Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
TRPM6	0	genome.wustl.edu	37	9	77377882	77377882	+	Silent	SNP	C	C	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	9	77377882	77377882	C	T	SNP	TRPM6	ENST00000451710	human	ensembl	74_37	-1	known	silent	c.3705	p.E1235	1.000	NULL	pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	TRPM6	HGNC	ENSG00000119121	tier1	-	-	44	0	0.00	35	11	23.91
PANK1	0	genome.wustl.edu	37	10	91359232	91359232	+	Nonsense_Mutation	SNP	C	C	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	10	91359232	91359232	C	A	SNP	PANK1	ENST00000307534	human	ensembl	74_37	-1	known	nonsense	c.1087	p.E363*	1.000	pfam_Type_II_PanK,tigrfam_Type_II_PanK	pfam_Type_II_PanK,tigrfam_Type_II_PanK	-	no_errors	PANK1	HGNC	ENSG00000152782	tier1	-	-	72	0	0.00	47	5	9.43
FCRL4	0	genome.wustl.edu	37	1	157550228	157550228	+	RNA	SNP	T	T	C			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	1	157550228	157550228	T	C	SNP	FCRL4	ENST00000479869	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FCRL4	HGNC	ENSG00000163518	tier1	-	-	35	0	0.00	45	5	10.00
FOLH1	0	genome.wustl.edu	37	11	49194970	49194970	+	Silent	SNP	A	A	C			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	11	49194970	49194970	A	C	SNP	FOLH1	ENST00000256999	human	ensembl	74_37	-1	known	silent	c.1164	p.P388	1.000	pfam_Peptidase_M28	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	tier1	-	-	110	0	0.00	73	9	10.98
FAM65C	0	genome.wustl.edu	37	20	49211978	49211978	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	20	49211978	49211978	G	T	SNP	FAM65C	ENST00000535356	human	ensembl	74_37	-1	known	missense	c.1978	p.Q660K	1.000	NULL	superfamily_ARM-type_fold,superfamily_Chemokine_IL8-like_dom	-	no_errors	FAM65C	HGNC	ENSG00000042062	tier1	-	-	57	0	0.00	43	4	8.51
LOC101927060	0	genome.wustl.edu	37	17	45177320	45177321	+	RNA	INS	-	-	CGGCCC			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	17	45177320	45177321	-	CGGCCC	INS	LOC101927060	ENST00000571665	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.380:0.408	-	-	-	no_errors	RP11-156P1.3	Clone_based_vega_gene	ENSG00000262879	tier1			NA	NA	NA	NA	NA	NA
HECTD4	0	genome.wustl.edu	37	12	112638508	112638508	+	Missense_Mutation	SNP	G	G	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	12	112638508	112638508	G	A	SNP	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	missense	c.7985	p.A2662V	1.000	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064	tier1	-	-	122	0	0.00	82	13	13.68
RTEL1	0	genome.wustl.edu	37	20	62320973	62320973	+	Missense_Mutation	SNP	T	T	G			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	20	62320973	62320973	T	G	SNP	RTEL1	ENST00000318100	human	ensembl	74_37	+1	known	missense	c.1997	p.M666R	1.000	superfamily_P-loop_NTPase,smart_ATP-dep_Helicase_C,tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	RTEL1	HGNC	ENSG00000258366	tier1	-	-	76	0	0.00	79	12	13.19
COL18A1	0	genome.wustl.edu	37	21	46923945	46923945	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	21	46923945	46923945	C	T	SNP	COL18A1	ENST00000359759	human	ensembl	74_37	+1	known	missense	c.3949	p.L1317F	0.000	NULL	pfam_Collagenase_NC10/endostatin,pfam_DUF959_COL18_N,pfam_Collagen,pfam_Frizzled_dom,superfamily_C-type_lectin_fold,superfamily_ConA-like_lec_gl_sf,superfamily_Frizzled_dom,smart_Frizzled_dom,smart_Laminin_G,pfscan_Frizzled_dom	-	no_errors	COL18A1	HGNC	ENSG00000182871	tier1	-	-	106	0	0.00	48	7	12.73
ENSG00000259198	0	genome.wustl.edu	37	15	40605494	40605494	+	RNA	SNP	G	G	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	15	40605494	40605494	G	T	SNP	ENSG00000259198	ENST00000559030	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.995	-	-	-	no_errors	RP11-133K1.6	Clone_based_vega_gene	ENSG00000259198	tier1	-	-	47	0	0.00	19	4	17.39
ARHGAP29	0	genome.wustl.edu	37	1	94643143	94643144	+	RNA	INS	-	-	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	1	94643143	94643144	-	T	INS	ARHGAP29	ENST00000482481	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ARHGAP29	HGNC	ENSG00000137962	tier1			29	0	0.00	29	3	9.38
MT-RNR2	0	genome.wustl.edu	37	MT	2138	2138	+	RNA	SNP	T	T	C			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	MT	2138	2138	T	C	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR2	HGNC	ENSG00000210082	tier1	-	-	72	0	0.00	10	2	16.67
