Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
F8	0	genome.wustl.edu	37	X	154124375	154124375	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	X	154124375	154124375	C	T	SNP	F8	ENST00000360256	human	ensembl	74_37	-1	known	missense	c.6406	p.G2136R	1.000	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010	tier1	-	-	101	0	0.00	104	20	16.13
TAF1	0	genome.wustl.edu	37	X	70598812	70598812	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	X	70598812	70598812	C	T	SNP	TAF1	ENST00000449580	human	ensembl	74_37	+1	known	missense	c.1288	p.R430C	1.000	pirsf_TAF1_animal	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1	HGNC	ENSG00000147133	tier1	-	-	60	0	0.00	52	27	34.18
C15orf52	0	genome.wustl.edu	37	15	40630782	40630782	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	15	40630782	40630782	C	T	SNP	C15orf52	ENST00000559313	human	ensembl	74_37	-1	known	missense	c.599	p.R200Q	0.000	NULL	NULL	-	no_errors	C15orf52	HGNC	ENSG00000188549	tier1	-	-	87	0	0.00	94	42	30.88
CDKL5	0	genome.wustl.edu	37	X	18622326	18622326	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	X	18622326	18622326	G	T	SNP	CDKL5	ENST00000379989	human	ensembl	74_37	+1	known	missense	c.1282	p.G428C	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDKL5	HGNC	ENSG00000008086	tier1	-	-	56	0	0.00	42	4	8.70
BAP1	0	genome.wustl.edu	37	3	52438591	52438591	+	Silent	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	3	52438591	52438591	G	A	SNP	BAP1	ENST00000460680	human	ensembl	74_37	-1	known	silent	c.1128	p.D376	1.000	NULL	pfam_Peptidase_C12,prints_Peptidase_C12	-	no_errors	BAP1	HGNC	ENSG00000163930	tier1	-	-	52	0	0.00	51	16	23.88
WHSC1	0	genome.wustl.edu	37	4	1918632	1918632	+	Silent	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	4	1918632	1918632	G	A	SNP	WHSC1	ENST00000382891	human	ensembl	74_37	+1	known	silent	c.795	p.Q265	1.000	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,pfam_HMG_box_dom,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_PWWP_dom,smart_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_HMG_box_dom	-	no_errors	WHSC1	HGNC	ENSG00000109685	tier1	-	-	80	0	0.00	50	62	55.36
TTC17	0	genome.wustl.edu	37	11	43418289	43418289	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	11	43418289	43418289	G	T	SNP	TTC17	ENST00000039989	human	ensembl	74_37	+1	known	missense	c.694	p.A232S	1.000	NULL	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC17	HGNC	ENSG00000052841	tier1	-	-	41	0	0.00	30	4	11.76
LOC101927345	0	genome.wustl.edu	37	1	143391795	143391795	+	RNA	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	1	143391795	143391795	G	A	SNP	LOC101927345	ENST00000412492	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.855	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261	tier1	-	-	392	0	0.00	303	75	19.84
EPS8	0	genome.wustl.edu	37	12	15776223	15776224	+	Splice_Site	INS	-	-	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	12	15776223	15776224	-	A	INS	EPS8	ENST00000281172	human	ensembl	74_37	-1	known	splice_site_ins	c.2226-3_2226-2	e19-2	1.000:0.000	-	-	-	no_errors	EPS8	HGNC	ENSG00000151491	tier1			51	0	0.00	58	6	9.38
CDK5RAP3	0	genome.wustl.edu	37	17	46053334	46053334	+	Silent	SNP	A	A	G			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	17	46053334	46053334	A	G	SNP	CDK5RAP3	ENST00000338399	human	ensembl	74_37	+1	known	silent	c.753	p.E251	1.000	pfam_DUF773	pfam_DUF773	-	no_errors	CDK5RAP3	HGNC	ENSG00000108465	tier1	rs202125432	-	58	0	0.00	86	17	16.50
RAD21L1	0	genome.wustl.edu	37	20	1221006	1221006	+	Nonsense_Mutation	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	20	1221006	1221006	G	T	SNP	RAD21L1	ENST00000409241	human	ensembl	74_37	+1	known	nonsense	c.784	p.E262*	0.340	NULL	pfam_Rad21_Rec8_N,pfam_Rad21/Rec8_C_eu	-	no_errors	RAD21L1	HGNC	ENSG00000244588	tier1	-	-	82	0	0.00	36	4	10.00
OR52M1	0	genome.wustl.edu	37	11	4566606	4566606	+	Nonsense_Mutation	SNP	C	C	G			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	11	4566606	4566606	C	G	SNP	OR52M1	ENST00000360213	human	ensembl	74_37	+1	known	nonsense	c.186	p.Y62*	0.685	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52M1	HGNC	ENSG00000197790	tier1	-	-	66	0	0.00	91	20	18.02
