Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
DHX38	0	genome.wustl.edu	37	16	72135400	72135400	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	16	72135400	72135400	C	A	SNP	DHX38	ENST00000268482	human	ensembl	74_37	+1	known	missense	c.1388	p.A463D	1.000	NULL	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX38	HGNC	ENSG00000140829	tier1	-	-	51	0	0.00	45	4	8.16
ENSG00000265788	0	genome.wustl.edu	37	17	25988693	25988702	+	RNA	DEL	CACAGGTGGC	CACAGGTGGC	-			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	CACAGGTGGC	CACAGGTGGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	17	25988693	25988702	CACAGGTGGC	-	DEL	ENSG00000265788	ENST00000583179	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.006:0.055:0.065:0.094:0.091:0.069:0.077:0.073:0.052	-	-	-	no_errors	RP11-19P22.5	Clone_based_vega_gene	ENSG00000265788	tier1			NA	NA	NA	NA	NA	NA
DGCR5	0	genome.wustl.edu	37	22	18981968	18981968	+	RNA	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	22	18981968	18981968	C	T	SNP	DGCR5	ENST00000438934	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	DGCR5	HGNC	ENSG00000237517	tier1	-	-	39	0	0.00	30	4	11.76
NT5C3AP1	0	genome.wustl.edu	37	4	118496711	118496711	+	RNA	SNP	T	T	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	4	118496711	118496711	T	A	SNP	NT5C3AP1	ENST00000441170	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.925	-	-	-	no_errors	NT5C3AP1	HGNC	ENSG00000213492	tier1	-	-	57	0	0.00	31	16	34.04
MXRA5	0	genome.wustl.edu	37	X	3241893	3241893	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	X	3241893	3241893	C	A	SNP	MXRA5	ENST00000217939	human	ensembl	74_37	-1	known	missense	c.1833	p.W611C	1.000	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MXRA5	HGNC	ENSG00000101825	tier1	-	-	35	0	0.00	35	4	10.26
SF3A3	0	genome.wustl.edu	37	1	38442606	38442606	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	1	38442606	38442606	C	T	SNP	SF3A3	ENST00000373019	human	ensembl	74_37	-1	known	missense	c.955	p.D319N	1.000	NULL	pfam_DUF3449,pfam_SF3a60_bindingd,pfscan_Znf_C2H2_matrin	-	no_errors	SF3A3	HGNC	ENSG00000183431	tier1	-	-	65	0	0.00	41	31	43.06
MTR	0	genome.wustl.edu	37	1	236978947	236978947	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	1	236978947	236978947	C	A	SNP	MTR	ENST00000366577	human	ensembl	74_37	+1	known	missense	c.653	p.A218D	0.271	pfam_S_MeTrfase,superfamily_S_MeTrfase,pirsf_MetH,pfscan_S_MeTrfase,tigrfam_MetH	pfam_S_MeTrfase,pfam_VitB12-dep_Met_synth_activ_dom,pfam_Pterin-binding,pfam_Cbl-bd_cap,pfam_Cobalamin-bd,superfamily_VitB12-dep_Met_synth_activ_dom,superfamily_S_MeTrfase,superfamily_Dihydropteroate_synth-like,superfamily_Cobalamin-bd,superfamily_Cbl-bd_cap,pirsf_MetH,pfscan_VitB12-dep_Met_synth_activ_dom,pfscan_S_MeTrfase,pfscan_Pterin-binding,tigrfam_MetH	-	no_errors	MTR	HGNC	ENSG00000116984	tier1	-	-	45	0	0.00	39	4	9.30
OR52R1	0	genome.wustl.edu	37	11	4825681	4825681	+	Frame_Shift_Del	DEL	T	T	-			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	11	4825681	4825681	T	-	DEL	OR52R1	ENST00000380382	human	ensembl	74_37	-1	known	frame_shift_del	c.167	p.N56fs	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52R1	HGNC	ENSG00000176937	tier1			37	0	0.00	41	7	14.58
ZFYVE19	0	genome.wustl.edu	37	15	41099899	41099900	+	Frame_Shift_Ins	INS	-	-	GGGGC			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	15	41099899	41099900	-	GGGGC	INS	ZFYVE19	ENST00000355341	human	ensembl	74_37	+1	known	frame_shift_ins	c.112_113	p.A42fs	0.028:0.002	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE19	HGNC	ENSG00000166140	tier1			NA	NA	NA	NA	NA	NA
KCNC4	0	genome.wustl.edu	37	1	110768794	110768794	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	1	110768794	110768794	C	T	SNP	KCNC4	ENST00000369787	human	ensembl	74_37	+1	known	missense	c.1813	p.R605W	1.000	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_K_chnl_volt-dep_Kv3_ID,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv3.4,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9	-	no_errors	KCNC4	HGNC	ENSG00000116396	tier1	rs200184574	-	140	0	0.00	14	39	73.58
MAGEA11	0	genome.wustl.edu	37	X	148798137	148798137	+	Nonsense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	X	148798137	148798137	G	T	SNP	MAGEA11	ENST00000355220	human	ensembl	74_37	+1	known	nonsense	c.991	p.E331*	0.004	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA11	HGNC	ENSG00000185247	tier1	-	-	26	0	0.00	37	4	9.76
LPCAT3	0	genome.wustl.edu	37	12	7090930	7090930	+	RNA	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	12	7090930	7090930	G	T	SNP	LPCAT3	ENST00000536971	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	LPCAT3	HGNC	ENSG00000111684	tier1	-	-	46	0	0.00	30	4	11.76
LRP1B	0	genome.wustl.edu	37	2	141533723	141533723	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	141533723	141533723	C	A	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.5444	p.R1815L	0.985	NULL	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	87	0	0.00	58	6	9.23
MUC5B	0	genome.wustl.edu	37	11	1267347	1267347	+	Silent	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	11	1267347	1267347	C	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.9246	p.T3082	0.031	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	75	0	0.00	18	5	21.74
MTMR12	0	genome.wustl.edu	37	5	32268807	32268807	+	Missense_Mutation	SNP	C	C	G			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	5	32268807	32268807	C	G	SNP	MTMR12	ENST00000382142	human	ensembl	74_37	-1	known	missense	c.583	p.V195L	0.996	NULL	pfam_Myotubularin_assoc	-	no_errors	MTMR12	HGNC	ENSG00000150712	tier1	-	-	40	0	0.00	47	5	9.62
CASP2	0	genome.wustl.edu	37	7	142991867	142991867	+	Splice_Site	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	7	142991867	142991867	G	T	SNP	CASP2	ENST00000310447	human	ensembl	74_37	+1	known	splice_site	c.747+1	e6+1	1.000	-	-	-	no_errors	CASP2	HGNC	ENSG00000106144	tier1	-	-	74	0	0.00	40	4	9.09
BRINP3	0	genome.wustl.edu	37	1	190067251	190067251	+	Missense_Mutation	SNP	T	T	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	1	190067251	190067251	T	A	SNP	BRINP3	ENST00000367462	human	ensembl	74_37	-1	known	missense	c.2198	p.K733M	1.000	NULL	pfam_MACPF,smart_MACPF	-	no_errors	BRINP3	HGNC	ENSG00000162670	tier1	-	-	41	0	0.00	0	35	100.00
CNTNAP3B	0	genome.wustl.edu	37	9	43844210	43844210	+	Missense_Mutation	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	9	43844210	43844210	G	A	SNP	CNTNAP3B	ENST00000377564	human	ensembl	74_37	+1	known	missense	c.1544	p.R515K	0.863	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP3B	HGNC	ENSG00000154529	tier1	-	-	79	0	0.00	39	24	38.10
