Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
SLC41A3	0	genome.wustl.edu	37	3	125725891	125725891	+	Missense_Mutation	SNP	C	C	G			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	3	125725891	125725891	C	G	SNP	SLC41A3	ENST00000360370	human	ensembl	74_37	-1	known	missense	c.1432	p.G478R	0.002	NULL	pfam_SLC41_membr_dom,superfamily_Acyl_Trfase/lysoPLipase	-	no_errors	SLC41A3	HGNC	ENSG00000114544	tier1	-	-	49	0	0.00	26	25	49.02
SERPINA4	0	genome.wustl.edu	37	14	95030338	95030338	+	Silent	SNP	C	C	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	14	95030338	95030338	C	T	SNP	SERPINA4	ENST00000298841	human	ensembl	74_37	+1	known	silent	c.519	p.Y173	0.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA4	HGNC	ENSG00000100665	tier1	-	-	54	0	0.00	27	14	34.15
KCNQ1	0	genome.wustl.edu	37	11	2798237	2798237	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	11	2798237	2798237	G	T	SNP	KCNQ1	ENST00000155840	human	ensembl	74_37	+1	known	missense	c.1707	p.K569N	1.000	pfam_K_chnl_volt-dep_KCNQ_C	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCQN1,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ1	HGNC	ENSG00000053918	tier1	-	-	118	0	0.00	63	62	49.60
ARHGAP30	0	genome.wustl.edu	37	1	161022453	161022453	+	Missense_Mutation	SNP	G	G	C			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	1	161022453	161022453	G	C	SNP	ARHGAP30	ENST00000368013	human	ensembl	74_37	-1	known	missense	c.799	p.R267G	0.994	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP30	HGNC	ENSG00000186517	tier1	-	-	45	0	0.00	20	23	52.27
PDS5A	0	genome.wustl.edu	37	4	39851192	39851192	+	Missense_Mutation	SNP	T	T	C			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	4	39851192	39851192	T	C	SNP	PDS5A	ENST00000303538	human	ensembl	74_37	-1	known	missense	c.3167	p.N1056S	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	PDS5A	HGNC	ENSG00000121892	tier1	-	-	87	0	0.00	31	28	47.46
FAM160A2	0	genome.wustl.edu	37	11	6244051	6244051	+	Missense_Mutation	SNP	G	G	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	11	6244051	6244051	G	A	SNP	FAM160A2	ENST00000265978	human	ensembl	74_37	-1	known	missense	c.1013	p.A338V	1.000	pfam_RetinoicA-induced_16-like	pfam_RetinoicA-induced_16-like	-	no_errors	FAM160A2	HGNC	ENSG00000051009	tier1	-	-	34	0	0.00	33	4	10.81
WDFY3	0	genome.wustl.edu	37	4	85758160	85758160	+	Silent	SNP	C	C	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	4	85758160	85758160	C	T	SNP	WDFY3	ENST00000295888	human	ensembl	74_37	-1	known	silent	c.498	p.V166	1.000	NULL	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl_sf,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625	tier1	-	-	89	0	0.00	34	38	52.78
COL12A1	0	genome.wustl.edu	37	6	75862069	75862069	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	6	75862069	75862069	C	A	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.3695	p.G1232V	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	tier1	-	-	42	0	0.00	21	17	44.74
ADCY2	0	genome.wustl.edu	37	5	7717343	7717343	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	5	7717343	7717343	G	T	SNP	ADCY2	ENST00000338316	human	ensembl	74_37	+1	known	missense	c.1696	p.A566S	1.000	pfam_Adenylate_cyclase-like	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY2	HGNC	ENSG00000078295	tier1	-	-	44	0	0.00	28	18	39.13
FOXD2	0	genome.wustl.edu	37	1	47904668	47904669	+	In_Frame_Ins	INS	-	-	CCGCAC			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	1	47904668	47904669	-	CCGCAC	INS	FOXD2	ENST00000334793	human	ensembl	74_37	+1	known	in_frame_ins	c.861_862	p.291in_frame_insPH	0.056:0.602	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD2	HGNC	ENSG00000186564	tier1			NA	NA	NA	NA	NA	NA
PTPRK	0	genome.wustl.edu	37	6	128321224	128321225	+	RNA	INS	-	-	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	6	128321224	128321225	-	A	INS	PTPRK	ENST00000524481	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.341:0.625	-	-	-	no_errors	PTPRK	HGNC	ENSG00000152894	tier1			10	0	0.00	19	4	17.39
