Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
PRKDC	0	genome.wustl.edu	37	8	48866457	48866457	+	Silent	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	8	48866457	48866457	G	A	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	silent	c.531	p.L177	0.879	superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1	-	-	14	0	0.00	7	11	61.11
SMARCAL1	0	genome.wustl.edu	37	2	217332668	217332668	+	Nonsense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	2	217332668	217332668	G	T	SNP	SMARCAL1	ENST00000357276	human	ensembl	74_37	+1	known	nonsense	c.2143	p.E715*	1.000	superfamily_P-loop_NTPase	pfam_HARP_dom,pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCAL1	HGNC	ENSG00000138375	tier1	-	-	17	0	0.00	5	4	44.44
TNPO3	0	genome.wustl.edu	37	7	128655088	128655088	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	128655088	128655088	C	T	SNP	TNPO3	ENST00000393245	human	ensembl	74_37	-1	known	missense	c.497	p.R166H	0.999	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	-	no_errors	TNPO3	HGNC	ENSG00000064419	tier1	-	-	31	0	0.00	25	4	13.79
MYH2	0	genome.wustl.edu	37	17	10436721	10436721	+	Silent	SNP	A	A	G			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	17	10436721	10436721	A	G	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	silent	c.2322	p.G774	1.000	superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414	tier1	-	-	41	0	0.00	17	13	43.33
PLEK	0	genome.wustl.edu	37	2	68620322	68620322	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	2	68620322	68620322	G	T	SNP	PLEK	ENST00000234313	human	ensembl	74_37	+1	known	missense	c.791	p.R264M	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,pfam_DEP_dom,smart_Pleckstrin_homology,smart_DEP_dom,pfscan_DEP_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEK	HGNC	ENSG00000115956	tier1	-	-	41	0	0.00	20	4	16.67
MAGEC1	0	genome.wustl.edu	37	X	140996552	140996552	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	X	140996552	140996552	C	T	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	missense	c.3362	p.T1121I	0.002	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495	tier1	-	-	22	0	0.00	10	3	23.08
GNPTAB	0	genome.wustl.edu	37	12	102155456	102155456	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	12	102155456	102155456	G	T	SNP	GNPTAB	ENST00000299314	human	ensembl	74_37	-1	known	missense	c.2801	p.S934Y	1.000	NULL	pfam_DMAP1-bd,pfam_Notch_dom,pfam_DUF3184,superfamily_Notch_dom,smart_Notch_dom,pfscan_EF_hand_dom,pfscan_Notch_dom	-	no_errors	GNPTAB	HGNC	ENSG00000111670	tier1	-	-	34	0	0.00	26	4	13.33
ZNF629	0	genome.wustl.edu	37	16	30794309	30794309	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	16	30794309	30794309	C	T	SNP	ZNF629	ENST00000262525	human	ensembl	74_37	-1	known	missense	c.1340	p.R447H	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF629	HGNC	ENSG00000102870	tier1	-	-	52	0	0.00	38	6	13.64
NFATC1	0	genome.wustl.edu	37	18	77170842	77170842	+	Silent	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	18	77170842	77170842	C	T	SNP	NFATC1	ENST00000427363	human	ensembl	74_37	+1	known	silent	c.567	p.Y189	0.595	NULL	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC1	HGNC	ENSG00000131196	tier1	rs140225213	GMAF=0.0005	30	0	0.00	38	5	11.63
RBBP6	0	genome.wustl.edu	37	16	24583338	24583338	+	Missense_Mutation	SNP	T	T	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	16	24583338	24583338	T	A	SNP	RBBP6	ENST00000319715	human	ensembl	74_37	+1	known	missense	c.4951	p.S1651T	0.998	NULL	pfam_DWNN_domain,pfam_Ubox_domain,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_CCHC	-	no_errors	RBBP6	HGNC	ENSG00000122257	tier1	-	-	18	0	0.00	10	6	37.50
PIWIL1	0	genome.wustl.edu	37	12	130831551	130831551	+	Silent	SNP	T	T	C			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	12	130831551	130831551	T	C	SNP	PIWIL1	ENST00000245255	human	ensembl	74_37	+1	known	silent	c.597	p.N199	0.999	superfamily_PAZ_dom	pfam_Piwi,pfam_PAZ_dom,pfam_GAGE,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	PIWIL1	HGNC	ENSG00000125207	tier1	-	-	35	0	0.00	32	4	11.11
HPSE2	0	genome.wustl.edu	37	10	100401673	100401673	+	Silent	SNP	G	G	C			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	10	100401673	100401673	G	C	SNP	HPSE2	ENST00000370552	human	ensembl	74_37	-1	known	silent	c.1029	p.V343	1.000	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	-	no_errors	HPSE2	HGNC	ENSG00000172987	tier1	-	-	31	0	0.00	50	5	9.09
KIAA1958	0	genome.wustl.edu	37	9	115337138	115337138	+	Missense_Mutation	SNP	A	A	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	9	115337138	115337138	A	T	SNP	KIAA1958	ENST00000536272	human	ensembl	74_37	+1	known	missense	c.778	p.I260F	0.998	NULL	pfam_DUF3504,superfamily_Integrase_Lambda-type_N	-	no_errors	KIAA1958	HGNC	ENSG00000165185	tier1	-	-	13	0	0.00	4	6	60.00
MET	0	genome.wustl.edu	37	7	116397813	116397813	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	116397813	116397813	C	T	SNP	MET	ENST00000318493	human	ensembl	74_37	+1	known	missense	c.2087	p.T696I	1.000	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_IPT,superfamily_Ig_E-set,smart_IPT	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Kinase-like_dom,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Semap_dom,pfscan_Prot_kinase_dom	-	no_errors	MET	HGNC	ENSG00000105976	tier1	-	-	47	0	0.00	27	9	25.00
