Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
CSPG5	0	genome.wustl.edu	37	3	47618467	47618467	+	Nonsense_Mutation	SNP	A	A	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	47618467	47618467	A	T	SNP	CSPG5	ENST00000383738	human	ensembl	74_37	-1	known	nonsense	c.1049	p.L350*	1.000	NULL	pfam_Chon_Sulph_att,pfam_Neural_ProG_Cyt	-	no_errors	CSPG5	HGNC	ENSG00000114646	tier1	-	-	50	0	0.00	31	14	31.11
KRT1	0	genome.wustl.edu	37	12	53069223	53069243	+	In_Frame_Del	DEL	ACCTCCGGAGCCGTAGCTGCT	ACCTCCGGAGCCGTAGCTGCT	-			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	ACCTCCGGAGCCGTAGCTGCT	ACCTCCGGAGCCGTAGCTGCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	12	53069223	53069243	ACCTCCGGAGCCGTAGCTGCT	-	DEL	KRT1	ENST00000252244	human	ensembl	74_37	-1	known	in_frame_del	c.1689_1669	p.SSYGSGG557in_frame_del	0.630:0.649:0.647:0.620:0.134:0.123:0.092:0.297:0.354:0.356:0.356:0.216:0.007:0.001:0.003:0.006:0.057:0.050:0.289:0.318:0.300	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT1	HGNC	ENSG00000167768	tier1			NA	NA	NA	NA	NA	NA
NLRP5	0	genome.wustl.edu	37	19	56544095	56544095	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	56544095	56544095	A	G	SNP	NLRP5	ENST00000390649	human	ensembl	74_37	+1	known	missense	c.2395	p.K799E	0.610	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP5	HGNC	ENSG00000171487	tier1	-	-	41	0	0.00	42	12	22.22
CRNN	0	genome.wustl.edu	37	1	152382768	152382768	+	Missense_Mutation	SNP	G	G	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	152382768	152382768	G	C	SNP	CRNN	ENST00000271835	human	ensembl	74_37	-1	known	missense	c.790	p.Q264E	0.914	NULL	pfam_S100_Ca-bd_sub,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CRNN	HGNC	ENSG00000143536	tier1	-	-	77	0	0.00	64	40	38.46
IKZF3	0	genome.wustl.edu	37	17	37934017	37934017	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	17	37934017	37934017	C	T	SNP	IKZF3	ENST00000346872	human	ensembl	74_37	-1	known	missense	c.713	p.S238N	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF3	HGNC	ENSG00000161405	tier1	-	-	67	0	0.00	20	29	59.18
PPP2R1A	0	genome.wustl.edu	37	19	52719809	52719809	+	Missense_Mutation	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	52719809	52719809	G	A	SNP	PPP2R1A	ENST00000322088	human	ensembl	74_37	+1	known	missense	c.1021	p.V341I	1.000	superfamily_ARM-type_fold,pfscan_HEAT_type_2	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP2R1A	HGNC	ENSG00000105568	tier1	-	-	52	0	0.00	39	4	9.30
CHRNA3	0	genome.wustl.edu	37	15	78893698	78893698	+	Missense_Mutation	SNP	T	T	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	15	78893698	78893698	T	C	SNP	CHRNA3	ENST00000326828	human	ensembl	74_37	-1	known	missense	c.1286	p.D429G	0.096	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA3	HGNC	ENSG00000080644	tier1	-	-	67	0	0.00	34	15	30.61
CHMP4B	0	genome.wustl.edu	37	20	32399398	32399398	+	Missense_Mutation	SNP	T	T	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	20	32399398	32399398	T	A	SNP	CHMP4B	ENST00000217402	human	ensembl	74_37	+1	known	missense	c.124	p.F42I	1.000	pfam_Snf7	pfam_Snf7	-	no_errors	CHMP4B	HGNC	ENSG00000101421	tier1	-	-	109	0	0.00	69	25	26.60
