Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
NKRF	0	genome.wustl.edu	37	X	118722358	118722358	+	RNA	DEL	T	T	-			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	X	118722358	118722358	T	-	DEL	NKRF	ENST00000487600	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.949	-	-	-	no_errors	NKRF	HGNC	ENSG00000186416	tier1			15	0	0.00	17	5	22.73
MUM1L1	0	genome.wustl.edu	37	X	105451169	105451169	+	Missense_Mutation	SNP	T	T	C			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	X	105451169	105451169	T	C	SNP	MUM1L1	ENST00000337685	human	ensembl	74_37	+1	known	missense	c.1744	p.W582R	0.999	NULL	superfamily_PyrdxlP-dep_Trfase	-	no_errors	MUM1L1	HGNC	ENSG00000157502	tier1	-	-	18	0	0.00	0	23	100.00
CACNA1A	0	genome.wustl.edu	37	19	13318673	13318678	+	In_Frame_Del	DEL	CTGCTG	CTGCTG	-			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	CTGCTG	CTGCTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	19	13318673	13318678	CTGCTG	-	DEL	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	in_frame_del	c.6975_6970	p.QQ2324in_frame_del	0.259:0.316:0.374:0.432:0.459:0.497	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837	tier1			NA	NA	NA	NA	NA	NA
GPR98	0	genome.wustl.edu	37	5	90106396	90106396	+	Missense_Mutation	SNP	G	G	A			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	5	90106396	90106396	G	A	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.15319	p.V5107I	0.007	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	tier1	-	-	18	0	0.00	20	16	44.44
PTGES	0	genome.wustl.edu	37	9	132501706	132501707	+	RNA	INS	-	-	ACACAT			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	9	132501706	132501707	-	ACACAT	INS	PTGES	ENST00000481476	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	PTGES	HGNC	ENSG00000148344	tier1			NA	NA	NA	NA	NA	NA
RPA1	0	genome.wustl.edu	37	17	1782517	1782517	+	Nonsense_Mutation	SNP	T	T	A			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	17	1782517	1782517	T	A	SNP	RPA1	ENST00000254719	human	ensembl	74_37	+1	known	nonsense	c.768	p.Y256*	0.989	pfam_NA-bd_OB_tRNA,superfamily_NA-bd_OB-fold,tigrfam_Rep_factor_Rpa1	pfam_Rep_factor-A_C,pfam_Rep_factor-A_N,pfam_NA-bd_OB_tRNA,superfamily_NA-bd_OB-fold,tigrfam_Rep_factor_Rpa1	-	no_errors	RPA1	HGNC	ENSG00000132383	tier1	-	-	23	0	0.00	8	23	74.19
TNC	0	genome.wustl.edu	37	9	117853062	117853062	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	9	117853062	117853062	G	T	SNP	TNC	ENST00000350763	human	ensembl	74_37	-1	known	missense	c.236	p.P79Q	0.035	NULL	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNC	HGNC	ENSG00000041982	tier1	-	-	35	0	0.00	42	4	8.70
ABCC6	0	genome.wustl.edu	37	16	16271462	16271462	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	16	16271462	16271462	C	T	SNP	ABCC6	ENST00000205557	human	ensembl	74_37	-1	known	missense	c.2437	p.A813T	0.687	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC6	HGNC	ENSG00000091262	tier1	-	-	44	0	0.00	54	5	8.47
AHDC1	0	genome.wustl.edu	37	1	27875353	27875355	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	1	27875353	27875355	AGG	-	DEL	AHDC1	ENST00000247087	human	ensembl	74_37	-1	known	in_frame_del	c.3274_3272	p.S1091in_frame_del	1.000:1.000:1.000	NULL	NULL	-	no_errors	AHDC1	HGNC	ENSG00000126705	tier1			38	0	0.00	42	5	10.64