CAPN5	0	genome.wustl.edu	37	11	76823688	76823688	+	Silent	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	11	76823688	76823688	C	T	SNP	CAPN5	ENST00000278559	human	ensembl	74_37	+1	known	silent	c.351	p.Y117	0.020	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,pfam_C2_dom,superfamily_Calpain_domain_III,superfamily_C2_dom,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_C2_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN5	HGNC	ENSG00000149260	tier1	-	-	21	0	0.00	23	4	14.81
ENSG00000230615	0	genome.wustl.edu	37	1	44569973	44569974	+	RNA	INS	-	-	TCTCCTGGCCCAGAGTCTCCAGCTGCCGCCGCT			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	44569973	44569974	-	TCTCCTGGCCCAGAGTCTCCAGCTGCCGCCGCT	INS	ENSG00000230615	ENST00000434244	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	RP5-1198O20.4	Clone_based_vega_gene	ENSG00000230615	tier1			NA	NA	NA	NA	NA	NA
SPINK5	0	genome.wustl.edu	37	5	147499875	147499875	+	Frame_Shift_Del	DEL	A	A	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	5	147499875	147499875	A	-	DEL	SPINK5	ENST00000359874	human	ensembl	74_37	+1	known	frame_shift_del	c.2459	p.K823fs	0.998	pfam_Kazal_dom,smart_Kazal_dom	pfam_Kazal_dom,smart_Kazal_dom	-	no_errors	SPINK5	HGNC	ENSG00000133710	tier1			30	0	0.00	28	3	9.68
CYP11B2	0	genome.wustl.edu	37	8	143994116	143994116	+	Silent	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	8	143994116	143994116	G	A	SNP	CYP11B2	ENST00000323110	human	ensembl	74_37	-1	known	silent	c.1228	p.L410	0.893	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP11B2	HGNC	ENSG00000179142	tier1	-	-	56	0	0.00	66	12	15.38
LGI4	0	genome.wustl.edu	37	19	35617801	35617801	+	Nonsense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	19	35617801	35617801	C	T	SNP	LGI4	ENST00000310123	human	ensembl	74_37	-1	known	nonsense	c.749	p.W250*	1.000	pfam_EPTP,pfscan_EAR	pfam_EPTP,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_EAR	-	no_errors	LGI4	HGNC	ENSG00000153902	tier1	-	-	31	0	0.00	56	5	8.20
ABCA6	0	genome.wustl.edu	37	17	67094140	67094140	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	17	67094140	67094140	G	T	SNP	ABCA6	ENST00000284425	human	ensembl	74_37	-1	known	missense	c.3041	p.P1014Q	0.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA6	HGNC	ENSG00000154262	tier1	-	-	32	0	0.00	39	4	9.30
HPS6	0	genome.wustl.edu	37	10	103826184	103826184	+	Missense_Mutation	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	10	103826184	103826184	G	A	SNP	HPS6	ENST00000299238	human	ensembl	74_37	+1	known	missense	c.953	p.G318D	0.964	pirsf_BLOC-2_complex_Hps6_subunit	pirsf_BLOC-2_complex_Hps6_subunit	-	no_errors	HPS6	HGNC	ENSG00000166189	tier1	-	-	25	0	0.00	34	4	10.53
PADI1	0	genome.wustl.edu	37	1	17567091	17567100	+	RNA	DEL	CTTCCTAGTC	CTTCCTAGTC	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	CTTCCTAGTC	CTTCCTAGTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	17567091	17567100	CTTCCTAGTC	-	DEL	PADI1	ENST00000460293	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010:0.001:0.000:0.002:0.002:0.000:0.000:0.000:0.000:0.000	-	-	-	no_errors	PADI1	HGNC	ENSG00000142623	tier1			NA	NA	NA	NA	NA	NA
EDF1	0	genome.wustl.edu	37	9	139760677	139760677	+	Silent	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	9	139760677	139760677	G	A	SNP	EDF1	ENST00000224073	human	ensembl	74_37	-1	known	silent	c.34	p.L12	1.000	pfam_MBF1_N	pfam_MBF1_N,pfam_Cro/C1-type_HTH,superfamily_Lambda_DNA-bd_dom,smart_Cro/C1-type_HTH,pfscan_Cro/C1-type_HTH	-	no_errors	EDF1	HGNC	ENSG00000107223	tier1	-	-	54	0	0.00	18	17	48.57
LOC101928729	0	genome.wustl.edu	37	17	18291433	18291438	+	RNA	DEL	CACAGC	CACAGC	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	CACAGC	CACAGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	17	18291433	18291438	CACAGC	-	DEL	LOC101928729	ENST00000579352	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.100:0.098:0.095:0.091:0.087:0.081	-	-	-	no_errors	RP1-37N7.1	Clone_based_vega_gene	ENSG00000264177	tier1			NA	NA	NA	NA	NA	NA
DSPP	0	genome.wustl.edu	37	4	88534993	88534993	+	Silent	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	4	88534993	88534993	G	T	SNP	DSPP	ENST00000282478	human	ensembl	74_37	+1	known	silent	c.1179	p.G393	0.790	NULL	NULL	-	no_errors	DSPP	HGNC	ENSG00000152591	tier1	-	-	24	0	0.00	21	4	16.00
KDM5D	0	genome.wustl.edu	37	Y	21877620	21877620	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	Y	21877620	21877620	C	T	SNP	KDM5D	ENST00000541639	human	ensembl	74_37	-1	known	missense	c.2312	p.R771Q	1.000	pfam_Znf_C5HC2	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_Znf_PHD-finger,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5D	HGNC	ENSG00000012817	tier1	-	-	12	0	0.00	14	4	22.22
ZFYVE9	0	genome.wustl.edu	37	1	52744179	52744179	+	Missense_Mutation	SNP	A	A	G			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	52744179	52744179	A	G	SNP	ZFYVE9	ENST00000287727	human	ensembl	74_37	+1	known	missense	c.2762	p.E921G	1.000	pirsf_Znf_FYVE_SARA/endofin	pfam_DUF3480,pfam_SARA_Smad-bd,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pirsf_Znf_FYVE_SARA/endofin,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE9	HGNC	ENSG00000157077	tier1	-	-	35	0	0.00	35	31	46.97
CNTNAP1	0	genome.wustl.edu	37	17	40840498	40840498	+	Missense_Mutation	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	17	40840498	40840498	G	A	SNP	CNTNAP1	ENST00000264638	human	ensembl	74_37	+1	known	missense	c.1325	p.G442D	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP1	HGNC	ENSG00000108797	tier1	-	-	33	0	0.00	29	4	12.12
PIAS1	0	genome.wustl.edu	37	15	68468089	68468089	+	Frame_Shift_Del	DEL	T	T	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	15	68468089	68468089	T	-	DEL	PIAS1	ENST00000249636	human	ensembl	74_37	+1	known	frame_shift_del	c.1284	p.Y429fs	0.985	NULL	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS1	HGNC	ENSG00000033800	tier1			39	0	0.00	23	11	32.35