DOK5	0	genome.wustl.edu	37	20	53092427	53092427	+	RNA	DEL	C	C	-			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	20	53092427	53092427	C	-	DEL	DOK5	ENST00000491469	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.527	-	-	-	no_errors	DOK5	HGNC	ENSG00000101134	tier1			41	0	0.00	15	2	11.76
DYSF	0	genome.wustl.edu	37	2	71896858	71896858	+	Silent	SNP	C	C	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	2	71896858	71896858	C	A	SNP	DYSF	ENST00000413539	human	ensembl	74_37	+1	known	silent	c.5742	p.V1914	0.999	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	DYSF	HGNC	ENSG00000135636	tier1	-	-	91	0	0.00	52	15	22.39
F9	0	genome.wustl.edu	37	X	138612959	138612959	+	Silent	SNP	A	A	G			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	X	138612959	138612959	A	G	SNP	F9	ENST00000218099	human	ensembl	74_37	+1	known	silent	c.36	p.P12	0.001	pirsf_Pept_S1A_FX	pfam_Peptidase_S1,pfam_GLA_domain,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Peptidase_S1,pirsf_Pept_S1A_FX,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Peptidase_S1,prints_Peptidase_S1A,prints_GLA_domain	-	no_errors	F9	HGNC	ENSG00000101981	tier1	-	-	28	0	0.00	15	10	40.00
FHOD3	0	genome.wustl.edu	37	18	34229279	34229281	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	18	34229279	34229281	GGA	-	DEL	FHOD3	ENST00000590592	human	ensembl	74_37	+1	putative	in_frame_del	c.1197_1199	p.E403in_frame_del	1.000:0.917:0.655	superfamily_ARM-type_fold	pfam_FH2_Formin,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FHOD3	HGNC	ENSG00000134775	tier1			25	0	0.00	19	2	9.52
FGFR4	0	genome.wustl.edu	37	5	176523681	176523681	+	Silent	SNP	C	C	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	5	176523681	176523681	C	T	SNP	FGFR4	ENST00000292408	human	ensembl	74_37	+1	known	silent	c.2092	p.L698	1.000	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FGFR4	HGNC	ENSG00000160867	tier1	-	-	104	0	0.00	71	17	19.32
ACTL8	0	genome.wustl.edu	37	1	18152586	18152586	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	1	18152586	18152586	C	T	SNP	ACTL8	ENST00000375406	human	ensembl	74_37	+1	known	missense	c.673	p.R225C	0.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL8	HGNC	ENSG00000117148	tier1	-	-	77	0	0.00	56	16	22.22
BMS1	0	genome.wustl.edu	37	10	43326420	43326422	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	10	43326420	43326422	AGG	-	DEL	BMS1	ENST00000374518	human	ensembl	74_37	+1	known	in_frame_del	c.3725_3727	p.E1246in_frame_del	1.000:1.000:1.000	NULL	pfam_BMS1_TSR1_C,pfam_AARP2CN,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_AARP2CN	-	no_errors	BMS1	HGNC	ENSG00000165733	tier1			41	0	0.00	28	3	9.68
OR52A1	0	genome.wustl.edu	37	11	5172926	5172926	+	Missense_Mutation	SNP	A	A	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	11	5172926	5172926	A	T	SNP	OR52A1	ENST00000328942	human	ensembl	74_37	-1	known	missense	c.674	p.F225Y	0.825	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52A1	HGNC	ENSG00000182070	tier1	-	-	72	0	0.00	56	6	9.68
MARK3	0	genome.wustl.edu	37	14	103969310	103969310	+	Missense_Mutation	SNP	A	A	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	14	103969310	103969310	A	T	SNP	MARK3	ENST00000429436	human	ensembl	74_37	+1	known	missense	c.2008	p.M670L	1.000	superfamily_KA1/Ssp2_C	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MARK3	HGNC	ENSG00000075413	tier1	-	-	110	0	0.00	90	13	12.50
ASTN2	0	genome.wustl.edu	37	9	119488226	119488226	+	Missense_Mutation	SNP	A	A	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	9	119488226	119488226	A	T	SNP	ASTN2	ENST00000313400	human	ensembl	74_37	-1	known	missense	c.2630	p.F877Y	1.000	pfam_MACPF,smart_MACPF	pfam_MACPF,superfamily_Fibronectin_type3,smart_MACPF	-	no_errors	ASTN2	HGNC	ENSG00000148219	tier1	-	-	43	0	0.00	49	21	30.00
KIAA0020	0	genome.wustl.edu	37	9	2833369	2833369	+	Silent	SNP	C	C	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	9	2833369	2833369	C	A	SNP	KIAA0020	ENST00000397885	human	ensembl	74_37	-1	known	silent	c.504	p.G168	0.822	superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	pfam_CPL,superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	-	no_errors	KIAA0020	HGNC	ENSG00000080608	tier1	-	-	86	0	0.00	27	30	52.63
