Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
MTRNR2L6	0	genome.wustl.edu	37	7	142375121	142375121	+	Missense_Mutation	SNP	T	T	C			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	7	142375121	142375121	T	C	SNP	MTRNR2L6	ENST00000604952	human	ensembl	74_37	+1	known	missense	c.59	p.V20A	1.000	NULL	NULL	-	no_errors	MTRNR2L6	HGNC	ENSG00000270672	tier1	-	-	61	0	0.00	53	16	23.19
DUSP1	0	genome.wustl.edu	37	5	172195870	172195870	+	Silent	SNP	G	G	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	5	172195870	172195870	G	A	SNP	DUSP1	ENST00000239223	human	ensembl	74_37	-1	known	silent	c.999	p.T333	0.773	pirsf_MKP	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP,prints_Atypical_DUSP	-	no_errors	DUSP1	HGNC	ENSG00000120129	tier1	-	-	78	0	0.00	33	6	15.38
SCAND3	0	genome.wustl.edu	37	6	28540383	28540383	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	6	28540383	28540383	C	A	SNP	SCAND3	ENST00000452236	human	ensembl	74_37	-1	known	missense	c.3283	p.D1095Y	1.000	superfamily_RNaseH-like_dom	pfam_Tscrpt_reg_SCAN,pfam_Integrase_cat-core,pfam_HATC_dom_C,superfamily_Retrov_capsid_C,superfamily_RNaseH-like_dom,smart_Tscrpt_reg_SCAN,pfscan_Integrase_cat-core,pfscan_Tscrpt_reg_SCAN	-	no_errors	SCAND3	HGNC	ENSG00000232040	tier1	-	-	62	0	0.00	44	7	13.73
UGP2	0	genome.wustl.edu	37	2	64109761	64109761	+	Silent	SNP	G	G	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	2	64109761	64109761	G	T	SNP	UGP2	ENST00000337130	human	ensembl	74_37	+1	known	silent	c.417	p.L139	1.000	pfam_UDPGP_trans,pirsf_UDPGP_trans_subgr	pfam_UDPGP_trans,pirsf_UDPGP_trans_subgr	-	no_errors	UGP2	HGNC	ENSG00000169764	tier1	-	-	59	0	0.00	45	4	8.16
ANKRD11	0	genome.wustl.edu	37	16	89348191	89348191	+	Silent	SNP	G	G	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	16	89348191	89348191	G	A	SNP	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	silent	c.4759	p.L1587	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522	tier1	-	-	43	0	0.00	9	5	35.71
FSCB	0	genome.wustl.edu	37	14	44975802	44975802	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	14	44975802	44975802	C	A	SNP	FSCB	ENST00000340446	human	ensembl	74_37	-1	known	missense	c.389	p.R130I	1.000	NULL	NULL	-	no_errors	FSCB	HGNC	ENSG00000189139	tier1	-	-	52	0	0.00	30	4	11.76
APOBR	0	genome.wustl.edu	37	16	28507458	28507458	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	16	28507458	28507458	G	A	SNP	APOBR	ENST00000564831	human	ensembl	74_37	+1	known	missense	c.1096	p.A366T	0.002	NULL	NULL	-	no_errors	APOBR	HGNC	ENSG00000184730	tier1	-	-	46	0	0.00	33	7	17.50
LOC100131347	0	genome.wustl.edu	37	17	37213382	37213382	+	RNA	SNP	G	G	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	17	37213382	37213382	G	T	SNP	LOC100131347	ENST00000578423	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.986	-	-	-	no_errors	CTD-2206N4.4	Clone_based_vega_gene	ENSG00000263818	tier1	-	-	66	0	0.00	45	4	8.16
HIF1A	0	genome.wustl.edu	37	14	62199177	62199177	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	14	62199177	62199177	G	T	SNP	HIF1A	ENST00000539097	human	ensembl	74_37	+1	known	missense	c.887	p.G296V	1.000	pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,smart_PAS,pfscan_PAS,tigrfam_PAS	pfam_PAS_fold_3,pfam_HIF-1_TAD_C,pfam_HIF_alpha_subunit,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,prints_HIF-1_alpha,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	HIF1A	HGNC	ENSG00000100644	tier1	-	-	31	0	0.00	38	4	9.52
ODF3	0	genome.wustl.edu	37	11	197587	197587	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	11	197587	197587	C	A	SNP	ODF3	ENST00000325113	human	ensembl	74_37	+1	known	missense	c.136	p.L46M	0.569	NULL	pfam_SHIPPO-rpt	-	no_errors	ODF3	HGNC	ENSG00000177947	tier1	-	-	84	0	0.00	39	4	9.30