CD3G	0	genome.wustl.edu	37	11	118222368	118222368	+	Silent	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	11	118222368	118222368	C	A	SNP	CD3G	ENST00000532917	human	ensembl	74_37	+1	known	silent	c.465	p.P155	0.989	pfscan_Phos_immunorcpt_sig_ITAM	pfam_Phos_immunorcpt_sig_ITAM,smart_Ig_sub2,smart_Phos_immunorcpt_sig_ITAM,pfscan_Phos_immunorcpt_sig_ITAM	-	no_errors	CD3G	HGNC	ENSG00000160654	tier1	-	-	56	0	0.00	43	4	8.51
ENSG00000258973	0	genome.wustl.edu	37	14	24802126	24802126	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	14	24802126	24802126	C	T	SNP	ENSG00000258973	ENST00000555591	human	ensembl	74_37	-1	putative	missense	c.427	p.G143R	0.999	NULL	NULL	-	no_errors	RP11-934B9.3	Clone_based_vega_gene	ENSG00000258973	tier1	-	-	35	0	0.00	29	4	12.12
ENSG00000266981	0	genome.wustl.edu	37	17	33518303	33518303	+	RNA	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	17	33518303	33518303	G	T	SNP	ENSG00000266981	ENST00000590144	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.998	-	-	-	no_errors	RP11-799D4.2	Clone_based_vega_gene	ENSG00000266981	tier1	-	-	26	0	0.00	13	3	18.75
ENSG00000229502	0	genome.wustl.edu	37	6	158296072	158296072	+	RNA	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	6	158296072	158296072	C	A	SNP	ENSG00000229502	ENST00000422776	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-52J3.2	Clone_based_vega_gene	ENSG00000229502	tier1	-	-	42	0	0.00	44	4	8.33
ENSG00000254035	0	genome.wustl.edu	37	5	178396498	178396498	+	RNA	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	5	178396498	178396498	C	A	SNP	ENSG00000254035	ENST00000519491	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-281O15.4	Clone_based_vega_gene	ENSG00000254035	tier1	-	-	59	0	0.00	41	4	8.89
UGT3A1	0	genome.wustl.edu	37	5	35965701	35965701	+	Silent	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	5	35965701	35965701	G	A	SNP	UGT3A1	ENST00000274278	human	ensembl	74_37	-1	known	silent	c.630	p.F210	0.001	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT3A1	HGNC	ENSG00000145626	tier1	-	-	57	0	0.00	30	47	61.04
NOTCH3	0	genome.wustl.edu	37	19	15300239	15300239	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	19	15300239	15300239	C	A	SNP	NOTCH3	ENST00000263388	human	ensembl	74_37	-1	known	missense	c.1037	p.G346V	1.000	pirsf_Notch,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_dom,pfam_Notch_NODP_dom,pfam_Notch_NOD_dom,pfam_EGF_extracell,pfam_DUF3454_notch,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_3,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH3	HGNC	ENSG00000074181	tier1	-	-	31	0	0.00	20	4	16.67
KCTD13	0	genome.wustl.edu	37	16	29934439	29934439	+	Frame_Shift_Del	DEL	T	T	-			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	16	29934439	29934439	T	-	DEL	KCTD13	ENST00000561540	human	ensembl	74_37	-1	putative	frame_shift_del	c.486	p.G163fs	0.001	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	KCTD13	HGNC	ENSG00000174943	tier1			48	0	0.00	22	2	8.33
AMER3	0	genome.wustl.edu	37	2	131521735	131521735	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	131521735	131521735	C	A	SNP	AMER3	ENST00000321420	human	ensembl	74_37	+1	known	missense	c.2090	p.P697Q	0.000	NULL	pfam_Uncharacterised_FAM123	-	no_errors	AMER3	HGNC	ENSG00000178171	tier1	-	-	47	0	0.00	26	4	13.33
MAP9	0	genome.wustl.edu	37	4	156268989	156268989	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	4	156268989	156268989	C	A	SNP	MAP9	ENST00000311277	human	ensembl	74_37	-1	known	missense	c.1890	p.E630D	0.015	NULL	NULL	-	no_errors	MAP9	HGNC	ENSG00000164114	tier1	-	-	29	0	0.00	37	4	9.76
CCDC33	0	genome.wustl.edu	37	15	74564053	74564053	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	15	74564053	74564053	C	T	SNP	CCDC33	ENST00000321288	human	ensembl	74_37	+1	known	missense	c.1165	p.R389W	0.812	NULL	pfam_C2_dom,superfamily_C2_dom	-	no_errors	CCDC33	HGNC	ENSG00000140481	tier1	rs201603982	-	71	0	0.00	51	17	25.00
LRTM1	0	genome.wustl.edu	37	3	54952905	54952905	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	3	54952905	54952905	C	A	SNP	LRTM1	ENST00000273286	human	ensembl	74_37	-1	known	missense	c.619	p.G207C	0.049	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRTM1	HGNC	ENSG00000144771	tier1	-	-	35	0	0.00	12	3	20.00
ZBTB41	0	genome.wustl.edu	37	1	197127605	197127605	+	RNA	SNP	T	T	C			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	1	197127605	197127605	T	C	SNP	ZBTB41	ENST00000467322	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	ZBTB41	HGNC	ENSG00000177888	tier1	rs115447450	GMAF=0.0005	32	0	0.00	9	58	86.57
BSN	0	genome.wustl.edu	37	3	49695575	49695575	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	3	49695575	49695575	G	T	SNP	BSN	ENST00000296452	human	ensembl	74_37	+1	known	missense	c.8586	p.E2862D	0.996	NULL	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	-	no_errors	BSN	HGNC	ENSG00000164061	tier1	-	-	113	0	0.00	36	4	10.00
DCC	0	genome.wustl.edu	37	18	50985606	50985606	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	18	50985606	50985606	C	T	SNP	DCC	ENST00000442544	human	ensembl	74_37	+1	known	missense	c.3397	p.R1133W	1.000	pfam_Neogenin_C	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323	tier1	-	-	52	0	0.00	11	19	63.33
PUS3	0	genome.wustl.edu	37	11	125765477	125765477	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	11	125765477	125765477	G	T	SNP	PUS3	ENST00000227474	human	ensembl	74_37	-1	known	missense	c.586	p.R196S	1.000	superfamily_PsdUridine_synth_cat_dom,tigrfam_PsdUridine_synth_TruA	pfam_PsdUridine_synth_TruA_a/b_dom,superfamily_PsdUridine_synth_cat_dom,tigrfam_PsdUridine_synth_TruA	-	no_errors	PUS3	HGNC	ENSG00000110060	tier1	-	-	40	0	0.00	20	3	13.04
DNAH7	0	genome.wustl.edu	37	2	196681510	196681510	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	196681510	196681510	C	A	SNP	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	missense	c.9603	p.M3201I	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997	tier1	-	-	41	0	0.00	42	5	10.64
ITGA6	0	genome.wustl.edu	37	2	173349540	173349540	+	Missense_Mutation	SNP	A	A	G			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	173349540	173349540	A	G	SNP	ITGA6	ENST00000264106	human	ensembl	74_37	+1	known	missense	c.1697	p.E566G	0.998	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA6	HGNC	ENSG00000091409	tier1	-	-	31	0	0.00	4	13	76.47
RSPH1	0	genome.wustl.edu	37	21	43905899	43905899	+	Silent	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	21	43905899	43905899	G	A	SNP	RSPH1	ENST00000291536	human	ensembl	74_37	-1	known	silent	c.381	p.T127	1.000	pfam_MORN,smart_MORN	pfam_MORN,smart_MORN	-	no_errors	RSPH1	HGNC	ENSG00000160188	tier1	-	-	53	0	0.00	33	5	13.16
KRT77	0	genome.wustl.edu	37	12	53086400	53086400	+	Missense_Mutation	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	12	53086400	53086400	G	A	SNP	KRT77	ENST00000341809	human	ensembl	74_37	-1	known	missense	c.1232	p.S411L	0.560	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT77	HGNC	ENSG00000189182	tier1	rs201690097	GMAF=0.0005	39	0	0.00	11	13	54.17