UBE2C	0	genome.wustl.edu	37	20	44444191	44444191	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	20	44444191	44444191	C	A	SNP	UBE2C	ENST00000356455	human	ensembl	74_37	+1	known	missense	c.228	p.D76E	1.000	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2C	HGNC	ENSG00000175063	tier1	-	-	59	0	0.00	28	25	47.17
RDH13	0	genome.wustl.edu	37	19	55574429	55574430	+	RNA	INS	-	-	GGCGTCC			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	19	55574429	55574430	-	GGCGTCC	INS	RDH13	ENST00000589305	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004:0.003	-	-	-	no_errors	RDH13	HGNC	ENSG00000160439	tier1			NA	NA	NA	NA	NA	NA
LHCGR	0	genome.wustl.edu	37	2	48982755	48982756	+	In_Frame_Ins	INS	-	-	GCTGCA			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	2	48982755	48982756	-	GCTGCA	INS	LHCGR	ENST00000294954	human	ensembl	74_37	-1	known	in_frame_ins	c.56_55	p.19in_frame_insLQ	0.000:0.001	prints_TSH_rcpt	pfam_GPCR_Rhodpsn,prints_LSH_rcpt,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,prints_TSH_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	LHCGR	HGNC	ENSG00000138039	tier1			NA	NA	NA	NA	NA	NA
DNAH8	0	genome.wustl.edu	37	6	38862564	38862564	+	Missense_Mutation	SNP	A	A	G			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	6	38862564	38862564	A	G	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	missense	c.8020	p.K2674E	0.999	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721	tier1	-	-	57	0	0.00	48	26	35.14
ABHD10	0	genome.wustl.edu	37	3	111710511	111710521	+	Frame_Shift_Del	DEL	ACTTCTTGTTT	ACTTCTTGTTT	-			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	ACTTCTTGTTT	ACTTCTTGTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	3	111710511	111710521	ACTTCTTGTTT	-	DEL	ABHD10	ENST00000273359	human	ensembl	74_37	+1	known	frame_shift_del	c.864_874	p.L289fs	0.872:1.000:1.000:1.000:1.000:1.000:0.992:1.000:1.000:0.988:1.000	NULL	pfam_AB_hydrolase_1,pfam_Peptidase_S9	-	no_errors	ABHD10	HGNC	ENSG00000144827	tier1			NA	NA	NA	NA	NA	NA
ANAPC2	0	genome.wustl.edu	37	9	140075277	140075277	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	9	140075277	140075277	C	T	SNP	ANAPC2	ENST00000323927	human	ensembl	74_37	-1	known	missense	c.1573	p.D525N	0.999	pfam_Cullin_N,superfamily_Cullin_homology,smart_Cullin_homology,pfscan_Cullin_homology	pfam_Cullin_N,pfam_APC_su2_C,superfamily_Cullin_homology,smart_Cullin_homology,pfscan_Cullin_homology	-	no_errors	ANAPC2	HGNC	ENSG00000176248	tier1	-	-	88	0	0.00	48	33	40.74
C9orf78	0	genome.wustl.edu	37	9	132595849	132595850	+	RNA	INS	-	-	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	9	132595849	132595850	-	T	INS	C9orf78	ENST00000461762	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.032	-	-	-	no_errors	C9orf78	HGNC	ENSG00000136819	tier1			48	0	0.00	37	8	17.78
GDNF	0	genome.wustl.edu	37	5	37834785	37834785	+	Silent	SNP	G	G	C			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	5	37834785	37834785	G	C	SNP	GDNF	ENST00000326524	human	ensembl	74_37	-1	known	silent	c.114	p.L38	0.999	pirsf_GDNF	pfam_TGF-b_C,smart_TGF-b_C,pirsf_GDNF	-	no_errors	GDNF	HGNC	ENSG00000168621	tier1	-	-	71	0	0.00	35	34	49.28
TNFSF18	0	genome.wustl.edu	37	1	173019993	173019993	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	1	173019993	173019993	C	A	SNP	TNFSF18	ENST00000404377	human	ensembl	74_37	-1	known	missense	c.110	p.R37I	0.000	NULL	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom	-	no_errors	TNFSF18	HGNC	ENSG00000120337	tier1	-	-	42	0	0.00	40	4	9.09
NWD1	0	genome.wustl.edu	37	19	16860069	16860069	+	Silent	SNP	A	A	C			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	19	16860069	16860069	A	C	SNP	NWD1	ENST00000379808	human	ensembl	74_37	+1	known	silent	c.616	p.R206	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NWD1	HGNC	ENSG00000188039	tier1	-	-	45	0	0.00	28	24	46.15