OLFM3	0	genome.wustl.edu	37	1	102269549	102269549	+	RNA	DEL	T	T	-			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	1	102269549	102269549	T	-	DEL	OLFM3	ENST00000462354	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.475	-	-	-	no_errors	OLFM3	HGNC	ENSG00000118733	tier1			24	0	0.00	30	4	11.76
TRIM9	0	genome.wustl.edu	37	14	51452697	51452697	+	Missense_Mutation	SNP	G	G	C			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	14	51452697	51452697	G	C	SNP	TRIM9	ENST00000338969	human	ensembl	74_37	-1	known	missense	c.1757	p.S586C	1.000	superfamily_ConA-like_lec_gl_sf	pfam_SPRY_rcpt,pfam_Fibronectin_type3,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM9	HGNC	ENSG00000100505	tier1	-	-	69	0	0.00	51	17	25.00
CACNA1A	0	genome.wustl.edu	37	19	13410062	13410062	+	Silent	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	19	13410062	13410062	G	A	SNP	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	silent	c.2385	p.N795	0.916	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837	tier1	-	-	117	0	0.00	92	70	43.21
PSMF1	0	genome.wustl.edu	37	20	1115769	1115769	+	Missense_Mutation	SNP	A	A	G			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	20	1115769	1115769	A	G	SNP	PSMF1	ENST00000333082	human	ensembl	74_37	+1	known	missense	c.371	p.Y124C	1.000	pfam_FP_dom	pfam_FP_dom,pfam_PI31_Prot_Reg	-	no_errors	PSMF1	HGNC	ENSG00000125818	tier1	-	-	68	0	0.00	17	24	58.54
PIWIL2	0	genome.wustl.edu	37	8	22138936	22138936	+	Silent	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	8	22138936	22138936	G	A	SNP	PIWIL2	ENST00000356766	human	ensembl	74_37	+1	known	silent	c.333	p.K111	0.984	NULL	pfam_Piwi,pfam_PAZ_dom,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	PIWIL2	HGNC	ENSG00000197181	tier1	-	-	65	0	0.00	78	18	18.75
F7	0	genome.wustl.edu	37	13	113765058	113765058	+	Missense_Mutation	SNP	A	A	G			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	13	113765058	113765058	A	G	SNP	F7	ENST00000375581	human	ensembl	74_37	+1	known	missense	c.185	p.N62S	1.000	pirsf_Pept_S1A_FX,superfamily_GLA_domain,smart_GLA_domain,pfscan_GLA_domain	pirsf_Pept_S1A_FX,pfam_Peptidase_S1,pfam_GLA_domain,pfam_Peptidase_S1A_nudel,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Peptidase_S1,prints_Peptidase_S1A,prints_GLA_domain,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Peptidase_S1	-	no_errors	F7	HGNC	ENSG00000057593	tier1	-	-	142	0	0.00	277	29	9.48
TEKT4P2	0	genome.wustl.edu	37	21	9908223	9908223	+	RNA	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	21	9908223	9908223	G	A	SNP	TEKT4P2	ENST00000416067	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TEKT4P2	HGNC	ENSG00000188681	tier1	-	-	62	0	0.00	8	2	20.00
OR2T1	0	genome.wustl.edu	37	1	248569970	248569970	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	1	248569970	248569970	C	A	SNP	OR2T1	ENST00000366474	human	ensembl	74_37	+1	known	missense	c.675	p.N225K	0.054	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T1	HGNC	ENSG00000175143	tier1	-	-	44	0	0.00	5	37	88.10
ADAP2	0	genome.wustl.edu	37	17	29233372	29233372	+	RNA	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	17	29233372	29233372	G	T	SNP	ADAP2	ENST00000583688	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	ADAP2	HGNC	ENSG00000184060	tier1	-	-	14	0	0.00	4	8	66.67
UHRF1	0	genome.wustl.edu	37	19	4962077	4962078	+	RNA	INS	-	-	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	19	4962077	4962078	-	A	INS	UHRF1	ENST00000262952	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.066:0.089	-	-	-	no_errors	UHRF1	HGNC	ENSG00000034063	tier1			8	0	0.00	5	4	44.44
TMEM8C	0	genome.wustl.edu	37	9	136384035	136384035	+	Silent	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	9	136384035	136384035	G	A	SNP	TMEM8C	ENST00000339996	human	ensembl	74_37	-1	known	silent	c.360	p.G120	0.983	pfam_DUF3522	pfam_DUF3522	-	no_errors	TMEM8C	HGNC	ENSG00000187616	tier1	-	-	60	0	0.00	44	21	32.31
RNFT2	0	genome.wustl.edu	37	12	117289548	117289549	+	Frame_Shift_Ins	INS	-	-	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	12	117289548	117289549	-	A	INS	RNFT2	ENST00000319176	human	ensembl	74_37	+1	putative	frame_shift_ins	c.765_766	p.K259fs	0.004:0.003	NULL	NULL	-	no_errors	RNFT2	HGNC	ENSG00000135119	tier1			30	0	0.00	25	5	16.67