RAB11FIP5	0	genome.wustl.edu	37	2	73316336	73316336	+	Missense_Mutation	SNP	A	A	G			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	73316336	73316336	A	G	SNP	RAB11FIP5	ENST00000258098	human	ensembl	74_37	-1	known	missense	c.539	p.L180P	1.000	superfamily_C2_dom	pfam_Rab-bd_FIP-RBD,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RAB11FIP5	HGNC	ENSG00000135631	tier1	-	-	51	0	0.00	24	4	14.29
DNAH8	0	genome.wustl.edu	37	6	38816506	38816506	+	Missense_Mutation	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	6	38816506	38816506	G	A	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	missense	c.4477	p.V1493I	0.001	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721	tier1	-	-	29	0	0.00	46	43	44.33
LRRTM4	0	genome.wustl.edu	37	2	77746658	77746658	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	77746658	77746658	C	T	SNP	LRRTM4	ENST00000409911	human	ensembl	74_37	-1	known	missense	c.340	p.E114K	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM4	HGNC	ENSG00000176204	tier1	-	-	33	0	0.00	9	41	82.00
VANGL1	0	genome.wustl.edu	37	1	116206718	116206718	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	1	116206718	116206718	G	T	SNP	VANGL1	ENST00000310260	human	ensembl	74_37	+1	known	missense	c.641	p.R214L	0.633	pfam_Strabismus,pirsf_Strabismus	pfam_Strabismus,pirsf_Strabismus	-	no_errors	VANGL1	HGNC	ENSG00000173218	tier1	-	-	69	0	0.00	38	4	9.52
HS3ST6	0	genome.wustl.edu	37	16	1961876	1961876	+	Silent	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	16	1961876	1961876	G	A	SNP	HS3ST6	ENST00000293937	human	ensembl	74_37	-1	known	silent	c.744	p.S248	0.988	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST6	HGNC	ENSG00000162040	tier1	-	-	131	1	0.76	59	45	43.27
OR10Q1	0	genome.wustl.edu	37	11	57996225	57996225	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	11	57996225	57996225	C	T	SNP	OR10Q1	ENST00000316770	human	ensembl	74_37	-1	known	missense	c.123	p.M41I	0.003	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10Q1	HGNC	ENSG00000180475	tier1	-	-	41	0	0.00	5	21	80.77
PKHD1	0	genome.wustl.edu	37	6	51619707	51619707	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	6	51619707	51619707	C	T	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	missense	c.8672	p.R2891H	0.009	NULL	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927	tier1	-	-	8	0	0.00	9	21	70.00
ASAP1	0	genome.wustl.edu	37	8	131414143	131414143	+	Nonsense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	8	131414143	131414143	G	T	SNP	ASAP1	ENST00000357668	human	ensembl	74_37	-1	known	nonsense	c.47	p.S16*	1.000	NULL	pfam_ArfGAP,pfam_SH3_domain,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_ArfGAP,prints_ArfGAP,prints_p67phox	-	no_errors	ASAP1	HGNC	ENSG00000153317	tier1	-	-	35	0	0.00	43	4	8.51
GPR50	0	genome.wustl.edu	37	X	150349083	150349083	+	Missense_Mutation	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	X	150349083	150349083	G	A	SNP	GPR50	ENST00000218316	human	ensembl	74_37	+1	known	missense	c.1028	p.R343H	0.041	prints_Mel_rcpt_1X	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Mel_rcpt_1X,prints_GPCR_Rhodpsn,prints_Melatonin_rcpt,prints_NPY_rcpt	-	no_errors	GPR50	HGNC	ENSG00000102195	tier1	-	-	20	0	0.00	0	33	100.00
GPR19	0	genome.wustl.edu	37	12	12815222	12815222	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	12	12815222	12815222	G	T	SNP	GPR19	ENST00000332427	human	ensembl	74_37	-1	known	missense	c.161	p.T54K	0.140	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR19	HGNC	ENSG00000183150	tier1	-	-	76	0	0.00	34	4	10.53
FZD10	0	genome.wustl.edu	37	12	130649050	130649050	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	12	130649050	130649050	G	T	SNP	FZD10	ENST00000229030	human	ensembl	74_37	+1	known	missense	c.1563	p.W521C	1.000	pfam_Frizzled,pfscan_GPCR_2-like,prints_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD10	HGNC	ENSG00000111432	tier1	-	-	78	0	0.00	36	4	10.00
LOC100996291	0	genome.wustl.edu	37	17	76267801	76267801	+	RNA	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	17	76267801	76267801	C	T	SNP	LOC100996291	ENST00000374945	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-219G17.4	Clone_based_vega_gene	ENSG00000204277	tier1	-	-	32	0	0.00	19	7	26.92
SHROOM4	0	genome.wustl.edu	37	X	50377783	50377784	+	Frame_Shift_Ins	INS	-	-	C			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	X	50377783	50377784	-	C	INS	SHROOM4	ENST00000289292	human	ensembl	74_37	-1	known	frame_shift_ins	c.1290_1289	p.S431fs	0.000:0.005	NULL	pfam_ASD2,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM4	HGNC	ENSG00000158352	tier1			15	0	0.00	14	2	12.50
ENSG00000204398	0	genome.wustl.edu	37	13	112240744	112240744	+	RNA	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	13	112240744	112240744	C	T	SNP	ENSG00000204398	ENST00000607406	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-65D24.2	Clone_based_vega_gene	ENSG00000204398	tier1	-	-	44	0	0.00	35	12	25.53
OSR1	0	genome.wustl.edu	37	2	19553480	19553480	+	Silent	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	19553480	19553480	G	A	SNP	OSR1	ENST00000272223	human	ensembl	74_37	-1	known	silent	c.87	p.G29	0.969	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	OSR1	HGNC	ENSG00000143867	tier1	-	-	67	0	0.00	31	4	11.43
LYL1	0	genome.wustl.edu	37	19	13211670	13211670	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	19	13211670	13211670	G	T	SNP	LYL1	ENST00000264824	human	ensembl	74_37	-1	known	missense	c.316	p.P106T	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	LYL1	HGNC	ENSG00000104903	tier1	-	-	51	0	0.00	29	4	12.12
SCN10A	0	genome.wustl.edu	37	3	38798178	38798178	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	3	38798178	38798178	C	T	SNP	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	missense	c.1277	p.R426Q	0.950	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313	tier1	rs143033805	GMAF=0.0005	34	0	0.00	31	15	32.61
MUC2	0	genome.wustl.edu	37	11	1096490	1096490	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	11	1096490	1096490	C	A	SNP	MUC2	ENST00000441003	human	ensembl	74_37	+1	known	missense	c.6515	p.S2172Y	1.000	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788	tier1	-	-	49	0	0.00	25	4	13.79
CLSTN1	0	genome.wustl.edu	37	1	9810040	9810040	+	RNA	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	1	9810040	9810040	G	T	SNP	CLSTN1	ENST00000464286	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CLSTN1	HGNC	ENSG00000171603	tier1	-	-	29	0	0.00	25	4	13.79