MOXD1	0	genome.wustl.edu	37	6	132649242	132649242	+	Missense_Mutation	SNP	G	G	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	6	132649242	132649242	G	A	SNP	MOXD1	ENST00000367963	human	ensembl	74_37	-1	known	missense	c.856	p.P286S	1.000	pfam_Cu2_ascorb_mOase_N,superfamily_PHM/PNGase_F_dom,prints_Dopamine_b_mOase	pfam_Cu2_ascorb_mOase_N,pfam_DOMON_domain,superfamily_PHM/PNGase_F_dom,smart_DOMON_domain,pfscan_DOMON_domain,prints_Dopamine_b_mOase	-	no_errors	MOXD1	HGNC	ENSG00000079931	tier1	-	-	67	0	0.00	29	6	17.14
CDH6	0	genome.wustl.edu	37	5	31323070	31323070	+	Silent	SNP	C	C	G			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	5	31323070	31323070	C	G	SNP	CDH6	ENST00000265071	human	ensembl	74_37	+1	known	silent	c.2028	p.T676	1.000	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH6	HGNC	ENSG00000113361	tier1	-	-	64	0	0.00	36	34	48.57
GLI3	0	genome.wustl.edu	37	7	42007256	42007256	+	Missense_Mutation	SNP	A	A	G			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	7	42007256	42007256	A	G	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	missense	c.2369	p.F790S	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571	tier1	-	-	93	0	0.00	45	46	50.55
UBE3B	0	genome.wustl.edu	37	12	109921780	109921780	+	Silent	SNP	T	T	C			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	12	109921780	109921780	T	C	SNP	UBE3B	ENST00000342494	human	ensembl	74_37	+1	known	silent	c.276	p.D92	0.957	superfamily_P-loop_NTPase	pfam_HECT,pfam_IQ_motif_EF-hand-BS,superfamily_HECT,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,smart_HECT,pfscan_HECT,pfscan_IQ_motif_EF-hand-BS	-	no_errors	UBE3B	HGNC	ENSG00000151148	tier1	-	-	18	0	0.00	11	4	26.67
TNK1	0	genome.wustl.edu	37	17	7287395	7287395	+	Missense_Mutation	SNP	C	C	G			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	17	7287395	7287395	C	G	SNP	TNK1	ENST00000576812	human	ensembl	74_37	+1	known	missense	c.689	p.A230G	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_SAM/pointed,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TNK1	HGNC	ENSG00000174292	tier1	-	-	43	0	0.00	33	26	44.07
PKHD1	0	genome.wustl.edu	37	6	51701242	51701242	+	Silent	SNP	G	G	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	6	51701242	51701242	G	A	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	silent	c.8133	p.V2711	0.000	NULL	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927	tier1	-	-	59	0	0.00	41	20	32.26
EML2	0	genome.wustl.edu	37	19	46137656	46137656	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	19	46137656	46137656	C	A	SNP	EML2	ENST00000587152	human	ensembl	74_37	-1	known	missense	c.856	p.A286S	1.000	pfam_HELP,superfamily_Quinonprotein_ADH-like_supfam	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_Quinoprot_gluc/sorb_DH,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML2	HGNC	ENSG00000125746	tier1	-	-	117	0	0.00	67	58	46.40
ATF7IP	0	genome.wustl.edu	37	12	14538308	14538308	+	RNA	SNP	G	G	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	12	14538308	14538308	G	T	SNP	ATF7IP	ENST00000541654	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.984	-	-	-	no_errors	ATF7IP	HGNC	ENSG00000171681	tier1	-	-	35	0	0.00	30	20	40.00
TRIB2	0	genome.wustl.edu	37	2	12858577	12858577	+	Silent	SNP	G	G	C			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	2	12858577	12858577	G	C	SNP	TRIB2	ENST00000155926	human	ensembl	74_37	+1	known	silent	c.144	p.P48	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TRIB2	HGNC	ENSG00000071575	tier1	-	-	59	0	0.00	16	35	68.63
CX3CR1	0	genome.wustl.edu	37	3	39307455	39307455	+	Silent	SNP	G	G	C			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	3	39307455	39307455	G	C	SNP	CX3CR1	ENST00000358309	human	ensembl	74_37	-1	known	silent	c.642	p.V214	0.005	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CX3CR1	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CX3CR1,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Duffy_chemokine_rcpt,prints_Chemokine_CXCR4	-	no_errors	CX3CR1	HGNC	ENSG00000168329	tier1	-	-	69	0	0.00	7	25	78.12