ZP4	0	genome.wustl.edu	37	1	238053862	238053862	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	1	238053862	238053862	G	T	SNP	ZP4	ENST00000366570	human	ensembl	74_37	-1	known	missense	c.74	p.A25E	0.000	NULL	pfam_ZP_dom,pfam_P_trefoil,superfamily_P_trefoil,smart_P_trefoil,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	ZP4	HGNC	ENSG00000116996	tier1	-	-	34	0	0.00	28	4	12.50
SATB1	0	genome.wustl.edu	37	3	18391133	18391135	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	3	18391133	18391135	CTG	-	DEL	SATB1	ENST00000417717	human	ensembl	74_37	-1	known	in_frame_del	c.1917_1915	p.Q639in_frame_del	0.002:0.133:0.926	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	SATB1	HGNC	ENSG00000182568	tier1			42	0	0.00	44	5	10.20
OPRK1	0	genome.wustl.edu	37	8	54163589	54163589	+	Silent	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	8	54163589	54163589	G	A	SNP	OPRK1	ENST00000265572	human	ensembl	74_37	-1	known	silent	c.9	p.S3	0.999	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_Kappa_opi_rcpt,prints_GPCR_Rhodpsn,prints_Opioid_rcpt,prints_Neuropept_B/W_rcpt,prints_Somatstn_rcpt,prints_NPY_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OPRK1	HGNC	ENSG00000082556	tier1	-	-	29	0	0.00	25	25	48.08
SNX14	0	genome.wustl.edu	37	6	86215589	86215589	+	RNA	SNP	A	A	G			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	6	86215589	86215589	A	G	SNP	SNX14	ENST00000508980	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNX14	HGNC	ENSG00000135317	tier1	-	-	24	0	0.00	14	4	22.22
CAPN7	0	genome.wustl.edu	37	3	15253704	15253704	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	3	15253704	15253704	G	A	SNP	CAPN7	ENST00000253693	human	ensembl	74_37	+1	known	missense	c.196	p.A66T	1.000	pfam_MIT,smart_MIT	pfam_Peptidase_C2_calpain_cat,pfam_MIT,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_MIT,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,prints_Calpain_cysteine_protease,pfscan_Peptidase_C2_calpain_cat	-	no_errors	CAPN7	HGNC	ENSG00000131375	tier1	-	-	65	0	0.00	42	29	40.85
PABPC3	0	genome.wustl.edu	37	13	25671027	25671027	+	Missense_Mutation	SNP	A	A	G			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	13	25671027	25671027	A	G	SNP	PABPC3	ENST00000281589	human	ensembl	74_37	+1	known	missense	c.691	p.K231E	0.999	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,pfam_PABP_HYD,superfamily_PABP_HYD,smart_RRM_dom,smart_RRM_dom_euk,smart_PABP_HYD,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC3	HGNC	ENSG00000151846	tier1	rs78826513	-	73	0	0.00	73	7	8.75
SLAIN2	0	genome.wustl.edu	37	4	48380035	48380035	+	Nonsense_Mutation	SNP	C	C	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	4	48380035	48380035	C	T	SNP	SLAIN2	ENST00000264313	human	ensembl	74_37	+1	known	nonsense	c.661	p.R221*	1.000	NULL	NULL	-	no_errors	SLAIN2	HGNC	ENSG00000109171	tier1	-	-	68	0	0.00	61	7	10.29
SCAND3	0	genome.wustl.edu	37	6	28540109	28540109	+	Nonsense_Mutation	SNP	A	A	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	6	28540109	28540109	A	T	SNP	SCAND3	ENST00000452236	human	ensembl	74_37	-1	known	nonsense	c.3557	p.L1186*	0.992	superfamily_RNaseH-like_dom	pfam_Tscrpt_reg_SCAN,pfam_Integrase_cat-core,pfam_HATC_dom_C,superfamily_Retrov_capsid_C,superfamily_RNaseH-like_dom,smart_Tscrpt_reg_SCAN,pfscan_Integrase_cat-core,pfscan_Tscrpt_reg_SCAN	-	no_errors	SCAND3	HGNC	ENSG00000232040	tier1	-	-	91	0	0.00	53	23	30.26
POF1B	0	genome.wustl.edu	37	X	84614563	84614563	+	Missense_Mutation	SNP	G	G	C			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	X	84614563	84614563	G	C	SNP	POF1B	ENST00000373145	human	ensembl	74_37	-1	known	missense	c.430	p.P144A	1.000	NULL	NULL	-	no_errors	POF1B	HGNC	ENSG00000124429	tier1	-	-	84	0	0.00	51	52	50.49
CTPS2	0	genome.wustl.edu	37	X	16609019	16609020	+	RNA	INS	-	-	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	X	16609019	16609020	-	A	INS	CTPS2	ENST00000483053	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CTPS2	HGNC	ENSG00000047230	tier1			41	0	0.00	28	6	17.65
