Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
C19orf18	0	genome.wustl.edu	37	19	58470001	58470001	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	19	58470001	58470001	G	A	SNP	C19orf18	ENST00000314391	human	ensembl	74_37	-1	known	missense	c.617	p.A206V	0.000	NULL	NULL	-	no_errors	C19orf18	HGNC	ENSG00000177025	tier1	rs139357251	-	67	0	0.00	34	4	10.53
PKD1L3	0	genome.wustl.edu	37	16	72003878	72003878	+	RNA	SNP	C	C	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	16	72003878	72003878	C	T	SNP	PKD1L3	ENST00000335106	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.740	-	-	-	no_errors	PKD1L3	HGNC	ENSG00000187008	tier1	-	-	64	0	0.00	60	29	32.58
PCYOX1L	0	genome.wustl.edu	37	5	148743621	148743627	+	Frame_Shift_Del	DEL	GGTGGGC	GGTGGGC	-			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	GGTGGGC	GGTGGGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	5	148743621	148743627	GGTGGGC	-	DEL	PCYOX1L	ENST00000274569	human	ensembl	74_37	+1	known	frame_shift_del	c.318_324	p.V107fs	1.000:1.000:1.000:0.931:1.000:1.000:0.995	pirsf_Prenylcysteine_Oxase	pfam_Prenylcys_lyase,pirsf_Prenylcysteine_Oxase	-	no_errors	PCYOX1L	HGNC	ENSG00000145882	tier1			NA	NA	NA	NA	NA	NA
BAZ2A	0	genome.wustl.edu	37	12	57011279	57011279	+	Silent	SNP	A	A	G			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	12	57011279	57011279	A	G	SNP	BAZ2A	ENST00000551812	human	ensembl	74_37	-1	known	silent	c.42	p.L14	1.000	NULL	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_dom,superfamily_Znf_FYVE_PHD,smart_Methyl_CpG_DNA-bd,smart_AT_hook_DNA-bd_motif,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2A	HGNC	ENSG00000076108	tier1	-	-	57	0	0.00	41	4	8.89
TTN	0	genome.wustl.edu	37	2	179615352	179615352	+	Missense_Mutation	SNP	T	T	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	2	179615352	179615352	T	A	SNP	TTN	ENST00000360870	human	ensembl	74_37	-1	known	missense	c.11775	p.E3925D	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Titin_Z,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	23	0	0.00	34	9	20.93
KCNJ9	0	genome.wustl.edu	37	1	160057465	160057465	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	1	160057465	160057465	C	T	SNP	KCNJ9	ENST00000368088	human	ensembl	74_37	+1	known	missense	c.1040	p.A347V	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.3	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.3	-	no_errors	KCNJ9	HGNC	ENSG00000162728	tier1	-	-	25	0	0.00	12	3	20.00
PLCL1	0	genome.wustl.edu	37	2	199011618	199011618	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	2	199011618	199011618	G	A	SNP	PLCL1	ENST00000428675	human	ensembl	74_37	+1	known	missense	c.3220	p.A1074T	0.986	NULL	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCL1	HGNC	ENSG00000115896	tier1	-	-	38	0	0.00	35	4	10.26
PRKDC	0	genome.wustl.edu	37	8	48801762	48801763	+	Frame_Shift_Ins	INS	-	-	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	8	48801762	48801763	-	A	INS	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	frame_shift_ins	c.4090_4089	p.N1363fs	0.070:0.066	NULL	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1			17	0	0.00	23	12	34.29
SOX3	0	genome.wustl.edu	37	X	139586860	139586860	+	Silent	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	X	139586860	139586860	G	T	SNP	SOX3	ENST00000370536	human	ensembl	74_37	-1	known	silent	c.366	p.G122	1.000	superfamily_HMG_box_dom	pfam_HMG_box_dom,pfam_TF_SOX,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX3	HGNC	ENSG00000134595	tier1	-	-	40	0	0.00	22	4	15.38
TMEM163	0	genome.wustl.edu	37	2	135470881	135470881	+	Nonsense_Mutation	SNP	C	C	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	2	135470881	135470881	C	A	SNP	TMEM163	ENST00000281924	human	ensembl	74_37	-1	known	nonsense	c.211	p.E71*	1.000	NULL	NULL	-	no_errors	TMEM163	HGNC	ENSG00000152128	tier1	-	-	75	0	0.00	42	4	8.70