ZNF285	0	genome.wustl.edu	37	19	44891263	44891263	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	19	44891263	44891263	C	A	SNP	ZNF285	ENST00000330997	human	ensembl	74_37	-1	known	missense	c.1144	p.D382Y	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF285	HGNC	ENSG00000267508	tier1	-	-	90	0	0.00	48	47	49.47
RRN3P2	0	genome.wustl.edu	37	16	29110458	29110458	+	RNA	SNP	T	T	C			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	16	29110458	29110458	T	C	SNP	RRN3P2	ENST00000427965	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.991	-	-	-	no_errors	RRN3P2	HGNC	ENSG00000103472	tier1	-	-	50	0	0.00	107	14	11.57
LOC101929948	0	genome.wustl.edu	37	14	19563209	19563210	+	RNA	INS	-	-	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	14	19563209	19563210	-	T	INS	LOC101929948	ENST00000548748	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008:0.005	-	-	-	no_errors	CTD-2311B13.5	Clone_based_vega_gene	ENSG00000258252	tier1			15	0	0.00	16	5	23.81
ENSG00000258856	0	genome.wustl.edu	37	14	58096947	58096949	+	RNA	DEL	ATG	ATG	-			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	ATG	ATG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	14	58096947	58096949	ATG	-	DEL	ENSG00000258856	ENST00000600311	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.920:0.978:0.994	-	-	-	no_errors	CTD-2325K12.1	Clone_based_vega_gene	ENSG00000258856	tier1			42	0	0.00	46	4	8.00
CELF4	0	genome.wustl.edu	37	18	34825066	34825066	+	RNA	SNP	G	G	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	18	34825066	34825066	G	T	SNP	CELF4	ENST00000590011	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CELF4	HGNC	ENSG00000101489	tier1	-	-	8	0	0.00	7	8	53.33
ZAN	0	genome.wustl.edu	37	7	100385562	100385596	+	Frame_Shift_Del	DEL	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	-			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	7	100385562	100385596	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	-	DEL	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	frame_shift_del	c.7028_7062	p.F2344fs	0.013:0.005:0.000:0.001:0.000:0.000:0.005:0.239:0.512:0.532:0.543:0.259:0.193:0.551:0.747:0.746:0.691:0.313:0.001:0.036:0.867:0.876:0.710:0.622:0.357:0.357:0.884:0.969:0.998:1.000:1.000:1.000:1.000:0.989:0.652	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839	tier1			NA	NA	NA	NA	NA	NA
TMPRSS11D	0	genome.wustl.edu	37	4	68708322	68708322	+	Missense_Mutation	SNP	A	A	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	4	68708322	68708322	A	T	SNP	TMPRSS11D	ENST00000283916	human	ensembl	74_37	-1	known	missense	c.271	p.S91T	0.757	pirsf_Pept_S1A_HAT/DESC1,pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	pirsf_Pept_S1A_HAT/DESC1,pfam_Peptidase_S1,pfam_SEA_dom,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_SEA_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_SEA_dom,pfscan_Peptidase_S1	-	no_errors	TMPRSS11D	HGNC	ENSG00000153802	tier1	-	-	18	0	0.00	46	9	16.36
SFXN2	0	genome.wustl.edu	37	10	104497506	104497506	+	Missense_Mutation	SNP	A	A	G			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	10	104497506	104497506	A	G	SNP	SFXN2	ENST00000369893	human	ensembl	74_37	+1	known	missense	c.956	p.N319S	1.000	pfam_Mtc,tigrfam_Mtc	pfam_Mtc,tigrfam_Mtc	-	no_errors	SFXN2	HGNC	ENSG00000156398	tier1	rs201424155	GMAF=0.0005	29	0	0.00	28	29	50.88