GBF1	0	genome.wustl.edu	37	10	104117849	104117849	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	10	104117849	104117849	G	T	SNP	GBF1	ENST00000369983	human	ensembl	74_37	+1	known	missense	c.693	p.K231N	1.000	superfamily_ARM-type_fold	pfam_Sec7_dom,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	GBF1	HGNC	ENSG00000107862	tier1	-	-	72	0	0.00	28	4	12.50
TXNDC16	0	genome.wustl.edu	37	14	52907417	52907417	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	14	52907417	52907417	G	T	SNP	TXNDC16	ENST00000281741	human	ensembl	74_37	-1	known	missense	c.1868	p.P623H	0.996	NULL	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC16	HGNC	ENSG00000087301	tier1	-	-	47	0	0.00	38	4	9.52
ZDHHC13	0	genome.wustl.edu	37	11	19138776	19138776	+	RNA	SNP	C	C	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	11	19138776	19138776	C	T	SNP	ZDHHC13	ENST00000524744	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.003	-	-	-	no_errors	ZDHHC13	HGNC	ENSG00000177054	tier1	-	-	41	0	0.00	33	4	10.81
TAOK1	0	genome.wustl.edu	37	17	27822611	27822611	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	17	27822611	27822611	G	A	SNP	TAOK1	ENST00000261716	human	ensembl	74_37	+1	known	missense	c.865	p.V289M	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Homeodomain-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TAOK1	HGNC	ENSG00000160551	tier1	-	-	81	0	0.00	59	19	24.36
ETV1	0	genome.wustl.edu	37	7	13971306	13971306	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	7	13971306	13971306	C	A	SNP	ETV1	ENST00000405218	human	ensembl	74_37	-1	known	missense	c.623	p.R208L	1.000	pfam_ETS_PEA3_N	pfam_ETS_PEA3_N,pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ETV1	HGNC	ENSG00000006468	tier1	-	-	90	0	0.00	183	42	18.58
KRT1	0	genome.wustl.edu	37	12	53069223	53069243	+	In_Frame_Del	DEL	ACCTCCGGAGCCGTAGCTGCT	ACCTCCGGAGCCGTAGCTGCT	-			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	ACCTCCGGAGCCGTAGCTGCT	ACCTCCGGAGCCGTAGCTGCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	12	53069223	53069243	ACCTCCGGAGCCGTAGCTGCT	-	DEL	KRT1	ENST00000252244	human	ensembl	74_37	-1	known	in_frame_del	c.1689_1669	p.SSYGSGG557in_frame_del	0.630:0.649:0.647:0.620:0.134:0.123:0.092:0.297:0.354:0.356:0.356:0.216:0.007:0.001:0.003:0.006:0.057:0.050:0.289:0.318:0.300	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT1	HGNC	ENSG00000167768	tier1			NA	NA	NA	NA	NA	NA
ATRX	0	genome.wustl.edu	37	X	76938686	76938686	+	Nonsense_Mutation	SNP	T	T	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	X	76938686	76938686	T	A	SNP	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	nonsense	c.2062	p.K688*	0.984	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1	-	-	28	0	0.00	24	22	47.83
SKAP1	0	genome.wustl.edu	37	17	46507467	46507467	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	17	46507467	46507467	G	A	SNP	SKAP1	ENST00000336915	human	ensembl	74_37	-1	known	missense	c.16	p.L6F	0.998	NULL	pfam_Pleckstrin_homology,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	SKAP1	HGNC	ENSG00000141293	tier1	-	-	109	0	0.00	135	28	17.18
KATNAL1	0	genome.wustl.edu	37	13	30829681	30829681	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	13	30829681	30829681	G	A	SNP	KATNAL1	ENST00000380615	human	ensembl	74_37	-1	known	missense	c.395	p.A132V	1.000	NULL	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_ATPase_AAA-2,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	KATNAL1	HGNC	ENSG00000102781	tier1	-	-	140	0	0.00	53	61	52.59
PRKCQ	0	genome.wustl.edu	37	10	6553127	6553127	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	10	6553127	6553127	G	T	SNP	PRKCQ	ENST00000263125	human	ensembl	74_37	-1	known	missense	c.148	p.P50T	1.000	superfamily_C2_dom,pirsf_Prot_kin_PKC_delta	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKCQ	HGNC	ENSG00000065675	tier1	-	-	44	0	0.00	51	5	8.93
CACNA2D3	0	genome.wustl.edu	37	3	55107538	55107538	+	Silent	SNP	C	C	G			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	3	55107538	55107538	C	G	SNP	CACNA2D3	ENST00000288197	human	ensembl	74_37	+1	known	silent	c.3054	p.L1018	1.000	NULL	pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D3	HGNC	ENSG00000157445	tier1	-	-	89	0	0.00	71	59	45.38