BUB1	0	genome.wustl.edu	37	2	111430293	111430293	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	2	111430293	111430293	G	T	SNP	BUB1	ENST00000302759	human	ensembl	74_37	-1	known	missense	c.367	p.Q123K	0.604	pfam_Mad3_BUB1_I,smart_Mad3_BUB1_I	pfam_Mad3_BUB1_I,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Mad3_BUB1_I,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	BUB1	HGNC	ENSG00000169679	tier1	-	-	45	0	0.00	26	3	10.34
CCDC81	0	genome.wustl.edu	37	11	86119267	86119267	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	11	86119267	86119267	G	T	SNP	CCDC81	ENST00000445632	human	ensembl	74_37	+1	known	missense	c.1068	p.Q356H	0.196	NULL	superfamily_IHF-like_DNA-bd_dom	-	no_errors	CCDC81	HGNC	ENSG00000149201	tier1	-	-	34	0	0.00	29	4	12.12
BCLAF1	0	genome.wustl.edu	37	6	136582417	136582417	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	6	136582417	136582417	G	A	SNP	BCLAF1	ENST00000531224	human	ensembl	74_37	-1	known	missense	c.2743	p.R915C	1.000	NULL	NULL	-	no_errors	BCLAF1	HGNC	ENSG00000029363	tier1	rs62431283	-	45	0	0.00	68	16	19.05
PARP14	0	genome.wustl.edu	37	3	122433232	122433232	+	Frame_Shift_Del	DEL	A	A	-			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	3	122433232	122433232	A	-	DEL	PARP14	ENST00000474629	human	ensembl	74_37	+1	known	frame_shift_del	c.3956	p.N1322fs	0.974	pfam_Macro_dom,smart_Macro_dom,pfscan_Macro_dom	pfam_Macro_dom,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_WWE-dom,smart_Macro_dom,pfscan_Macro_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP14	HGNC	ENSG00000173193	tier1			50	0	0.00	30	4	11.76
PCP4L1	0	genome.wustl.edu	37	1	161254154	161254156	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	1	161254154	161254156	GGA	-	DEL	PCP4L1	ENST00000504449	human	ensembl	74_37	+1	known	in_frame_del	c.90_92	p.E34in_frame_del	0.232:0.995:1.000	NULL	NULL	-	no_errors	PCP4L1	HGNC	ENSG00000248485	tier1			45	0	0.00	27	3	10.00
ARAP1	0	genome.wustl.edu	37	11	72396527	72396527	+	RNA	SNP	C	C	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	11	72396527	72396527	C	T	SNP	ARAP1	ENST00000495878	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARAP1	HGNC	ENSG00000186635	tier1	-	-	24	0	0.00	0	15	100.00
NEFL	0	genome.wustl.edu	37	8	24810224	24810224	+	RNA	SNP	A	A	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	8	24810224	24810224	A	T	SNP	NEFL	ENST00000221169	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NEFL	HGNC	ENSG00000104725	tier1	-	-	62	0	0.00	4	20	83.33
SPHKAP	0	genome.wustl.edu	37	2	228856032	228856032	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	2	228856032	228856032	C	T	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	missense	c.4732	p.E1578K	1.000	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	tier1	-	-	33	0	0.00	14	22	61.11
KCNH6	0	genome.wustl.edu	37	17	61619796	61619796	+	Splice_Site	SNP	G	G	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	17	61619796	61619796	G	A	SNP	KCNH6	ENST00000583023	human	ensembl	74_37	+1	known	splice_site	c.2148+1	e9+1	1.000	-	-	-	no_errors	KCNH6	HGNC	ENSG00000173826	tier1	-	-	45	0	0.00	24	9	27.27
SCN1B	0	genome.wustl.edu	37	19	35524582	35524582	+	Silent	SNP	C	C	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	19	35524582	35524582	C	T	SNP	SCN1B	ENST00000262631	human	ensembl	74_37	+1	known	silent	c.387	p.F129	0.277	pfam_Ig_V-set	pfam_Immunoglobulin,pfam_Ig_V-set	-	no_errors	SCN1B	HGNC	ENSG00000105711	tier1	-	-	72	0	0.00	40	4	9.09
RCBTB1	0	genome.wustl.edu	37	13	50123666	50123666	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	13	50123666	50123666	G	T	SNP	RCBTB1	ENST00000258646	human	ensembl	74_37	-1	known	missense	c.973	p.H325N	1.000	NULL	pfam_Reg_chr_condens,pfam_BTB_POZ,superfamily_RCC1/BLIP-II,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RCBTB1	HGNC	ENSG00000136144	tier1	-	-	68	0	0.00	23	4	14.81
SPHKAP	0	genome.wustl.edu	37	2	228855785	228855785	+	Missense_Mutation	SNP	C	C	G			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	2	228855785	228855785	C	G	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	missense	c.4890	p.W1630C	1.000	pfam_AKAP_110_C	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	tier1	-	-	17	0	0.00	10	17	62.96
