Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
KHDRBS1	0	genome.wustl.edu	37	1	32503558	32503558	+	Missense_Mutation	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	1	32503558	32503558	C	T	SNP	KHDRBS1	ENST00000327300	human	ensembl	74_37	+1	known	missense	c.1028	p.P343L	0.997	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	KHDRBS1	HGNC	ENSG00000121774	tier1	-	-	52	0	0.00	89	8	8.25
DPH2	0	genome.wustl.edu	37	1	44437347	44437347	+	Missense_Mutation	SNP	A	A	G			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	1	44437347	44437347	A	G	SNP	DPH2	ENST00000255108	human	ensembl	74_37	+1	known	missense	c.773	p.Q258R	0.192	pfam_DPH1/DPH2,tigrfam_DPH1/DPH2,tigrfam_DHP2_eu	pfam_DPH1/DPH2,tigrfam_DPH1/DPH2,tigrfam_DHP2_eu	-	no_errors	DPH2	HGNC	ENSG00000132768	tier1	-	-	34	0	0.00	43	4	8.51
FLG2	0	genome.wustl.edu	37	1	152328366	152328366	+	Silent	SNP	G	G	C			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	1	152328366	152328366	G	C	SNP	FLG2	ENST00000388718	human	ensembl	74_37	-1	known	silent	c.1896	p.G632	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG2	HGNC	ENSG00000143520	tier1	-	-	107	1	0.92	118	27	18.49
LOC440700	0	genome.wustl.edu	37	1	165677941	165677941	+	RNA	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	1	165677941	165677941	C	T	SNP	LOC440700	ENST00000400982	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	RP11-466F5.6	Clone_based_vega_gene	ENSG00000215838	tier1	-	-	38	0	0.00	21	7	25.00
MT1HL1	0	genome.wustl.edu	37	1	237167633	237167633	+	Missense_Mutation	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	1	237167633	237167633	C	T	SNP	MT1HL1	ENST00000464121	human	ensembl	74_37	-1	known	missense	c.40	p.A14T	0.006	pfam_Metalthion_sfam_euk,superfamily_Metalthion_dom,prints_Metalthion_vert	pfam_Metalthion_sfam_euk,superfamily_Metalthion_dom,prints_Metalthion_vert	-	no_errors	MT1HL1	HGNC	ENSG00000244020	tier1	-	-	47	0	0.00	33	6	15.38
MYADML	0	genome.wustl.edu	37	2	33952141	33952141	+	RNA	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	2	33952141	33952141	C	T	SNP	MYADML	ENST00000474610	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MYADML	HGNC	ENSG00000239649	tier1	-	-	61	0	0.00	63	8	11.27
UBXN4	0	genome.wustl.edu	37	2	136530072	136530072	+	Missense_Mutation	SNP	A	A	G			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	2	136530072	136530072	A	G	SNP	UBXN4	ENST00000272638	human	ensembl	74_37	+1	known	missense	c.905	p.Q302R	1.000	NULL	pfam_UBX,superfamily_Thioredoxin-like_fold,smart_UBX,pfscan_UBX	-	no_errors	UBXN4	HGNC	ENSG00000144224	tier1	-	-	61	0	0.00	56	9	13.85
MYL1	0	genome.wustl.edu	37	2	211179643	211179643	+	Missense_Mutation	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	2	211179643	211179643	C	T	SNP	MYL1	ENST00000352451	human	ensembl	74_37	-1	known	missense	c.124	p.A42T	0.993	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MYL1	HGNC	ENSG00000168530	tier1	-	-	61	0	0.00	46	8	14.81
CPS1	0	genome.wustl.edu	37	2	211540493	211540493	+	Missense_Mutation	SNP	C	C	A			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	2	211540493	211540493	C	A	SNP	CPS1	ENST00000430249	human	ensembl	74_37	+1	known	missense	c.4221	p.N1407K	1.000	pfam_MGS-like_dom,superfamily_MGS-like_dom,smart_MGS-like_dom,tigrfam_CarbamoylP_synth_lsu	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_CarbamoylP_synth_lsu_oligo,pfam_GATASE,pfam_CarbamoylP_synth_lsu_N,pfam_MGS-like_dom,pfam_ATP-grasp_carboxylate-amine,pfam_Dala_Dala_lig_C,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu	-	no_errors	CPS1	HGNC	ENSG00000021826	tier1	-	-	43	0	0.00	42	6	12.50