FGD6	0	genome.wustl.edu	37	12	95604141	95604141	+	Missense_Mutation	SNP	G	G	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	12	95604141	95604141	G	A	SNP	FGD6	ENST00000343958	human	ensembl	74_37	-1	known	missense	c.919	p.P307S	0.029	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD6	HGNC	ENSG00000180263	tier1	-	-	42	0	0.00	22	24	52.17
RNF165	0	genome.wustl.edu	37	18	44030349	44030349	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	18	44030349	44030349	C	T	SNP	RNF165	ENST00000269439	human	ensembl	74_37	+1	known	missense	c.706	p.R236W	0.990	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF165	HGNC	ENSG00000141622	tier1	-	-	67	0	0.00	34	12	26.09
HGF	0	genome.wustl.edu	37	7	81381428	81381428	+	Nonstop_Mutation	SNP	T	T	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	7	81381428	81381428	T	A	SNP	HGF	ENST00000423064	human	ensembl	74_37	-1	known	nonstop	c.633	p.*211Y	1.000	NULL	pfam_Kringle,pfam_PAN-1_domain,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,pfscan_Pan_app,pfscan_Kringle	-	no_errors	HGF	HGNC	ENSG00000019991	tier1	-	-	48	0	0.00	36	21	36.84
SUPV3L1	0	genome.wustl.edu	37	10	70968805	70968805	+	RNA	DEL	T	T	-			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	10	70968805	70968805	T	-	DEL	SUPV3L1	ENST00000497254	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SUPV3L1	HGNC	ENSG00000156502	tier1			16	0	0.00	31	4	11.43
ZFHX4	0	genome.wustl.edu	37	8	77618128	77618128	+	Missense_Mutation	SNP	G	G	C			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	8	77618128	77618128	G	C	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.1805	p.G602A	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	55	0	0.00	33	23	40.35
ACSL4	0	genome.wustl.edu	37	X	108887384	108887384	+	Missense_Mutation	SNP	C	C	G			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	X	108887384	108887384	C	G	SNP	ACSL4	ENST00000340800	human	ensembl	74_37	-1	known	missense	c.2010	p.K670N	0.999	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL4	HGNC	ENSG00000068366	tier1	-	-	100	0	0.00	57	57	50.00
PCDHB10	0	genome.wustl.edu	37	5	140574170	140574175	+	In_Frame_Del	DEL	AGGCCG	AGGCCG	-			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	AGGCCG	AGGCCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	5	140574170	140574175	AGGCCG	-	DEL	PCDHB10	ENST00000239446	human	ensembl	74_37	+1	known	in_frame_del	c.2045_2050	p.EA684in_frame_del	0.001:0.028:0.066:0.762:0.806:0.823	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB10	HGNC	ENSG00000120324	tier1			NA	NA	NA	NA	NA	NA
LINC00544	0	genome.wustl.edu	37	13	30524474	30524474	+	RNA	SNP	G	G	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	13	30524474	30524474	G	T	SNP	LINC00544	ENST00000380640	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.085	-	-	-	no_errors	LINC00544	HGNC	ENSG00000122043	tier1	-	-	39	0	0.00	45	4	8.16
LOC150051	0	genome.wustl.edu	37	21	32931869	32931870	+	RNA	DEL	GC	GC	-			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	21	32931869	32931870	GC	-	DEL	LOC150051	ENST00000433071	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	AP000251.3	Clone_based_vega_gene	ENSG00000237594	tier1			21	0	0.00	20	3	13.04
CLUH	0	genome.wustl.edu	37	17	2599458	2599458	+	Missense_Mutation	SNP	C	C	G			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	17	2599458	2599458	C	G	SNP	CLUH	ENST00000435359	human	ensembl	74_37	-1	known	missense	c.2269	p.G757R	0.997	NULL	superfamily_GSKIP_dom	-	no_errors	CLUH	HGNC	ENSG00000132361	tier1	-	-	133	0	0.00	73	68	48.23
HCFC1	0	genome.wustl.edu	37	X	153224895	153224895	+	Missense_Mutation	SNP	T	T	C			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	X	153224895	153224895	T	C	SNP	HCFC1	ENST00000310441	human	ensembl	74_37	-1	known	missense	c.1492	p.T498A	0.991	smart_Fibronectin_type3	pfam_Kelch_2,pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	HCFC1	HGNC	ENSG00000172534	tier1	-	-	83	0	0.00	29	44	59.46