CREB3L3	0	genome.wustl.edu	37	19	4171147	4171147	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	19	4171147	4171147	C	T	SNP	CREB3L3	ENST00000078445	human	ensembl	74_37	+1	known	missense	c.950	p.S317L	0.925	NULL	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	CREB3L3	HGNC	ENSG00000060566	tier1	-	-	40	0	0.00	33	35	51.47
SCN4B	0	genome.wustl.edu	37	11	118006807	118006808	+	RNA	INS	-	-	GGGGGAGAAGC			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	11	118006807	118006808	-	GGGGGAGAAGC	INS	SCN4B	ENST00000423160	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	SCN4B	HGNC	ENSG00000177098	tier1			NA	NA	NA	NA	NA	NA
ANKLE1	0	genome.wustl.edu	37	19	17394064	17394064	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	19	17394064	17394064	C	T	SNP	ANKLE1	ENST00000394458	human	ensembl	74_37	+1	known	missense	c.491	p.T164M	0.000	NULL	pfam_Ankyrin_rpt,pfam_LEM_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_LEM/LEM-like_dom,superfamily_Lactate_DH/Glyco_Ohase_4_C,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_LEM_dom	-	no_errors	ANKLE1	HGNC	ENSG00000160117	tier1	-	-	26	0	0.00	39	4	9.30
PSMD3	0	genome.wustl.edu	37	17	38146359	38146359	+	Missense_Mutation	SNP	C	C	G			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	17	38146359	38146359	C	G	SNP	PSMD3	ENST00000264639	human	ensembl	74_37	+1	known	missense	c.890	p.A297G	1.000	smart_PAM	pfam_26S_Psome_reg_C,pfam_PCI_dom,smart_PAM,smart_PCI_dom	-	no_errors	PSMD3	HGNC	ENSG00000108344	tier1	-	-	53	0	0.00	45	35	43.75
OR5P2	0	genome.wustl.edu	37	11	7817816	7817816	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	11	7817816	7817816	C	T	SNP	OR5P2	ENST00000329434	human	ensembl	74_37	-1	known	missense	c.674	p.R225H	0.435	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5P2	HGNC	ENSG00000183303	tier1	-	-	37	0	0.00	30	27	46.55
GPR158	0	genome.wustl.edu	37	10	25889363	25889363	+	RNA	DEL	A	A	-			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	10	25889363	25889363	A	-	DEL	GPR158	ENST00000490549	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.417	-	-	-	no_errors	GPR158	HGNC	ENSG00000151025	tier1			14	0	0.00	13	2	13.33
GEMIN8	0	genome.wustl.edu	37	X	14038512	14038512	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	X	14038512	14038512	G	T	SNP	GEMIN8	ENST00000380523	human	ensembl	74_37	-1	known	missense	c.157	p.P53T	0.011	NULL	NULL	-	no_errors	GEMIN8	HGNC	ENSG00000046647	tier1	-	-	19	0	0.00	15	4	21.05
SETX	0	genome.wustl.edu	37	9	135202975	135202975	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	9	135202975	135202975	C	A	SNP	SETX	ENST00000372169	human	ensembl	74_37	-1	known	missense	c.4010	p.R1337I	0.923	NULL	superfamily_P-loop_NTPase	-	no_errors	SETX	HGNC	ENSG00000107290	tier1	-	-	29	0	0.00	45	38	45.78
PICK1	0	genome.wustl.edu	37	22	38471034	38471036	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	22	38471034	38471036	GGA	-	DEL	PICK1	ENST00000356976	human	ensembl	74_37	+1	known	in_frame_del	c.1143_1145	p.E385in_frame_del	0.071:1.000:1.000	NULL	pfam_AH_dom,pfam_PDZ,pfam_BAR_dom,superfamily_PDZ,smart_PDZ,pfscan_AH_dom,pfscan_PDZ	-	no_errors	PICK1	HGNC	ENSG00000100151	tier1			23	0	0.00	23	3	11.54