ENSG00000234978	0	genome.wustl.edu	37	1	142803333	142803333	+	RNA	SNP	G	G	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	1	142803333	142803333	G	A	SNP	ENSG00000234978	ENST00000423385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-423O2.5	Clone_based_vega_gene	ENSG00000234978	tier1	rs79184194	-	50	0	0.00	79	12	13.19
RGMA	0	genome.wustl.edu	37	15	93595268	93595268	+	Silent	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	15	93595268	93595268	G	T	SNP	RGMA	ENST00000329082	human	ensembl	74_37	-1	known	silent	c.600	p.T200	1.000	pfam_RGM_N	pfam_RGM_N,pfam_RGM_C	-	no_errors	RGMA	HGNC	ENSG00000182175	tier1	-	-	63	0	0.00	35	4	10.26
GRB14	0	genome.wustl.edu	37	2	165365287	165365288	+	Frame_Shift_Ins	INS	-	-	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	2	165365287	165365288	-	T	INS	GRB14	ENST00000263915	human	ensembl	74_37	-1	known	frame_shift_ins	c.892_891	p.H297fs	0.105:0.015	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_BPS-dom,pfam_SH2,pfam_Ras-assoc,pfam_Pleckstrin_homology,smart_Ras-assoc,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SH2,prints_SH2	-	no_errors	GRB14	HGNC	ENSG00000115290	tier1			26	0	0.00	28	3	9.68
SACS	0	genome.wustl.edu	37	13	23911370	23911370	+	Missense_Mutation	SNP	G	G	C			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	13	23911370	23911370	G	C	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.6645	p.F2215L	0.975	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	tier1	-	-	40	0	0.00	28	24	46.15
SLC25A39	0	genome.wustl.edu	37	17	42397786	42397786	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	17	42397786	42397786	G	T	SNP	SLC25A39	ENST00000377095	human	ensembl	74_37	-1	known	missense	c.820	p.L274I	0.774	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A39	HGNC	ENSG00000013306	tier1	-	-	70	0	0.00	41	4	8.89
BZRAP1	0	genome.wustl.edu	37	17	56393418	56393418	+	Silent	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	17	56393418	56393418	G	T	SNP	BZRAP1	ENST00000355701	human	ensembl	74_37	-1	known	silent	c.2064	p.I688	1.000	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain	-	no_errors	BZRAP1	HGNC	ENSG00000005379	tier1	-	-	37	0	0.00	23	4	14.81
SFXN4	0	genome.wustl.edu	37	10	120905850	120905850	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	10	120905850	120905850	C	A	SNP	SFXN4	ENST00000355697	human	ensembl	74_37	-1	known	missense	c.834	p.R278S	0.001	pfam_Mtc	pfam_Mtc	-	no_errors	SFXN4	HGNC	ENSG00000183605	tier1	-	-	79	0	0.00	36	4	10.00
CMC1	0	genome.wustl.edu	37	3	28357732	28357733	+	RNA	INS	-	-	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	3	28357732	28357733	-	T	INS	CMC1	ENST00000469102	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.003	-	-	-	no_errors	CMC1	HGNC	ENSG00000187118	tier1			33	0	0.00	55	8	12.70
EML5	0	genome.wustl.edu	37	14	89212617	89212617	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	14	89212617	89212617	G	A	SNP	EML5	ENST00000554922	human	ensembl	74_37	-1	known	missense	c.368	p.S123L	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_HELP,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML5	HGNC	ENSG00000165521	tier1	-	-	27	0	0.00	39	23	37.10
PRKXP1	0	genome.wustl.edu	37	15	101088125	101088126	+	RNA	INS	-	-	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	15	101088125	101088126	-	T	INS	PRKXP1	ENST00000602585	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-526I2.5	Clone_based_vega_gene	ENSG00000270127	tier1			21	0	0.00	19	3	13.64
EHBP1	0	genome.wustl.edu	37	2	63220684	63220684	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	2	63220684	63220684	G	T	SNP	EHBP1	ENST00000263991	human	ensembl	74_37	+1	known	missense	c.2966	p.R989L	0.744	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	EHBP1	HGNC	ENSG00000115504	tier1	-	-	25	0	0.00	33	4	10.81
SCRIB	0	genome.wustl.edu	37	8	144895522	144895522	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	8	144895522	144895522	G	T	SNP	SCRIB	ENST00000320476	human	ensembl	74_37	-1	known	missense	c.526	p.L176M	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_PDZ,pfam_Leu-rich_rpt,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	SCRIB	HGNC	ENSG00000180900	tier1	-	-	34	0	0.00	24	4	13.33