LIAS	0	genome.wustl.edu	37	4	39462463	39462464	+	Frame_Shift_Ins	INS	-	-	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	4	39462463	39462464	-	A	INS	LIAS	ENST00000261434	human	ensembl	74_37	+1	known	frame_shift_ins	c.99_100	p.E36fs	0.695:0.641	pirsf_Lipoyl_synth	pfam_rSAM,smart_Elp3/MiaB/NifB,pirsf_Lipoyl_synth,tigrfam_Lipoyl_synth	-	no_errors	LIAS	HGNC	ENSG00000121897	tier1			34	0	0.00	46	5	9.80
SBNO1	0	genome.wustl.edu	37	12	123812034	123812034	+	Missense_Mutation	SNP	T	T	C			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	12	123812034	123812034	T	C	SNP	SBNO1	ENST00000420886	human	ensembl	74_37	-1	known	missense	c.1631	p.K544R	1.000	NULL	pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Prismane-like	-	no_errors	SBNO1	HGNC	ENSG00000139697	tier1	-	-	34	0	0.00	29	9	23.68
MEFV	0	genome.wustl.edu	37	16	3299631	3299631	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	16	3299631	3299631	G	A	SNP	MEFV	ENST00000219596	human	ensembl	74_37	-1	known	missense	c.1060	p.R354W	0.000	NULL	pfam_DAPIN,pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,superfamily_DEATH-like_dom,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_DAPIN,pfscan_Znf_B-box,prints_Butyrophylin	-	no_errors	MEFV	HGNC	ENSG00000103313	tier1	rs104895116	-	87	0	0.00	125	50	28.57
SGPL1	0	genome.wustl.edu	37	10	72619225	72619225	+	Missense_Mutation	SNP	T	T	C			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	10	72619225	72619225	T	C	SNP	SGPL1	ENST00000373202	human	ensembl	74_37	+1	known	missense	c.584	p.L195P	1.000	superfamily_PyrdxlP-dep_Trfase	pfam_PyrdxlP-dep_de-COase,pfam_Aminotrans_V/Cys_dSase,pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	-	no_errors	SGPL1	HGNC	ENSG00000166224	tier1	-	-	153	0	0.00	62	44	41.51
MCC	0	genome.wustl.edu	37	5	112824048	112824049	+	In_Frame_Ins	INS	-	-	GCC			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	5	112824048	112824049	-	GCC	INS	MCC	ENST00000408903	human	ensembl	74_37	-1	putative	in_frame_ins	c.64_63	p.21in_frame_insG	0.854:0.894	NULL	pfam_USH1C-bd_PDZ_domain,superfamily_tRNA-bd_arm,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MCC	HGNC	ENSG00000171444	tier1			26	0	0.00	23	8	25.81
GPR112	0	genome.wustl.edu	37	X	135426697	135426697	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	X	135426697	135426697	G	T	SNP	GPR112	ENST00000370652	human	ensembl	74_37	+1	known	missense	c.832	p.A278S	0.002	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR112	HGNC	ENSG00000156920	tier1	-	-	59	0	0.00	42	4	8.70
ZNF276	0	genome.wustl.edu	37	16	89799797	89799797	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	16	89799797	89799797	G	T	SNP	ZNF276	ENST00000443381	human	ensembl	74_37	+1	known	missense	c.1257	p.W419C	1.000	NULL	pfam_Znf_AD,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF276	HGNC	ENSG00000158805	tier1	-	-	46	0	0.00	30	4	11.76
MLIP	0	genome.wustl.edu	37	6	53986311	53986311	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	6	53986311	53986311	C	A	SNP	MLIP	ENST00000274897	human	ensembl	74_37	+1	known	missense	c.130	p.P44T	1.000	NULL	NULL	-	no_errors	MLIP	HGNC	ENSG00000146147	tier1	-	-	53	0	0.00	68	13	16.05
SEMA3C	0	genome.wustl.edu	37	7	80535212	80535212	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	7	80535212	80535212	C	A	SNP	SEMA3C	ENST00000411788	human	ensembl	74_37	-1	known	missense	c.124	p.V42L	0.000	NULL	NULL	-	no_errors	SEMA3C	HGNC	ENSG00000075223	tier1	-	-	49	0	0.00	36	4	10.00
MRGPRX4	0	genome.wustl.edu	37	11	18195645	18195645	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	11	18195645	18195645	G	A	SNP	MRGPRX4	ENST00000314254	human	ensembl	74_37	+1	known	missense	c.842	p.R281H	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	MRGPRX4	HGNC	ENSG00000179817	tier1	-	-	67	0	0.00	33	52	61.18
AMOT	0	genome.wustl.edu	37	X	112022791	112022791	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	X	112022791	112022791	G	A	SNP	AMOT	ENST00000371959	human	ensembl	74_37	-1	known	missense	c.2591	p.T864I	1.000	NULL	pfam_Angiomotin_C,superfamily_Prefoldin,prints_Angiomotin	-	no_errors	AMOT	HGNC	ENSG00000126016	tier1	-	-	70	0	0.00	92	10	9.80