STAC	0	genome.wustl.edu	37	3	36484919	36484919	+	Missense_Mutation	SNP	A	A	G			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	3	36484919	36484919	A	G	SNP	STAC	ENST00000273183	human	ensembl	74_37	+1	known	missense	c.175	p.N59D	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_SH3_domain,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_Spectrin_alpha_SH3,prints_SH3_domain	-	no_errors	STAC	HGNC	ENSG00000144681	tier1	-	-	35	0	0.00	29	4	12.12
LPHN3	0	genome.wustl.edu	37	4	62383199	62383199	+	Silent	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	4	62383199	62383199	C	T	SNP	LPHN3	ENST00000507625	human	ensembl	74_37	+1	known	silent	c.222	p.R74	1.000	NULL	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN3	HGNC	ENSG00000150471	tier1	-	-	64	0	0.00	68	9	11.69
ARHGAP26	0	genome.wustl.edu	37	5	142586906	142586906	+	Missense_Mutation	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	5	142586906	142586906	C	T	SNP	ARHGAP26	ENST00000274498	human	ensembl	74_37	+1	known	missense	c.2132	p.A711V	1.000	superfamily_SH3_domain	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,pfam_IRSp53/MIM_homology_IMD,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_RhoGAP_dom,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP26	HGNC	ENSG00000145819	tier1	-	-	31	0	0.00	47	5	9.62
FILIP1	0	genome.wustl.edu	37	6	76023331	76023331	+	Silent	SNP	A	A	G			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	6	76023331	76023331	A	G	SNP	FILIP1	ENST00000237172	human	ensembl	74_37	-1	known	silent	c.2217	p.D739	0.956	NULL	pfam_Cortactin-binding_p2_N,prints_Tropomyosin	-	no_errors	FILIP1	HGNC	ENSG00000118407	tier1	-	-	24	0	0.00	27	5	15.62
SASH1	0	genome.wustl.edu	37	6	148846428	148846428	+	Missense_Mutation	SNP	G	G	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	6	148846428	148846428	G	T	SNP	SASH1	ENST00000367467	human	ensembl	74_37	+1	known	missense	c.1211	p.R404I	1.000	pfam_rSAM/SH3_domain-containing	pfam_rSAM/SH3_domain-containing,pfam_SAM_2,pfam_SAM_type1,pfam_SH3_2,superfamily_SAM/pointed,superfamily_SH3_domain,smart_SH3_domain,smart_SAM,pfscan_SAM	-	no_errors	SASH1	HGNC	ENSG00000111961	tier1	-	-	50	0	0.00	40	18	31.03
ESRP1	0	genome.wustl.edu	37	8	95677276	95677276	+	Missense_Mutation	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	8	95677276	95677276	C	T	SNP	ESRP1	ENST00000433389	human	ensembl	74_37	+1	known	missense	c.877	p.R293W	1.000	smart_RRM_dom,pfscan_RRM_dom	superfamily_RNaseH-like_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ESRP1	HGNC	ENSG00000104413	tier1	-	-	68	0	0.00	65	17	20.73
ADCY8	0	genome.wustl.edu	37	8	132051899	132051899	+	Silent	SNP	G	G	A			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	8	132051899	132051899	G	A	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	silent	c.681	p.C227	0.998	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897	tier1	-	-	24	0	0.00	25	9	26.47
CD72	0	genome.wustl.edu	37	9	35616004	35616004	+	Silent	SNP	G	G	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	9	35616004	35616004	G	T	SNP	CD72	ENST00000259633	human	ensembl	74_37	-1	known	silent	c.624	p.A208	0.014	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CD72	HGNC	ENSG00000137101	tier1	-	-	41	0	0.00	38	4	9.52