KDM2A	0	genome.wustl.edu	37	11	66987031	66987031	+	RNA	DEL	T	T	-			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	11	66987031	66987031	T	-	DEL	KDM2A	ENST00000525379	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.003	-	-	-	no_errors	KDM2A	HGNC	ENSG00000173120	tier1			19	0	0.00	6	3	33.33
DUSP13	0	genome.wustl.edu	37	10	76854531	76854531	+	Missense_Mutation	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	10	76854531	76854531	G	A	SNP	DUSP13	ENST00000491677	human	ensembl	74_37	-1	known	missense	c.887	p.T296M	0.897	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP13	HGNC	ENSG00000079393	tier1	rs150329504	-	49	0	0.00	11	14	56.00
AKAP6	0	genome.wustl.edu	37	14	33014696	33014696	+	Silent	SNP	T	T	C			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	14	33014696	33014696	T	C	SNP	AKAP6	ENST00000280979	human	ensembl	74_37	+1	known	silent	c.837	p.A279	0.977	NULL	smart_Spectrin/alpha-actinin	-	no_errors	AKAP6	HGNC	ENSG00000151320	tier1	-	-	18	0	0.00	17	9	34.62
MYH9	0	genome.wustl.edu	37	22	36680174	36680174	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	22	36680174	36680174	C	A	SNP	MYH9	ENST00000216181	human	ensembl	74_37	-1	known	missense	c.5730	p.M1910I	1.000	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Regulat_G_prot_signal_superfam,superfamily_Prefoldin,superfamily_Myosin_S1_N,superfamily_STAT_TF_coiled-coil,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH9	HGNC	ENSG00000100345	tier1	-	-	43	0	0.00	33	5	13.16
PAPD5	0	genome.wustl.edu	37	16	50263692	50263693	+	RNA	INS	-	-	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	16	50263692	50263693	-	T	INS	PAPD5	ENST00000573002	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:0.737	-	-	-	no_errors	PAPD5	HGNC	ENSG00000121274	tier1			49	0	0.00	24	6	20.00
CCDC103	0	genome.wustl.edu	37	17	42978433	42978433	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	17	42978433	42978433	G	T	SNP	CCDC103	ENST00000410006	human	ensembl	74_37	+1	known	missense	c.67	p.D23Y	1.000	NULL	NULL	-	no_errors	CCDC103	HGNC	ENSG00000167131	tier1	-	-	52	0	0.00	33	4	10.81
ZNF823	0	genome.wustl.edu	37	19	11832715	11832715	+	Missense_Mutation	SNP	T	T	C			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	19	11832715	11832715	T	C	SNP	ZNF823	ENST00000341191	human	ensembl	74_37	-1	known	missense	c.1634	p.H545R	0.952	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF823	HGNC	ENSG00000197933	tier1	-	-	82	0	0.00	27	41	60.29
LOC285556	0	genome.wustl.edu	37	4	100574097	100574097	+	Missense_Mutation	SNP	T	T	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	4	100574097	100574097	T	A	SNP	LOC285556	ENST00000511828	human	ensembl	74_37	-1	putative	missense	c.1709	p.N570I	0.002	NULL	NULL	-	no_errors	RP11-766F14.2	Clone_based_vega_gene	ENSG00000248713	tier1	-	-	60	0	0.00	27	26	49.06
SLC45A3	0	genome.wustl.edu	37	1	205632049	205632049	+	Silent	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	1	205632049	205632049	C	A	SNP	SLC45A3	ENST00000367145	human	ensembl	74_37	-1	known	silent	c.870	p.L290	0.998	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A3	HGNC	ENSG00000158715	tier1	-	-	100	0	0.00	42	4	8.70
NRXN1	0	genome.wustl.edu	37	2	50147836	50147847	+	RNA	DEL	GTGTGTGTGTGT	GTGTGTGTGTGT	-			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	GTGTGTGTGTGT	GTGTGTGTGTGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	50147836	50147847	GTGTGTGTGTGT	-	DEL	NRXN1	ENST00000484192	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001:0.005:0.106:0.113:0.127:0.107:0.109:0.093:0.096:0.025:0.055	-	-	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1			NA	NA	NA	NA	NA	NA
POTEF	0	genome.wustl.edu	37	2	130832537	130832537	+	Silent	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	130832537	130832537	G	A	SNP	POTEF	ENST00000357462	human	ensembl	74_37	-1	known	silent	c.2508	p.I836	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEF	HGNC	ENSG00000196604	tier1	-	-	63	0	0.00	30	4	11.76
DPP3	0	genome.wustl.edu	37	11	66272210	66272210	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	11	66272210	66272210	G	T	SNP	DPP3	ENST00000360510	human	ensembl	74_37	+1	known	missense	c.2006	p.R669L	1.000	pirsf_Dipeptidyl-peptase3	pirsf_Dipeptidyl-peptase3	-	no_errors	DPP3	HGNC	ENSG00000254986	tier1	-	-	58	0	0.00	44	4	8.33
ARHGAP23	0	genome.wustl.edu	37	17	36638789	36638789	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	17	36638789	36638789	G	T	SNP	ARHGAP23	ENST00000431231	human	ensembl	74_37	+1	known	missense	c.2777	p.C926F	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_PDZ,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP23	HGNC	ENSG00000225485	tier1	-	-	101	0	0.00	39	4	9.30
TSGA13	0	genome.wustl.edu	37	7	130370043	130370043	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	7	130370043	130370043	G	T	SNP	TSGA13	ENST00000356588	human	ensembl	74_37	-1	known	missense	c.6	p.S2R	0.566	NULL	NULL	-	no_errors	TSGA13	HGNC	ENSG00000213265	tier1	-	-	51	0	0.00	40	4	9.09
ENSG00000244227	0	genome.wustl.edu	37	3	167621200	167621200	+	RNA	SNP	A	A	G			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	3	167621200	167621200	A	G	SNP	ENSG00000244227	ENST00000459923	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.053	-	-	-	no_errors	RP11-298O21.5	Clone_based_vega_gene	ENSG00000244227	tier1	-	-	40	0	0.00	7	39	84.78
KLK12	0	genome.wustl.edu	37	19	51534120	51534120	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	19	51534120	51534120	C	A	SNP	KLK12	ENST00000250351	human	ensembl	74_37	-1	known	missense	c.515	p.C172F	0.930	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK12	HGNC	ENSG00000186474	tier1	-	-	56	0	0.00	24	4	14.29
PGAM4	0	genome.wustl.edu	37	X	77224422	77224422	+	Silent	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	X	77224422	77224422	C	A	SNP	PGAM4	ENST00000458128	human	ensembl	74_37	-1	known	silent	c.714	p.T238	0.991	tigrfam_Phosphogly_mut1	pfam_His_Pase_superF_clade-1,smart_His_Pase_superF_clade-1,tigrfam_Phosphogly_mut1	-	no_errors	PGAM4	HGNC	ENSG00000226784	tier1	-	-	72	0	0.00	54	5	8.47
POLG2	0	genome.wustl.edu	37	17	62479040	62479040	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	17	62479040	62479040	C	A	SNP	POLG2	ENST00000539111	human	ensembl	74_37	-1	known	missense	c.1187	p.R396I	1.000	pfam_Anticodon-bd,superfamily_Anticodon-bd	pfam_Anticodon-bd,superfamily_Anticodon-bd	-	no_errors	POLG2	HGNC	ENSG00000256525	tier1	-	-	70	0	0.00	51	5	8.93
MARCH11	0	genome.wustl.edu	37	5	16067845	16067845	+	Missense_Mutation	SNP	A	A	G			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	5	16067845	16067845	A	G	SNP	MARCH11	ENST00000332432	human	ensembl	74_37	-1	known	missense	c.944	p.V315A	0.999	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH11	HGNC	ENSG00000183654	tier1	-	-	29	0	0.00	32	15	31.91