NUP188	0	genome.wustl.edu	37	9	131755818	131755818	+	Silent	SNP	G	G	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	9	131755818	131755818	G	T	SNP	NUP188	ENST00000372577	human	ensembl	74_37	+1	known	silent	c.2862	p.G954	0.293	superfamily_ARM-type_fold	pfam_Nucleoporin_Nup188,superfamily_ARM-type_fold	-	no_errors	NUP188	HGNC	ENSG00000095319	tier1	-	-	50	0	0.00	43	4	8.51
RDH10	0	genome.wustl.edu	37	8	74234977	74234977	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	8	74234977	74234977	G	T	SNP	RDH10	ENST00000240285	human	ensembl	74_37	+1	known	missense	c.834	p.K278N	1.000	NULL	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	RDH10	HGNC	ENSG00000121039	tier1	-	-	57	0	0.00	33	7	17.50
DNMT1	0	genome.wustl.edu	37	19	10251834	10251834	+	Missense_Mutation	SNP	T	T	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	19	10251834	10251834	T	A	SNP	DNMT1	ENST00000359526	human	ensembl	74_37	-1	known	missense	c.3341	p.D1114V	1.000	pirsf_DNA_C5-MeTrfase_1_euk,pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	pirsf_DNA_C5-MeTrfase_1_euk,pfam_C5_MeTfrase,pfam_BAH_dom,pfam_Cytosine_MeTrfase1_RFD,pfam_DMAP1-bd,pfam_Znf_CXXC,smart_BAH_dom,prints_C5_MeTfrase,pfscan_BAH_dom,pfscan_Znf_CXXC	-	no_errors	DNMT1	HGNC	ENSG00000130816	tier1	-	-	45	0	0.00	43	18	29.51
VAMP7	0	genome.wustl.edu	37	X	155119268	155119268	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	X	155119268	155119268	C	A	SNP	VAMP7	ENST00000262640	human	ensembl	74_37	+1	known	missense	c.139	p.H47N	1.000	superfamily_Longin-like_dom,pfscan_Longin_dom	superfamily_Longin-like_dom,pfscan_Longin_dom	-	no_errors	VAMP7	HGNC	ENSG00000124333	tier1	-	-	314	0	0.00	145	39	21.20
FAT3	0	genome.wustl.edu	37	11	92623796	92623796	+	Silent	SNP	T	T	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	11	92623796	92623796	T	A	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	silent	c.13287	p.G4429	0.927	NULL	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	58	0	0.00	37	10	21.28
PTPRB	0	genome.wustl.edu	37	12	71003064	71003064	+	Missense_Mutation	SNP	G	G	C			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	12	71003064	71003064	G	C	SNP	PTPRB	ENST00000334414	human	ensembl	74_37	-1	known	missense	c.764	p.S255C	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Ricin_B_lectin,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRB	HGNC	ENSG00000127329	tier1	-	-	67	0	0.00	32	12	27.27
FMO6P	0	genome.wustl.edu	37	1	171121165	171121165	+	Missense_Mutation	SNP	A	A	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	1	171121165	171121165	A	T	SNP	FMO6P	ENST00000236166	human	ensembl	74_37	+1	novel	missense	c.944	p.D315V	1.000	pfam_Flavin_mOase-like,prints_Flavin_mOase	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,prints_Flavin_mOase,prints_Flavin_mOase_3,prints_Flavin_mOase_1	-	no_errors	FMO6P	HGNC	ENSG00000117507	tier1	-	-	122	0	0.00	97	24	19.83
TBC1D9	0	genome.wustl.edu	37	4	141548601	141548601	+	Missense_Mutation	SNP	T	T	C			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	4	141548601	141548601	T	C	SNP	TBC1D9	ENST00000442267	human	ensembl	74_37	-1	known	missense	c.2893	p.T965A	1.000	NULL	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D9	HGNC	ENSG00000109436	tier1	-	-	61	0	0.00	51	5	8.93
EML6	0	genome.wustl.edu	37	2	55071335	55071335	+	Silent	SNP	G	G	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	2	55071335	55071335	G	A	SNP	EML6	ENST00000356458	human	ensembl	74_37	+1	novel	silent	c.999	p.L333	0.998	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_HELP,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML6	HGNC	ENSG00000214595	tier1	-	-	39	0	0.00	37	4	9.76
LRRC17	0	genome.wustl.edu	37	7	102575070	102575070	+	Missense_Mutation	SNP	T	T	C			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	7	102575070	102575070	T	C	SNP	LRRC17	ENST00000339431	human	ensembl	74_37	+1	known	missense	c.710	p.V237A	0.548	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC17	HGNC	ENSG00000128606	tier1	-	-	98	0	0.00	85	14	14.14