LRIT2	0	genome.wustl.edu	37	10	85982349	85982349	+	Missense_Mutation	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	10	85982349	85982349	C	T	SNP	LRIT2	ENST00000538192	human	ensembl	74_37	-1	known	missense	c.1010	p.C337Y	0.998	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIT2	HGNC	ENSG00000204033	tier1	-	-	37	0	0.00	37	8	17.78
KCNK18	0	genome.wustl.edu	37	10	118969272	118969272	+	Missense_Mutation	SNP	C	C	A			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	10	118969272	118969272	C	A	SNP	KCNK18	ENST00000334549	human	ensembl	74_37	+1	known	missense	c.617	p.A206D	0.000	NULL	pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl	-	no_errors	KCNK18	HGNC	ENSG00000186795	tier1	-	-	36	0	0.00	44	4	8.33
ACCS	0	genome.wustl.edu	37	11	44104733	44104733	+	Missense_Mutation	SNP	G	G	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	11	44104733	44104733	G	T	SNP	ACCS	ENST00000263776	human	ensembl	74_37	+1	known	missense	c.1126	p.V376L	0.999	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	-	no_errors	ACCS	HGNC	ENSG00000110455	tier1	-	-	54	0	0.00	37	12	24.49
DGKZ	0	genome.wustl.edu	37	11	46400533	46400533	+	RNA	SNP	G	G	A			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	11	46400533	46400533	G	A	SNP	DGKZ	ENST00000529660	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.910	-	-	-	no_errors	DGKZ	HGNC	ENSG00000149091	tier1	-	-	26	0	0.00	14	3	17.65
OR9I1	0	genome.wustl.edu	37	11	57886113	57886113	+	Silent	SNP	C	C	A			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	11	57886113	57886113	C	A	SNP	OR9I1	ENST00000302610	human	ensembl	74_37	-1	known	silent	c.804	p.L268	0.106	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR9I1	HGNC	ENSG00000172377	tier1	-	-	42	0	0.00	38	4	9.52
KDM5A	0	genome.wustl.edu	37	12	417098	417098	+	Missense_Mutation	SNP	T	T	A			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	12	417098	417098	T	A	SNP	KDM5A	ENST00000399788	human	ensembl	74_37	-1	known	missense	c.3452	p.K1151M	1.000	superfamily_Znf_FYVE_PHD	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5A	HGNC	ENSG00000073614	tier1	-	-	42	0	0.00	45	4	8.16
RAD52	0	genome.wustl.edu	37	12	1023673	1023673	+	Silent	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	12	1023673	1023673	C	T	SNP	RAD52	ENST00000358495	human	ensembl	74_37	-1	known	silent	c.891	p.T297	0.003	NULL	pfam_Rad52_Rad22,tigrfam_DNA_recomb/repair_Rad52	-	no_errors	RAD52	HGNC	ENSG00000002016	tier1	-	-	39	0	0.00	39	4	9.30
OLR1	0	genome.wustl.edu	37	12	10321680	10321680	+	Silent	SNP	G	G	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	12	10321680	10321680	G	T	SNP	OLR1	ENST00000309539	human	ensembl	74_37	-1	known	silent	c.171	p.G57	0.000	NULL	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	OLR1	HGNC	ENSG00000173391	tier1	-	-	39	0	0.00	41	4	8.89
ENSG00000268091	0	genome.wustl.edu	37	12	131514553	131514553	+	Missense_Mutation	SNP	G	G	C			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	12	131514553	131514553	G	C	SNP	ENSG00000268091	ENST00000601092	human	ensembl	74_37	-1	novel	missense	c.217	p.P73A	0.005	NULL	NULL	-	no_stop_codon	AC078925.1	Clone_based_ensembl_gene	ENSG00000268091	tier1	-	-	310	1	0.32	269	29	9.70
ANG	0	genome.wustl.edu	37	14	21162109	21162109	+	Missense_Mutation	SNP	T	T	A			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	14	21162109	21162109	T	A	SNP	ANG	ENST00000336811	human	ensembl	74_37	+1	known	missense	c.386	p.V129D	0.157	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	-	no_errors	ANG	HGNC	ENSG00000214274	tier1	-	-	87	0	0.00	60	25	29.41