USP28	0	genome.wustl.edu	37	11	113711444	113711444	+	Nonsense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	11	113711444	113711444	G	T	SNP	USP28	ENST00000003302	human	ensembl	74_37	-1	known	nonsense	c.410	p.S137*	0.998	NULL	pfam_Peptidase_C19/C67,superfamily_UBA-like,pfscan_Peptidase_C19/C67	-	no_errors	USP28	HGNC	ENSG00000048028	tier1	-	-	65	0	0.00	44	4	8.33
NBPF11	0	genome.wustl.edu	37	1	146055349	146055349	+	Missense_Mutation	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	1	146055349	146055349	G	A	SNP	NBPF11	ENST00000604938	human	ensembl	74_37	-1	known	missense	c.274	p.L92F	0.060	NULL	pfam_NBPF_dom,superfamily_Secretoglobin	-	no_errors	NBPF11	HGNC	ENSG00000152042	tier1	rs200002878	-	10	0	0.00	13	11	45.83
ZNF404	0	genome.wustl.edu	37	19	44377052	44377052	+	Silent	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	19	44377052	44377052	G	T	SNP	ZNF404	ENST00000587539	human	ensembl	74_37	-1	known	silent	c.1314	p.P438	0.747	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF404	HGNC	ENSG00000176222	tier1	-	-	43	0	0.00	39	4	9.30
LOC401286	0	genome.wustl.edu	37	6	168069993	168069993	+	RNA	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	6	168069993	168069993	G	A	SNP	LOC401286	ENST00000609107	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-351J23.2	Clone_based_vega_gene	ENSG00000272549	tier1	-	-	82	0	0.00	43	12	21.82
OTP	0	genome.wustl.edu	37	5	76932753	76932753	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	5	76932753	76932753	C	T	SNP	OTP	ENST00000306422	human	ensembl	74_37	-1	known	missense	c.340	p.A114T	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_HTH_motif,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	OTP	HGNC	ENSG00000171540	tier1	-	-	82	0	0.00	26	18	40.91
C1orf116	0	genome.wustl.edu	37	1	207198249	207198249	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	1	207198249	207198249	G	T	SNP	C1orf116	ENST00000359470	human	ensembl	74_37	-1	known	missense	c.266	p.T89N	0.000	NULL	NULL	-	no_errors	C1orf116	HGNC	ENSG00000182795	tier1	-	-	61	0	0.00	31	4	11.43
CTBP2	0	genome.wustl.edu	37	10	126799600	126799600	+	RNA	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	10	126799600	126799600	G	T	SNP	CTBP2	ENST00000467395	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.214	-	-	-	no_errors	CTBP2	HGNC	ENSG00000175029	tier1	-	-	61	0	0.00	33	4	10.81
SH3RF3	0	genome.wustl.edu	37	2	110107247	110107247	+	Nonsense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	110107247	110107247	G	T	SNP	SH3RF3	ENST00000309415	human	ensembl	74_37	+1	known	nonsense	c.2335	p.E779*	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Znf_RING,smart_SH3_domain,prints_p67phox,pfscan_SH3_domain,pfscan_Znf_RING	-	no_errors	SH3RF3	HGNC	ENSG00000172985	tier1	-	-	75	0	0.00	14	3	17.65
PRRC2B	0	genome.wustl.edu	37	9	134350137	134350137	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	9	134350137	134350137	G	T	SNP	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	missense	c.2621	p.S874I	0.010	NULL	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723	tier1	-	-	35	0	0.00	32	4	11.11
SLC4A3	0	genome.wustl.edu	37	2	220494110	220494111	+	Frame_Shift_Ins	INS	-	-	C			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	220494110	220494111	-	C	INS	SLC4A3	ENST00000273063	human	ensembl	74_37	+1	known	frame_shift_ins	c.462_463	p.H156fs	0.015:0.049	prints_Anion_exchange_3	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange_3,prints_Anion_exchange,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A3	HGNC	ENSG00000114923	tier1			47	0	0.00	17	2	10.53
GLOD4	0	genome.wustl.edu	37	17	681981	681981	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	17	681981	681981	G	T	SNP	GLOD4	ENST00000301329	human	ensembl	74_37	-1	known	missense	c.94	p.L32M	1.000	NULL	NULL	-	no_errors	GLOD4	HGNC	ENSG00000167699	tier1	-	-	60	0	0.00	50	5	9.09
SLCO1B3	0	genome.wustl.edu	37	12	21028281	21028281	+	Silent	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	12	21028281	21028281	G	A	SNP	SLCO1B3	ENST00000553473	human	ensembl	74_37	+1	known	silent	c.840	p.P280	0.016	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1B3	HGNC	ENSG00000111700	tier1	-	-	74	0	0.00	51	17	25.00
EPAS1	0	genome.wustl.edu	37	2	46605046	46605046	+	Silent	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	46605046	46605046	C	T	SNP	EPAS1	ENST00000263734	human	ensembl	74_37	+1	known	silent	c.1263	p.F421	0.731	NULL	pfam_PAS_fold_3,pfam_HIF-1_TAD_C,pfam_HIF_alpha_subunit,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,prints_Nuc_translocat,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	EPAS1	HGNC	ENSG00000116016	tier1	-	-	66	0	0.00	14	8	36.36
DDX18	0	genome.wustl.edu	37	2	118582579	118582579	+	Nonsense_Mutation	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	118582579	118582579	C	T	SNP	DDX18	ENST00000263239	human	ensembl	74_37	+1	known	nonsense	c.1270	p.R424*	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX18	HGNC	ENSG00000088205	tier1	-	-	30	0	0.00	23	4	14.81
PCDH15	0	genome.wustl.edu	37	10	55569141	55569141	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	10	55569141	55569141	C	A	SNP	PCDH15	ENST00000395445	human	ensembl	74_37	-1	novel	missense	c.4669	p.A1557S	0.978	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275	tier1	-	-	45	0	0.00	37	4	9.76
SLC2A10	0	genome.wustl.edu	37	20	45354435	45354435	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	20	45354435	45354435	G	T	SNP	SLC2A10	ENST00000359271	human	ensembl	74_37	+1	known	missense	c.760	p.A254S	1.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt	-	no_errors	SLC2A10	HGNC	ENSG00000197496	tier1	-	-	27	0	0.00	8	3	27.27
KLHL1	0	genome.wustl.edu	37	13	70681572	70681572	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	13	70681572	70681572	G	T	SNP	KLHL1	ENST00000377844	human	ensembl	74_37	-1	known	missense	c.260	p.S87Y	1.000	NULL	pfam_Kelch_1,pfam_Kelch_2,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL1	HGNC	ENSG00000150361	tier1	-	-	68	0	0.00	46	11	19.30
CACNA1F	0	genome.wustl.edu	37	X	49075837	49075837	+	Silent	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	X	49075837	49075837	G	T	SNP	CACNA1F	ENST00000376265	human	ensembl	74_37	-1	known	silent	c.2649	p.L883	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1F	HGNC	ENSG00000102001	tier1	-	-	42	0	0.00	35	4	10.26
DUSP9	0	genome.wustl.edu	37	X	152915639	152915639	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	X	152915639	152915639	G	T	SNP	DUSP9	ENST00000342782	human	ensembl	74_37	+1	known	missense	c.1034	p.R345L	0.993	pirsf_MKP,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP9	HGNC	ENSG00000130829	tier1	-	-	38	0	0.00	40	5	11.11