ZC3HAV1	0	genome.wustl.edu	37	7	138764595	138764595	+	Silent	SNP	G	G	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	7	138764595	138764595	G	T	SNP	ZC3HAV1	ENST00000242351	human	ensembl	74_37	-1	known	silent	c.1092	p.S364	0.001	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	ZC3HAV1	HGNC	ENSG00000105939	tier1	-	-	53	0	0.00	46	4	8.00
MYH9	0	genome.wustl.edu	37	22	36688042	36688042	+	Missense_Mutation	SNP	T	T	G			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	22	36688042	36688042	T	G	SNP	MYH9	ENST00000216181	human	ensembl	74_37	-1	known	missense	c.4334	p.K1445T	1.000	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Regulat_G_prot_signal_superfam,superfamily_Prefoldin,superfamily_Myosin_S1_N,superfamily_STAT_TF_coiled-coil,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH9	HGNC	ENSG00000100345	tier1	-	-	67	0	0.00	28	13	31.71
PTTG1IP	0	genome.wustl.edu	37	21	46276197	46276197	+	Silent	SNP	G	G	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	21	46276197	46276197	G	A	SNP	PTTG1IP	ENST00000330938	human	ensembl	74_37	-1	known	silent	c.360	p.C120	1.000	NULL	smart_Plexin-like_fold	-	no_errors	PTTG1IP	HGNC	ENSG00000183255	tier1	-	-	107	0	0.00	77	9	10.34
FAM208B	0	genome.wustl.edu	37	10	5788196	5788196	+	Missense_Mutation	SNP	T	T	C			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	10	5788196	5788196	T	C	SNP	FAM208B	ENST00000328090	human	ensembl	74_37	+1	known	missense	c.2812	p.S938P	0.962	pfam_DUF3715	pfam_DUF3715,pfam_DUF3699	-	no_errors	FAM208B	HGNC	ENSG00000108021	tier1	-	-	174	0	0.00	101	17	14.29
PSD2	0	genome.wustl.edu	37	5	139201548	139201548	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	5	139201548	139201548	C	A	SNP	PSD2	ENST00000274710	human	ensembl	74_37	+1	known	missense	c.1168	p.R390S	0.999	pfam_Sec7_dom,superfamily_Sec7_dom,smart_Sec7_dom,pfscan_Sec7_dom	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD2	HGNC	ENSG00000146005	tier1	-	-	38	0	0.00	33	4	10.81
BACE2	0	genome.wustl.edu	37	21	42647759	42647760	+	RNA	INS	-	-	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	21	42647759	42647760	-	A	INS	BACE2	ENST00000466122	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	BACE2	HGNC	ENSG00000182240	tier1			37	0	0.00	38	5	11.63
DRC1	0	genome.wustl.edu	37	2	26624902	26624902	+	Missense_Mutation	SNP	C	C	G			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	2	26624902	26624902	C	G	SNP	DRC1	ENST00000288710	human	ensembl	74_37	+1	known	missense	c.45	p.D15E	0.356	NULL	NULL	-	no_errors	DRC1	HGNC	ENSG00000157856	tier1	-	-	249	0	0.00	178	16	8.21
PRKCSH	0	genome.wustl.edu	37	19	11558341	11558346	+	In_Frame_Del	DEL	GAGGAG	GAGGAG	-			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	GAGGAG	GAGGAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	19	11558341	11558346	GAGGAG	-	DEL	PRKCSH	ENST00000252455	human	ensembl	74_37	+1	known	in_frame_del	c.937_942	p.EE316in_frame_del	0.997:0.999:0.994:1.000:1.000:0.720	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_LDrepeatLR_classA_rpt,pfscan_EF_hand_dom	-	no_errors	PRKCSH	HGNC	ENSG00000130175	tier1			NA	NA	NA	NA	NA	NA
THTPA	0	genome.wustl.edu	37	14	24026503	24026503	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	14	24026503	24026503	C	A	SNP	THTPA	ENST00000288014	human	ensembl	74_37	+1	known	missense	c.537	p.S179R	0.994	pfam_CYTH-like_domain,superfamily_CYTH-like_domain,pirsf_ThTPase	pfam_CYTH-like_domain,superfamily_CYTH-like_domain,pirsf_ThTPase	-	no_errors	THTPA	HGNC	ENSG00000259431	tier1	-	-	30	0	0.00	12	4	25.00
CACTIN	0	genome.wustl.edu	37	19	3624126	3624126	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	19	3624126	3624126	C	T	SNP	CACTIN	ENST00000248420	human	ensembl	74_37	-1	known	missense	c.202	p.G68R	0.001	NULL	pfam_Cactin_dom,pfam_Cactin_C	-	no_errors	CACTIN	HGNC	ENSG00000105298	tier1	-	-	58	0	0.00	47	5	9.62