ATG14	0	genome.wustl.edu	37	14	55844703	55844703	+	Missense_Mutation	SNP	T	T	C			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	14	55844703	55844703	T	C	SNP	ATG14	ENST00000247178	human	ensembl	74_37	-1	known	missense	c.1085	p.Q362R	1.000	pfam_UV_resistance/autophagy_Atg14	pfam_UV_resistance/autophagy_Atg14	-	no_errors	ATG14	HGNC	ENSG00000126775	tier1	-	-	34	0	0.00	42	4	8.70
AHNAK2	0	genome.wustl.edu	37	14	105413459	105413459	+	Missense_Mutation	SNP	A	A	G			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	14	105413459	105413459	A	G	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.8329	p.S2777P	0.466	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	tier1	-	-	97	0	0.00	108	17	13.60
SLC28A2	0	genome.wustl.edu	37	15	45554234	45554234	+	Silent	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	15	45554234	45554234	C	T	SNP	SLC28A2	ENST00000347644	human	ensembl	74_37	+1	known	silent	c.192	p.S64	0.091	NULL	pfam_Nucleos_tra2_C,pfam_Nuclsd_transpt2,pfam_Nucleoside_recog_Gate,tigrfam_C_nuclsd_transpt_met_bac	-	no_errors	SLC28A2	HGNC	ENSG00000137860	tier1	-	-	60	0	0.00	56	5	8.20
MYO5C	0	genome.wustl.edu	37	15	52515824	52515824	+	Missense_Mutation	SNP	G	G	A			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	15	52515824	52515824	G	A	SNP	MYO5C	ENST00000261839	human	ensembl	74_37	-1	known	missense	c.3544	p.H1182Y	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5C	HGNC	ENSG00000128833	tier1	-	-	47	0	0.00	39	15	27.78
SNX20	0	genome.wustl.edu	37	16	50707735	50707735	+	Missense_Mutation	SNP	C	C	A			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	16	50707735	50707735	C	A	SNP	SNX20	ENST00000330943	human	ensembl	74_37	-1	known	missense	c.533	p.R178L	0.087	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX20	HGNC	ENSG00000167208	tier1	-	-	26	0	0.00	29	4	11.76
RAI1	0	genome.wustl.edu	37	17	17697974	17697974	+	Missense_Mutation	SNP	C	C	G			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	17	17697974	17697974	C	G	SNP	RAI1	ENST00000353383	human	ensembl	74_37	+1	known	missense	c.1712	p.S571C	1.000	NULL	smart_Znf_PHD	-	no_errors	RAI1	HGNC	ENSG00000108557	tier1	-	-	80	0	0.00	43	12	21.82
AATK	0	genome.wustl.edu	37	17	79096544	79096544	+	Silent	SNP	G	G	A			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	17	79096544	79096544	G	A	SNP	AATK	ENST00000326724	human	ensembl	74_37	-1	known	silent	c.1192	p.L398	1.000	smart_Ser/Thr_dual-sp_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	AATK	HGNC	ENSG00000181409	tier1	-	-	43	0	0.00	43	4	8.51
DSG2	0	genome.wustl.edu	37	18	29122660	29122660	+	Missense_Mutation	SNP	G	G	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	18	29122660	29122660	G	T	SNP	DSG2	ENST00000261590	human	ensembl	74_37	+1	known	missense	c.2179	p.G727C	0.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Desmoglein,prints_Desmosomal_cadherin	-	no_errors	DSG2	HGNC	ENSG00000046604	tier1	-	-	52	0	0.00	56	5	8.20
LIN37	0	genome.wustl.edu	37	19	36244131	36244131	+	Missense_Mutation	SNP	C	C	G			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	19	36244131	36244131	C	G	SNP	LIN37	ENST00000301159	human	ensembl	74_37	+1	known	missense	c.421	p.P141A	0.901	NULL	NULL	-	no_errors	LIN37	HGNC	ENSG00000267796	tier1	-	-	58	0	0.00	80	10	11.11