TMPRSS15	0	genome.wustl.edu	37	21	19726140	19726140	+	Missense_Mutation	SNP	A	A	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	21	19726140	19726140	A	T	SNP	TMPRSS15	ENST00000284885	human	ensembl	74_37	-1	known	missense	c.921	p.F307L	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_Peptidase_S1,pfam_CUB_dom,pfam_MAM_dom,pfam_SEA_dom,pfam_LDrepeatLR_classA_rpt,pfam_Peptidase_S1A_nudel,pfam_SRCR,superfamily_Trypsin-like_Pept_dom,superfamily_ConA-like_lec_gl_sf,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_Srcr_rcpt-rel,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_MAM_dom,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,pfscan_SEA_dom,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A,prints_LDrepeatLR_classA_rpt	-	no_errors	TMPRSS15	HGNC	ENSG00000154646	tier1	-	-	78	0	0.00	37	26	41.27
SEC24D	0	genome.wustl.edu	37	4	119666191	119666191	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	4	119666191	119666191	A	G	SNP	SEC24D	ENST00000379735	human	ensembl	74_37	-1	known	missense	c.1735	p.F579L	1.000	pfam_Sec23/24_trunk_dom	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom	-	no_errors	SEC24D	HGNC	ENSG00000150961	tier1	-	-	33	0	0.00	28	8	22.22
RNF139	0	genome.wustl.edu	37	8	125498135	125498144	+	Frame_Shift_Del	DEL	ACAGCTCAGC	ACAGCTCAGC	-			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	ACAGCTCAGC	ACAGCTCAGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	8	125498135	125498144	ACAGCTCAGC	-	DEL	RNF139	ENST00000303545	human	ensembl	74_37	+1	known	frame_shift_del	c.245_254	p.Y82fs	1.000:1.000:1.000:1.000:0.999:0.974:0.827:0.753:1.000:1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF139	HGNC	ENSG00000170881	tier1			NA	NA	NA	NA	NA	NA
ZNF573	0	genome.wustl.edu	37	19	38283217	38283217	+	RNA	SNP	T	T	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	38283217	38283217	T	A	SNP	ZNF573	ENST00000480587	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.535	-	-	-	no_errors	ZNF573	HGNC	ENSG00000189144	tier1	-	-	93	0	0.00	81	13	13.83
HECTD2	0	genome.wustl.edu	37	10	93220291	93220291	+	Missense_Mutation	SNP	C	C	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	10	93220291	93220291	C	A	SNP	HECTD2	ENST00000446394	human	ensembl	74_37	+1	known	missense	c.376	p.P126T	1.000	NULL	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	-	no_errors	HECTD2	HGNC	ENSG00000165338	tier1	-	-	52	0	0.00	22	6	21.43
RLIM	0	genome.wustl.edu	37	X	73812194	73812194	+	Missense_Mutation	SNP	A	A	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	X	73812194	73812194	A	T	SNP	RLIM	ENST00000332687	human	ensembl	74_37	-1	known	missense	c.956	p.I319K	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RLIM	HGNC	ENSG00000131263	tier1	-	-	18	0	0.00	7	8	53.33
DHX8	0	genome.wustl.edu	37	17	41576233	41576233	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	17	41576233	41576233	A	G	SNP	DHX8	ENST00000262415	human	ensembl	74_37	+1	known	missense	c.1304	p.E435G	1.000	NULL	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX8	HGNC	ENSG00000067596	tier1	-	-	55	0	0.00	30	4	11.76
CCDC30	0	genome.wustl.edu	37	1	43002200	43002201	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	43002200	43002201	AG	-	DEL	CCDC30	ENST00000340612	human	ensembl	74_37	+1	known	frame_shift_del	c.45_46	p.R19fs	1.000:0.998	NULL	NULL	-	no_errors	CCDC30	HGNC	ENSG00000186409	tier1			38	0	0.00	25	4	13.79
CDKL5	0	genome.wustl.edu	37	X	18627005	18627005	+	Silent	SNP	T	T	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	X	18627005	18627005	T	G	SNP	CDKL5	ENST00000379989	human	ensembl	74_37	+1	known	silent	c.2019	p.S673	0.993	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDKL5	HGNC	ENSG00000008086	tier1	-	-	83	0	0.00	50	16	24.24