SOX3	0	genome.wustl.edu	37	X	139586763	139586763	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	X	139586763	139586763	G	A	SNP	SOX3	ENST00000370536	human	ensembl	74_37	-1	known	missense	c.463	p.R155C	1.000	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_HMG_box_dom,pfam_TF_SOX,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX3	HGNC	ENSG00000134595	tier1	-	-	142	0	0.00	194	34	14.91
SH3BP5-AS1	0	genome.wustl.edu	37	3	15300271	15300271	+	RNA	SNP	A	A	G			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	3	15300271	15300271	A	G	SNP	SH3BP5-AS1	ENST00000413977	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SH3BP5-AS1	HGNC	ENSG00000224660	tier1	-	-	33	0	0.00	35	4	10.26
INPP5D	0	genome.wustl.edu	37	2	234055015	234055015	+	Silent	SNP	C	C	G			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	2	234055015	234055015	C	G	SNP	INPP5D	ENST00000359570	human	ensembl	74_37	+1	known	silent	c.801	p.V267	1.000	NULL	pfam_Endo/exonuclease/phosphatase,pfam_SH2,superfamily_Endo/exonuclease/phosphatase,smart_SH2,smart_IPPc,pfscan_SH2,prints_SH2	-	no_errors	INPP5D	HGNC	ENSG00000168918	tier1	-	-	66	0	0.00	10	40	80.00
BAZ2B	0	genome.wustl.edu	37	2	160317644	160317645	+	RNA	INS	-	-	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	2	160317644	160317645	-	T	INS	BAZ2B	ENST00000483316	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005:0.155	-	-	-	no_errors	BAZ2B	HGNC	ENSG00000123636	tier1			13	0	0.00	14	3	17.65
SPIB	0	genome.wustl.edu	37	19	50923209	50923209	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	19	50923209	50923209	C	A	SNP	SPIB	ENST00000595883	human	ensembl	74_37	+1	known	missense	c.30	p.D10E	0.990	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	SPIB	HGNC	ENSG00000269404	tier1	-	-	240	0	0.00	127	69	35.20
CCR5	0	genome.wustl.edu	37	3	46414944	46414975	+	Frame_Shift_Del	DEL	ACAGTCAGTATCAATTCTGGAAGAATTTCCAG	ACAGTCAGTATCAATTCTGGAAGAATTTCCAG	-			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	ACAGTCAGTATCAATTCTGGAAGAATTTCCAG	ACAGTCAGTATCAATTCTGGAAGAATTTCCAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	3	46414944	46414975	ACAGTCAGTATCAATTCTGGAAGAATTTCCAG	-	DEL	CCR5	ENST00000292303	human	ensembl	74_37	+1	known	frame_shift_del	c.551_582	p.S185fs	0.000:0.000:0.000:0.000:0.000:0.535:0.487:0.052:0.002:0.000:0.000:0.000:0.000:0.000:0.012:0.815:0.918:1.000:1.000:1.000:1.000:0.903:0.820:0.363:0.169:0.001:0.138:0.144:0.013:0.014:0.007:0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CCR5,prints_Chemokine_CCR1	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_rcpt,prints_GPCR_Rhodpsn,prints_Chemokine_CCR5,prints_Chemokine_CCR1,prints_ATII_rcpt	-	no_errors	CCR5	HGNC	ENSG00000160791	tier1			NA	NA	NA	NA	NA	NA
CFDP1	0	genome.wustl.edu	37	16	75327731	75327732	+	RNA	INS	-	-	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	16	75327731	75327732	-	A	INS	CFDP1	ENST00000570103	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.904:0.940	-	-	-	no_errors	CFDP1	HGNC	ENSG00000153774	tier1			24	0	0.00	30	3	9.09
CCDC171	0	genome.wustl.edu	37	9	15744289	15744290	+	Frame_Shift_Ins	INS	-	-	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	9	15744289	15744290	-	A	INS	CCDC171	ENST00000380701	human	ensembl	74_37	+1	known	frame_shift_ins	c.2068_2069	p.N692fs	1.000:1.000	superfamily_STAT_TF_coiled-coil	superfamily_STAT_TF_coiled-coil	-	no_errors	CCDC171	HGNC	ENSG00000164989	tier1			64	0	0.00	41	7	14.58
ERG	0	genome.wustl.edu	37	21	39947669	39947669	+	RNA	SNP	C	C	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	21	39947669	39947669	C	T	SNP	ERG	ENST00000485493	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.073	-	-	-	no_errors	ERG	HGNC	ENSG00000157554	tier1	-	-	40	0	0.00	3	26	89.66
TMEM132C	0	genome.wustl.edu	37	12	129190234	129190234	+	Silent	SNP	G	G	C			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	12	129190234	129190234	G	C	SNP	TMEM132C	ENST00000435159	human	ensembl	74_37	+1	known	silent	c.2721	p.G907	0.049	NULL	NULL	-	no_errors	TMEM132C	HGNC	ENSG00000181234	tier1	-	-	83	0	0.00	78	22	22.00
KCNJ12	0	genome.wustl.edu	37	17	21318772	21318772	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	17	21318772	21318772	C	T	SNP	KCNJ12	ENST00000331718	human	ensembl	74_37	+1	known	missense	c.118	p.R40C	1.000	pfam_K_chnl_inward-rec_Kir_N,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC	ENSG00000184185	tier1	-	-	129	0	0.00	168	27	13.85