HIVEP2	0	genome.wustl.edu	37	6	143092861	143092861	+	Silent	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	6	143092861	143092861	C	T	SNP	HIVEP2	ENST00000012134	human	ensembl	74_37	-1	known	silent	c.3015	p.E1005	1.000	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP2	HGNC	ENSG00000010818	tier1	-	-	21	0	0.00	24	4	14.29
MMRN1	0	genome.wustl.edu	37	4	90857825	90857825	+	Silent	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	4	90857825	90857825	C	T	SNP	MMRN1	ENST00000264790	human	ensembl	74_37	+1	known	silent	c.2994	p.V998	0.915	NULL	pfam_C1q,pfam_EMI_domain,pfam_EG-like_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C1q,prints_C1q,pfscan_C1q,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MMRN1	HGNC	ENSG00000138722	tier1	-	-	38	0	0.00	40	4	9.09
GPRC6A	0	genome.wustl.edu	37	6	117114310	117114310	+	Silent	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	6	117114310	117114310	G	T	SNP	GPRC6A	ENST00000310357	human	ensembl	74_37	-1	known	silent	c.1776	p.S592	0.339	NULL	pfam_GPCR_3_C,pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_vmron_rcpt_2	-	no_errors	GPRC6A	HGNC	ENSG00000173612	tier1	-	-	24	0	0.00	14	3	17.65
C2orf16	0	genome.wustl.edu	37	2	27802045	27802045	+	Missense_Mutation	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	2	27802045	27802045	G	A	SNP	C2orf16	ENST00000408964	human	ensembl	74_37	+1	known	missense	c.2606	p.G869D	0.179	NULL	NULL	-	no_errors	C2orf16	HGNC	ENSG00000221843	tier1	-	-	23	0	0.00	11	3	21.43
EP400	0	genome.wustl.edu	37	12	132522547	132522547	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	12	132522547	132522547	G	T	SNP	EP400	ENST00000333577	human	ensembl	74_37	+1	known	missense	c.6221	p.G2074V	1.000	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495	tier1	-	-	37	0	0.00	35	4	10.26
ENSG00000272849	0	genome.wustl.edu	37	12	122235514	122235514	+	RNA	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	12	122235514	122235514	G	T	SNP	ENSG00000272849	ENST00000609067	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-347I19.8	Clone_based_vega_gene	ENSG00000272849	tier1	-	-	37	0	0.00	29	4	12.12
TMEM82	0	genome.wustl.edu	37	1	16073516	16073516	+	Silent	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	16073516	16073516	C	T	SNP	TMEM82	ENST00000375782	human	ensembl	74_37	+1	known	silent	c.912	p.G304	0.000	NULL	NULL	-	no_errors	TMEM82	HGNC	ENSG00000162460	tier1	rs150729040	-	31	0	0.00	34	4	10.53
COL23A1	0	genome.wustl.edu	37	5	177683352	177683352	+	Splice_Site	SNP	A	A	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	5	177683352	177683352	A	T	SNP	COL23A1	ENST00000390654	human	ensembl	74_37	-1	known	splice_site	c.882+2	e15+2	1.000	-	-	-	no_errors	COL23A1	HGNC	ENSG00000050767	tier1	-	-	48	0	0.00	57	26	31.33
TNFSF10	0	genome.wustl.edu	37	3	172224433	172224433	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	3	172224433	172224433	G	T	SNP	TNFSF10	ENST00000241261	human	ensembl	74_37	-1	known	missense	c.695	p.S232Y	1.000	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pirsf_TNF_ligand_10/11,pfscan_TNF_dom	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pirsf_TNF_ligand_10/11,pfscan_TNF_dom	-	no_errors	TNFSF10	HGNC	ENSG00000121858	tier1	-	-	45	0	0.00	44	4	8.33
CNR1	0	genome.wustl.edu	37	6	88854252	88854252	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	6	88854252	88854252	C	A	SNP	CNR1	ENST00000369499	human	ensembl	74_37	-1	known	missense	c.742	p.A248S	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pirsf_Canbinoid_rcpt_1,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pirsf_Canbinoid_rcpt_1,pfscan_GPCR_Rhodpsn_7TM,prints_Canbinoid_rcpt_1,prints_Cnbnoid_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CNR1	HGNC	ENSG00000118432	tier1	-	-	8	0	0.00	6	7	53.85
WNK1	0	genome.wustl.edu	37	12	988968	988968	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	12	988968	988968	G	T	SNP	WNK1	ENST00000530271	human	ensembl	74_37	+1	known	missense	c.4097	p.G1366V	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK1	HGNC	ENSG00000060237	tier1	-	-	30	0	0.00	8	3	27.27
EDNRB	0	genome.wustl.edu	37	13	78492295	78492295	+	Silent	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	13	78492295	78492295	G	T	SNP	EDNRB	ENST00000334286	human	ensembl	74_37	-1	known	silent	c.414	p.I138	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_ETB_rcpt,prints_Endthln_rcpt,prints_GPCR_Rhodpsn,prints_Bombsn_rcpt	-	no_errors	EDNRB	HGNC	ENSG00000136160	tier1	-	-	43	0	0.00	35	4	10.26
IRF2BPL	0	genome.wustl.edu	37	14	77493792	77493794	+	In_Frame_Del	DEL	TGT	TGT	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	TGT	TGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	14	77493792	77493794	TGT	-	DEL	IRF2BPL	ENST00000238647	human	ensembl	74_37	-1	known	in_frame_del	c.344_342	p.Q118in_frame_del	0.050:0.052:0.060	pfam_Interferon_reg_fac2-bd1_2_Znf	pfam_Interferon_reg_fac2-bd1_2_Znf	-	no_errors	IRF2BPL	HGNC	ENSG00000119669	tier1			8	0	0.00	7	5	41.67
OR10H1	0	genome.wustl.edu	37	19	15918238	15918238	+	Missense_Mutation	SNP	A	A	C			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	19	15918238	15918238	A	C	SNP	OR10H1	ENST00000334920	human	ensembl	74_37	-1	known	missense	c.610	p.C204G	0.995	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10H1	HGNC	ENSG00000186723	tier1	rs144349437	-	55	0	0.00	70	8	10.26