KCNK13	0	genome.wustl.edu	37	14	90650876	90650876	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	14	90650876	90650876	G	T	SNP	KCNK13	ENST00000282146	human	ensembl	74_37	+1	known	missense	c.756	p.E252D	0.035	pfam_2pore_dom_K_chnl_dom	pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl_THIK,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK13	HGNC	ENSG00000152315	tier1	-	-	39	0	0.00	39	4	9.30
HMCN2	0	genome.wustl.edu	37	9	133294525	133294525	+	RNA	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	9	133294525	133294525	G	A	SNP	HMCN2	ENST00000487727	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HMCN2	HGNC	ENSG00000148357	tier1	-	-	55	0	0.00	45	4	8.16
DACH2	0	genome.wustl.edu	37	X	85404005	85404005	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	X	85404005	85404005	G	T	SNP	DACH2	ENST00000373125	human	ensembl	74_37	+1	known	missense	c.381	p.Q127H	1.000	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	DACH2	HGNC	ENSG00000126733	tier1	-	-	67	0	0.00	30	19	38.78
FCHSD1	0	genome.wustl.edu	37	5	141030652	141030652	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	5	141030652	141030652	G	T	SNP	FCHSD1	ENST00000435817	human	ensembl	74_37	-1	known	missense	c.54	p.F18L	1.000	smart_FCH_dom,pfscan_FCH_dom	pfam_SH3_domain,pfam_SH3_2,pfam_FCH_dom,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain	-	no_errors	FCHSD1	HGNC	ENSG00000197948	tier1	-	-	89	0	0.00	37	4	9.76
CACNA1H	0	genome.wustl.edu	37	16	1250294	1250294	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	16	1250294	1250294	C	T	SNP	CACNA1H	ENST00000348261	human	ensembl	74_37	+1	known	missense	c.842	p.T281M	0.341	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_PKD_2	-	no_errors	CACNA1H	HGNC	ENSG00000196557	tier1	-	-	122	0	0.00	65	23	26.14
ATG5	0	genome.wustl.edu	37	6	106696116	106696116	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	6	106696116	106696116	C	A	SNP	ATG5	ENST00000343245	human	ensembl	74_37	-1	known	missense	c.482	p.R161I	1.000	pfam_Atg5	pfam_Atg5	-	no_errors	ATG5	HGNC	ENSG00000057663	tier1	-	-	93	0	0.00	110	71	39.23
ADARB2	0	genome.wustl.edu	37	10	1313200	1313200	+	Missense_Mutation	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	10	1313200	1313200	G	A	SNP	ADARB2	ENST00000381312	human	ensembl	74_37	-1	known	missense	c.1142	p.T381M	0.034	smart_A_deamin	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADARB2	HGNC	ENSG00000185736	tier1	-	-	45	0	0.00	16	21	56.76
F2RL2	0	genome.wustl.edu	37	5	75914149	75914149	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	5	75914149	75914149	G	T	SNP	F2RL2	ENST00000296641	human	ensembl	74_37	-1	known	missense	c.383	p.T128N	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Prot_act_rcpt_3,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Prot_act_rcpt_3,prints_GPCR_Rhodpsn,prints_Protea_act_rcpt	-	no_errors	F2RL2	HGNC	ENSG00000164220	tier1	-	-	48	0	0.00	35	4	10.26
LAMA3	0	genome.wustl.edu	37	18	21407358	21407358	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	18	21407358	21407358	G	T	SNP	LAMA3	ENST00000313654	human	ensembl	74_37	+1	known	missense	c.2750	p.G917V	0.015	NULL	pfam_EGF_laminin,pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Growth_fac_rcpt_N_dom,superfamily_Galactose-bd-like,superfamily_STAT_TF_coiled-coil,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA3	HGNC	ENSG00000053747	tier1	-	-	21	0	0.00	17	3	15.00
PRKCG	0	genome.wustl.edu	37	19	54395787	54395787	+	Silent	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	19	54395787	54395787	G	A	SNP	PRKCG	ENST00000540413	human	ensembl	74_37	+1	known	silent	c.711	p.E237	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pirsf_Protein_kinase_C_a/b/g,pfscan_C2_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_C2_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g,prints_DAG/PE-bd,prints_C2_dom,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	PRKCG	HGNC	ENSG00000126583	tier1	-	-	204	0	0.00	79	35	30.70
AP3D1	0	genome.wustl.edu	37	19	2129394	2129394	+	Silent	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	19	2129394	2129394	G	A	SNP	AP3D1	ENST00000355272	human	ensembl	74_37	-1	known	silent	c.655	p.L219	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_dsu	pfam_BLV_receptor,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_dsu	-	no_errors	AP3D1	HGNC	ENSG00000065000	tier1	rs199695826	-	78	0	0.00	22	19	46.34
TRIM6-TRIM34	0	genome.wustl.edu	37	11	5655947	5655947	+	Silent	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	11	5655947	5655947	G	A	SNP	TRIM6-TRIM34	ENST00000354852	human	ensembl	74_37	+1	known	silent	c.1668	p.L556	0.017	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM6-TRIM34	HGNC	ENSG00000258588	tier1	-	-	51	0	0.00	28	4	12.50
TMEM205	0	genome.wustl.edu	37	19	11453523	11453523	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	19	11453523	11453523	C	T	SNP	TMEM205	ENST00000354882	human	ensembl	74_37	-1	known	missense	c.538	p.A180T	0.034	NULL	NULL	-	no_errors	TMEM205	HGNC	ENSG00000105518	tier1	-	-	105	0	0.00	56	5	8.20
PRDX3	0	genome.wustl.edu	37	10	120927997	120927997	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	10	120927997	120927997	G	T	SNP	PRDX3	ENST00000298510	human	ensembl	74_37	-1	known	missense	c.766	p.Q256K	0.995	superfamily_Thioredoxin-like_fold	pfam_AhpC/TSA,pfam_Redoxin,pfam_Peroxiredoxin_C,superfamily_Thioredoxin-like_fold	-	no_errors	PRDX3	HGNC	ENSG00000165672	tier1	-	-	91	0	0.00	45	4	8.16
HECW1	0	genome.wustl.edu	37	7	43351444	43351444	+	Missense_Mutation	SNP	A	A	G			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	7	43351444	43351444	A	G	SNP	HECW1	ENST00000395891	human	ensembl	74_37	+1	known	missense	c.110	p.E37G	1.000	NULL	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	HECW1	HGNC	ENSG00000002746	tier1	-	-	27	0	0.00	17	14	45.16
RMDN2	0	genome.wustl.edu	37	2	38179419	38179419	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	38179419	38179419	G	T	SNP	RMDN2	ENST00000402091	human	ensembl	74_37	+1	putative	missense	c.1061	p.R354I	0.023	NULL	NULL	-	no_errors	RMDN2	HGNC	ENSG00000115841	tier1	-	-	28	0	0.00	19	3	13.64
BVES-AS1	0	genome.wustl.edu	37	6	105614546	105614546	+	RNA	SNP	T	T	G			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	6	105614546	105614546	T	G	SNP	BVES-AS1	ENST00000369122	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	BVES-AS1	HGNC	ENSG00000203808	tier1	-	-	66	0	0.00	79	11	12.22
MACF1	0	genome.wustl.edu	37	1	39752957	39752957	+	Splice_Site	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	1	39752957	39752957	G	T	SNP	MACF1	ENST00000317713	human	ensembl	74_37	+1	known	splice_site	c.1524-1	e14-1	1.000	-	-	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1	-	-	44	0	0.00	30	30	50.00
SUPV3L1	0	genome.wustl.edu	37	10	70968644	70968644	+	Silent	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	10	70968644	70968644	G	T	SNP	SUPV3L1	ENST00000359655	human	ensembl	74_37	+1	known	silent	c.2214	p.V738	1.000	NULL	pfam_SUV3_C,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	-	no_errors	SUPV3L1	HGNC	ENSG00000156502	tier1	-	-	29	0	0.00	45	4	8.16