OTX1	0	genome.wustl.edu	37	2	63283301	63283301	+	Silent	SNP	T	T	A			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	2	63283301	63283301	T	A	SNP	OTX1	ENST00000282549	human	ensembl	74_37	+1	known	silent	c.915	p.G305	0.997	NULL	pfam_Otx_TF_C,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Otx1_TF,prints_Otx_TF	-	no_errors	OTX1	HGNC	ENSG00000115507	tier1	-	-	41	0	0.00	33	29	46.77
DGKI	0	genome.wustl.edu	37	7	137257551	137257551	+	Nonsense_Mutation	SNP	C	C	A			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	7	137257551	137257551	C	A	SNP	DGKI	ENST00000288490	human	ensembl	74_37	-1	known	nonsense	c.1795	p.E599*	1.000	pfam_Diacylglycerol_kin_accessory,smart_Diacylglycerol_kin_accessory	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	DGKI	HGNC	ENSG00000157680	tier1	-	-	28	0	0.00	21	3	12.50
PRKAR1B	0	genome.wustl.edu	37	7	647042	647042	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	7	647042	647042	G	T	SNP	PRKAR1B	ENST00000360274	human	ensembl	74_37	-1	known	missense	c.488	p.T163N	0.919	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pirsf_cAMP_dep_PK_reg_su,pfscan_cNMP-bd_dom,prints_cAMP/cGMP_kin	pfam_cNMP-bd_dom,pfam_cAMP_dep_PK_reg_su_I/II_a/b,superfamily_cNMP-bd-like,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,smart_cAMP_dep_PK_reg_su_I/II_a/b,smart_cNMP-bd_dom,pirsf_cAMP_dep_PK_reg_su,pfscan_cNMP-bd_dom,prints_cAMP/cGMP_kin	-	no_errors	PRKAR1B	HGNC	ENSG00000188191	tier1	-	-	27	0	0.00	32	4	11.11
CPEB1	0	genome.wustl.edu	37	15	83297194	83297194	+	Missense_Mutation	SNP	G	G	C			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	15	83297194	83297194	G	C	SNP	CPEB1	ENST00000563800	human	ensembl	74_37	-1	putative	missense	c.17	p.A6G	0.118	NULL	pfscan_RRM_dom	-	no_errors	CPEB1	HGNC	ENSG00000214575	tier1	-	-	13	0	0.00	7	16	69.57
DIS3L2	0	genome.wustl.edu	37	2	232995570	232995570	+	RNA	DEL	A	A	-			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	2	232995570	232995570	A	-	DEL	DIS3L2	ENST00000470087	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DIS3L2	HGNC	ENSG00000144535	tier1			14	0	0.00	23	2	8.00
ZNF589	0	genome.wustl.edu	37	3	48309726	48309726	+	Missense_Mutation	SNP	A	A	G			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	3	48309726	48309726	A	G	SNP	ZNF589	ENST00000354698	human	ensembl	74_37	+1	known	missense	c.545	p.N182S	0.048	NULL	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF589	HGNC	ENSG00000164048	tier1	-	-	21	0	0.00	20	15	42.86
UGT2B11	0	genome.wustl.edu	37	4	70079967	70079967	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	4	70079967	70079967	C	A	SNP	UGT2B11	ENST00000446444	human	ensembl	74_37	-1	known	missense	c.474	p.E158D	1.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2B11	HGNC	ENSG00000213759	tier1	-	-	94	0	0.00	72	59	45.04
DNAJC9-AS1	0	genome.wustl.edu	37	10	75008170	75008170	+	RNA	SNP	G	G	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	10	75008170	75008170	G	T	SNP	DNAJC9-AS1	ENST00000440197	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DNAJC9-AS1	HGNC	ENSG00000236756	tier1	-	-	35	0	0.00	38	4	9.52
CHD9	0	genome.wustl.edu	37	16	53302010	53302010	+	Silent	SNP	A	A	G			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	16	53302010	53302010	A	G	SNP	CHD9	ENST00000398510	human	ensembl	74_37	+1	known	silent	c.4689	p.G1563	0.922	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD9	HGNC	ENSG00000177200	tier1	-	-	20	0	0.00	8	13	61.90