WDR59	0	genome.wustl.edu	37	16	74976691	74976691	+	Frame_Shift_Del	DEL	T	T	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	16	74976691	74976691	T	-	DEL	WDR59	ENST00000262144	human	ensembl	74_37	-1	known	frame_shift_del	c.479	p.N160fs	0.999	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_UBQ-conjugating_enzyme/RWD,smart_WD40_repeat,smart_RWD-domain,pfscan_RWD-domain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR59	HGNC	ENSG00000103091	tier1			25	0	0.00	22	4	15.38
IL2RB	0	genome.wustl.edu	37	22	37524543	37524543	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	22	37524543	37524543	C	T	SNP	IL2RB	ENST00000216223	human	ensembl	74_37	-1	known	missense	c.1249	p.A417T	0.086	NULL	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL2RB	HGNC	ENSG00000100385	tier1	-	-	29	0	0.00	11	9	45.00
WDR65	0	genome.wustl.edu	37	1	43650876	43650876	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	43650876	43650876	C	T	SNP	WDR65	ENST00000528956	human	ensembl	74_37	+1	known	missense	c.818	p.A273V	0.000	superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR65	HGNC	ENSG00000243710	tier1	-	-	39	0	0.00	40	7	14.89
DLGAP2	0	genome.wustl.edu	37	8	1626652	1626652	+	Missense_Mutation	SNP	A	A	C			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	8	1626652	1626652	A	C	SNP	DLGAP2	ENST00000421627	human	ensembl	74_37	+1	known	missense	c.2321	p.D774A	0.880	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP2	HGNC	ENSG00000198010	tier1	-	-	54	0	0.00	46	11	19.30
EVX1	0	genome.wustl.edu	37	7	27282704	27282704	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	27282704	27282704	C	A	SNP	EVX1	ENST00000496902	human	ensembl	74_37	+1	known	missense	c.55	p.L19M	0.998	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	EVX1	HGNC	ENSG00000106038	tier1	-	-	52	0	0.00	46	4	8.00
PCNXL2	0	genome.wustl.edu	37	1	233121872	233121872	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	233121872	233121872	C	T	SNP	PCNXL2	ENST00000258229	human	ensembl	74_37	-1	known	missense	c.6206	p.G2069D	1.000	NULL	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	-	no_errors	PCNXL2	HGNC	ENSG00000135749	tier1	-	-	35	0	0.00	25	10	28.57
RBFOX1	0	genome.wustl.edu	37	16	7568226	7568226	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	16	7568226	7568226	C	A	SNP	RBFOX1	ENST00000547372	human	ensembl	74_37	+1	known	missense	c.234	p.N78K	1.000	pirsf_RNA-bd_Fox-1	pfam_Fox-1_C_dom,pfam_RRM_dom,smart_RRM_dom,pirsf_RNA-bd_Fox-1,pfscan_RRM_dom	-	no_errors	RBFOX1	HGNC	ENSG00000078328	tier1	-	-	33	0	0.00	8	10	55.56
PCDHB1	0	genome.wustl.edu	37	5	140433279	140433279	+	Missense_Mutation	SNP	C	C	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	5	140433279	140433279	C	A	SNP	PCDHB1	ENST00000306549	human	ensembl	74_37	+1	known	missense	c.2224	p.Q742K	0.056	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB1	HGNC	ENSG00000171815	tier1	-	-	26	0	0.00	9	11	55.00
RNASE8	0	genome.wustl.edu	37	14	21526107	21526107	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	14	21526107	21526107	G	T	SNP	RNASE8	ENST00000308227	human	ensembl	74_37	+1	known	missense	c.56	p.W19L	0.993	NULL	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	-	no_errors	RNASE8	HGNC	ENSG00000173431	tier1	-	-	30	0	0.00	18	3	14.29
TP53	0	genome.wustl.edu	37	17	7577505	7577505	+	Missense_Mutation	SNP	T	T	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	17	7577505	7577505	T	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.776	p.D259V	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	35	0	0.00	9	22	70.97
RANBP2	0	genome.wustl.edu	37	2	109368152	109368152	+	Missense_Mutation	SNP	A	A	G			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	2	109368152	109368152	A	G	SNP	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	missense	c.1624	p.K542E	1.000	NULL	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201	tier1	-	-	74	0	0.00	47	8	14.29
RYR3	0	genome.wustl.edu	37	15	33936613	33936613	+	Nonsense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	15	33936613	33936613	G	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	nonsense	c.3658	p.E1220*	1.000	NULL	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	34	0	0.00	39	4	9.30
KDELC2	0	genome.wustl.edu	37	11	108357048	108357048	+	Missense_Mutation	SNP	T	T	C			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	11	108357048	108357048	T	C	SNP	KDELC2	ENST00000323468	human	ensembl	74_37	-1	known	missense	c.520	p.N174D	1.000	pfam_LipoPS_modifying	pfam_LipoPS_modifying,pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,smart_LipoPS_modifying,pfscan_Filamin/ABP280_repeat-like	-	no_errors	KDELC2	HGNC	ENSG00000178202	tier1	-	-	39	0	0.00	33	4	10.81
FOXK1	0	genome.wustl.edu	37	7	4722449	4722449	+	Silent	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	4722449	4722449	G	T	SNP	FOXK1	ENST00000328914	human	ensembl	74_37	+1	known	silent	c.510	p.V170	1.000	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	pfam_TF_fork_head,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_TF_fork_head,pfscan_FHA_dom,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXK1	HGNC	ENSG00000164916	tier1	-	-	21	0	0.00	10	10	50.00
LOC283693	0	genome.wustl.edu	37	15	83395590	83395590	+	RNA	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	15	83395590	83395590	G	T	SNP	LOC283693	ENST00000560958	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-752G15.9	Clone_based_vega_gene	ENSG00000259315	tier1	-	-	24	0	0.00	31	4	11.43