PRKCI	0	genome.wustl.edu	37	3	170002345	170002345	+	Silent	SNP	T	T	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	170002345	170002345	T	C	SNP	PRKCI	ENST00000295797	human	ensembl	74_37	+1	known	silent	c.1164	p.S388	0.688	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_PKC_zeta,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_OPR_PB1,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_OPR_PB1,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_PKC_zeta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKCI	HGNC	ENSG00000163558	tier1	-	-	53	0	0.00	46	4	8.00
C3orf20	0	genome.wustl.edu	37	3	14755555	14755555	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	14755555	14755555	G	T	SNP	C3orf20	ENST00000253697	human	ensembl	74_37	+1	known	missense	c.1202	p.C401F	1.000	NULL	NULL	-	no_errors	C3orf20	HGNC	ENSG00000131379	tier1	-	-	30	0	0.00	45	4	8.16
ELFN2	0	genome.wustl.edu	37	22	37769292	37769292	+	Nonsense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	22	37769292	37769292	G	T	SNP	ELFN2	ENST00000402918	human	ensembl	74_37	-1	known	nonsense	c.2283	p.Y761*	1.000	NULL	superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,pfscan_LPXTG_anchor	-	no_errors	ELFN2	HGNC	ENSG00000166897	tier1	-	-	57	0	0.00	36	23	38.98
DYNC2H1	0	genome.wustl.edu	37	11	103091433	103091433	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	11	103091433	103091433	C	T	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.9028	p.P3010S	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	-	-	62	0	0.00	30	4	11.76
THRB	0	genome.wustl.edu	37	3	24164567	24164567	+	Silent	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	24164567	24164567	A	G	SNP	THRB	ENST00000356447	human	ensembl	74_37	-1	known	silent	c.1194	p.S398	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_ThyrH_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	THRB	HGNC	ENSG00000151090	tier1	-	-	79	0	0.00	85	9	9.57
TRIO	0	genome.wustl.edu	37	5	14481717	14481717	+	Missense_Mutation	SNP	A	A	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	5	14481717	14481717	A	T	SNP	TRIO	ENST00000344204	human	ensembl	74_37	+1	known	missense	c.6455	p.Q2152L	1.000	NULL	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	TRIO	HGNC	ENSG00000038382	tier1	-	-	74	0	0.00	62	20	24.39
EFCAB11	0	genome.wustl.edu	37	14	90263599	90263599	+	Silent	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	14	90263599	90263599	C	T	SNP	EFCAB11	ENST00000316738	human	ensembl	74_37	-1	known	silent	c.480	p.Q160	0.004	pfscan_EF_hand_dom	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	EFCAB11	HGNC	ENSG00000140025	tier1	-	-	27	0	0.00	17	3	15.00
CRISPLD1	0	genome.wustl.edu	37	8	75928820	75928820	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	8	75928820	75928820	C	T	SNP	CRISPLD1	ENST00000262207	human	ensembl	74_37	+1	known	missense	c.748	p.P250S	0.019	NULL	pfam_LCCL,pfam_CAP_domain,superfamily_CAP_domain,superfamily_LCCL,smart_Allrgn_V5/Tpx1,smart_LCCL,pfscan_LCCL,prints_Allrgn_V5/Tpx1	-	no_errors	CRISPLD1	HGNC	ENSG00000121005	tier1	-	-	24	0	0.00	30	6	16.67
FAM131B	0	genome.wustl.edu	37	7	143055944	143055944	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	7	143055944	143055944	C	T	SNP	FAM131B	ENST00000443739	human	ensembl	74_37	-1	known	missense	c.442	p.E148K	1.000	NULL	NULL	-	no_errors	FAM131B	HGNC	ENSG00000159784	tier1	-	-	73	0	0.00	14	14	50.00