ALG1L13P	0	genome.wustl.edu	37	8	8095821	8095821	+	RNA	SNP	T	T	C			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	8	8095821	8095821	T	C	SNP	ALG1L13P	ENST00000518201	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ALG1L13P	HGNC	ENSG00000253981	tier1	-	-	274	0	0.00	386	44	10.23
SLIT2	0	genome.wustl.edu	37	4	20530661	20530661	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	4	20530661	20530661	G	T	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	missense	c.1552	p.D518Y	1.000	pfam_LRR-contain_N,smart_LRR-contain_N	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147	tier1	-	-	50	0	0.00	74	8	9.76
TUBGCP2	0	genome.wustl.edu	37	10	135094822	135094822	+	Missense_Mutation	SNP	T	T	C			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	10	135094822	135094822	T	C	SNP	TUBGCP2	ENST00000543663	human	ensembl	74_37	-1	known	missense	c.2612	p.Y871C	1.000	NULL	pfam_TUBGCP,superfamily_Ocr	-	no_errors	TUBGCP2	HGNC	ENSG00000130640	tier1	-	-	76	0	0.00	45	20	30.30
ENSG00000249275	0	genome.wustl.edu	37	4	158559249	158559249	+	RNA	SNP	A	A	C			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	4	158559249	158559249	A	C	SNP	ENSG00000249275	ENST00000507296	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.020	-	-	-	no_errors	RP11-364P22.2	Clone_based_vega_gene	ENSG00000249275	tier1	-	-	8	0	0.00	4	8	66.67
TTLL9	0	genome.wustl.edu	37	20	30522516	30522516	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	20	30522516	30522516	C	T	SNP	TTLL9	ENST00000375938	human	ensembl	74_37	+1	known	missense	c.829	p.R277C	1.000	pfam_TTL/TTLL_fam	pfam_TTL/TTLL_fam	-	no_errors	TTLL9	HGNC	ENSG00000131044	tier1	-	-	34	0	0.00	43	32	42.11
HCN2	0	genome.wustl.edu	37	19	590536	590536	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	19	590536	590536	G	T	SNP	HCN2	ENST00000251287	human	ensembl	74_37	+1	known	missense	c.591	p.K197N	1.000	pfam_Ion_trans_N	pfam_Ion_trans_N,pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	-	no_errors	HCN2	HGNC	ENSG00000099822	tier1	-	-	47	0	0.00	33	4	10.81
FRY	0	genome.wustl.edu	37	13	32811825	32811825	+	Silent	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	13	32811825	32811825	G	T	SNP	FRY	ENST00000380250	human	ensembl	74_37	+1	known	silent	c.6120	p.L2040	0.620	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FRY	HGNC	ENSG00000073910	tier1	-	-	45	0	0.00	43	4	8.51
PNPLA6	0	genome.wustl.edu	37	19	7619936	7619936	+	Missense_Mutation	SNP	T	T	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	19	7619936	7619936	T	A	SNP	PNPLA6	ENST00000414982	human	ensembl	74_37	+1	known	missense	c.2822	p.F941Y	1.000	NULL	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA6	HGNC	ENSG00000032444	tier1	-	-	49	0	0.00	39	10	20.41
TPH2	0	genome.wustl.edu	37	12	72425429	72425429	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	12	72425429	72425429	C	T	SNP	TPH2	ENST00000333850	human	ensembl	74_37	+1	known	missense	c.1427	p.T476I	1.000	pfam_Aromatic-AA_hydroxylase_C,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,tigrfam_Trp_5_mOase	pfam_Aromatic-AA_hydroxylase_C,pfam_ACT_dom,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,prints_Aromatic-AA_hydroxylase_C,tigrfam_Trp_5_mOase	-	no_errors	TPH2	HGNC	ENSG00000139287	tier1	-	-	47	0	0.00	48	9	15.79
FRY	0	genome.wustl.edu	37	13	32711073	32711073	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	13	32711073	32711073	G	T	SNP	FRY	ENST00000380250	human	ensembl	74_37	+1	known	missense	c.1143	p.W381C	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	FRY	HGNC	ENSG00000073910	tier1	-	-	42	0	0.00	34	4	10.53
ENSG00000235852	0	genome.wustl.edu	37	2	191745599	191745622	+	RNA	DEL	GCAGCAGCAGCAGCAGCAGCAGCA	GCAGCAGCAGCAGCAGCAGCAGCA	-			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	GCAGCAGCAGCAGCAGCAGCAGCA	GCAGCAGCAGCAGCAGCAGCAGCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	2	191745599	191745622	GCAGCAGCAGCAGCAGCAGCAGCA	-	DEL	ENSG00000235852	ENST00000413911	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000:0.002:0.001:0.000:0.000:0.000:0.001:0.001:0.001:0.001:0.002:0.001:0.001:0.002:0.002:0.001:0.000:0.000:0.000:0.000:0.000:0.001	-	-	-	no_errors	AC005540.3	Clone_based_vega_gene	ENSG00000235852	tier1			NA	NA	NA	NA	NA	NA