TRIO	0	genome.wustl.edu	37	5	14378175	14378175	+	Missense_Mutation	SNP	T	T	C			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	5	14378175	14378175	T	C	SNP	TRIO	ENST00000344204	human	ensembl	74_37	+1	known	missense	c.3386	p.M1129T	1.000	NULL	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	TRIO	HGNC	ENSG00000038382	tier1	-	-	34	0	0.00	41	4	8.89
GGCX	0	genome.wustl.edu	37	2	85779538	85779538	+	Splice_Site	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	2	85779538	85779538	C	T	SNP	GGCX	ENST00000233838	human	ensembl	74_37	-1	known	splice_site	c.1439+1	e10+1	1.000	-	-	-	no_errors	GGCX	HGNC	ENSG00000115486	tier1	-	-	48	0	0.00	37	4	9.76
LRPPRC	0	genome.wustl.edu	37	2	44175301	44175301	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	2	44175301	44175301	C	T	SNP	LRPPRC	ENST00000260665	human	ensembl	74_37	-1	known	missense	c.1880	p.R627H	1.000	NULL	pfam_Pentatricopeptide_repeat,tigrfam_Pentatricopeptide_repeat	-	no_errors	LRPPRC	HGNC	ENSG00000138095	tier1	-	-	30	0	0.00	16	3	15.79
GALNT9	0	genome.wustl.edu	37	12	132685742	132685742	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	12	132685742	132685742	C	T	SNP	GALNT9	ENST00000328957	human	ensembl	74_37	-1	known	missense	c.1328	p.R443H	1.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT9	HGNC	ENSG00000182870	tier1	-	-	38	0	0.00	29	4	12.12
NRF1	0	genome.wustl.edu	37	7	129311328	129311328	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	129311328	129311328	C	T	SNP	NRF1	ENST00000393231	human	ensembl	74_37	+1	known	missense	c.283	p.H95Y	1.000	pfam_Nrf1_NLS/DNA-bd_dimer	pfam_Nrf1_NLS/DNA-bd_dimer,pfam_Nrf1_activation-bd	-	no_errors	NRF1	HGNC	ENSG00000106459	tier1	-	-	31	0	0.00	26	5	16.13
IFNA6	0	genome.wustl.edu	37	9	21350362	21350362	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	9	21350362	21350362	G	T	SNP	IFNA6	ENST00000380210	human	ensembl	74_37	-1	known	missense	c.525	p.F175L	0.205	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNA6	HGNC	ENSG00000120235	tier1	-	-	76	0	0.00	38	4	9.52
GPR124	0	genome.wustl.edu	37	8	37698851	37698851	+	Nonsense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	8	37698851	37698851	C	T	SNP	GPR124	ENST00000412232	human	ensembl	74_37	+1	known	nonsense	c.2995	p.R999*	0.001	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,pfscan_GPS_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom	-	no_errors	GPR124	HGNC	ENSG00000020181	tier1	-	-	42	0	0.00	46	4	8.00
C1orf198	0	genome.wustl.edu	37	1	231004075	231004075	+	Missense_Mutation	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	231004075	231004075	G	A	SNP	C1orf198	ENST00000366663	human	ensembl	74_37	-1	known	missense	c.184	p.P62S	1.000	NULL	NULL	-	no_errors	C1orf198	HGNC	ENSG00000119280	tier1	-	-	35	0	0.00	26	4	13.33
CHPF	0	genome.wustl.edu	37	2	220404162	220404162	+	Silent	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	2	220404162	220404162	G	T	SNP	CHPF	ENST00000243776	human	ensembl	74_37	-1	known	silent	c.2271	p.G757	1.000	pfam_Chond_GalNAc	pfam_Chond_GalNAc	-	no_errors	CHPF	HGNC	ENSG00000123989	tier1	-	-	62	0	0.00	33	4	10.81
CASP8	0	genome.wustl.edu	37	2	202139626	202139626	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	2	202139626	202139626	G	T	SNP	CASP8	ENST00000358485	human	ensembl	74_37	+1	known	missense	c.787	p.G263W	0.000	superfamily_DEATH-like_dom	pfam_DED,pfam_Pept_C14_caspase,superfamily_DEATH-like_dom,smart_DED,smart_Pept_C14A_p45_core,pfscan_DED,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP8	HGNC	ENSG00000064012	tier1	-	-	44	0	0.00	42	4	8.70
PARVB	0	genome.wustl.edu	37	22	44543775	44543775	+	Silent	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	22	44543775	44543775	C	T	SNP	PARVB	ENST00000406477	human	ensembl	74_37	+1	known	silent	c.846	p.A282	1.000	superfamily_CH-domain	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	PARVB	HGNC	ENSG00000188677	tier1	-	-	22	0	0.00	18	7	28.00
TEX35	0	genome.wustl.edu	37	1	178489670	178489670	+	Nonsense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	178489670	178489670	G	T	SNP	TEX35	ENST00000367642	human	ensembl	74_37	+1	putative	nonsense	c.268	p.E90*	0.000	NULL	NULL	-	no_errors	TEX35	HGNC	ENSG00000240021	tier1	-	-	30	0	0.00	38	4	9.52
CLPTM1	0	genome.wustl.edu	37	19	45477820	45477820	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	19	45477820	45477820	G	T	SNP	CLPTM1	ENST00000337392	human	ensembl	74_37	+1	known	missense	c.434	p.C145F	1.000	pfam_CLPTM1	pfam_CLPTM1	-	no_errors	CLPTM1	HGNC	ENSG00000104853	tier1	-	-	19	0	0.00	7	3	30.00
CCNG1	0	genome.wustl.edu	37	5	162868282	162868282	+	Missense_Mutation	SNP	T	T	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	5	162868282	162868282	T	A	SNP	CCNG1	ENST00000340828	human	ensembl	74_37	+1	known	missense	c.463	p.F155I	1.000	NULL	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNG1	HGNC	ENSG00000113328	tier1	-	-	35	0	0.00	25	4	13.79
LOC101927832	0	genome.wustl.edu	37	3	142720221	142720222	+	RNA	INS	-	-	GGACAACGA			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	3	142720221	142720222	-	GGACAACGA	INS	LOC101927832	ENST00000595248	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005:0.015	-	-	-	no_errors	RP11-372E1.6	Clone_based_vega_gene	ENSG00000241570	tier1			NA	NA	NA	NA	NA	NA
CYP3A7	0	genome.wustl.edu	37	7	99308456	99308456	+	Missense_Mutation	SNP	T	T	C			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	99308456	99308456	T	C	SNP	CYP3A7	ENST00000336374	human	ensembl	74_37	-1	known	missense	c.925	p.T309A	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_CYP3A,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-II,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP3A7	HGNC	ENSG00000160870	tier1	-	-	39	0	0.00	44	4	8.33