MCOLN1	0	genome.wustl.edu	37	19	7591462	7591462	+	Silent	SNP	G	G	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	19	7591462	7591462	G	A	SNP	MCOLN1	ENST00000264079	human	ensembl	74_37	+1	known	silent	c.375	p.L125	0.969	NULL	pfam_PKD1_2_channel,superfamily_Glycoside_hydrolase_SF	-	no_errors	MCOLN1	HGNC	ENSG00000090674	tier1	-	-	35	0	0.00	45	4	8.16
SP110	0	genome.wustl.edu	37	2	231067394	231067394	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	2	231067394	231067394	G	T	SNP	SP110	ENST00000258381	human	ensembl	74_37	-1	known	missense	c.949	p.Q317K	0.000	NULL	pfam_Sp100,pfam_SAND_dom,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom	-	no_errors	SP110	HGNC	ENSG00000135899	tier1	-	-	42	0	0.00	13	3	18.75
TAF1B	0	genome.wustl.edu	37	2	9989570	9989571	+	Frame_Shift_Ins	INS	-	-	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	2	9989570	9989571	-	A	INS	TAF1B	ENST00000263663	human	ensembl	74_37	+1	known	frame_shift_ins	c.186_187	p.N65fs	0.992:0.991	NULL	pfam_TF_Rrn7	-	no_errors	TAF1B	HGNC	ENSG00000115750	tier1			30	0	0.00	14	3	17.65
ARHGEF37	0	genome.wustl.edu	37	5	149001563	149001564	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	5	149001563	149001564	GT	-	DEL	ARHGEF37	ENST00000333677	human	ensembl	74_37	+1	known	frame_shift_del	c.1273_1274	p.V425fs	0.979:1.000	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom	pfam_DH-domain,pfam_BAR_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF37	HGNC	ENSG00000183111	tier1			19	0	0.00	23	2	8.00
NCOR2	0	genome.wustl.edu	37	12	124911219	124911219	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	12	124911219	124911219	C	T	SNP	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	missense	c.1277	p.R426H	1.000	superfamily_Homeodomain-like	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498	tier1	-	-	26	0	0.00	29	4	12.12
SEC24D	0	genome.wustl.edu	37	4	119666217	119666218	+	Splice_Site	INS	-	-	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	4	119666217	119666218	-	A	INS	SEC24D	ENST00000379735	human	ensembl	74_37	-1	known	splice_site_ins	c.1711-3_1711-2	e13-2	1.000:0.975	-	-	-	no_errors	SEC24D	HGNC	ENSG00000150961	tier1			11	0	0.00	10	2	16.67
OR10G9	0	genome.wustl.edu	37	11	123893856	123893856	+	Missense_Mutation	SNP	T	T	C			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	11	123893856	123893856	T	C	SNP	OR10G9	ENST00000375024	human	ensembl	74_37	+1	known	missense	c.137	p.V46A	0.038	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G9	HGNC	ENSG00000236981	tier1	-	-	76	0	0.00	27	41	60.29
SLC22A31	0	genome.wustl.edu	37	16	89265864	89265864	+	Silent	SNP	G	G	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	16	89265864	89265864	G	A	SNP	SLC22A31	ENST00000562855	human	ensembl	74_37	-1	novel	silent	c.570	p.H190	0.000	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A31	HGNC	ENSG00000259803	tier1	-	-	111	0	0.00	57	13	18.57
APBB2	0	genome.wustl.edu	37	4	40818138	40818138	+	Nonsense_Mutation	SNP	G	G	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	4	40818138	40818138	G	A	SNP	APBB2	ENST00000295974	human	ensembl	74_37	-1	known	nonsense	c.2248	p.Q750*	1.000	NULL	pfam_PTB/PI_dom,pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom,pfscan_WW_dom	-	no_errors	APBB2	HGNC	ENSG00000163697	tier1	-	-	53	0	0.00	35	26	42.62
SURF1	0	genome.wustl.edu	37	9	136221533	136221533	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	9	136221533	136221533	G	T	SNP	SURF1	ENST00000371974	human	ensembl	74_37	-1	known	missense	c.304	p.P102T	1.000	pfam_Surf1/Shy1,pfscan_Surf1/Shy1	pfam_Surf1/Shy1,pfscan_Surf1/Shy1	-	no_errors	SURF1	HGNC	ENSG00000148290	tier1	-	-	36	0	0.00	34	4	10.53
GPR83	0	genome.wustl.edu	37	11	94113534	94113534	+	Missense_Mutation	SNP	G	G	C			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	11	94113534	94113534	G	C	SNP	GPR83	ENST00000243673	human	ensembl	74_37	-1	known	missense	c.1053	p.N351K	0.999	pfam_7TM_GPCR_olfarory/Srsx,prints_GPCR_Rhodpsn,prints_NPY_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	GPR83	HGNC	ENSG00000123901	tier1	-	-	15	0	0.00	2	17	89.47