PLEKHA7	0	genome.wustl.edu	37	11	16838747	16838747	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	11	16838747	16838747	C	T	SNP	PLEKHA7	ENST00000448080	human	ensembl	74_37	-1	known	missense	c.1466	p.R489Q	1.000	NULL	pfam_Pleckstrin_homology,pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_WW_dom	-	no_errors	PLEKHA7	HGNC	ENSG00000166689	tier1	-	-	75	0	0.00	42	8	16.00
ZNF502	0	genome.wustl.edu	37	3	44762851	44762851	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	3	44762851	44762851	G	T	SNP	ZNF502	ENST00000296091	human	ensembl	74_37	+1	known	missense	c.542	p.R181I	0.747	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF502	HGNC	ENSG00000196653	tier1	-	-	51	0	0.00	35	4	10.26
TENM3	0	genome.wustl.edu	37	4	183713453	183713453	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	4	183713453	183713453	G	T	SNP	TENM3	ENST00000406950	human	ensembl	74_37	+1	known	missense	c.5628	p.Q1876H	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c-like_dom,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM3	HGNC	ENSG00000218336	tier1	-	-	55	0	0.00	20	4	16.67
LPIN3	0	genome.wustl.edu	37	20	39977780	39977780	+	Silent	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	20	39977780	39977780	C	A	SNP	LPIN3	ENST00000373257	human	ensembl	74_37	+1	known	silent	c.606	p.P202	1.000	NULL	pfam_LNS2,pfam_Lipin_N,superfamily_HAD-like_dom,smart_LNS2	-	no_errors	LPIN3	HGNC	ENSG00000132793	tier1	-	-	48	0	0.00	34	4	10.53
OCRL	0	genome.wustl.edu	37	X	128703302	128703302	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	X	128703302	128703302	C	A	SNP	OCRL	ENST00000371113	human	ensembl	74_37	+1	known	missense	c.1528	p.Q510K	1.000	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	pfam_Endo/exonuclease/phosphatase,pfam_RhoGAP_dom,superfamily_Endo/exonuclease/phosphatase,superfamily_Rho_GTPase_activation_prot,smart_IPPc,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	OCRL	HGNC	ENSG00000122126	tier1	-	-	38	0	0.00	38	4	9.52
MOGS	0	genome.wustl.edu	37	2	74688578	74688578	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	74688578	74688578	C	T	SNP	MOGS	ENST00000233616	human	ensembl	74_37	-1	known	missense	c.2338	p.A780T	0.998	pfam_Glycoside_hydrolase_63,superfamily_6-hairpin_glycosidase-like	pfam_Glycoside_hydrolase_63,superfamily_6-hairpin_glycosidase-like	-	no_errors	MOGS	HGNC	ENSG00000115275	tier1	-	-	63	0	0.00	22	4	14.81
CROCCP2	0	genome.wustl.edu	37	1	16946471	16946471	+	RNA	SNP	G	G	C			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	1	16946471	16946471	G	C	SNP	CROCCP2	ENST00000412962	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	tier1	-	-	131	1	0.76	108	10	8.47
C7orf34	0	genome.wustl.edu	37	7	142636688	142636688	+	Silent	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	7	142636688	142636688	G	T	SNP	C7orf34	ENST00000409607	human	ensembl	74_37	+1	known	silent	c.45	p.G15	0.014	NULL	NULL	-	no_errors	C7orf34	HGNC	ENSG00000165131	tier1	-	-	23	0	0.00	7	3	30.00
PA2G4	0	genome.wustl.edu	37	12	56505265	56505265	+	Silent	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	12	56505265	56505265	C	A	SNP	PA2G4	ENST00000303305	human	ensembl	74_37	+1	known	silent	c.1071	p.L357	1.000	tigrfam_Pap_1	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,tigrfam_Pap_1	-	no_errors	PA2G4	HGNC	ENSG00000170515	tier1	-	-	45	0	0.00	42	4	8.70
PAPD5	0	genome.wustl.edu	37	16	50264565	50264565	+	RNA	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	16	50264565	50264565	G	T	SNP	PAPD5	ENST00000573002	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PAPD5	HGNC	ENSG00000121274	tier1	-	-	35	0	0.00	24	4	14.29
SGOL1	0	genome.wustl.edu	37	3	20212755	20212755	+	RNA	DEL	A	A	-			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	3	20212755	20212755	A	-	DEL	SGOL1	ENST00000460637	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	SGOL1	HGNC	ENSG00000129810	tier1			37	0	0.00	40	5	11.11
DUSP8	0	genome.wustl.edu	37	11	1577819	1577820	+	Frame_Shift_Del	DEL	CG	CG	-			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	CG	CG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	11	1577819	1577820	CG	-	DEL	DUSP8	ENST00000331588	human	ensembl	74_37	-1	known	frame_shift_del	c.1807_1806	p.G603fs	0.233:0.104	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP8	HGNC	ENSG00000184545	tier1			38	0	0.00	7	2	22.22
GSE1	0	genome.wustl.edu	37	16	85694912	85694912	+	Nonsense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	16	85694912	85694912	G	T	SNP	GSE1	ENST00000253458	human	ensembl	74_37	+1	known	nonsense	c.1801	p.E601*	0.947	NULL	pfam_GSE-like	-	no_errors	GSE1	HGNC	ENSG00000131149	tier1	-	-	58	0	0.00	32	14	30.43
ENSG00000222334	0	genome.wustl.edu	37	8	78199114	78199133	+	RNA	DEL	CAGGGGGAACTGGGAGCATT	CAGGGGGAACTGGGAGCATT	-			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	CAGGGGGAACTGGGAGCATT	CAGGGGGAACTGGGAGCATT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	8	78199114	78199133	CAGGGGGAACTGGGAGCATT	-	DEL	ENSG00000222334	ENST00000410402	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.006:0.006:0.004:0.003:0.002:0.001:0.002:0.005:0.008:0.016:0.022:0.026:0.030:0.032:0.032:0.032:0.031:0.028:0.024:0.018	-	-	-	no_errors	AC105242.1	Clone_based_ensembl_gene	ENSG00000222334	tier1			NA	NA	NA	NA	NA	NA
TP53	0	genome.wustl.edu	37	17	7574034	7574034	+	Splice_Site	SNP	C	C	G			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	17	7574034	7574034	C	G	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	splice_site	c.994-1	e9-1	1.000	-	-	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	43	0	0.00	6	30	83.33
TADA3	0	genome.wustl.edu	37	3	9822210	9822210	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	3	9822210	9822210	C	A	SNP	TADA3	ENST00000301964	human	ensembl	74_37	-1	known	missense	c.1130	p.R377L	0.997	pfam_Histone_AcTrfase_su3	pfam_Histone_AcTrfase_su3	-	no_errors	TADA3	HGNC	ENSG00000171148	tier1	-	-	27	0	0.00	20	4	16.67
GPR12	0	genome.wustl.edu	37	13	27333536	27333536	+	Nonsense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	13	27333536	27333536	G	T	SNP	GPR12	ENST00000381436	human	ensembl	74_37	-1	known	nonsense	c.429	p.Y143*	0.998	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR_3/6/12_orphan	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR_3/6/12_orphan,prints_GPR12,prints_GPCR_Rhodpsn	-	no_errors	GPR12	HGNC	ENSG00000132975	tier1	-	-	47	0	0.00	19	4	17.39
SEPT6	0	genome.wustl.edu	37	X	118797518	118797518	+	Nonsense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	X	118797518	118797518	C	A	SNP	SEPT6	ENST00000394617	human	ensembl	74_37	-1	known	nonsense	c.358	p.E120*	1.000	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT6	HGNC	ENSG00000125354	tier1	-	-	40	0	0.00	52	5	8.77