MAML3	0	genome.wustl.edu	37	4	140811111	140811111	+	Silent	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	4	140811111	140811111	C	T	SNP	MAML3	ENST00000509479	human	ensembl	74_37	-1	known	silent	c.1479	p.Q493	1.000	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML3	HGNC	ENSG00000196782	tier1	rs62344937	-	24	0	0.00	22	5	18.52
MED15	0	genome.wustl.edu	37	22	20918916	20918918	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	22	20918916	20918918	CAG	-	DEL	MED15	ENST00000263205	human	ensembl	74_37	+1	known	in_frame_del	c.631_633	p.Q214in_frame_del	0.552:0.544:0.569	pfam_Mediator_Med15_met	pfam_Mediator_Med15_met	-	no_errors	MED15	HGNC	ENSG00000099917	tier1			29	0	0.00	25	5	16.67
PDE1B	0	genome.wustl.edu	37	12	54966992	54966992	+	Nonsense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	12	54966992	54966992	G	T	SNP	PDE1B	ENST00000243052	human	ensembl	74_37	+1	known	nonsense	c.796	p.E266*	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	pfam_PDEase_catalytic_dom,pfam_PDEase_N,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE1B	HGNC	ENSG00000123360	tier1	-	-	39	0	0.00	16	3	15.79
ELAVL3	0	genome.wustl.edu	37	19	11569017	11569017	+	Missense_Mutation	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	19	11569017	11569017	G	A	SNP	ELAVL3	ENST00000359227	human	ensembl	74_37	-1	known	missense	c.572	p.P191L	0.998	smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL3	HGNC	ENSG00000196361	tier1	rs148057857	-	35	0	0.00	29	6	17.14
OR10H1	0	genome.wustl.edu	37	19	15918201	15918201	+	Missense_Mutation	SNP	A	A	G			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	19	15918201	15918201	A	G	SNP	OR10H1	ENST00000334920	human	ensembl	74_37	-1	known	missense	c.647	p.L216P	0.436	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10H1	HGNC	ENSG00000186723	tier1	rs201868341	-	52	0	0.00	56	10	15.15
ZNF800	0	genome.wustl.edu	37	7	127014569	127014569	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	127014569	127014569	G	T	SNP	ZNF800	ENST00000265827	human	ensembl	74_37	-1	known	missense	c.821	p.S274Y	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF800	HGNC	ENSG00000048405	tier1	-	-	22	0	0.00	12	3	20.00
PIGG	0	genome.wustl.edu	37	4	493032	493032	+	RNA	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	4	493032	493032	G	A	SNP	PIGG	ENST00000502311	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PIGG	HGNC	ENSG00000174227	tier1	-	-	15	0	0.00	12	12	50.00
HERC2P4	0	genome.wustl.edu	37	16	32163469	32163469	+	RNA	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	16	32163469	32163469	G	A	SNP	HERC2P4	ENST00000563904	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.986	-	-	-	no_errors	HERC2P4	HGNC	ENSG00000230267	tier1	-	-	98	0	0.00	52	10	16.13
PGAM1P5	0	genome.wustl.edu	37	12	96066670	96066670	+	RNA	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	12	96066670	96066670	G	T	SNP	PGAM1P5	ENST00000552554	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PGAM1P5	HGNC	ENSG00000257150	tier1	-	-	42	0	0.00	30	14	31.82
CHL1	0	genome.wustl.edu	37	3	424203	424203	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	3	424203	424203	G	T	SNP	CHL1	ENST00000256509	human	ensembl	74_37	+1	known	missense	c.2025	p.W675C	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CHL1	HGNC	ENSG00000134121	tier1	-	-	41	0	0.00	39	10	20.41
FGB	0	genome.wustl.edu	37	4	155489556	155489556	+	Missense_Mutation	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	4	155489556	155489556	G	A	SNP	FGB	ENST00000302068	human	ensembl	74_37	+1	known	missense	c.742	p.G248R	1.000	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibrinogen_a/b/g_C_dom,pfam_Fibrinogen_a/b/g_coil_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	FGB	HGNC	ENSG00000171564	tier1	-	-	32	0	0.00	12	11	47.83
PLCG2	0	genome.wustl.edu	37	16	81914547	81914547	+	Silent	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	16	81914547	81914547	G	T	SNP	PLCG2	ENST00000359376	human	ensembl	74_37	+1	known	silent	c.681	p.V227	1.000	pirsf_PLC-gamma	pfam_PLipase_C_PInositol-sp_X_dom,pfam_SH2,pfam_PLipase_C_Pinositol-sp_Y,pfam_SH3_domain,pfam_C2_dom,pfam_PLipase_C_EF-hand-like,pfam_SH3_2,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_SH2,smart_SH3_domain,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pirsf_PLC-gamma,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C,prints_SH2,prints_SH3_domain	-	no_errors	PLCG2	HGNC	ENSG00000197943	tier1	-	-	45	0	0.00	42	4	8.70
NFAT5	0	genome.wustl.edu	37	16	69729107	69729124	+	In_Frame_Del	DEL	GGCCAACCACAAAACGAG	GGCCAACCACAAAACGAG	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	GGCCAACCACAAAACGAG	GGCCAACCACAAAACGAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	16	69729107	69729124	GGCCAACCACAAAACGAG	-	DEL	NFAT5	ENST00000432919	human	ensembl	74_37	+1	known	in_frame_del	c.4483_4500	p.QNEGQP1498in_frame_del	1.000:1.000:0.997:1.000:1.000:0.987:1.000:1.000:0.988:1.000:1.000:1.000:0.998:0.985:0.965:1.000:1.000:1.000	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFAT5	HGNC	ENSG00000102908	tier1			NA	NA	NA	NA	NA	NA
ENSG00000215954	0	genome.wustl.edu	37	11	112118610	112118619	+	RNA	DEL	ACACACACAC	ACACACACAC	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	ACACACACAC	ACACACACAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	11	112118610	112118619	ACACACACAC	-	DEL	ENSG00000215954	ENST00000401135	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.028:0.021:0.024:0.025:0.042:0.052:0.057:0.059:0.067:0.070	-	-	-	no_errors	AP002884.1	Clone_based_ensembl_gene	ENSG00000215954	tier1			NA	NA	NA	NA	NA	NA