SPRED3	0	genome.wustl.edu	37	19	38886200	38886200	+	Silent	SNP	C	C	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	19	38886200	38886200	C	A	SNP	SPRED3	ENST00000338502	human	ensembl	74_37	+1	known	silent	c.648	p.G216	0.992	NULL	pfam_Sprouty,pfam_WH1/EVH1,smart_WH1/EVH1,pfscan_WH1/EVH1	-	no_errors	SPRED3	HGNC	ENSG00000188766	tier1	-	-	29	0	0.00	5	7	58.33
BAG5	0	genome.wustl.edu	37	14	104027121	104027121	+	Silent	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	14	104027121	104027121	G	T	SNP	BAG5	ENST00000337322	human	ensembl	74_37	-1	known	silent	c.504	p.I168	0.998	NULL	pfam_BAG_domain,smart_BAG_domain,pfscan_BAG_domain	-	no_errors	BAG5	HGNC	ENSG00000166170	tier1	-	-	51	0	0.00	35	4	10.26
WRNIP1	0	genome.wustl.edu	37	6	2770552	2770552	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	6	2770552	2770552	C	T	SNP	WRNIP1	ENST00000380773	human	ensembl	74_37	+1	known	missense	c.1213	p.R405C	0.912	superfamily_P-loop_NTPase	pfam_MgsA_C,pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_ATPase_dyneun-rel_AAA,pfam_DUF815,pfam_IstB_ATP-bd,pfam_ATPase_AAA-2,superfamily_P-loop_NTPase,smart_Znf_Rad18_put,smart_AAA+_ATPase	-	no_errors	WRNIP1	HGNC	ENSG00000124535	tier1	-	-	63	0	0.00	35	4	10.26
NUGGC	0	genome.wustl.edu	37	8	27927170	27927170	+	Splice_Site	SNP	C	C	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	8	27927170	27927170	C	A	SNP	NUGGC	ENST00000341513	human	ensembl	74_37	-1	known	splice_site	c.149-1	e3-1	1.000	-	-	-	no_errors	NUGGC	HGNC	ENSG00000189233	tier1	-	-	32	0	0.00	22	3	12.00
LOR	0	genome.wustl.edu	37	1	153234265	153234265	+	Silent	SNP	C	C	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	1	153234265	153234265	C	T	SNP	LOR	ENST00000368742	human	ensembl	74_37	+1	known	silent	c.840	p.G280	0.088	NULL	NULL	-	no_errors	LOR	HGNC	ENSG00000203782	tier1	-	-	25	0	0.00	16	14	45.16
NMUR2	0	genome.wustl.edu	37	5	151784153	151784153	+	Silent	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	5	151784153	151784153	G	T	SNP	NMUR2	ENST00000255262	human	ensembl	74_37	-1	known	silent	c.522	p.S174	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NeuromedU_rcpt_2,prints_NeuromedU_rcpt,prints_GPCR_Rhodpsn	-	no_errors	NMUR2	HGNC	ENSG00000132911	tier1	-	-	49	0	0.00	33	4	10.81
SALL3	0	genome.wustl.edu	37	18	76753242	76753242	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	18	76753242	76753242	C	A	SNP	SALL3	ENST00000537592	human	ensembl	74_37	+1	known	missense	c.1251	p.F417L	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463	tier1	-	-	27	0	0.00	8	3	27.27
FOXN3	0	genome.wustl.edu	37	14	89628792	89628792	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	14	89628792	89628792	C	T	SNP	FOXN3	ENST00000261302	human	ensembl	74_37	-1	known	missense	c.1439	p.G480E	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXN3	HGNC	ENSG00000053254	tier1	-	-	43	0	0.00	22	5	18.52
PUM2	0	genome.wustl.edu	37	2	20518400	20518400	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	2	20518400	20518400	G	A	SNP	PUM2	ENST00000361078	human	ensembl	74_37	-1	known	missense	c.58	p.P20S	1.000	NULL	pfam_Pumilio_RNA-bd_rpt,superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	-	no_errors	PUM2	HGNC	ENSG00000055917	tier1	-	-	44	0	0.00	13	3	18.75
PRSS1	0	genome.wustl.edu	37	7	142459667	142459667	+	Silent	SNP	G	G	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	7	142459667	142459667	G	A	SNP	PRSS1	ENST00000311737	human	ensembl	74_37	+1	known	silent	c.243	p.L81	0.003	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS1	HGNC	ENSG00000204983	tier1	-	-	63	0	0.00	94	9	8.74
DAB1	0	genome.wustl.edu	37	1	57476849	57476849	+	Missense_Mutation	SNP	T	T	C			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	1	57476849	57476849	T	C	SNP	DAB1	ENST00000371231	human	ensembl	74_37	-1	known	missense	c.1640	p.E547G	1.000	NULL	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	DAB1	HGNC	ENSG00000173406	tier1	-	-	45	0	0.00	32	7	17.95