SYNE4	0	genome.wustl.edu	37	19	36497392	36497392	+	Missense_Mutation	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	19	36497392	36497392	C	T	SNP	SYNE4	ENST00000324444	human	ensembl	74_37	-1	known	missense	c.800	p.R267Q	0.030	NULL	pfam_KASH,pfscan_KASH	-	no_errors	SYNE4	HGNC	ENSG00000181392	tier1	rs200616477	-	56	0	0.00	72	7	8.86
SHANK1	0	genome.wustl.edu	37	19	51215298	51215298	+	Missense_Mutation	SNP	A	A	G			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	19	51215298	51215298	A	G	SNP	SHANK1	ENST00000391814	human	ensembl	74_37	-1	known	missense	c.866	p.M289T	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681	tier1	-	-	71	0	0.00	74	16	17.78
ZNF329	0	genome.wustl.edu	37	19	58639442	58639442	+	Missense_Mutation	SNP	G	G	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	19	58639442	58639442	G	T	SNP	ZNF329	ENST00000358067	human	ensembl	74_37	-1	known	missense	c.1429	p.H477N	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF329	HGNC	ENSG00000181894	tier1	-	-	35	0	0.00	42	4	8.70
GINS1	0	genome.wustl.edu	37	20	25422336	25422336	+	Splice_Site	SNP	A	A	G			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	20	25422336	25422336	A	G	SNP	GINS1	ENST00000262460	human	ensembl	74_37	+1	known	splice_site	c.448-2	e6-2	1.000	-	-	-	no_errors	GINS1	HGNC	ENSG00000101003	tier1	-	-	49	0	0.00	53	6	10.17
EPB41L1	0	genome.wustl.edu	37	20	34761735	34761735	+	Silent	SNP	G	G	A			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	20	34761735	34761735	G	A	SNP	EPB41L1	ENST00000338074	human	ensembl	74_37	+1	known	silent	c.36	p.K12	1.000	pirsf_Band_41_protein	pfam_Band_4.1_C,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_SAB_dom,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pirsf_Band_41_protein,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L1	HGNC	ENSG00000088367	tier1	-	-	44	0	0.00	44	6	12.00
CDH26	0	genome.wustl.edu	37	20	58577889	58577889	+	Missense_Mutation	SNP	C	C	G			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	20	58577889	58577889	C	G	SNP	CDH26	ENST00000348616	human	ensembl	74_37	+1	known	missense	c.2188	p.P730A	0.008	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH26	HGNC	ENSG00000124215	tier1	-	-	78	0	0.00	59	9	13.24
XPNPEP3	0	genome.wustl.edu	37	22	41322303	41322303	+	Missense_Mutation	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	22	41322303	41322303	C	T	SNP	XPNPEP3	ENST00000357137	human	ensembl	74_37	+1	known	missense	c.1388	p.A463V	0.934	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain	pfam_Pept_M24_structural-domain,pfam_Aminopep_P_N,superfamily_Pept_M24_structural-domain	-	no_errors	XPNPEP3	HGNC	ENSG00000196236	tier1	-	-	53	0	0.00	52	5	8.77
GYG2	0	genome.wustl.edu	37	X	2748131	2748131	+	RNA	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	X	2748131	2748131	C	T	SNP	GYG2	ENST00000381161	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.849	-	-	-	no_errors	GYG2	HGNC	ENSG00000056998	tier1	-	-	54	0	0.00	44	5	10.20
MAGED1	0	genome.wustl.edu	37	X	51638173	51638173	+	Missense_Mutation	SNP	G	G	A			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	X	51638173	51638173	G	A	SNP	MAGED1	ENST00000375695	human	ensembl	74_37	+1	known	missense	c.238	p.A80T	0.950	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGED1	HGNC	ENSG00000179222	tier1	-	-	61	0	0.00	86	16	15.69
