00	55	5	8.33
SNED1	0	genome.wustl.edu	37	2	242002249	242002249	+	Missense_Mutation	SNP	T	T	G			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	2	242002249	242002249	T	G	SNP	SNED1	ENST00000310397	human	ensembl	74_37	+1	known	missense	c.2299	p.S767A	1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Fibronectin_type3,pfam_Nidogen_extracell_dom,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_Fibronectin_type3,superfamily_Sushi_SCR_CCP,smart_Nidogen_extracell_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Fibronectin_type3,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Sushi_SCR_CCP	-	no_errors	SNED1	HGNC	ENSG00000162804	tier1	-	-	41	0	0.00	16	24	60.00
ENSG00000215933	0	genome.wustl.edu	37	X	71372202	71372209	+	RNA	DEL	CGCGCGCA	CGCGCGCA	-			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	CGCGCGCA	CGCGCGCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	X	71372202	71372209	CGCGCGCA	-	DEL	ENSG00000215933	ENST00000401114	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000:0.000:0.000:0.000:0.000:0.001:0.015:0.009	-	-	-	no_errors	BX119917.1	Clone_based_ensembl_gene	ENSG00000215933	tier1			NA	NA	NA	NA	NA	NA
CDH23	0	genome.wustl.edu	37	10	73491747	73491747	+	Missense_Mutation	SNP	A	A	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	10	73491747	73491747	A	T	SNP	CDH23	ENST00000224721	human	ensembl	74_37	+1	putative	missense	c.3734	p.D1245V	0.997	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736	tier1	-	-	68	0	0.00	11	13	54.17
C4orf45	0	genome.wustl.edu	37	4	159836382	159836383	+	Frame_Shift_Ins	INS	-	-	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	4	159836382	159836383	-	T	INS	C4orf45	ENST00000434826	human	ensembl	74_37	-1	known	frame_shift_ins	c.486_485	p.S163fs	0.000:0.001	NULL	NULL	-	no_errors	C4orf45	HGNC	ENSG00000164123	tier1			28	0	0.00	14	3	17.65
ABCC4	0	genome.wustl.edu	37	13	95724016	95724016	+	Missense_Mutation	SNP	T	T	C			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	13	95724016	95724016	T	C	SNP	ABCC4	ENST00000376887	human	ensembl	74_37	-1	known	missense	c.3110	p.H1037R	0.165	superfamily_P-loop_NTPase	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM	-	no_errors	ABCC4	HGNC	ENSG00000125257	tier1	-	-	83	0	0.00	78	48	38.10
NEMF	0	genome.wustl.edu	37	14	50307453	50307453	+	Silent	SNP	A	A	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	14	50307453	50307453	A	T	SNP	NEMF	ENST00000298310	human	ensembl	74_37	-1	known	silent	c.489	p.P163	0.993	pfam_Fibro-bd_N	pfam_Fibro-bd_N,pfam_DUF3441,pfam_DUF814,superfamily_FlgN-like_dom	-	no_errors	NEMF	HGNC	ENSG00000165525	tier1	-	-	27	0	0.00	22	7	24.14
FOLH1	0	genome.wustl.edu	37	11	49204790	49204790	+	Silent	SNP	A	A	G			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	11	49204790	49204790	A	G	SNP	FOLH1	ENST00000256999	human	ensembl	74_37	-1	known	silent	c.831	p.Y277	1.000	NULL	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	tier1	rs76509850	-	69	0	0.00	51	6	10.53
RBBP5	0	genome.wustl.edu	37	1	205066500	205066500	+	Missense_Mutation	SNP	C	C	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	1	205066500	205066500	C	T	SNP	RBBP5	ENST00000264515	human	ensembl	74_37	-1	known	missense	c.1120	p.E374K	1.000	NULL	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	RBBP5	HGNC	ENSG00000117222	tier1	-	-	29	0	0.00	34	5	12.82
ASH1L-AS1	0	genome.wustl.edu	37	1	155532940	155532940	+	RNA	SNP	A	A	G			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	1	155532940	155532940	A	G	SNP	ASH1L-AS1	ENST00000456633	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ASH1L-AS1	HGNC	ENSG00000235919	tier1	-	-	35	0	0.00	18	10	35.71
FAM182B	0	genome.wustl.edu	37	20	25755850	25755850	+	Missense_Mutation	SNP	A	A	C			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	20	25755850	25755850	A	C	SNP	FAM182B	ENST00000376404	human	ensembl	74_37	-1	known	missense	c.97	p.S33A	0.275	NULL	NULL	-	no_errors	FAM182B	HGNC	ENSG00000175170	tier1	rs79058598	-	57	0	0.00	46	13	22.03
ATP2B2	0	genome.wustl.edu	37	3	10400392	10400392	+	Missense_Mutation	SNP	C	C	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	3	10400392	10400392	C	T	SNP	ATP2B2	ENST00000352432	human	ensembl	74_37	-1	known	missense	c.2119	p.D707N	1.000	pfam_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B2	HGNC	ENSG00000157087	tier1	-	-	32	0	0.00	30	13	30.23
DCDC1	0	genome.wustl.edu	37	11	30953320	30953320	+	Silent	SNP	C	C	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	11	30953320	30953320	C	T	SNP	DCDC1	ENST00000339794	human	ensembl	74_37	-1	known	silent	c.132	p.T44	0.021	pfscan_Doublecortin_dom	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,pfscan_Doublecortin_dom,pfscan_Ricin_B_lectin	-	no_errors	DCDC1	HGNC	ENSG00000170959	tier1	-	-	70	0	0.00	32	23	41.82