DDX10	0	genome.wustl.edu	37	11	108788635	108788637	+	In_Frame_Del	DEL	TGA	TGA	-			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	TGA	TGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	11	108788635	108788637	TGA	-	DEL	DDX10	ENST00000322536	human	ensembl	74_37	+1	known	in_frame_del	c.2340_2342	p.D784in_frame_del	0.998:0.997:0.996	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX10	HGNC	ENSG00000178105	tier1			33	0	0.00	36	4	10.00
DCTN1	0	genome.wustl.edu	37	2	74597633	74597633	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	2	74597633	74597633	G	T	SNP	DCTN1	ENST00000361874	human	ensembl	74_37	-1	known	missense	c.1087	p.L363I	1.000	NULL	pfam_Dynactin,pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_Polyketide_synth_docking,superfamily_P-loop_NTPase,pfscan_CAP-Gly_domain	-	no_errors	DCTN1	HGNC	ENSG00000204843	tier1	-	-	57	0	0.00	41	4	8.89
RNF40	0	genome.wustl.edu	37	16	30785330	30785330	+	Silent	SNP	C	C	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	16	30785330	30785330	C	T	SNP	RNF40	ENST00000324685	human	ensembl	74_37	+1	known	silent	c.2901	p.F967	1.000	smart_Znf_RING,pfscan_Znf_RING	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF40	HGNC	ENSG00000103549	tier1	-	-	88	0	0.00	44	4	8.33
KMT2A	0	genome.wustl.edu	37	11	118376704	118376704	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	11	118376704	118376704	C	A	SNP	KMT2A	ENST00000389506	human	ensembl	74_37	+1	known	missense	c.10088	p.T3363N	0.540	pirsf_MeTrfase_trithorax	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	KMT2A	HGNC	ENSG00000118058	tier1	-	-	59	0	0.00	45	4	8.00
PLXNB1	0	genome.wustl.edu	37	3	48452412	48452412	+	Frame_Shift_Del	DEL	C	C	-			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	3	48452412	48452412	C	-	DEL	PLXNB1	ENST00000296440	human	ensembl	74_37	-1	known	frame_shift_del	c.5281	p.A1761fs	0.002	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB1	HGNC	ENSG00000164050	tier1			49	0	0.00	16	2	11.11
NCOR1	0	genome.wustl.edu	37	17	16049780	16049780	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	17	16049780	16049780	C	T	SNP	NCOR1	ENST00000268712	human	ensembl	74_37	-1	known	missense	c.992	p.R331K	1.000	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR1	HGNC	ENSG00000141027	tier1	-	-	86	0	0.00	51	8	13.56
DNM1P47	0	genome.wustl.edu	37	15	102300044	102300044	+	RNA	SNP	C	C	G			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	15	102300044	102300044	C	G	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660	tier1	-	-	49	0	0.00	27	3	10.00
LRRN2	0	genome.wustl.edu	37	1	204588925	204588925	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	1	204588925	204588925	C	T	SNP	LRRN2	ENST00000367175	human	ensembl	74_37	-1	known	missense	c.196	p.A66T	0.003	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRN2	HGNC	ENSG00000170382	tier1	-	-	51	0	0.00	25	4	13.79
ZNF407	0	genome.wustl.edu	37	18	72346148	72346148	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	18	72346148	72346148	G	A	SNP	ZNF407	ENST00000299687	human	ensembl	74_37	+1	known	missense	c.3173	p.R1058H	0.994	smart_Znf_C2H2-like,smart_Znf_U1	pfam_Znf_C2H2,smart_Znf_C2H2-like,smart_Znf_U1,pfscan_Znf_C2H2	-	no_errors	ZNF407	HGNC	ENSG00000215421	tier1	-	-	22	0	0.00	21	12	36.36
C2orf71	0	genome.wustl.edu	37	2	29295870	29295870	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	2	29295870	29295870	C	A	SNP	C2orf71	ENST00000331664	human	ensembl	74_37	-1	known	missense	c.1258	p.A420S	0.004	NULL	NULL	-	no_errors	C2orf71	HGNC	ENSG00000179270	tier1	-	-	81	0	0.00	44	14	23.73
MTMR2	0	genome.wustl.edu	37	11	95595500	95595500	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	11	95595500	95595500	G	T	SNP	MTMR2	ENST00000346299	human	ensembl	74_37	-1	known	missense	c.293	p.T98N	1.000	pfam_GRAM,smart_GRAM	pfam_Myotubularin-like_Pase_dom,pfam_GRAM,smart_GRAM,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTMR2	HGNC	ENSG00000087053	tier1	-	-	46	0	0.00	31	4	11.43