CD9	0	genome.wustl.edu	37	12	6334750	6334750	+	RNA	SNP	T	T	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	12	6334750	6334750	T	A	SNP	CD9	ENST00000538418	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	CD9	HGNC	ENSG00000010278	tier1	-	-	11	0	0.00	2	9	75.00
ARHGAP6	0	genome.wustl.edu	37	X	11187750	11187750	+	Missense_Mutation	SNP	G	G	C			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	X	11187750	11187750	G	C	SNP	ARHGAP6	ENST00000337414	human	ensembl	74_37	-1	known	missense	c.1684	p.L562V	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP6	HGNC	ENSG00000047648	tier1	-	-	13	0	0.00	3	22	88.00
LGR4	0	genome.wustl.edu	37	11	27390228	27390228	+	Missense_Mutation	SNP	A	A	G			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	11	27390228	27390228	A	G	SNP	LGR4	ENST00000379214	human	ensembl	74_37	-1	known	missense	c.2042	p.L681P	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_Leu-rich_rpt,pfam_GPCR_Rhodpsn,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,pfscan_GPCR_Rhodpsn_7TM,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn	-	no_errors	LGR4	HGNC	ENSG00000205213	tier1	-	-	56	0	0.00	36	5	12.20
SNX29P2	0	genome.wustl.edu	37	16	29337795	29337795	+	RNA	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	16	29337795	29337795	G	T	SNP	SNX29P2	ENST00000398878	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNX29P2	HGNC	ENSG00000198106	tier1	-	-	99	0	0.00	24	22	47.83
ZNF101	0	genome.wustl.edu	37	19	19790091	19790091	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	19	19790091	19790091	G	T	SNP	ZNF101	ENST00000318110	human	ensembl	74_37	+1	known	missense	c.293	p.G98V	1.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF101	HGNC	ENSG00000181896	tier1	-	-	28	0	0.00	37	5	11.90
PLEKHH1	0	genome.wustl.edu	37	14	68029200	68029200	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	14	68029200	68029200	G	T	SNP	PLEKHH1	ENST00000329153	human	ensembl	74_37	+1	known	missense	c.852	p.E284D	0.071	NULL	pfam_Pleckstrin_homology,pfam_MyTH4_dom,pfam_FERM_central,superfamily_FERM_central,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEKHH1	HGNC	ENSG00000054690	tier1	-	-	35	0	0.00	27	4	12.90
INPP4A	0	genome.wustl.edu	37	2	99182628	99182628	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	2	99182628	99182628	G	A	SNP	INPP4A	ENST00000074304	human	ensembl	74_37	+1	known	missense	c.2431	p.E811K	1.000	NULL	superfamily_C2_dom	-	no_errors	INPP4A	HGNC	ENSG00000040933	tier1	-	-	69	0	0.00	22	11	33.33
CDCP1	0	genome.wustl.edu	37	3	45127316	45127316	+	Silent	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	3	45127316	45127316	G	T	SNP	CDCP1	ENST00000296129	human	ensembl	74_37	-1	known	silent	c.2325	p.S775	0.996	NULL	superfamily_CUB_dom	-	no_errors	CDCP1	HGNC	ENSG00000163814	tier1	-	-	35	0	0.00	25	4	13.79
ATP2A2	0	genome.wustl.edu	37	12	110719652	110719652	+	Nonsense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	12	110719652	110719652	G	T	SNP	ATP2A2	ENST00000539276	human	ensembl	74_37	+1	known	nonsense	c.58	p.E20*	1.000	pfam_ATPase_P-typ_cation-transptr_N,smart_ATPase_P-typ_cation-transptr_N	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A2	HGNC	ENSG00000174437	tier1	-	-	43	0	0.00	13	4	23.53
KIF21A	0	genome.wustl.edu	37	12	39740286	39740286	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	12	39740286	39740286	C	A	SNP	KIF21A	ENST00000395670	human	ensembl	74_37	-1	known	missense	c.1694	p.S565I	1.000	superfamily_ARM-type_fold	pfam_Kinesin_motor_dom,pfam_WD40_repeat,superfamily_P-loop_NTPase,superfamily_WD40_repeat_dom,superfamily_Prefoldin,superfamily_ARM-type_fold,smart_Kinesin_motor_dom,smart_WD40_repeat,pfscan_Kinesin_motor_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Kinesin_motor_dom	-	no_errors	KIF21A	HGNC	ENSG00000139116	tier1	-	-	70	0	0.00	130	35	21.08
CAMKK2	0	genome.wustl.edu	37	12	121698198	121698198	+	Silent	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	12	121698198	121698198	G	T	SNP	CAMKK2	ENST00000545538	human	ensembl	74_37	-1	putative	silent	c.81	p.P27	0.006	smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMKK2	HGNC	ENSG00000110931	tier1	-	-	52	0	0.00	61	11	15.28