VWF	0	genome.wustl.edu	37	12	6184682	6184682	+	Silent	SNP	G	G	A			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	12	6184682	6184682	G	A	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	silent	c.693	p.T231	0.136	pirsf_VWF,pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799	tier1	-	-	62	0	0.00	41	32	43.84
MACF1	0	genome.wustl.edu	37	1	39835666	39835717	+	Frame_Shift_Del	DEL	TTAGTCTGGCAAGTAACAAAACTGCTTCATTGACAGAGAGAAAGATGCATCA	TTAGTCTGGCAAGTAACAAAACTGCTTCATTGACAGAGAGAAAGATGCATCA	-			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	TTAGTCTGGCAAGTAACAAAACTGCTTCATTGACAGAGAGAAAGATGCATCA	TTAGTCTGGCAAGTAACAAAACTGCTTCATTGACAGAGAGAAAGATGCATCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	1	39835666	39835717	TTAGTCTGGCAAGTAACAAAACTGCTTCATTGACAGAGAGAAAGATGCATCA	-	DEL	MACF1	ENST00000317713	human	ensembl	74_37	+1	known	frame_shift_del	c.6789_6768	p.R2274fs	0.055:0.031:0.000:0.000:0.013:0.023:0.020:0.004:0.004:0.005:0.013:0.021:0.028:0.810:0.820:0.813:0.686:0.438:0.151:0.046:0.011:0.000:0.002:0.082:0.260:0.176:0.100:0.003:0.002:0.113:0.958:0.968:0.980:0.997:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.999:1.000:1.000:0.983:0.998:0.998:0.986	smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1			NA	NA	NA	NA	NA	NA
HERC2P3	0	genome.wustl.edu	37	15	20657785	20657785	+	RNA	SNP	A	A	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	15	20657785	20657785	A	T	SNP	HERC2P3	ENST00000426501	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HERC2P3	HGNC	ENSG00000180229	tier1	-	-	263	1	0.38	236	109	31.59
YWHAG	0	genome.wustl.edu	37	7	75958930	75958930	+	Silent	SNP	G	G	A			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	7	75958930	75958930	G	A	SNP	YWHAG	ENST00000307630	human	ensembl	74_37	-1	known	silent	c.708	p.D236	0.728	pfam_14-3-3_domain,superfamily_14-3-3_domain,smart_14-3-3_domain,pirsf_14-3-3,prints_14-3-3	pfam_14-3-3_domain,superfamily_14-3-3_domain,smart_14-3-3_domain,pirsf_14-3-3,prints_14-3-3	-	no_errors	YWHAG	HGNC	ENSG00000170027	tier1	-	-	29	0	0.00	24	26	52.00
KRT27	0	genome.wustl.edu	37	17	38935802	38935802	+	Silent	SNP	T	T	C			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	17	38935802	38935802	T	C	SNP	KRT27	ENST00000301656	human	ensembl	74_37	-1	known	silent	c.924	p.K308	0.999	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT27	HGNC	ENSG00000171446	tier1	-	-	49	0	0.00	29	24	45.28
HPCA	0	genome.wustl.edu	37	1	33359548	33359548	+	RNA	SNP	G	G	A			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	1	33359548	33359548	G	A	SNP	HPCA	ENST00000459874	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HPCA	HGNC	ENSG00000121905	tier1	-	-	19	0	0.00	10	13	56.52
RHBDD2	0	genome.wustl.edu	37	7	75512836	75512837	+	RNA	INS	-	-	A			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	7	75512836	75512837	-	A	INS	RHBDD2	ENST00000467406	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.001:0.010	-	-	-	no_errors	RHBDD2	HGNC	ENSG00000005486	tier1			11	0	0.00	17	3	15.00