CDON	0	genome.wustl.edu	37	11	125831755	125831755	+	Silent	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	11	125831755	125831755	G	T	SNP	CDON	ENST00000392693	human	ensembl	74_37	-1	known	silent	c.3495	p.V1165	0.755	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CDON	HGNC	ENSG00000064309	tier1	-	-	28	0	0.00	20	4	16.67
TEX101	0	genome.wustl.edu	37	19	43920058	43920058	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	19	43920058	43920058	C	A	SNP	TEX101	ENST00000253435	human	ensembl	74_37	+1	known	missense	c.41	p.S14Y	0.005	NULL	pfam_LY6_UPAR	-	no_errors	TEX101	HGNC	ENSG00000131126	tier1	-	-	62	0	0.00	44	4	8.33
ENSG00000266008	0	genome.wustl.edu	37	19	21880281	21880281	+	RNA	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	19	21880281	21880281	G	A	SNP	ENSG00000266008	ENST00000579236	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.163	-	-	-	no_errors	AC092364.4	Clone_based_ensembl_gene	ENSG00000266008	tier1	-	-	22	0	0.00	6	5	45.45
SLC30A8	0	genome.wustl.edu	37	8	118147610	118147610	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	8	118147610	118147610	C	A	SNP	SLC30A8	ENST00000456015	human	ensembl	74_37	+1	known	missense	c.44	p.A15D	1.000	NULL	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A8	HGNC	ENSG00000164756	tier1	-	-	26	0	0.00	72	13	15.29
CTTN	0	genome.wustl.edu	37	11	70281823	70281823	+	Missense_Mutation	SNP	G	G	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	11	70281823	70281823	G	A	SNP	CTTN	ENST00000538675	human	ensembl	74_37	+1	known	missense	c.914	p.C305Y	0.000	NULL	pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	CTTN	HGNC	ENSG00000085733	tier1	-	-	105	0	0.00	56	33	37.08
ARHGAP23P1	0	genome.wustl.edu	37	16	33739328	33739328	+	RNA	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	16	33739328	33739328	C	A	SNP	ARHGAP23P1	ENST00000567025	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	ARHGAP23P1	HGNC	ENSG00000260781	tier1	-	-	108	0	0.00	62	11	15.07
ENSG00000252305	0	genome.wustl.edu	37	17	14080531	14080531	+	RNA	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	17	14080531	14080531	G	T	SNP	ENSG00000252305	ENST00000516496	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.074	-	-	-	no_errors	SNORA74	RFAM	ENSG00000252305	tier1	-	-	10	0	0.00	14	4	22.22
KIAA0430	0	genome.wustl.edu	37	16	15696480	15696481	+	Frame_Shift_Ins	INS	-	-	AGGAAAGAAGGAGGGAGGCAGAG			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	16	15696480	15696481	-	AGGAAAGAAGGAGGGAGGCAGAG	INS	KIAA0430	ENST00000344181	human	ensembl	74_37	-1	known	frame_shift_ins	c.3339_3338	p.P1114fs	0.000:0.000	NULL	pfam_Limkain_b1_cons_dom,pfam_NYN_limkain-b1,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	KIAA0430	HGNC	ENSG00000166783	tier1			NA	NA	NA	NA	NA	NA
NAPA-AS1	0	genome.wustl.edu	37	19	47998796	47998796	+	RNA	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	19	47998796	47998796	G	T	SNP	NAPA-AS1	ENST00000593284	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NAPA-AS1	HGNC	ENSG00000268061	tier1	-	-	91	0	0.00	33	4	10.81
ZFYVE19	0	genome.wustl.edu	37	15	41101252	41101252	+	RNA	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	15	41101252	41101252	G	T	SNP	ZFYVE19	ENST00000563530	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.190	-	-	-	no_errors	ZFYVE19	HGNC	ENSG00000166140	tier1	-	-	66	0	0.00	43	4	8.51
MTFMT	0	genome.wustl.edu	37	15	65295423	65295423	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	15	65295423	65295423	C	A	SNP	MTFMT	ENST00000220058	human	ensembl	74_37	-1	known	missense	c.1147	p.A383S	1.000	NULL	pfam_Formyl_transf_N,pfam_Formyl_trans_C,superfamily_Formyl_transf_N,superfamily_Formyl_transferase_C-like,tigrfam_Fmt	-	no_errors	MTFMT	HGNC	ENSG00000103707	tier1	-	-	49	0	0.00	33	9	21.43
SCN9A	0	genome.wustl.edu	37	2	167138320	167138321	+	Splice_Site	INS	-	-	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	2	167138320	167138321	-	A	INS	SCN9A	ENST00000303354	human	ensembl	74_37	-1	known	splice_site_ins	c.1978-3_1978-2	e12-2	1.000:0.002	-	-	-	no_errors	SCN9A	HGNC	ENSG00000169432	tier1			22	0	0.00	13	4	23.53
PAGR1	0	genome.wustl.edu	37	16	29828598	29828598	+	Silent	SNP	C	C	A			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	16	29828598	29828598	C	A	SNP	PAGR1	ENST00000609618	human	ensembl	74_37	+1	known	silent	c.550	p.R184	1.000	NULL	NULL	-	no_errors	PAGR1	Uniprot_gn	ENSG00000263136	tier1	-	-	73	0	0.00	41	4	8.89
GRIK2	0	genome.wustl.edu	37	6	102250236	102250236	+	Missense_Mutation	SNP	A	A	G			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	6	102250236	102250236	A	G	SNP	GRIK2	ENST00000421544	human	ensembl	74_37	+1	known	missense	c.1126	p.T376A	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK2	HGNC	ENSG00000164418	tier1	-	-	39	0	0.00	38	34	47.22
HEXDC	0	genome.wustl.edu	37	17	80400419	80400419	+	Missense_Mutation	SNP	A	A	G			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	17	80400419	80400419	A	G	SNP	HEXDC	ENST00000337014	human	ensembl	74_37	+1	known	missense	c.1709	p.E570G	0.000	NULL	pfam_Glyco_hydro_20_cat-core,superfamily_Glycoside_hydrolase_SF	-	no_errors	HEXDC	HGNC	ENSG00000169660	tier1	-	-	76	0	0.00	48	5	9.43
SPTB	0	genome.wustl.edu	37	14	65260164	65260164	+	Silent	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	14	65260164	65260164	G	T	SNP	SPTB	ENST00000389722	human	ensembl	74_37	-1	known	silent	c.2217	p.L739	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Pleckstrin_homology,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTB	HGNC	ENSG00000070182	tier1	-	-	55	0	0.00	30	4	11.76
TNFRSF21	0	genome.wustl.edu	37	6	47202418	47202418	+	Missense_Mutation	SNP	A	A	G			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	6	47202418	47202418	A	G	SNP	TNFRSF21	ENST00000296861	human	ensembl	74_37	-1	known	missense	c.1726	p.F576L	1.000	NULL	pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,pfscan_Death_domain,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_21	-	no_errors	TNFRSF21	HGNC	ENSG00000146072	tier1	-	-	36	0	0.00	58	13	18.31
POLL	0	genome.wustl.edu	37	10	103344559	103344559	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A6Z4-01A-22D-A33E-09	TCGA-SG-A6Z4-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7f4df9e0-c36b-46fd-b7f3-4912fcb9fc49	eb6b6f4d-e3e1-4475-b6be-0e23e379f2a5	10	103344559	103344559	G	T	SNP	POLL	ENST00000299206	human	ensembl	74_37	-1	known	missense	c.691	p.P231T	0.002	NULL	pfam_DNA_pol_lambd_fingers_domain,superfamily_DNA_pol_b-like_N,superfamily_DNA_pol_lambd_fingers_domain,superfamily_BRCT_dom,smart_DNA-dir_DNA_pol_X,pfscan_BRCT_dom,prints_DNA_pol_X_beta-like,prints_DNA_pol_X	-	no_errors	POLL	HGNC	ENSG00000166169	tier1	-	-	32	0	0.00	12	3	20.00