FAM159A	0	genome.wustl.edu	37	1	53099179	53099179	+	Missense_Mutation	SNP	G	G	C			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	1	53099179	53099179	G	C	SNP	FAM159A	ENST00000517870	human	ensembl	74_37	+1	known	missense	c.14	p.C5S	1.000	NULL	NULL	-	no_errors	FAM159A	HGNC	ENSG00000182183	tier1	-	-	13	0	0.00	3	7	70.00
UXT	0	genome.wustl.edu	37	X	47516703	47516703	+	RNA	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	X	47516703	47516703	G	T	SNP	UXT	ENST00000460840	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	UXT	HGNC	ENSG00000126756	tier1	-	-	22	0	0.00	8	3	27.27
DIP2A	0	genome.wustl.edu	37	21	47966879	47966879	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	21	47966879	47966879	G	T	SNP	DIP2A	ENST00000318711	human	ensembl	74_37	+1	known	missense	c.2449	p.V817F	0.025	NULL	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2A	HGNC	ENSG00000160305	tier1	-	-	79	0	0.00	46	4	8.00
ABCE1	0	genome.wustl.edu	37	4	146048725	146048725	+	Nonstop_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	4	146048725	146048725	G	T	SNP	ABCE1	ENST00000296577	human	ensembl	74_37	+1	known	nonstop	c.1800	p.*600Y	1.000	NULL	pfam_ABC_transporter-like,pfam_RNaseL-inhib_metal-bd_dom,pfam_4Fe4S-bd_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,prints_ABC_E	-	no_errors	ABCE1	HGNC	ENSG00000164163	tier1	-	-	69	0	0.00	41	4	8.89
PCDHA1	0	genome.wustl.edu	37	5	140167900	140167900	+	Silent	SNP	G	G	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	5	140167900	140167900	G	A	SNP	PCDHA1	ENST00000504120	human	ensembl	74_37	+1	known	silent	c.2025	p.A675	0.004	smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA1	HGNC	ENSG00000204970	tier1	rs143057294	-	61	0	0.00	23	18	43.90
IDS	0	genome.wustl.edu	37	X	148568507	148568507	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	X	148568507	148568507	G	T	SNP	IDS	ENST00000340855	human	ensembl	74_37	-1	known	missense	c.1129	p.L377I	0.990	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	IDS	HGNC	ENSG00000010404	tier1	-	-	33	0	0.00	31	4	11.43
ABCB1	0	genome.wustl.edu	37	7	87175223	87175223	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	7	87175223	87175223	G	T	SNP	ABCB1	ENST00000265724	human	ensembl	74_37	-1	known	missense	c.1843	p.L615I	1.000	pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB1	HGNC	ENSG00000085563	tier1	-	-	31	0	0.00	44	4	8.33
C2CD2L	0	genome.wustl.edu	37	11	118984690	118984690	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	11	118984690	118984690	G	T	SNP	C2CD2L	ENST00000336702	human	ensembl	74_37	+1	known	missense	c.1618	p.V540F	0.998	NULL	superfamily_C2_dom	-	no_errors	C2CD2L	HGNC	ENSG00000172375	tier1	-	-	52	0	0.00	18	3	14.29
UBE2V1	0	genome.wustl.edu	37	20	48698944	48698944	+	RNA	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	20	48698944	48698944	G	T	SNP	UBE2V1	ENST00000396059	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	UBE2V1	HGNC	ENSG00000244687	tier1	-	-	50	0	0.00	40	4	9.09
TPP1	0	genome.wustl.edu	37	11	6637860	6637860	+	RNA	SNP	C	C	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	11	6637860	6637860	C	A	SNP	TPP1	ENST00000528807	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	TPP1	HGNC	ENSG00000166340	tier1	-	-	45	0	0.00	9	3	25.00
DIP2B	0	genome.wustl.edu	37	12	51121576	51121576	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	12	51121576	51121576	G	A	SNP	DIP2B	ENST00000301180	human	ensembl	74_37	+1	known	missense	c.3491	p.G1164D	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2B	HGNC	ENSG00000066084	tier1	-	-	32	0	0.00	36	4	10.00
ZNF81	0	genome.wustl.edu	37	X	47775688	47775688	+	Missense_Mutation	SNP	A	A	C			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	X	47775688	47775688	A	C	SNP	ZNF81	ENST00000338637	human	ensembl	74_37	+1	known	missense	c.1643	p.H548P	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF81	HGNC	ENSG00000197779	tier1	-	-	13	0	0.00	2	21	91.30