RGS12	0	genome.wustl.edu	37	4	3432573	3432573	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	4	3432573	3432573	G	T	SNP	RGS12	ENST00000344733	human	ensembl	74_37	+1	known	missense	c.4005	p.E1335D	0.664	NULL	pfam_Raf-like_ras-bd,pfam_RGS_dom,pfam_PDZ,pfam_GoLoco_motif,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_PTB/PI_dom,smart_Regulat_G_prot_signal_superfam,smart_Raf-like_ras-bd,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_PDZ,pfscan_PTB/PI_dom,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS12	HGNC	ENSG00000159788	tier1	-	-	87	0	0.00	47	31	39.74
PAN2	0	genome.wustl.edu	37	12	56726749	56726749	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	12	56726749	56726749	C	T	SNP	PAN2	ENST00000425394	human	ensembl	74_37	-1	known	missense	c.130	p.V44M	1.000	NULL	pfam_Exonuclease_RNaseT/DNA_pol3,pfam_Peptidase_C19/C67,superfamily_RNaseH-like_dom,superfamily_WD40_repeat_dom,smart_Exonuclease,pfscan_Peptidase_C19/C67	-	no_errors	PAN2	HGNC	ENSG00000135473	tier1	-	-	38	0	0.00	18	18	50.00
MAGEA11	0	genome.wustl.edu	37	X	148797280	148797280	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	X	148797280	148797280	C	T	SNP	MAGEA11	ENST00000355220	human	ensembl	74_37	+1	known	missense	c.209	p.A70V	0.002	NULL	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA11	HGNC	ENSG00000185247	tier1	-	-	37	0	0.00	30	22	42.31
AHNAK2	0	genome.wustl.edu	37	14	105414679	105414679	+	Missense_Mutation	SNP	G	G	C			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	14	105414679	105414679	G	C	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.7109	p.P2370R	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	tier1	-	-	123	0	0.00	43	40	48.19
MTMR14	0	genome.wustl.edu	37	3	9719070	9719070	+	Missense_Mutation	SNP	A	A	G			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	3	9719070	9719070	A	G	SNP	MTMR14	ENST00000296003	human	ensembl	74_37	+1	known	missense	c.821	p.Q274R	1.000	NULL	NULL	-	no_errors	MTMR14	HGNC	ENSG00000163719	tier1	-	-	51	0	0.00	5	19	79.17
ZNF91	0	genome.wustl.edu	37	19	23541628	23541628	+	RNA	SNP	T	T	C			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	19	23541628	23541628	T	C	SNP	ZNF91	ENST00000593341	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF91	HGNC	ENSG00000167232	tier1	-	-	18	0	0.00	7	7	50.00
LRRC34	0	genome.wustl.edu	37	3	169530222	169530222	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	3	169530222	169530222	C	A	SNP	LRRC34	ENST00000446859	human	ensembl	74_37	-1	known	missense	c.115	p.G39C	0.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC34	HGNC	ENSG00000171757	tier1	-	-	9	0	0.00	6	5	45.45
LINC00898	0	genome.wustl.edu	37	22	48021185	48021185	+	RNA	SNP	A	A	G			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	22	48021185	48021185	A	G	SNP	LINC00898	ENST00000380990	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00898	HGNC	ENSG00000205634	tier1	-	-	53	0	0.00	25	22	46.81
SLC43A2	0	genome.wustl.edu	37	17	1516506	1516506	+	Missense_Mutation	SNP	T	T	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	17	1516506	1516506	T	A	SNP	SLC43A2	ENST00000382147	human	ensembl	74_37	-1	known	missense	c.484	p.T162S	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC43A2	HGNC	ENSG00000167703	tier1	-	-	26	0	0.00	20	15	42.86
ZFP57	0	genome.wustl.edu	37	6	29643198	29643198	+	Missense_Mutation	SNP	T	T	C			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	6	29643198	29643198	T	C	SNP	ZFP57	ENST00000488757	human	ensembl	74_37	-1	known	missense	c.317	p.E106G	0.000	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP57	HGNC	ENSG00000204644	tier1	-	-	62	0	0.00	37	36	49.32
LRRN3	0	genome.wustl.edu	37	7	110762867	110762867	+	Silent	SNP	C	C	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	7	110762867	110762867	C	T	SNP	LRRN3	ENST00000308478	human	ensembl	74_37	+1	known	silent	c.39	p.G13	1.000	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRRN3	HGNC	ENSG00000173114	tier1	-	-	51	0	0.00	43	4	8.51