EOMES	0	genome.wustl.edu	37	3	27763427	27763428	+	In_Frame_Ins	INS	-	-	CGGCGC			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	3	27763427	27763428	-	CGGCGC	INS	EOMES	ENST00000449599	human	ensembl	74_37	-1	known	in_frame_ins	c.359_358	p.120in_frame_insGA	0.116:0.075	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	EOMES	HGNC	ENSG00000163508	tier1			NA	NA	NA	NA	NA	NA
BIRC6	0	genome.wustl.edu	37	2	32728303	32728303	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	2	32728303	32728303	G	T	SNP	BIRC6	ENST00000421745	human	ensembl	74_37	+1	known	missense	c.9499	p.G3167C	1.000	NULL	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760	tier1	-	-	15	0	0.00	10	6	37.50
RBMXL3	0	genome.wustl.edu	37	X	114424991	114424991	+	Silent	SNP	C	C	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	X	114424991	114424991	C	T	SNP	RBMXL3	ENST00000424776	human	ensembl	74_37	+1	known	silent	c.987	p.Y329	0.001	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMXL3	HGNC	ENSG00000175718	tier1	-	-	62	0	0.00	26	8	23.53
TIAM2	0	genome.wustl.edu	37	6	155469272	155469272	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	6	155469272	155469272	G	T	SNP	TIAM2	ENST00000456144	human	ensembl	74_37	+1	known	missense	c.1832	p.W611L	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,superfamily_HR1_rho-bd,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM2	HGNC	ENSG00000146426	tier1	-	-	73	0	0.00	46	4	8.00
KLHDC7B	0	genome.wustl.edu	37	22	50988102	50988102	+	Missense_Mutation	SNP	G	G	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	22	50988102	50988102	G	A	SNP	KLHDC7B	ENST00000395676	human	ensembl	74_37	+1	known	missense	c.1507	p.G503S	1.000	NULL	pfam_Kelch_1,smart_Kelch_1	-	no_errors	KLHDC7B	HGNC	ENSG00000130487	tier1	-	-	91	0	0.00	42	13	23.64
IL12RB1	0	genome.wustl.edu	37	19	18186635	18186635	+	Silent	SNP	G	G	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	19	18186635	18186635	G	A	SNP	IL12RB1	ENST00000593993	human	ensembl	74_37	-1	known	silent	c.624	p.F208	0.247	superfamily_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL12RB1	HGNC	ENSG00000096996	tier1	-	-	106	0	0.00	97	14	12.61
LPO	0	genome.wustl.edu	37	17	56342328	56342328	+	Silent	SNP	C	C	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	17	56342328	56342328	C	T	SNP	LPO	ENST00000262290	human	ensembl	74_37	+1	known	silent	c.1512	p.V504	1.000	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	LPO	HGNC	ENSG00000167419	tier1	-	-	78	0	0.00	78	8	9.30
LOC100132891	0	genome.wustl.edu	37	8	72967429	72967436	+	RNA	DEL	AGAATATT	AGAATATT	-			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	AGAATATT	AGAATATT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	8	72967429	72967436	AGAATATT	-	DEL	LOC100132891	ENST00000457356	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.376:0.321:0.267:0.212:0.159:0.106:0.053:0.000	-	-	-	no_errors	RP11-383H13.1	Clone_based_vega_gene	ENSG00000235531	tier1			NA	NA	NA	NA	NA	NA
GRAP2	0	genome.wustl.edu	37	22	40362092	40362092	+	Missense_Mutation	SNP	A	A	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	22	40362092	40362092	A	T	SNP	GRAP2	ENST00000344138	human	ensembl	74_37	+1	known	missense	c.389	p.D130V	1.000	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_SH3_domain,pfam_SH2,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,pfscan_SH2,pfscan_SH3_domain,prints_SH2,prints_SH3_domain	-	no_errors	GRAP2	HGNC	ENSG00000100351	tier1	-	-	85	0	0.00	74	10	11.90
ENSG00000214614	0	genome.wustl.edu	37	16	32896547	32896547	+	RNA	SNP	G	G	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	16	32896547	32896547	G	T	SNP	ENSG00000214614	ENST00000566260	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	RP11-989E6.3	Clone_based_vega_gene	ENSG00000214614	tier1	-	-	118	0	0.00	76	7	8.43
LMAN1L	0	genome.wustl.edu	37	15	75108829	75108829	+	Nonsense_Mutation	SNP	G	G	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	15	75108829	75108829	G	A	SNP	LMAN1L	ENST00000309664	human	ensembl	74_37	+1	known	nonsense	c.392	p.W131*	0.944	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf	-	no_errors	LMAN1L	HGNC	ENSG00000140506	tier1	-	-	108	0	0.00	79	12	13.19
ZNF280D	0	genome.wustl.edu	37	15	56999299	56999299	+	Silent	SNP	G	G	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	15	56999299	56999299	G	A	SNP	ZNF280D	ENST00000267807	human	ensembl	74_37	-1	known	silent	c.9	p.D3	0.987	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF280D	HGNC	ENSG00000137871	tier1	-	-	109	0	0.00	91	16	14.95