CNTN6	0	genome.wustl.edu	37	3	1371493	1371493	+	Missense_Mutation	SNP	G	G	C			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	3	1371493	1371493	G	C	SNP	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	missense	c.1238	p.S413T	0.958	pfam_Ig_I-set,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115	tier1	-	-	45	0	0.00	53	7	11.48
ANKRD42	0	genome.wustl.edu	37	11	82935896	82935896	+	Splice_Site	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	11	82935896	82935896	G	T	SNP	ANKRD42	ENST00000393392	human	ensembl	74_37	+1	known	splice_site	c.503-1	e6-1	1.000	-	-	-	no_errors	ANKRD42	HGNC	ENSG00000137494	tier1	-	-	37	0	0.00	43	4	8.51
ZMYM4	0	genome.wustl.edu	37	1	35846959	35846960	+	Frame_Shift_Ins	INS	-	-	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	35846959	35846960	-	A	INS	ZMYM4	ENST00000314607	human	ensembl	74_37	+1	known	frame_shift_ins	c.1281_1282	p.P430fs	0.987:1.000	NULL	pfam_DUF3504,pfam_Znf_MYM,smart_TRASH_dom	-	no_errors	ZMYM4	HGNC	ENSG00000146463	tier1			25	0	0.00	17	2	10.53
DUSP10	0	genome.wustl.edu	37	1	221875157	221875158	+	RNA	DEL	AA	AA	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	221875157	221875158	AA	-	DEL	DUSP10	ENST00000468085	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	DUSP10	HGNC	ENSG00000143507	tier1			14	0	0.00	12	3	20.00
WDR81	0	genome.wustl.edu	37	17	1631292	1631292	+	Silent	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	17	1631292	1631292	G	A	SNP	WDR81	ENST00000409644	human	ensembl	74_37	+1	known	silent	c.3039	p.A1013	0.912	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Kinase-like_dom,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR81	HGNC	ENSG00000167716	tier1	-	-	25	0	0.00	6	6	50.00
ELN	0	genome.wustl.edu	37	7	73467612	73467612	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	73467612	73467612	G	T	SNP	ELN	ENST00000358929	human	ensembl	74_37	+1	known	missense	c.1069	p.A357S	0.922	NULL	prints_Tropoelastin	-	no_errors	ELN	HGNC	ENSG00000049540	tier1	-	-	40	0	0.00	43	4	8.51
AP3D1	0	genome.wustl.edu	37	19	2115549	2115549	+	Missense_Mutation	SNP	A	A	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	19	2115549	2115549	A	T	SNP	AP3D1	ENST00000355272	human	ensembl	74_37	-1	known	missense	c.2137	p.L713M	0.254	pfam_BLV_receptor,pirsf_AP3_complex_dsu	pfam_BLV_receptor,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_dsu	-	no_errors	AP3D1	HGNC	ENSG00000065000	tier1	-	-	32	0	0.00	21	12	36.36
RHBG	0	genome.wustl.edu	37	1	156354244	156354244	+	Missense_Mutation	SNP	T	T	C			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	156354244	156354244	T	C	SNP	RHBG	ENST00000451864	human	ensembl	74_37	+1	known	missense	c.1040	p.L347P	0.000	NULL	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	-	no_errors	RHBG	HGNC	ENSG00000132677	tier1	-	-	29	0	0.00	29	5	14.71
GIMAP8	0	genome.wustl.edu	37	7	150174802	150174802	+	Missense_Mutation	SNP	T	T	G			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	150174802	150174802	T	G	SNP	GIMAP8	ENST00000307271	human	ensembl	74_37	+1	known	missense	c.1932	p.I644M	0.000	pfam_AIG1	pfam_AIG1,superfamily_P-loop_NTPase	-	no_errors	GIMAP8	HGNC	ENSG00000171115	tier1	-	-	56	0	0.00	37	17	30.91
KLKB1	0	genome.wustl.edu	37	4	187171526	187171526	+	Missense_Mutation	SNP	A	A	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	4	187171526	187171526	A	T	SNP	KLKB1	ENST00000264690	human	ensembl	74_37	+1	known	missense	c.728	p.Y243F	0.929	pfam_PAN-1_domain,smart_Apple,pfscan_Pan_app,prints_Apple	pfam_Peptidase_S1,pfam_PAN-1_domain,superfamily_Trypsin-like_Pept_dom,smart_Apple,smart_Peptidase_S1,pfscan_Pan_app,pfscan_Peptidase_S1,prints_Apple,prints_Peptidase_S1A	-	no_errors	KLKB1	HGNC	ENSG00000164344	tier1	-	-	48	0	0.00	37	10	21.28
ACPP	0	genome.wustl.edu	37	3	132075691	132075691	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	3	132075691	132075691	G	T	SNP	ACPP	ENST00000351273	human	ensembl	74_37	+1	known	missense	c.1130	p.S377I	0.000	NULL	pfam_His_Pase_superF_clade-2	-	no_errors	ACPP	HGNC	ENSG00000014257	tier1	-	-	22	0	0.00	23	4	14.81
UNC93A	0	genome.wustl.edu	37	6	167728838	167728838	+	Silent	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	6	167728838	167728838	G	T	SNP	UNC93A	ENST00000230256	human	ensembl	74_37	+1	known	silent	c.1272	p.A424	0.000	superfamily_MFS_dom_general_subst_transpt	pfam_Ion_channel_UNC-93,superfamily_MFS_dom_general_subst_transpt	-	no_errors	UNC93A	HGNC	ENSG00000112494	tier1	-	-	79	0	0.00	77	22	22.22
THAP5	0	genome.wustl.edu	37	7	108205136	108205136	+	Silent	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	108205136	108205136	G	A	SNP	THAP5	ENST00000415914	human	ensembl	74_37	-1	known	silent	c.687	p.T229	0.014	NULL	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP5	HGNC	ENSG00000177683	tier1	-	-	39	0	0.00	29	3	9.38
MACF1	0	genome.wustl.edu	37	1	39798401	39798401	+	Silent	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	39798401	39798401	G	A	SNP	MACF1	ENST00000567887	human	ensembl	74_37	+1	putative	silent	c.6252	p.Q2084	0.003	superfamily_RNaseH-like_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_RNaseH-like_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1	-	-	13	0	0.00	5	6	54.55
BARD1	0	genome.wustl.edu	37	2	215645861	215645861	+	Frame_Shift_Del	DEL	G	G	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	2	215645861	215645861	G	-	DEL	BARD1	ENST00000260947	human	ensembl	74_37	-1	known	frame_shift_del	c.737	p.P246fs	0.001	NULL	pfam_Ankyrin_rpt,pfam_BRCT_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_BRCT_dom,smart_Ankyrin_rpt,smart_BRCT_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BRCT_dom,pfscan_Znf_RING,prints_Ankyrin_rpt	-	no_errors	BARD1	HGNC	ENSG00000138376	tier1			39	0	0.00	11	2	15.38