MCL1	0	genome.wustl.edu	37	1	150551644	150551644	+	Silent	SNP	C	C	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	1	150551644	150551644	C	A	SNP	MCL1	ENST00000369026	human	ensembl	74_37	-1	known	silent	c.363	p.S121	0.714	NULL	pfam_Blc2_fam,pfscan_Bcl2-like,prints_Apop_reg_Mc1,prints_Blc2_fam	-	no_errors	MCL1	HGNC	ENSG00000143384	tier1	-	-	37	0	0.00	18	19	51.35
PKD2	0	genome.wustl.edu	37	4	88929174	88929176	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	4	88929174	88929176	GAG	-	DEL	PKD2	ENST00000237596	human	ensembl	74_37	+1	known	in_frame_del	c.289_291	p.E100in_frame_del	1.000:1.000:1.000	NULL	pfam_PKD1_2_channel,pfam_Ion_trans_dom,pfscan_EF_hand_dom,prints_PKD_2,prints_PKD_1	-	no_errors	PKD2	HGNC	ENSG00000118762	tier1			33	0	0.00	37	4	9.76
ANXA1	0	genome.wustl.edu	37	9	75783797	75783798	+	RNA	DEL	GT	GT	-			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	9	75783797	75783798	GT	-	DEL	ANXA1	ENST00000491192	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.004	-	-	-	no_errors	ANXA1	HGNC	ENSG00000135046	tier1			15	0	0.00	14	3	17.65
SPATA6L	0	genome.wustl.edu	37	9	4625444	4625444	+	Silent	SNP	G	G	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	9	4625444	4625444	G	A	SNP	SPATA6L	ENST00000454239	human	ensembl	74_37	-1	known	silent	c.552	p.A184	0.000	NULL	NULL	-	no_errors	SPATA6L	HGNC	ENSG00000106686	tier1	-	-	47	0	0.00	31	34	52.31
RIOK3	0	genome.wustl.edu	37	18	21044211	21044211	+	Nonsense_Mutation	SNP	G	G	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	18	21044211	21044211	G	T	SNP	RIOK3	ENST00000339486	human	ensembl	74_37	+1	known	nonsense	c.367	p.E123*	1.000	pirsf_Ser/Thr_kinase_Rio3	pfam_RIO-like_kinase,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_RIO_kinase,pirsf_Ser/Thr_kinase_Rio3	-	no_errors	RIOK3	HGNC	ENSG00000101782	tier1	-	-	33	0	0.00	41	4	8.89
BEND3	0	genome.wustl.edu	37	6	107391548	107391548	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	6	107391548	107391548	C	A	SNP	BEND3	ENST00000369042	human	ensembl	74_37	-1	known	missense	c.847	p.D283Y	1.000	pfam_BEN_domain	pfam_BEN_domain	-	no_errors	BEND3	HGNC	ENSG00000178409	tier1	-	-	70	0	0.00	32	31	49.21
CCDC30	0	genome.wustl.edu	37	1	43002200	43002201	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	1	43002200	43002201	AG	-	DEL	CCDC30	ENST00000340612	human	ensembl	74_37	+1	known	frame_shift_del	c.45_46	p.R19fs	1.000:0.998	NULL	NULL	-	no_errors	CCDC30	HGNC	ENSG00000186409	tier1			50	0	0.00	36	4	10.00
STK25	0	genome.wustl.edu	37	2	242435082	242435082	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	2	242435082	242435082	G	T	SNP	STK25	ENST00000316586	human	ensembl	74_37	-1	known	missense	c.1276	p.R426S	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	STK25	HGNC	ENSG00000115694	tier1	-	-	36	0	0.00	46	4	8.00
SIPA1L1	0	genome.wustl.edu	37	14	72190515	72190515	+	Missense_Mutation	SNP	C	C	G			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	14	72190515	72190515	C	G	SNP	SIPA1L1	ENST00000555818	human	ensembl	74_37	+1	known	missense	c.4423	p.P1475A	1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L1	HGNC	ENSG00000197555	tier1	-	-	51	0	0.00	35	19	35.19
DOK2	0	genome.wustl.edu	37	8	21769858	21769858	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	8	21769858	21769858	C	T	SNP	DOK2	ENST00000276420	human	ensembl	74_37	-1	known	missense	c.227	p.S76N	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	DOK2	HGNC	ENSG00000147443	tier1	-	-	25	0	0.00	12	9	42.86
SLC34A1	0	genome.wustl.edu	37	5	176825332	176825332	+	RNA	SNP	G	G	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	5	176825332	176825332	G	T	SNP	SLC34A1	ENST00000513614	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC34A1	HGNC	ENSG00000131183	tier1	-	-	51	0	0.00	24	27	52.94