KCNIP4	0	genome.wustl.edu	37	4	20852198	20852198	+	Missense_Mutation	SNP	C	C	G			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	4	20852198	20852198	C	G	SNP	KCNIP4	ENST00000382150	human	ensembl	74_37	-1	known	missense	c.193	p.E65Q	1.000	prints_Recoverin	pfam_EF_hand_dom,pfam_SPARC/Testican_Ca-bd-dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	KCNIP4	HGNC	ENSG00000185774	tier1	-	-	76	0	0.00	53	10	15.87
ENSG00000267865	0	genome.wustl.edu	37	19	56220430	56220431	+	RNA	INS	-	-	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	19	56220430	56220431	-	T	INS	ENSG00000267865	ENST00000596293	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CTD-2611O12.8	Clone_based_vega_gene	ENSG00000267865	tier1			29	0	0.00	26	3	10.34
RNF212	0	genome.wustl.edu	37	4	1087327	1087328	+	In_Frame_Ins	INS	-	-	CTGCCCAGGCTGGAGCCAGCC			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	4	1087327	1087328	-	CTGCCCAGGCTGGAGCCAGCC	INS	RNF212	ENST00000333673	human	ensembl	74_37	-1	known	in_frame_ins	c.722_721	p.S241in_frame_insWLAPAWAA	0.085:0.000	NULL	pfscan_Znf_RING	-	no_errors	RNF212	HGNC	ENSG00000178222	tier1			NA	NA	NA	NA	NA	NA
CCR3	0	genome.wustl.edu	37	3	46307342	46307343	+	Frame_Shift_Ins	INS	-	-	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	3	46307342	46307343	-	A	INS	CCR3	ENST00000545097	human	ensembl	74_37	+1	known	frame_shift_ins	c.756_757	p.Y255fs	0.000:0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CCR3,prints_Chemokine_CCR1	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CCR3,prints_Chemokine_CCR1	-	no_errors	CCR3	HGNC	ENSG00000183625	tier1			38	0	0.00	30	3	9.09
ADH7	0	genome.wustl.edu	37	4	100349015	100349015	+	Missense_Mutation	SNP	A	A	G			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	4	100349015	100349015	A	G	SNP	ADH7	ENST00000209665	human	ensembl	74_37	-1	known	missense	c.515	p.I172T	0.348	pfam_ADH_GroES-like,superfamily_GroES-like	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like	-	no_errors	ADH7	HGNC	ENSG00000196344	tier1	-	-	66	0	0.00	53	10	15.87
MT-CO1	0	genome.wustl.edu	37	MT	7240	7240	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	MT	7240	7240	C	T	SNP	MT-CO1	ENST00000361624	human	ensembl	74_37	+1	known	missense	c.1337	p.A446V	NULL	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom,prints_Cyt_c_Oxase_su1	-	no_errors	MT-CO1	HGNC	ENSG00000198804	tier1	-	-	79	0	0.00	18	2	10.00
RBM27	0	genome.wustl.edu	37	5	145640406	145640406	+	Missense_Mutation	SNP	A	A	G			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	5	145640406	145640406	A	G	SNP	RBM27	ENST00000265271	human	ensembl	74_37	+1	known	missense	c.1838	p.N613S	1.000	smart_RRM_dom,pfscan_RRM_dom	pfam_PWI_dom,pfam_Znf_CCCH,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM27	HGNC	ENSG00000091009	tier1	-	-	91	0	0.00	45	17	27.42
SLC12A4	0	genome.wustl.edu	37	16	67986113	67986113	+	Missense_Mutation	SNP	C	C	G			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	16	67986113	67986113	C	G	SNP	SLC12A4	ENST00000422611	human	ensembl	74_37	-1	known	missense	c.897	p.K299N	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_K/Cl_cotranspt_1/3,prints_KCL_cotranspt,prints_K/Cl_cotranspt1,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A4	HGNC	ENSG00000124067	tier1	-	-	53	0	0.00	36	6	14.29
LDLRAP1	0	genome.wustl.edu	37	1	25894558	25894558	+	RNA	SNP	C	C	G			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	1	25894558	25894558	C	G	SNP	LDLRAP1	ENST00000488127	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LDLRAP1	HGNC	ENSG00000157978	tier1	-	-	108	0	0.00	80	27	25.23
GRM3	0	genome.wustl.edu	37	7	86415654	86415654	+	Silent	SNP	G	G	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	7	86415654	86415654	G	A	SNP	GRM3	ENST00000361669	human	ensembl	74_37	+1	known	silent	c.546	p.S182	0.026	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM3	HGNC	ENSG00000198822	tier1	-	-	71	0	0.00	72	9	11.11