C1orf106	0	genome.wustl.edu	37	1	200880698	200880698	+	Silent	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	1	200880698	200880698	G	A	SNP	C1orf106	ENST00000367342	human	ensembl	74_37	+1	known	silent	c.1332	p.P444	0.687	NULL	pfam_DUF3338	-	no_errors	C1orf106	HGNC	ENSG00000163362	tier1	-	-	98	0	0.00	50	25	32.89
IFIT5	0	genome.wustl.edu	37	10	91177561	91177561	+	Missense_Mutation	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	10	91177561	91177561	G	T	SNP	IFIT5	ENST00000371795	human	ensembl	74_37	+1	known	missense	c.605	p.G202V	0.657	pfscan_TPR-contain_dom	pfam_TPR_2,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	IFIT5	HGNC	ENSG00000152778	tier1	-	-	52	0	0.00	38	4	9.52
ZNF536	0	genome.wustl.edu	37	19	30935562	30935562	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	19	30935562	30935562	C	A	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	missense	c.1093	p.R365S	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597	tier1	-	-	77	0	0.00	56	14	20.00
RASSF8	0	genome.wustl.edu	37	12	26218075	26218075	+	Nonsense_Mutation	SNP	A	A	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	12	26218075	26218075	A	T	SNP	RASSF8	ENST00000282884	human	ensembl	74_37	+1	known	nonsense	c.748	p.K250*	0.998	NULL	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc	-	no_errors	RASSF8	HGNC	ENSG00000123094	tier1	-	-	40	0	0.00	27	10	27.03
FAM182B	0	genome.wustl.edu	37	20	25755837	25755837	+	Missense_Mutation	SNP	G	G	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	20	25755837	25755837	G	A	SNP	FAM182B	ENST00000376404	human	ensembl	74_37	-1	known	missense	c.110	p.P37L	0.210	NULL	NULL	-	no_errors	FAM182B	HGNC	ENSG00000175170	tier1	-	-	121	0	0.00	60	12	16.67
CLPTM1	0	genome.wustl.edu	37	19	45489826	45489826	+	Silent	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	19	45489826	45489826	G	T	SNP	CLPTM1	ENST00000337392	human	ensembl	74_37	+1	known	silent	c.786	p.L262	1.000	pfam_CLPTM1	pfam_CLPTM1	-	no_errors	CLPTM1	HGNC	ENSG00000104853	tier1	-	-	28	0	0.00	22	4	15.38
GRM6	0	genome.wustl.edu	37	5	178413971	178413971	+	Silent	SNP	G	G	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	5	178413971	178413971	G	T	SNP	GRM6	ENST00000231188	human	ensembl	74_37	-1	known	silent	c.1368	p.T456	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_6,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM6	HGNC	ENSG00000113262	tier1	-	-	42	0	0.00	31	4	11.43
ALDH1L1	0	genome.wustl.edu	37	3	125877353	125877353	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	3	125877353	125877353	C	A	SNP	ALDH1L1	ENST00000393434	human	ensembl	74_37	-1	known	missense	c.257	p.C86F	1.000	pfam_Formyl_transf_N,superfamily_Formyl_transf_N,pirsf_10_FTHF_DH	pfam_Aldehyde_DH_dom,pfam_Formyl_transf_N,pfam_Formyl_trans_C,pfam_Acyl_carrier_prot-like,superfamily_Ald_DH/histidinol_DH,superfamily_Formyl_transf_N,superfamily_Formyl_transferase_C-like,superfamily_Acyl_carrier_prot-like,pirsf_10_FTHF_DH,pfscan_Acyl_carrier_prot-like	-	no_errors	ALDH1L1	HGNC	ENSG00000144908	tier1	-	-	64	0	0.00	60	7	10.29
NRXN3	0	genome.wustl.edu	37	14	80327832	80327832	+	Missense_Mutation	SNP	C	C	A			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	14	80327832	80327832	C	A	SNP	NRXN3	ENST00000557594	human	ensembl	74_37	+1	novel	missense	c.1439	p.A480D	1.000	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Neurexin-like,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645	tier1	-	-	74	0	0.00	34	34	50.00
PMEL	0	genome.wustl.edu	37	12	56349572	56349572	+	Missense_Mutation	SNP	C	C	T			TCGA-SI-AA8B-01A-11D-A387-09	TCGA-SI-AA8B-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e8ac125-c26a-4677-9ddb-c0b6c8fa4ddb	47631d66-5a15-4dbc-a27c-c9505a24e1a8	12	56349572	56349572	C	T	SNP	PMEL	ENST00000360714	human	ensembl	74_37	-1	known	missense	c.1547	p.C516Y	1.000	NULL	pfam_PKD_dom,superfamily_PKD_dom,smart_PKD/Chitinase_dom,pfscan_PKD_dom	-	no_errors	PMEL	HGNC	ENSG00000185664	tier1	-	-	31	0	0.00	18	4	18.18