BCL9L	0	genome.wustl.edu	37	11	118768467	118768467	+	RNA	DEL	T	T	-			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	11	118768467	118768467	T	-	DEL	BCL9L	ENST00000526143	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.885	-	-	-	no_errors	BCL9L	HGNC	ENSG00000186174	tier1			23	0	0.00	25	3	10.71
NPEPPS	0	genome.wustl.edu	37	17	45608843	45608843	+	Silent	SNP	C	C	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	17	45608843	45608843	C	A	SNP	NPEPPS	ENST00000322157	human	ensembl	74_37	+1	known	silent	c.177	p.S59	1.000	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	NPEPPS	HGNC	ENSG00000141279	tier1	-	-	100	0	0.00	36	38	51.35
ZNF527	0	genome.wustl.edu	37	19	37879696	37879696	+	Missense_Mutation	SNP	C	C	T			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	19	37879696	37879696	C	T	SNP	ZNF527	ENST00000436120	human	ensembl	74_37	+1	known	missense	c.745	p.H249Y	0.005	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF527	HGNC	ENSG00000189164	tier1	-	-	23	0	0.00	7	10	58.82
MUC21	0	genome.wustl.edu	37	6	30955173	30955173	+	Missense_Mutation	SNP	C	C	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	6	30955173	30955173	C	A	SNP	MUC21	ENST00000376296	human	ensembl	74_37	+1	known	missense	c.1221	p.N407K	0.000	NULL	NULL	-	no_errors	MUC21	HGNC	ENSG00000204544	tier1	-	-	118	1	0.84	65	41	38.68
OR5B12	0	genome.wustl.edu	37	11	58207393	58207393	+	Missense_Mutation	SNP	T	T	C			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	11	58207393	58207393	T	C	SNP	OR5B12	ENST00000302572	human	ensembl	74_37	-1	known	missense	c.232	p.K78E	0.998	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR5B12	HGNC	ENSG00000172362	tier1	-	-	35	0	0.00	19	22	53.66
LOC101927806	0	genome.wustl.edu	37	1	17198929	17198929	+	RNA	SNP	G	G	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	1	17198929	17198929	G	A	SNP	LOC101927806	ENST00000438002	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.025	-	-	-	no_errors	U1	RFAM	ENSG00000228549	tier1	rs7517060	-	12	0	0.00	13	5	27.78
DLGAP4	0	genome.wustl.edu	37	20	35156046	35156047	+	RNA	DEL	CA	CA	-			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	20	35156046	35156047	CA	-	DEL	DLGAP4	ENST00000475894	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	DLGAP4	HGNC	ENSG00000080845	tier1			32	0	0.00	26	4	13.33
OR13G1	0	genome.wustl.edu	37	1	247835522	247835522	+	Silent	SNP	G	G	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	1	247835522	247835522	G	A	SNP	OR13G1	ENST00000359688	human	ensembl	74_37	-1	known	silent	c.822	p.L274	0.002	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR13G1	HGNC	ENSG00000197437	tier1	-	-	69	0	0.00	39	8	17.02
C12orf55	0	genome.wustl.edu	37	12	96921130	96921130	+	Missense_Mutation	SNP	G	G	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	12	96921130	96921130	G	A	SNP	C12orf55	ENST00000524981	human	ensembl	74_37	+1	putative	missense	c.1265	p.R422Q	0.915	NULL	superfamily_Fibronectin_type3	-	no_errors	C12orf55	HGNC	ENSG00000188596	tier1	-	-	58	0	0.00	30	5	14.29
TNRC6C-AS1	0	genome.wustl.edu	37	17	76105711	76105711	+	RNA	SNP	A	A	G			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	17	76105711	76105711	A	G	SNP	TNRC6C-AS1	ENST00000374976	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	TNRC6C-AS1	HGNC	ENSG00000204282	tier1	-	-	9	0	0.00	5	11	68.75
ARHGAP10	0	genome.wustl.edu	37	4	148800447	148800447	+	Missense_Mutation	SNP	G	G	C			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	4	148800447	148800447	G	C	SNP	ARHGAP10	ENST00000336498	human	ensembl	74_37	+1	known	missense	c.897	p.K299N	0.990	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_RhoGAP_dom,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP10	HGNC	ENSG00000071205	tier1	-	-	34	0	0.00	6	4	40.00
ANKRD26P1	0	genome.wustl.edu	37	16	46552145	46552145	+	RNA	SNP	G	G	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	16	46552145	46552145	G	A	SNP	ANKRD26P1	ENST00000566201	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ANKRD26P1	HGNC	ENSG00000261239	tier1	-	-	28	0	0.00	11	4	26.67
FAM65C	0	genome.wustl.edu	37	20	49211167	49211167	+	Missense_Mutation	SNP	G	G	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	20	49211167	49211167	G	A	SNP	FAM65C	ENST00000535356	human	ensembl	74_37	-1	known	missense	c.2135	p.A712V	0.007	NULL	superfamily_ARM-type_fold,superfamily_Chemokine_IL8-like_dom	-	no_errors	FAM65C	HGNC	ENSG00000042062	tier1	-	-	31	0	0.00	34	9	20.93
KRT16P1	0	genome.wustl.edu	37	17	18345167	18345167	+	RNA	SNP	G	G	A			TCGA-PC-A5DP-01A-11D-A26G-09	TCGA-PC-A5DP-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3981bdbb-1c60-4c47-a19d-71ec784d40ac	393af8a4-0e5b-442a-819b-ea6af3b395dd	17	18345167	18345167	G	A	SNP	KRT16P1	ENST00000581027	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KRT16P1	HGNC	ENSG00000214856	tier1	-	-	22	0	0.00	27	14	34.15