SLC25A14	0	genome.wustl.edu	37	X	129492767	129492768	+	RNA	INS	-	-	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	X	129492767	129492768	-	T	INS	SLC25A14	ENST00000464184	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	SLC25A14	HGNC	ENSG00000102078	tier1			34	0	0.00	30	3	9.09
ACP6	0	genome.wustl.edu	37	1	147119311	147119311	+	Missense_Mutation	SNP	C	C	G			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	1	147119311	147119311	C	G	SNP	ACP6	ENST00000369238	human	ensembl	74_37	-1	known	missense	c.1201	p.A401P	0.013	NULL	pfam_His_Pase_superF_clade-2	-	no_errors	ACP6	HGNC	ENSG00000162836	tier1	-	-	55	0	0.00	29	29	49.15
ENSG00000226849	0	genome.wustl.edu	37	1	11131107	11131107	+	RNA	SNP	C	C	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	1	11131107	11131107	C	A	SNP	ENSG00000226849	ENST00000452378	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP4-635E18.7	Clone_based_vega_gene	ENSG00000226849	tier1	-	-	25	0	0.00	4	19	82.61
PDE4A	0	genome.wustl.edu	37	19	10561315	10561315	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	19	10561315	10561315	G	T	SNP	PDE4A	ENST00000352831	human	ensembl	74_37	+1	known	missense	c.657	p.K219N	1.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE4A	HGNC	ENSG00000065989	tier1	-	-	56	0	0.00	34	24	41.38
WASH6P	0	genome.wustl.edu	37	X	155254556	155254556	+	RNA	SNP	C	C	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	X	155254556	155254556	C	T	SNP	WASH6P	ENST00000461007	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	WASH6P	HGNC	ENSG00000182484	tier1	-	-	11	0	0.00	12	7	36.84
AOC3	0	genome.wustl.edu	37	17	41008501	41008501	+	Silent	SNP	G	G	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	17	41008501	41008501	G	A	SNP	AOC3	ENST00000308423	human	ensembl	74_37	+1	known	silent	c.2226	p.L742	0.000	superfamily_Cu_amine_oxidase_C	pfam_Cu_amine_oxidase_C,pfam_Cu_amine_oxidase_N2,pfam_Cu_amine_oxidase_N3,superfamily_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_N-reg,prints_Cu_amine_oxidase	-	no_errors	AOC3	HGNC	ENSG00000131471	tier1	-	-	64	0	0.00	33	27	45.00
ABCA17P	0	genome.wustl.edu	37	16	2415783	2415783	+	RNA	SNP	G	G	C			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	16	2415783	2415783	G	C	SNP	ABCA17P	ENST00000469908	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ABCA17P	HGNC	ENSG00000238098	tier1	-	-	38	0	0.00	24	28	53.85
ALDH1L1	0	genome.wustl.edu	37	3	125876260	125876260	+	Missense_Mutation	SNP	A	A	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	3	125876260	125876260	A	T	SNP	ALDH1L1	ENST00000393434	human	ensembl	74_37	-1	known	missense	c.454	p.C152S	1.000	pfam_Formyl_transf_N,superfamily_Formyl_transf_N,pirsf_10_FTHF_DH	pfam_Aldehyde_DH_dom,pfam_Formyl_transf_N,pfam_Formyl_trans_C,pfam_Acyl_carrier_prot-like,superfamily_Ald_DH/histidinol_DH,superfamily_Formyl_transf_N,superfamily_Formyl_transferase_C-like,superfamily_Acyl_carrier_prot-like,pirsf_10_FTHF_DH,pfscan_Acyl_carrier_prot-like	-	no_errors	ALDH1L1	HGNC	ENSG00000144908	tier1	-	-	33	0	0.00	22	23	51.11
BAZ1B	0	genome.wustl.edu	37	7	72892896	72892896	+	Missense_Mutation	SNP	T	T	C			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	7	72892896	72892896	T	C	SNP	BAZ1B	ENST00000339594	human	ensembl	74_37	-1	known	missense	c.895	p.M299V	0.993	NULL	pfam_WSTF_Acf1_Cbp146,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,superfamily_ARM-type_fold,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_WSTF_Acf1_Cbp146,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ1B	HGNC	ENSG00000009954	tier1	-	-	52	0	0.00	36	28	43.75
FAM129A	0	genome.wustl.edu	37	1	184767242	184767242	+	Missense_Mutation	SNP	T	T	C			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	1	184767242	184767242	T	C	SNP	FAM129A	ENST00000367511	human	ensembl	74_37	-1	known	missense	c.1637	p.H546R	0.941	NULL	NULL	-	no_errors	FAM129A	HGNC	ENSG00000135842	tier1	-	-	47	0	0.00	20	22	52.38