ARHGAP29	0	genome.wustl.edu	37	1	94643144	94643144	+	RNA	DEL	T	T	-			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	1	94643144	94643144	T	-	DEL	ARHGAP29	ENST00000482481	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARHGAP29	HGNC	ENSG00000137962	tier1			38	0	0.00	30	4	11.76
ENSG00000215933	0	genome.wustl.edu	37	X	71372202	71372209	+	RNA	DEL	CGCGCGCA	CGCGCGCA	-			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	CGCGCGCA	CGCGCGCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	X	71372202	71372209	CGCGCGCA	-	DEL	ENSG00000215933	ENST00000401114	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000:0.000:0.000:0.000:0.000:0.001:0.015:0.009	-	-	-	no_errors	BX119917.1	Clone_based_ensembl_gene	ENSG00000215933	tier1			NA	NA	NA	NA	NA	NA
OR2T8	0	genome.wustl.edu	37	1	248084909	248084909	+	Missense_Mutation	SNP	T	T	G			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	1	248084909	248084909	T	G	SNP	OR2T8	ENST00000319968	human	ensembl	74_37	+1	known	missense	c.590	p.M197R	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T8	HGNC	ENSG00000177462	tier1	rs34508376	-	32	0	0.00	13	3	18.75
ATXN1	0	genome.wustl.edu	37	6	16753377	16753378	+	RNA	INS	-	-	G			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	6	16753377	16753378	-	G	INS	ATXN1	ENST00000479680	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ATXN1	HGNC	ENSG00000124788	tier1			38	0	0.00	35	4	10.26
SLC22A8	0	genome.wustl.edu	37	11	62782355	62782355	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	11	62782355	62782355	G	A	SNP	SLC22A8	ENST00000336232	human	ensembl	74_37	-1	known	missense	c.76	p.L26F	0.008	tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A8	HGNC	ENSG00000149452	tier1	-	-	80	0	0.00	54	10	15.38
ST18	0	genome.wustl.edu	37	8	53084453	53084453	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	8	53084453	53084453	G	A	SNP	ST18	ENST00000276480	human	ensembl	74_37	-1	known	missense	c.968	p.T323I	1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	ST18	HGNC	ENSG00000147488	tier1	-	-	95	0	0.00	47	5	9.62
BPTF	0	genome.wustl.edu	37	17	65955782	65955783	+	In_Frame_Ins	INS	-	-	GCC			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	17	65955782	65955783	-	GCC	INS	BPTF	ENST00000321892	human	ensembl	74_37	+1	known	in_frame_ins	c.8430_8431	p.2810in_frame_insA	0.069:0.577	superfamily_Bromodomain	pfam_Bromodomain,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BPTF	HGNC	ENSG00000171634	tier1			42	0	0.00	51	5	8.93
TIGD6	0	genome.wustl.edu	37	5	149375002	149375002	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	5	149375002	149375002	G	A	SNP	TIGD6	ENST00000296736	human	ensembl	74_37	-1	known	missense	c.910	p.P304S	0.998	pfam_DDE_SF_endonuclease_CENPB-like	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD6	HGNC	ENSG00000164296	tier1	-	-	59	0	0.00	46	4	8.00
SYMPK	0	genome.wustl.edu	37	19	46328479	46328479	+	Nonsense_Mutation	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	19	46328479	46328479	C	A	SNP	SYMPK	ENST00000245934	human	ensembl	74_37	-1	known	nonsense	c.2440	p.E814*	1.000	superfamily_ARM-type_fold	pfam_DUF3453,pfam_Symplekin_C,superfamily_ARM-type_fold	-	no_errors	SYMPK	HGNC	ENSG00000125755	tier1	-	-	69	0	0.00	32	4	11.11
LRP8	0	genome.wustl.edu	37	1	53792620	53792620	+	Nonsense_Mutation	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	1	53792620	53792620	C	A	SNP	LRP8	ENST00000306052	human	ensembl	74_37	-1	known	nonsense	c.169	p.E57*	0.996	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP8	HGNC	ENSG00000157193	tier1	-	-	79	0	0.00	40	5	11.11
DCAF5	0	genome.wustl.edu	37	14	69521851	69521851	+	Missense_Mutation	SNP	G	G	C			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	14	69521851	69521851	G	C	SNP	DCAF5	ENST00000341516	human	ensembl	74_37	-1	known	missense	c.1552	p.R518G	0.999	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF5	HGNC	ENSG00000139990	tier1	-	-	38	0	0.00	31	4	11.43