ZAN	0	genome.wustl.edu	37	7	100344302	100344302	+	Missense_Mutation	SNP	T	T	C			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	100344302	100344302	T	C	SNP	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	missense	c.908	p.L303P	0.089	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839	tier1	-	-	33	0	0.00	9	16	64.00
TSHZ3	0	genome.wustl.edu	37	19	31769390	31769390	+	Silent	SNP	G	G	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	19	31769390	31769390	G	A	SNP	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	silent	c.1309	p.L437	0.954	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297	tier1	-	-	40	0	0.00	24	10	29.41
PDPR	0	genome.wustl.edu	37	16	70154480	70154480	+	Missense_Mutation	SNP	A	A	G			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	16	70154480	70154480	A	G	SNP	PDPR	ENST00000288050	human	ensembl	74_37	+1	known	missense	c.85	p.T29A	0.000	NULL	pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C,pfam_FAD_bind_dom	-	no_errors	PDPR	HGNC	ENSG00000090857	tier1	rs200469748	-	28	0	0.00	33	8	19.51
WDHD1	0	genome.wustl.edu	37	14	55480246	55480246	+	Missense_Mutation	SNP	T	T	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	14	55480246	55480246	T	A	SNP	WDHD1	ENST00000360586	human	ensembl	74_37	-1	known	missense	c.146	p.K49M	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_DUF3639,pfam_TIF_beta_prop-like,superfamily_WD40_repeat_dom,superfamily_HMG_box_dom,smart_WD40_repeat,smart_HMG_box_dom,pfscan_HMG_box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDHD1	HGNC	ENSG00000198554	tier1	-	-	29	0	0.00	9	7	43.75
INPP5D	0	genome.wustl.edu	37	2	234106746	234106746	+	Missense_Mutation	SNP	C	C	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	2	234106746	234106746	C	T	SNP	INPP5D	ENST00000359570	human	ensembl	74_37	+1	known	missense	c.2663	p.P888L	0.193	NULL	pfam_Endo/exonuclease/phosphatase,pfam_SH2,superfamily_Endo/exonuclease/phosphatase,smart_SH2,smart_IPPc,pfscan_SH2,prints_SH2	-	no_errors	INPP5D	HGNC	ENSG00000168918	tier1	-	-	43	0	0.00	16	4	19.05
LOC100130331	0	genome.wustl.edu	37	1	238090602	238090607	+	RNA	DEL	GGGTCA	GGGTCA	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	GGGTCA	GGGTCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	1	238090602	238090607	GGGTCA	-	DEL	LOC100130331	ENST00000450451	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:0.998:1.000:1.000:1.000:1.000	-	-	-	no_errors	RP11-193H5.1	Clone_based_vega_gene	ENSG00000237250	tier1			NA	NA	NA	NA	NA	NA
CDON	0	genome.wustl.edu	37	11	125880373	125880373	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	11	125880373	125880373	G	T	SNP	CDON	ENST00000392693	human	ensembl	74_37	-1	known	missense	c.1415	p.P472H	0.997	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CDON	HGNC	ENSG00000064309	tier1	-	-	51	0	0.00	40	4	9.09
SDCBP	0	genome.wustl.edu	37	8	59494256	59494256	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	8	59494256	59494256	G	T	SNP	SDCBP	ENST00000260130	human	ensembl	74_37	+1	known	missense	c.854	p.S285I	1.000	superfamily_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SDCBP	HGNC	ENSG00000137575	tier1	-	-	19	0	0.00	15	3	16.67
TACO1	0	genome.wustl.edu	37	17	61681893	61681893	+	Splice_Site	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	17	61681893	61681893	G	T	SNP	TACO1	ENST00000258975	human	ensembl	74_37	+1	known	splice_site	c.281-1	e2-1	1.000	-	-	-	no_errors	TACO1	HGNC	ENSG00000136463	tier1	-	-	17	0	0.00	11	4	26.67
OTOP1	0	genome.wustl.edu	37	4	4204225	4204229	+	Frame_Shift_Del	DEL	TTGAG	TTGAG	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	TTGAG	TTGAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	4	4204225	4204229	TTGAG	-	DEL	OTOP1	ENST00000296358	human	ensembl	74_37	-1	known	frame_shift_del	c.680_676	p.L226fs	0.998:0.995:0.417:0.986:0.987	pfam_Otopetrin	pfam_Otopetrin	-	no_errors	OTOP1	HGNC	ENSG00000163982	tier1			NA	NA	NA	NA	NA	NA
LEO1	0	genome.wustl.edu	37	15	52258498	52258498	+	Missense_Mutation	SNP	A	A	G			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	15	52258498	52258498	A	G	SNP	LEO1	ENST00000299601	human	ensembl	74_37	-1	known	missense	c.262	p.S88P	0.999	NULL	pfam_Leo1	-	no_errors	LEO1	HGNC	ENSG00000166477	tier1	-	-	38	0	0.00	35	4	10.26
ATP10B	0	genome.wustl.edu	37	5	159992826	159992826	+	Missense_Mutation	SNP	G	G	T			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	5	159992826	159992826	G	T	SNP	ATP10B	ENST00000327245	human	ensembl	74_37	-1	known	missense	c.4020	p.D1340E	0.921	NULL	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10B	HGNC	ENSG00000118322	tier1	-	-	22	0	0.00	12	17	58.62
DPY19L1	0	genome.wustl.edu	37	7	35006539	35006539	+	Silent	SNP	T	T	A			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	7	35006539	35006539	T	A	SNP	DPY19L1	ENST00000310974	human	ensembl	74_37	-1	known	silent	c.840	p.I280	0.993	pfam_Dpy-19	pfam_Dpy-19	-	no_errors	DPY19L1	HGNC	ENSG00000173852	tier1	-	-	41	0	0.00	35	4	10.26
DLC1	0	genome.wustl.edu	37	8	12943086	12943087	+	RNA	DEL	TT	TT	-			TCGA-WK-A8XX-01A-11D-A37C-09	TCGA-WK-A8XX-10A-01D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fde6b1fa-e014-4a04-ab32-1f035cc3ad88	385b779c-11ea-4519-a025-a0fb7f0f2fb6	8	12943086	12943087	TT	-	DEL	DLC1	ENST00000510318	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	DLC1	HGNC	ENSG00000164741	tier1			23	0	0.00	23	3	11.54