ZFX	0	genome.wustl.edu	37	X	24197842	24197842	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	X	24197842	24197842	C	A	SNP	ZFX	ENST00000540034	human	ensembl	74_37	+1	known	missense	c.718	p.Q240K	1.000	pfam_Transcrp_activ_Zfx/Zfy-dom	pfam_Transcrp_activ_Zfx/Zfy-dom,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFX	HGNC	ENSG00000005889	tier1	-	-	43	0	0.00	35	10	22.22
MEFV	0	genome.wustl.edu	37	16	3293509	3293509	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	16	3293509	3293509	C	T	SNP	MEFV	ENST00000219596	human	ensembl	74_37	-1	known	missense	c.1978	p.G660R	0.163	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_DAPIN,pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,superfamily_DEATH-like_dom,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_DAPIN,pfscan_Znf_B-box,prints_Butyrophylin	-	no_errors	MEFV	HGNC	ENSG00000103313	tier1	-	-	43	0	0.00	34	4	10.53
IL23R	0	genome.wustl.edu	37	1	67724171	67724171	+	Missense_Mutation	SNP	A	A	G			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	1	67724171	67724171	A	G	SNP	IL23R	ENST00000347310	human	ensembl	74_37	+1	known	missense	c.1250	p.E417G	0.194	NULL	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL23R	HGNC	ENSG00000162594	tier1	-	-	62	0	0.00	64	15	18.99
KIF6	0	genome.wustl.edu	37	6	39328280	39328280	+	Missense_Mutation	SNP	T	T	G			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	6	39328280	39328280	T	G	SNP	KIF6	ENST00000287152	human	ensembl	74_37	-1	known	missense	c.1973	p.K658T	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF6	HGNC	ENSG00000164627	tier1	-	-	55	0	0.00	30	4	11.76
ZNF677	0	genome.wustl.edu	37	19	53741760	53741760	+	Missense_Mutation	SNP	T	T	C			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	19	53741760	53741760	T	C	SNP	ZNF677	ENST00000333952	human	ensembl	74_37	-1	known	missense	c.220	p.K74E	0.012	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF677	HGNC	ENSG00000197928	tier1	-	-	33	0	0.00	26	4	13.33
CFTR	0	genome.wustl.edu	37	7	117246748	117246748	+	Missense_Mutation	SNP	T	T	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	7	117246748	117246748	T	A	SNP	CFTR	ENST00000003084	human	ensembl	74_37	+1	known	missense	c.2929	p.S977T	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom,tigrfam_cAMP_cl_channel	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM,tigrfam_cAMP_cl_channel	-	no_errors	CFTR	HGNC	ENSG00000001626	tier1	-	-	66	0	0.00	43	6	12.24
PRICKLE3	0	genome.wustl.edu	37	X	49040116	49040117	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	X	49040116	49040117	GT	-	DEL	PRICKLE3	ENST00000536904	human	ensembl	74_37	-1	known	frame_shift_del	c.179_178	p.T60fs	0.149:0.119	NULL	pfam_Znf_LIM,pfam_PET_domain,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	PRICKLE3	HGNC	ENSG00000012211	tier1			27	0	0.00	31	4	11.43
RECQL	0	genome.wustl.edu	37	12	21644546	21644547	+	Frame_Shift_Ins	INS	-	-	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	12	21644546	21644547	-	T	INS	RECQL	ENST00000421138	human	ensembl	74_37	-1	known	frame_shift_ins	c.121_120	p.V40fs	0.028:0.001	NULL	pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_RQC_domain,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	RECQL	HGNC	ENSG00000004700	tier1			33	0	0.00	38	4	9.52
PEG3	0	genome.wustl.edu	37	19	57335692	57335692	+	Missense_Mutation	SNP	G	G	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	19	57335692	57335692	G	A	SNP	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	missense	c.332	p.P111L	0.369	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300	tier1	-	-	70	0	0.00	60	7	10.45
TRIM40	0	genome.wustl.edu	37	6	30114784	30114784	+	Missense_Mutation	SNP	A	A	G			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	6	30114784	30114784	A	G	SNP	TRIM40	ENST00000376724	human	ensembl	74_37	+1	known	missense	c.464	p.H155R	0.000	NULL	pfam_Znf_C3HC4_RING-type,superfamily_tRNA-bd_arm,smart_Znf_RING,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM40	HGNC	ENSG00000204614	tier1	-	-	64	0	0.00	58	13	18.31
RPH3A	0	genome.wustl.edu	37	12	113306340	113306340	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	12	113306340	113306340	C	T	SNP	RPH3A	ENST00000389385	human	ensembl	74_37	+1	known	missense	c.550	p.P184S	0.937	NULL	pfam_C2_dom,pfam_Znf_FYVE-typ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel,prints_Synaptotagmin,prints_C2_dom	-	no_errors	RPH3A	HGNC	ENSG00000089169	tier1	-	-	59	0	0.00	26	9	25.71