LCN2	0	genome.wustl.edu	37	9	130913979	130913979	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	9	130913979	130913979	C	T	SNP	LCN2	ENST00000372998	human	ensembl	74_37	+1	known	missense	c.344	p.T115M	0.000	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_N_gelatinase	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_N_gelatinase,prints_PstgldnD_synth,prints_Lipocalin,prints_A1-microglobln	-	no_errors	LCN2	HGNC	ENSG00000148346	tier1	rs150975968	GMAF=0.0005	119	0	0.00	41	9	18.00
PCM1	0	genome.wustl.edu	37	8	17810512	17810512	+	Nonsense_Mutation	SNP	G	G	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	8	17810512	17810512	G	T	SNP	PCM1	ENST00000325083	human	ensembl	74_37	+1	known	nonsense	c.1105	p.E369*	1.000	NULL	NULL	-	no_errors	PCM1	HGNC	ENSG00000078674	tier1	-	-	55	0	0.00	57	5	8.06
LOC100131825	0	genome.wustl.edu	37	1	159166613	159166613	+	RNA	DEL	T	T	-			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	1	159166613	159166613	T	-	DEL	LOC100131825	ENST00000415675	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTA-134P22.2	Clone_based_vega_gene	ENSG00000225670	tier1			18	0	0.00	11	3	21.43
NLRP12	0	genome.wustl.edu	37	19	54313886	54313886	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	19	54313886	54313886	G	A	SNP	NLRP12	ENST00000324134	human	ensembl	74_37	-1	known	missense	c.1027	p.R343W	0.375	superfamily_P-loop_NTPase,pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP12	HGNC	ENSG00000142405	tier1	rs112159191	-	46	0	0.00	19	7	26.92
LONRF2	0	genome.wustl.edu	37	2	100915748	100915748	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	2	100915748	100915748	G	A	SNP	LONRF2	ENST00000393437	human	ensembl	74_37	-1	known	missense	c.1301	p.T434I	0.000	NULL	pfam_Pept_S16_N,pfam_Znf_C3HC4_RING-type,superfamily_PUA-like_domain,smart_Znf_RING,smart_TPR_repeat,smart_Pept_S16_N,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	LONRF2	HGNC	ENSG00000170500	tier1	-	-	71	0	0.00	63	14	17.95
ATIC	0	genome.wustl.edu	37	2	216197214	216197214	+	Silent	SNP	A	A	G			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	2	216197214	216197214	A	G	SNP	ATIC	ENST00000236959	human	ensembl	74_37	+1	known	silent	c.798	p.K266	0.985	pfam_AICARFT_IMPCHas,superfamily_Cytidine_deaminase-like,smart_AICARFT_IMPCHas,pirsf_AICARFT_IMPCHas,tigrfam_AICARFT_IMPCHas	pfam_AICARFT_IMPCHas,pfam_MGS-like_dom,superfamily_Cytidine_deaminase-like,superfamily_MGS-like_dom,smart_MGS-like_dom,smart_AICARFT_IMPCHas,pirsf_AICARFT_IMPCHas,tigrfam_AICARFT_IMPCHas	-	no_errors	ATIC	HGNC	ENSG00000138363	tier1	-	-	56	0	0.00	60	7	10.45
KRTAP2-2	0	genome.wustl.edu	37	17	39211139	39211140	+	In_Frame_Ins	INS	-	-	GCAGGGGGGCCGGCA			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	17	39211139	39211140	-	GCAGGGGGGCCGGCA	INS	KRTAP2-2	ENST00000542910	human	ensembl	74_37	-1	known	in_frame_ins	c.325_324	p.108in_frame_insCRPPC	1.000:1.000	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP2-2	HGNC	ENSG00000214518	tier1			NA	NA	NA	NA	NA	NA
CXXC1	0	genome.wustl.edu	37	18	47810148	47810148	+	Missense_Mutation	SNP	A	A	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	18	47810148	47810148	A	T	SNP	CXXC1	ENST00000412036	human	ensembl	74_37	-1	known	missense	c.1463	p.I488N	1.000	pfam_CpG-bd_C	pfam_CpG-bd_C,pfam_Znf_CXXC,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	CXXC1	HGNC	ENSG00000154832	tier1	-	-	60	0	0.00	34	6	15.00
SIN3A	0	genome.wustl.edu	37	15	75684814	75684814	+	Missense_Mutation	SNP	G	G	C			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	15	75684814	75684814	G	C	SNP	SIN3A	ENST00000360439	human	ensembl	74_37	-1	known	missense	c.2620	p.Q874E	1.000	NULL	pfam_PAH,pfam_HDAC_interact,superfamily_PAH,smart_HDAC_interact	-	no_errors	SIN3A	HGNC	ENSG00000169375	tier1	-	-	56	0	0.00	57	21	26.92