JAG1	0	genome.wustl.edu	37	20	10625797	10625797	+	Missense_Mutation	SNP	T	T	G			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	20	10625797	10625797	T	G	SNP	JAG1	ENST00000254958	human	ensembl	74_37	-1	known	missense	c.2221	p.N741H	1.000	smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	JAG1	HGNC	ENSG00000101384	tier1	-	-	43	0	0.00	24	25	51.02
LOC101927417	0	genome.wustl.edu	37	1	15654737	15654738	+	RNA	INS	-	-	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	1	15654737	15654738	-	T	INS	LOC101927417	ENST00000428747	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.002	-	-	-	no_errors	RP3-467K16.2	Clone_based_vega_gene	ENSG00000233485	tier1			19	0	0.00	9	4	30.77
DAAM1	0	genome.wustl.edu	37	14	59835718	59835718	+	RNA	SNP	A	A	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	14	59835718	59835718	A	T	SNP	DAAM1	ENST00000553966	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.957	-	-	-	no_errors	DAAM1	HGNC	ENSG00000100592	tier1	-	-	41	0	0.00	28	21	42.86
ITGB8	0	genome.wustl.edu	37	7	20420428	20420428	+	Frame_Shift_Del	DEL	G	G	-			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	7	20420428	20420428	G	-	DEL	ITGB8	ENST00000222573	human	ensembl	74_37	+1	known	frame_shift_del	c.775	p.A259fs	1.000	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,smart_Integrin_bsu_N,prints_Integrin_bsu	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_EGF_extracell,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB8	HGNC	ENSG00000105855	tier1			39	0	0.00	29	21	42.00
MYH4	0	genome.wustl.edu	37	17	10357193	10357193	+	Missense_Mutation	SNP	C	C	G			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	17	10357193	10357193	C	G	SNP	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	missense	c.2701	p.A901P	0.899	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424	tier1	-	-	69	0	0.00	63	37	37.00
LINGO1	0	genome.wustl.edu	37	15	77908078	77908078	+	Silent	SNP	G	G	A			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	15	77908078	77908078	G	A	SNP	LINGO1	ENST00000355300	human	ensembl	74_37	-1	known	silent	c.171	p.C57	1.000	smart_LRR-contain_N	pfam_Leu-rich_rpt,pfam_Ig_I-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LINGO1	HGNC	ENSG00000169783	tier1	-	-	25	0	0.00	25	4	13.79
TSKU	0	genome.wustl.edu	37	11	76507673	76507673	+	Missense_Mutation	SNP	A	A	G			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	11	76507673	76507673	A	G	SNP	TSKU	ENST00000333090	human	ensembl	74_37	+1	known	missense	c.1013	p.H338R	0.999	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	TSKU	HGNC	ENSG00000182704	tier1	-	-	56	0	0.00	24	27	52.94
PPP2R5E	0	genome.wustl.edu	37	14	64010052	64010052	+	RNA	SNP	C	C	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	14	64010052	64010052	C	T	SNP	PPP2R5E	ENST00000553266	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PPP2R5E	HGNC	ENSG00000154001	tier1	-	-	23	0	0.00	15	6	28.57
HYDIN	0	genome.wustl.edu	37	16	71220807	71220808	+	Frame_Shift_Ins	INS	-	-	T			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	16	71220807	71220808	-	T	INS	HYDIN	ENST00000538248	human	ensembl	74_37	-1	known	frame_shift_ins	c.73_72	p.L24fs	0.140:0.169	NULL	superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1			44	0	0.00	42	6	12.50
ENSG00000204792	0	genome.wustl.edu	37	2	75157532	75157532	+	RNA	SNP	C	C	G			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	2	75157532	75157532	C	G	SNP	ENSG00000204792	ENST00000377469	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.984	-	-	-	no_errors	AC104135.3	Clone_based_vega_gene	ENSG00000204792	tier1	-	-	47	0	0.00	14	15	51.72
PDZD2	0	genome.wustl.edu	37	5	32087892	32087892	+	Frame_Shift_Del	DEL	G	G	-			TCGA-WK-A8XT-01A-11D-A37C-09	TCGA-WK-A8XT-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	77c2c8cd-1275-4cb5-84f4-753622c380d2	9664ca55-37f1-47af-a918-25eba2554c04	5	32087892	32087892	G	-	DEL	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	frame_shift_del	c.4338	p.D1448fs	0.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	tier1			65	0	0.00	42	34	44.74