TPX2	0	genome.wustl.edu	37	20	30371630	30371630	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	20	30371630	30371630	G	T	SNP	TPX2	ENST00000340513	human	ensembl	74_37	+1	known	missense	c.1427	p.R476I	1.000	pfam_TPX2_central_dom	pfam_TPX2_central_dom,pfam_Aurora-A-bd,pfam_TPX2_dom_C	-	no_errors	TPX2	HGNC	ENSG00000088325	tier1	-	-	129	0	0.00	106	15	12.40
FARSA	0	genome.wustl.edu	37	19	13041116	13041116	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	19	13041116	13041116	G	T	SNP	FARSA	ENST00000314606	human	ensembl	74_37	-1	known	missense	c.424	p.L142M	0.984	NULL	pfam_Phenylalanyl-tRNA_Synthase,pfam_aa-tRNA-synt_IIb_cons-dom,pfam_aa-tRNA-synt_II,pfscan_aa-tRNA-synth_II,tigrfam_Phe-tRNA-synth_IIc_asu	-	no_errors	FARSA	HGNC	ENSG00000179115	tier1	-	-	38	0	0.00	33	4	10.81
SELP	0	genome.wustl.edu	37	1	169580819	169580819	+	Missense_Mutation	SNP	T	T	C			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	1	169580819	169580819	T	C	SNP	SELP	ENST00000263686	human	ensembl	74_37	-1	known	missense	c.1058	p.E353G	0.010	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Sushi_SCR_CCP,prints_Selectin_superfamily	-	no_errors	SELP	HGNC	ENSG00000174175	tier1	-	-	99	0	0.00	84	13	13.40
TNS1	0	genome.wustl.edu	37	2	218712887	218712889	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	2	218712887	218712889	GCT	-	DEL	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	in_frame_del	c.1978_1976	p.Q659in_frame_del	1.000:1.000:0.994	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308	tier1			45	0	0.00	21	3	12.50
CSF2RA	0	genome.wustl.edu	37	X	1419414	1419414	+	Missense_Mutation	SNP	T	T	C			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	X	1419414	1419414	T	C	SNP	CSF2RA	ENST00000417535	human	ensembl	74_37	+1	known	missense	c.841	p.Y281H	0.010	superfamily_Fibronectin_type3	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	-	no_errors	CSF2RA	HGNC	ENSG00000198223	tier1	-	-	339	0	0.00	236	24	9.23
GRIK1	0	genome.wustl.edu	37	21	30927609	30927609	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	21	30927609	30927609	C	T	SNP	GRIK1	ENST00000535441	human	ensembl	74_37	-1	known	missense	c.2377	p.D793N	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK1	HGNC	ENSG00000171189	tier1	-	-	46	0	0.00	37	11	22.92
PIK3AP1	0	genome.wustl.edu	37	10	98386535	98386535	+	Silent	SNP	T	T	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	10	98386535	98386535	T	A	SNP	PIK3AP1	ENST00000339364	human	ensembl	74_37	-1	known	silent	c.1599	p.P533	0.425	NULL	superfamily_Ankyrin_rpt-contain_dom	-	no_errors	PIK3AP1	HGNC	ENSG00000155629	tier1	-	-	76	0	0.00	68	7	9.33
SLC4A3	0	genome.wustl.edu	37	2	220500504	220500504	+	Silent	SNP	G	G	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	2	220500504	220500504	G	T	SNP	SLC4A3	ENST00000273063	human	ensembl	74_37	+1	known	silent	c.2163	p.P721	0.021	pfam_HCO3_transpt_C,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange_3,prints_Anion_exchange,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A3	HGNC	ENSG00000114923	tier1	-	-	74	0	0.00	44	4	8.16
C17orf82	0	genome.wustl.edu	37	17	59489871	59489877	+	Frame_Shift_Del	DEL	GGCCTCG	GGCCTCG	-			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	GGCCTCG	GGCCTCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	17	59489871	59489877	GGCCTCG	-	DEL	C17orf82	ENST00000335108	human	ensembl	74_37	+1	known	frame_shift_del	c.535_541	p.P182fs	0.000:0.000:0.001:0.001:0.000:0.000:0.000	NULL	NULL	-	no_errors	C17orf82	HGNC	ENSG00000187013	tier1			NA	NA	NA	NA	NA	NA
GCC1	0	genome.wustl.edu	37	7	127231635	127231636	+	RNA	INS	-	-	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	7	127231635	127231636	-	T	INS	GCC1	ENST00000473728	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.929:0.928	-	-	-	no_errors	GCC1	HGNC	ENSG00000179562	tier1			30	0	0.00	35	4	10.26
USP6	0	genome.wustl.edu	37	17	5058807	5058807	+	Missense_Mutation	SNP	C	C	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	17	5058807	5058807	C	T	SNP	USP6	ENST00000250066	human	ensembl	74_37	+1	known	missense	c.2734	p.R912W	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Peptidase_C19/C67	-	no_errors	USP6	HGNC	ENSG00000129204	tier1	rs148034086	-	119	0	0.00	90	12	11.76