ARL6	0	genome.wustl.edu	37	3	97487021	97487021	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	3	97487021	97487021	G	A	SNP	ARL6	ENST00000335979	human	ensembl	74_37	+1	known	missense	c.70	p.G24R	1.000	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,pfam_Gtr1_RagA,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,prints_Small_GTPase_ARF/SAR,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,pfam_Gprotein_alpha_su,pfam_Gtr1_RagA,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,prints_Small_GTPase_ARF/SAR,tigrfam_Small_GTP-bd_dom	-	no_errors	ARL6	HGNC	ENSG00000113966	tier1	-	-	89	0	0.00	51	7	12.07
GOLGA3	0	genome.wustl.edu	37	12	133349865	133349865	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	12	133349865	133349865	G	T	SNP	GOLGA3	ENST00000204726	human	ensembl	74_37	-1	known	missense	c.4323	p.S1441R	1.000	NULL	superfamily_Prefoldin	-	no_errors	GOLGA3	HGNC	ENSG00000090615	tier1	-	-	50	0	0.00	35	4	10.26
CHIT1	0	genome.wustl.edu	37	1	203186975	203186975	+	Nonsense_Mutation	SNP	T	T	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	1	203186975	203186975	T	A	SNP	CHIT1	ENST00000367229	human	ensembl	74_37	-1	known	nonsense	c.1048	p.K350*	0.332	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	pfam_Glyco_hydro18cat,pfam_Chitin-bd_dom,superfamily_Glycoside_hydrolase_SF,superfamily_Chitin-bd_dom,smart_Chitinase_II,smart_Chitin-bd_dom,pfscan_Chitin-bd_dom	-	no_errors	CHIT1	HGNC	ENSG00000133063	tier1	-	-	75	0	0.00	48	5	9.43
UBL4A	0	genome.wustl.edu	37	X	153713811	153713811	+	RNA	SNP	G	G	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	X	153713811	153713811	G	T	SNP	UBL4A	ENST00000477777	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.274	-	-	-	no_errors	UBL4A	HGNC	ENSG00000102178	tier1	-	-	51	0	0.00	36	4	10.00
MT-RNR1	0	genome.wustl.edu	37	MT	965	965	+	RNA	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	MT	965	965	C	A	SNP	MT-RNR1	ENST00000389680	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR1	HGNC	ENSG00000211459	tier1	-	-	59	0	0.00	18	2	10.00
TFEC	0	genome.wustl.edu	37	7	115750938	115750938	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	7	115750938	115750938	G	A	SNP	TFEC	ENST00000484212	human	ensembl	74_37	-1	novel	missense	c.22	p.L8F	0.373	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TFEC	HGNC	ENSG00000105967	tier1	-	-	50	0	0.00	59	6	9.23
SASS6	0	genome.wustl.edu	37	1	100550855	100550855	+	RNA	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	1	100550855	100550855	C	A	SNP	SASS6	ENST00000462159	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SASS6	HGNC	ENSG00000156876	tier1	-	-	41	0	0.00	37	4	9.76
TKT	0	genome.wustl.edu	37	3	53274298	53274298	+	Missense_Mutation	SNP	C	C	G			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	3	53274298	53274298	C	G	SNP	TKT	ENST00000423525	human	ensembl	74_37	-1	known	missense	c.406	p.A136P	1.000	pfam_Transketolase_N,pfam_DH_E1	pfam_Transketolase_N,pfam_Transketolase-like_Pyr-bd,pfam_Transketolase_C,pfam_DH_E1,superfamily_Transketo_C/Pyr-ferredox_oxred,smart_Transketolase-like_Pyr-bd	-	no_errors	TKT	HGNC	ENSG00000163931	tier1	-	-	119	0	0.00	66	16	19.51
RYR3	0	genome.wustl.edu	37	15	33954925	33954925	+	Silent	SNP	C	C	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	15	33954925	33954925	C	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	silent	c.5194	p.L1732	0.543	NULL	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	98	0	0.00	52	21	28.77
KRTAP10-2	0	genome.wustl.edu	37	21	45971380	45971381	+	RNA	INS	-	-	GTGAGTGAGTGT			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	21	45971380	45971381	-	GTGAGTGAGTGT	INS	KRTAP10-2	ENST00000498210	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.018:0.138	-	-	-	no_errors	KRTAP10-2	HGNC	ENSG00000205445	tier1			NA	NA	NA	NA	NA	NA