SEMA5B	0	genome.wustl.edu	37	3	122642544	122642544	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	3	122642544	122642544	C	T	SNP	SEMA5B	ENST00000451055	human	ensembl	74_37	-1	known	missense	c.1354	p.A452T	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5B	HGNC	ENSG00000082684	tier1	-	-	91	0	0.00	43	10	18.87
ZNF181	0	genome.wustl.edu	37	19	35232821	35232821	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	19	35232821	35232821	C	A	SNP	ZNF181	ENST00000392232	human	ensembl	74_37	+1	known	missense	c.1667	p.T556N	1.000	smart_Znf_BED_prd,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,smart_Znf_BED_prd,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF181	HGNC	ENSG00000197841	tier1	-	-	116	0	0.00	58	13	18.31
CST3	0	genome.wustl.edu	37	20	23616002	23616002	+	Silent	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	20	23616002	23616002	G	T	SNP	CST3	ENST00000376925	human	ensembl	74_37	-1	known	silent	c.246	p.I82	0.008	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CST3	HGNC	ENSG00000101439	tier1	-	-	41	0	0.00	40	6	13.04
DACT1	0	genome.wustl.edu	37	14	59113290	59113290	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	14	59113290	59113290	G	A	SNP	DACT1	ENST00000335867	human	ensembl	74_37	+1	known	missense	c.1949	p.G650D	0.002	NULL	NULL	-	no_errors	DACT1	HGNC	ENSG00000165617	tier1	-	-	151	1	0.66	107	15	12.20
KRT4	0	genome.wustl.edu	37	12	53205597	53205597	+	Silent	SNP	C	C	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	12	53205597	53205597	C	T	SNP	KRT4	ENST00000293774	human	ensembl	74_37	-1	known	silent	c.849	p.L283	1.000	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT4	HGNC	ENSG00000170477	tier1	-	-	47	0	0.00	46	4	8.00
HDC	0	genome.wustl.edu	37	15	50546363	50546363	+	Silent	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	15	50546363	50546363	G	T	SNP	HDC	ENST00000267845	human	ensembl	74_37	-1	known	silent	c.684	p.I228	0.443	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase,prints_Aromatic_deC	-	no_errors	HDC	HGNC	ENSG00000140287	tier1	-	-	63	0	0.00	32	4	11.11
SMPD4	0	genome.wustl.edu	37	2	130934161	130934161	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	2	130934161	130934161	G	T	SNP	SMPD4	ENST00000409031	human	ensembl	74_37	-1	known	missense	c.122	p.A41E	1.000	NULL	NULL	-	no_errors	SMPD4	HGNC	ENSG00000136699	tier1	-	-	107	0	0.00	56	5	8.20
EYA1	0	genome.wustl.edu	37	8	72123391	72123392	+	Frame_Shift_Ins	INS	-	-	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	8	72123391	72123392	-	T	INS	EYA1	ENST00000340726	human	ensembl	74_37	-1	known	frame_shift_ins	c.1698_1697	p.H567fs	1.000:1.000	superfamily_HAD-like_dom,tigrfam_EYA	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA1	HGNC	ENSG00000104313	tier1			38	0	0.00	52	20	27.78
HMGN2P46	0	genome.wustl.edu	37	15	45848230	45848231	+	RNA	INS	-	-	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	15	45848230	45848231	-	T	INS	HMGN2P46	ENST00000313559	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997:0.997	-	-	-	no_errors	HMGN2P46	HGNC	ENSG00000179362	tier1			22	0	0.00	35	6	14.63
PCDHB4	0	genome.wustl.edu	37	5	140503450	140503450	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	5	140503450	140503450	C	T	SNP	PCDHB4	ENST00000194152	human	ensembl	74_37	+1	known	missense	c.1870	p.R624C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB4	HGNC	ENSG00000081818	tier1	-	-	64	0	0.00	44	4	8.33
CAPN2	0	genome.wustl.edu	37	1	223954074	223954074	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	1	223954074	223954074	G	T	SNP	CAPN2	ENST00000295006	human	ensembl	74_37	+1	known	missense	c.1696	p.D566Y	1.000	NULL	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN2	HGNC	ENSG00000162909	tier1	-	-	49	0	0.00	24	3	10.34
BACH1-IT1	0	genome.wustl.edu	37	21	30723982	30723982	+	RNA	SNP	G	G	T			TCGA-SI-A71O-01A-12D-A33E-09	TCGA-SI-A71O-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	33159557-eb32-44de-aaa2-80a9752b3a96	7054e42b-ba0b-4d61-86b0-970d4d7dd6bc	21	30723982	30723982	G	T	SNP	BACH1-IT1	ENST00000504298	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	BACH1-IT1	HGNC	ENSG00000248476	tier1	-	-	49	0	0.00	34	4	10.53