DNAJC1	0	genome.wustl.edu	37	10	22048139	22048139	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	10	22048139	22048139	C	T	SNP	DNAJC1	ENST00000376980	human	ensembl	74_37	-1	known	missense	c.1556	p.R519H	1.000	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	pfam_DnaJ_domain,pfam_SANT/Myb,superfamily_DnaJ_domain,superfamily_Homeodomain-like,smart_DnaJ_domain,smart_SANT/Myb,pfscan_Myb-like_dom,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC1	HGNC	ENSG00000136770	tier1	-	-	37	0	0.00	20	15	42.86
ADK	0	genome.wustl.edu	37	10	76154044	76154044	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	10	76154044	76154044	G	T	SNP	ADK	ENST00000286621	human	ensembl	74_37	+1	known	missense	c.419	p.C140F	1.000	pfam_PfkB_dom,prints_Adenokinase	pfam_PfkB_dom,prints_Adenokinase	-	no_errors	ADK	HGNC	ENSG00000156110	tier1	-	-	34	0	0.00	20	3	13.04
UNC13D	0	genome.wustl.edu	37	17	73839249	73839249	+	Nonsense_Mutation	SNP	G	G	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	17	73839249	73839249	G	T	SNP	UNC13D	ENST00000412096	human	ensembl	74_37	-1	known	nonsense	c.252	p.Y84*	0.997	NULL	pfam_C2_dom,pfam_Munc13_subgr_dom-2,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	UNC13D	HGNC	ENSG00000092929	tier1	-	-	25	0	0.00	24	4	14.29
PPP3CB	0	genome.wustl.edu	37	10	75239251	75239251	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	10	75239251	75239251	C	T	SNP	PPP3CB	ENST00000394829	human	ensembl	74_37	-1	known	missense	c.110	p.R37H	1.000	NULL	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP3CB	HGNC	ENSG00000107758	tier1	-	-	23	0	0.00	26	4	12.90
WBP11P1	0	genome.wustl.edu	37	18	30093484	30093484	+	RNA	SNP	A	A	T			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	18	30093484	30093484	A	T	SNP	WBP11P1	ENST00000567636	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	WBP11P1	HGNC	ENSG00000260389	tier1	-	-	28	0	0.00	25	19	43.18
NCOR2	0	genome.wustl.edu	37	12	124824721	124824722	+	In_Frame_Ins	INS	-	-	GCCGCTGCT			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	12	124824721	124824722	-	GCCGCTGCT	INS	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	in_frame_ins	c.5539_5538	p.1846in_frame_insSSG	1.000:0.999	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498	tier1			NA	NA	NA	NA	NA	NA
SPDYE2B	0	genome.wustl.edu	37	7	102294074	102294074	+	Missense_Mutation	SNP	T	T	C			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	7	102294074	102294074	T	C	SNP	SPDYE2B	ENST00000436228	human	ensembl	74_37	+1	known	missense	c.337	p.S113P	0.002	NULL	pfam_Cell_cycle_regulatory_Spy1	-	no_errors	SPDYE2B	HGNC	ENSG00000173678	tier1	-	-	8	0	0.00	6	4	40.00
MAP7D1	0	genome.wustl.edu	37	1	36636667	36636667	+	Missense_Mutation	SNP	C	C	G			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	1	36636667	36636667	C	G	SNP	MAP7D1	ENST00000373151	human	ensembl	74_37	+1	known	missense	c.142	p.P48A	1.000	NULL	pfam_MAP7	-	no_errors	MAP7D1	HGNC	ENSG00000116871	tier1	-	-	78	0	0.00	63	67	51.54
ENSG00000225946	0	genome.wustl.edu	37	7	100608123	100608124	+	RNA	INS	-	-	G			TCGA-WK-A8XQ-01A-11D-A37C-09	TCGA-WK-A8XQ-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a362ed3c-3c06-4aad-8b9e-a4b46b4cbcd3	779e9645-be20-45ce-842e-6224726c5e5a	7	100608123	100608124	-	G	INS	ENSG00000225946	ENST00000420080	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.037	-	-	-	no_errors	RP11-395B7.2	Clone_based_vega_gene	ENSG00000225946	tier1			12	0	0.00	12	7	36.84