CETP	0	genome.wustl.edu	37	16	56996959	56996959	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	16	56996959	56996959	C	A	SNP	CETP	ENST00000200676	human	ensembl	74_37	+1	known	missense	c.156	p.F52L	0.997	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,pirsf_Cholesteryl_ester_transfer	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C,pirsf_Cholesteryl_ester_transfer	-	no_errors	CETP	HGNC	ENSG00000087237	tier1	-	-	68	0	0.00	44	4	8.33
QKI	0	genome.wustl.edu	37	6	163984490	163984490	+	Missense_Mutation	SNP	G	G	C			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	6	163984490	163984490	G	C	SNP	QKI	ENST00000361752	human	ensembl	74_37	+1	known	missense	c.673	p.A225P	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom	-	no_errors	QKI	HGNC	ENSG00000112531	tier1	-	-	29	0	0.00	34	10	22.73
NDFIP1	0	genome.wustl.edu	37	5	141511526	141511526	+	RNA	DEL	A	A	-			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	5	141511526	141511526	A	-	DEL	NDFIP1	ENST00000509436	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NDFIP1	HGNC	ENSG00000131507	tier1			14	0	0.00	14	4	22.22
PLG	0	genome.wustl.edu	37	6	161134305	161134306	+	RNA	INS	-	-	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	6	161134305	161134306	-	T	INS	PLG	ENST00000462918	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.003	-	-	-	no_errors	PLG	HGNC	ENSG00000122194	tier1			14	0	0.00	10	6	37.50
FLJ20444	0	genome.wustl.edu	37	9	66513647	66513647	+	RNA	SNP	C	C	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	9	66513647	66513647	C	T	SNP	FLJ20444	ENST00000586625	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-262H14.3	Clone_based_vega_gene	ENSG00000234665	tier1	-	-	33	0	0.00	30	4	11.76
NF1	0	genome.wustl.edu	37	17	29541587	29541588	+	Frame_Shift_Ins	INS	-	-	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	17	29541587	29541588	-	A	INS	NF1	ENST00000358273	human	ensembl	74_37	+1	known	frame_shift_ins	c.1511_1512	p.L506fs	1.000:0.999	superfamily_ARM-type_fold	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712	tier1			156	0	0.00	175	40	18.60
EFCAB11	0	genome.wustl.edu	37	14	90420965	90420965	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	14	90420965	90420965	C	T	SNP	EFCAB11	ENST00000316738	human	ensembl	74_37	-1	known	missense	c.40	p.E14K	0.658	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	EFCAB11	HGNC	ENSG00000140025	tier1	-	-	267	1	0.37	150	32	17.49
ZNF608	0	genome.wustl.edu	37	5	124080775	124080776	+	RNA	INS	-	-	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	5	124080775	124080776	-	A	INS	ZNF608	ENST00000512940	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.885:0.996	-	-	-	no_errors	ZNF608	HGNC	ENSG00000168916	tier1			35	0	0.00	14	3	17.65
MYO15B	0	genome.wustl.edu	37	17	73620950	73620950	+	RNA	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	17	73620950	73620950	C	A	SNP	MYO15B	ENST00000577948	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.025	-	-	-	no_errors	MYO15B	HGNC	ENSG00000266714	tier1	-	-	37	0	0.00	40	4	9.09
ENKD1	0	genome.wustl.edu	37	16	67697350	67697350	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	16	67697350	67697350	G	T	SNP	ENKD1	ENST00000243878	human	ensembl	74_37	-1	known	missense	c.853	p.L285M	1.000	NULL	NULL	-	no_errors	ENKD1	HGNC	ENSG00000124074	tier1	-	-	38	0	0.00	30	4	11.76
JMJD1C	0	genome.wustl.edu	37	10	64974302	64974302	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	10	64974302	64974302	C	A	SNP	JMJD1C	ENST00000399262	human	ensembl	74_37	-1	known	missense	c.1625	p.S542I	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD1C	HGNC	ENSG00000171988	tier1	-	-	52	0	0.00	36	4	10.00