MAATS1	0	genome.wustl.edu	37	3	119462961	119462961	+	Missense_Mutation	SNP	G	G	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	3	119462961	119462961	G	A	SNP	MAATS1	ENST00000273390	human	ensembl	74_37	+1	known	missense	c.1820	p.R607Q	1.000	NULL	superfamily_S-AdoMet_deCO2ase_core	-	no_errors	MAATS1	HGNC	ENSG00000183833	tier1	-	-	36	0	0.00	20	13	39.39
COL8A2	0	genome.wustl.edu	37	1	36563894	36563920	+	In_Frame_Del	DEL	CCTGAGGGACCCCTCAGGCCAGGCTGC	CCTGAGGGACCCCTCAGGCCAGGCTGC	-			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	CCTGAGGGACCCCTCAGGCCAGGCTGC	CCTGAGGGACCCCTCAGGCCAGGCTGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	1	36563894	36563920	CCTGAGGGACCCCTCAGGCCAGGCTGC	-	DEL	COL8A2	ENST00000303143	human	ensembl	74_37	-1	known	in_frame_del	c.1388_1362	p.QPGLRGPSG455in_frame_del	1.000:1.000:0.941:1.000:1.000:0.996:1.000:1.000:0.958:1.000:1.000:0.986:1.000:0.996:0.997:0.999:0.990:0.626:1.000:1.000:0.941:1.000:1.000:1.000:1.000:1.000:0.998	pfam_Collagen	pfam_Collagen,pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	COL8A2	HGNC	ENSG00000171812	tier1			NA	NA	NA	NA	NA	NA
JARID2	0	genome.wustl.edu	37	6	15497191	15497191	+	Missense_Mutation	SNP	G	G	T			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	6	15497191	15497191	G	T	SNP	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	missense	c.1735	p.A579S	1.000	pfam_TF_JmjN,smart_TF_JmjN,pfscan_TF_JmjN	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083	tier1	-	-	105	1	0.94	48	8	14.29
CLTCL1	0	genome.wustl.edu	37	22	19208953	19208953	+	Missense_Mutation	SNP	G	G	C			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	22	19208953	19208953	G	C	SNP	CLTCL1	ENST00000263200	human	ensembl	74_37	-1	known	missense	c.2743	p.H915D	1.000	pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	pfam_Clathrin_H-chain/VPS_repeat,pfam_Clathrin_H-chain_propeller_rpt,pfam_Clathrin_H-chain_linker_core,superfamily_Clathrin_H-chain_propeller_N,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	-	no_errors	CLTCL1	HGNC	ENSG00000070371	tier1	-	-	50	0	0.00	42	5	10.64
MC3R	0	genome.wustl.edu	37	20	54824448	54824448	+	Silent	SNP	G	G	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	20	54824448	54824448	G	A	SNP	MC3R	ENST00000243911	human	ensembl	74_37	+1	known	silent	c.549	p.S183	0.312	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Melancort_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Melcrt_ACTH_rcpt,prints_Mcort_3_rcpt,prints_GPCR_Rhodpsn,prints_Melancort_rcpt	-	no_errors	MC3R	HGNC	ENSG00000124089	tier1	-	-	27	0	0.00	31	7	18.42
ASL	0	genome.wustl.edu	37	7	65548130	65548130	+	Missense_Mutation	SNP	C	C	A			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	7	65548130	65548130	C	A	SNP	ASL	ENST00000304874	human	ensembl	74_37	+1	known	missense	c.415	p.L139I	0.994	pfam_Fumarate_lyase_N,superfamily_L-Aspartase-like,tigrfam_Argininosuccinate_lyase	pfam_Fumarate_lyase_N,superfamily_L-Aspartase-like,prints_Fumarate_lyase_fam,tigrfam_Argininosuccinate_lyase	-	no_errors	ASL	HGNC	ENSG00000126522	tier1	-	-	28	0	0.00	32	4	11.11
OR5F1	0	genome.wustl.edu	37	11	55762040	55762040	+	Missense_Mutation	SNP	A	A	G			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	11	55762040	55762040	A	G	SNP	OR5F1	ENST00000278409	human	ensembl	74_37	-1	known	missense	c.62	p.L21P	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5F1	HGNC	ENSG00000149133	tier1	-	-	58	0	0.00	45	7	13.46
OR2G3	0	genome.wustl.edu	37	1	247769075	247769075	+	Missense_Mutation	SNP	T	T	C			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	1	247769075	247769075	T	C	SNP	OR2G3	ENST00000320002	human	ensembl	74_37	+1	known	missense	c.188	p.L63P	0.968	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2G3	HGNC	ENSG00000177476	tier1	-	-	57	0	0.00	45	7	13.46
ATP13A4	0	genome.wustl.edu	37	3	193120360	193120360	+	RNA	DEL	A	A	-			TCGA-SG-A849-01A-11D-A351-09	TCGA-SG-A849-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb71b3ce-4a95-4b1e-9a2a-fd6e0de5a8fc	795d6ea6-3fdc-4d98-be37-b1e1eabc1a64	3	193120360	193120360	A	-	DEL	ATP13A4	ENST00000482964	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	ATP13A4	HGNC	ENSG00000127249	tier1			11	0	0.00	6	11	64.71