ZCCHC12	0	genome.wustl.edu	37	X	117960020	117960020	+	Silent	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	X	117960020	117960020	C	T	SNP	ZCCHC12	ENST00000310164	human	ensembl	74_37	+1	known	silent	c.813	p.D271	0.946	NULL	superfamily_Znf_CCHC	-	no_errors	ZCCHC12	HGNC	ENSG00000174460	tier1	-	-	35	0	0.00	23	10	30.30
SPANXD	0	genome.wustl.edu	37	X	140786506	140786506	+	Missense_Mutation	SNP	G	G	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	X	140786506	140786506	G	T	SNP	SPANXD	ENST00000370515	human	ensembl	74_37	-1	known	missense	c.57	p.N19K	0.016	pfam_SPANX_prot	pfam_SPANX_prot	-	no_errors	SPANXD	HGNC	ENSG00000196406	tier1	-	-	196	1	0.51	111	17	13.28
MTM1	0	genome.wustl.edu	37	X	149840045	149840045	+	Missense_Mutation	SNP	C	C	T			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	X	149840045	149840045	C	T	SNP	MTM1	ENST00000370396	human	ensembl	74_37	+1	known	missense	c.1789	p.P597S	1.000	NULL	pfam_Myotubularin-like_Pase_dom,pfam_GRAM,smart_GRAM,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTM1	HGNC	ENSG00000171100	tier1	-	-	61	0	0.00	51	5	8.93
HSPD1	0	genome.wustl.edu	37	2	198353146	198353146	+	Frame_Shift_Del	DEL	T	T	-			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	2	198353146	198353146	T	-	DEL	HSPD1	ENST00000345042	human	ensembl	74_37	-1	known	frame_shift_del	c.1285	p.R429fs	1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chaprnin_Cpn60	pfam_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,superfamily_Cpn60/TCP-1,prints_Chaprnin_Cpn60,prints_Chaperone_TCP-1,tigrfam_Chaprnin_Cpn60	-	no_errors	HSPD1	HGNC	ENSG00000144381	tier1			20	0	0.00	39	9	18.75
EIF4H	0	genome.wustl.edu	37	7	73609499	73609499	+	Frame_Shift_Del	DEL	A	A	-			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	7	73609499	73609499	A	-	DEL	EIF4H	ENST00000265753	human	ensembl	74_37	+1	known	frame_shift_del	c.608	p.E203fs	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	EIF4H	HGNC	ENSG00000106682	tier1			46	0	0.00	37	11	22.92
KLHL26	0	genome.wustl.edu	37	19	18779509	18779509	+	Frame_Shift_Del	DEL	C	C	-			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	19	18779509	18779509	C	-	DEL	KLHL26	ENST00000300976	human	ensembl	74_37	+1	known	frame_shift_del	c.1302	p.R436fs	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL26	HGNC	ENSG00000167487	tier1			9	0	0.00	8	2	20.00
AR	0	genome.wustl.edu	37	X	66766390	66766390	+	Frame_Shift_Del	DEL	G	G	-			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	X	66766390	66766390	G	-	DEL	AR	ENST00000374690	human	ensembl	74_37	+1	known	frame_shift_del	c.1402	p.G468fs	0.005	NULL	pfam_Andrgn_rcpt,pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Andrgn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	AR	HGNC	ENSG00000169083	tier1			21	0	0.00	18	5	21.74
DMD	0	genome.wustl.edu	37	X	33229530	33229530	+	RNA	SNP	C	C	G			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	X	33229530	33229530	C	G	SNP	DMD	ENST00000463609	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.902	-	-	-	no_errors	DMD	HGNC	ENSG00000198947	tier1	-	-	71	0	0.00	73	19	20.65
YAF2	0	genome.wustl.edu	37	12	42629563	42629563	+	RNA	DEL	A	A	-			TCGA-VT-A80J-01A-11D-A36J-09	TCGA-VT-A80J-11A-22D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	695291d4-4e6c-46d1-aeff-2ddaf0fdd1ee	fd6129c3-faca-4233-9ba6-92cc70bcb0de	12	42629563	42629563	A	-	DEL	YAF2	ENST00000541702	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.986	-	-	-	no_errors	YAF2	HGNC	ENSG00000015153	tier1			27	0	0.00	34	7	17.07