CERS2	0	genome.wustl.edu	37	1	150940932	150940932	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	1	150940932	150940932	C	T	SNP	CERS2	ENST00000271688	human	ensembl	74_37	-1	known	missense	c.230	p.R77Q	1.000	superfamily_Homeodomain-like,pirsf_Longevity_assurance_LAG1_LAC1,pfscan_Homeobox_dom	pfam_TLC-dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_TLC-dom,pirsf_Longevity_assurance_LAG1_LAC1,pfscan_TLC-dom,pfscan_Homeobox_dom	-	no_errors	CERS2	HGNC	ENSG00000143418	tier1	-	-	133	0	0.00	94	15	13.76
ZMYM3	0	genome.wustl.edu	37	X	70465194	70465194	+	Frame_Shift_Del	DEL	G	G	-			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	X	70465194	70465194	G	-	DEL	ZMYM3	ENST00000373988	human	ensembl	74_37	-1	known	frame_shift_del	c.3008	p.P1003fs	1.000	NULL	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH_dom	-	no_errors	ZMYM3	HGNC	ENSG00000147130	tier1			33	0	0.00	10	2	16.67
KIF1C	0	genome.wustl.edu	37	17	4925906	4925906	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	17	4925906	4925906	C	A	SNP	KIF1C	ENST00000320785	human	ensembl	74_37	+1	known	missense	c.2530	p.L844M	1.000	NULL	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1C	HGNC	ENSG00000129250	tier1	-	-	45	0	0.00	24	4	14.29
WWC2	0	genome.wustl.edu	37	4	184202086	184202086	+	Missense_Mutation	SNP	A	A	G			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	4	184202086	184202086	A	G	SNP	WWC2	ENST00000448232	human	ensembl	74_37	+1	known	missense	c.2720	p.K907R	0.000	NULL	pfam_WW_dom,superfamily_C2_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WWC2	HGNC	ENSG00000151718	tier1	-	-	42	0	0.00	34	16	32.00
ZNF133	0	genome.wustl.edu	37	20	18296306	18296306	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	20	18296306	18296306	G	A	SNP	ZNF133	ENST00000396026	human	ensembl	74_37	+1	known	missense	c.820	p.V274M	0.891	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF133	HGNC	ENSG00000125846	tier1	-	-	58	0	0.00	50	17	25.37
FBXO41	0	genome.wustl.edu	37	2	73486154	73486154	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	2	73486154	73486154	C	T	SNP	FBXO41	ENST00000295133	human	ensembl	74_37	-1	known	missense	c.2767	p.G923S	1.000	NULL	superfamily_F-box_dom	-	no_errors	FBXO41	HGNC	ENSG00000163013	tier1	-	-	92	0	0.00	57	7	10.94
GAB3	0	genome.wustl.edu	37	X	153924353	153924353	+	RNA	SNP	G	G	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	X	153924353	153924353	G	T	SNP	GAB3	ENST00000475685	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.996	-	-	-	no_errors	GAB3	HGNC	ENSG00000160219	tier1	-	-	34	0	0.00	29	4	12.12
LOC101928787	0	genome.wustl.edu	37	17	18857121	18857121	+	RNA	SNP	G	G	C			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	17	18857121	18857121	G	C	SNP	LOC101928787	ENST00000354432	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	AC090286.4	Clone_based_vega_gene	ENSG00000196893	tier1	-	-	78	0	0.00	52	11	17.46
ARID1A	0	genome.wustl.edu	37	1	27100182	27100184	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	1	27100182	27100184	GCA	-	DEL	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	in_frame_del	c.3978_3980	p.Q1330in_frame_del	0.986:0.981:0.931	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713	tier1			50	0	0.00	39	5	11.36
PLXNB1	0	genome.wustl.edu	37	3	48451087	48451087	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	3	48451087	48451087	C	A	SNP	PLXNB1	ENST00000296440	human	ensembl	74_37	-1	known	missense	c.5831	p.S1944I	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB1	HGNC	ENSG00000164050	tier1	-	-	60	0	0.00	46	4	8.00
FAT1	0	genome.wustl.edu	37	4	187540522	187540522	+	Silent	SNP	C	C	T			TCGA-SI-A71P-01A-12D-A33E-09	TCGA-SI-A71P-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	666434c3-057c-46d5-875f-5243314915c1	a4b6f436-9bf6-4964-a64b-b792e75e0697	4	187540522	187540522	C	T	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	silent	c.7218	p.G2406	0.998	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857	tier1	-	-	47	0	0.00	34	4	10.53