TP53	0	genome.wustl.edu	37	17	7577538	7577538	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	17	7577538	7577538	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.743	p.R248Q	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs11540652	-	71	0	0.00	0	71	100.00
KIF13A	0	genome.wustl.edu	37	6	17804729	17804729	+	Missense_Mutation	SNP	A	A	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	6	17804729	17804729	A	T	SNP	KIF13A	ENST00000259711	human	ensembl	74_37	-1	known	missense	c.2317	p.Y773N	0.022	pfam_KIF1B	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13A	HGNC	ENSG00000137177	tier1	-	-	63	0	0.00	13	33	71.74
MACF1	0	genome.wustl.edu	37	1	39800543	39800544	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	39800543	39800544	AG	-	DEL	MACF1	ENST00000567887	human	ensembl	74_37	+1	putative	frame_shift_del	c.8394_8395	p.D2799fs	0.714:0.727	superfamily_RNaseH-like_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_RNaseH-like_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1			22	0	0.00	24	11	31.43
CALML5	0	genome.wustl.edu	37	10	5541395	5541395	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	10	5541395	5541395	C	T	SNP	CALML5	ENST00000380332	human	ensembl	74_37	-1	known	missense	c.7	p.G3S	0.001	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CALML5	HGNC	ENSG00000178372	tier1	-	-	27	0	0.00	0	26	100.00
HSD3B1	0	genome.wustl.edu	37	1	120057126	120057126	+	Missense_Mutation	SNP	T	T	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	120057126	120057126	T	G	SNP	HSD3B1	ENST00000235547	human	ensembl	74_37	+1	known	missense	c.986	p.F329C	0.989	NULL	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_Male_sterile_NAD-bd,pfam_Polysac_CapD-like,pfam_DH_sc/Rdtase_SDR,pfam_dTDP_dehydrorham_reduct,pfam_PKS_KR,pfam_NmrA	-	no_errors	HSD3B1	HGNC	ENSG00000203857	tier1	-	-	50	0	0.00	1	19	95.00
LOC100996643	0	genome.wustl.edu	37	9	67291163	67291163	+	RNA	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	9	67291163	67291163	A	G	SNP	LOC100996643	ENST00000432011	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-236F9.2	Clone_based_vega_gene	ENSG00000228522	tier1	rs200595877	-	54	0	0.00	36	5	12.20
PCDHB14	0	genome.wustl.edu	37	5	140604757	140604757	+	Silent	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	5	140604757	140604757	C	T	SNP	PCDHB14	ENST00000239449	human	ensembl	74_37	+1	known	silent	c.1680	p.F560	0.766	superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB14	HGNC	ENSG00000120327	tier1	-	-	150	0	0.00	139	50	26.46
KIAA1217	0	genome.wustl.edu	37	10	24833379	24833379	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	10	24833379	24833379	C	T	SNP	KIAA1217	ENST00000376454	human	ensembl	74_37	+1	known	missense	c.5180	p.P1727L	1.000	NULL	pfam_AIP3_C	-	no_errors	KIAA1217	HGNC	ENSG00000120549	tier1	-	-	27	0	0.00	15	6	28.57
FAM19A5	0	genome.wustl.edu	37	22	49042466	49042466	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	22	49042466	49042466	C	T	SNP	FAM19A5	ENST00000358295	human	ensembl	74_37	+1	known	missense	c.149	p.P50L	1.000	pfam_Chemokine-like_FAM19A2	pfam_Chemokine-like_FAM19A2	-	no_errors	FAM19A5	HGNC	ENSG00000219438	tier1	-	-	170	0	0.00	96	35	26.72
LOC100507557	0	genome.wustl.edu	37	6	146206407	146206408	+	RNA	DEL	AC	AC	-			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	6	146206407	146206408	AC	-	DEL	LOC100507557	ENST00000606388	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999:0.991	-	-	-	no_errors	RP11-545I5.3	Clone_based_vega_gene	ENSG00000235652	tier1			9	0	0.00	5	7	58.33
ISPD	0	genome.wustl.edu	37	7	16317841	16317841	+	Silent	SNP	G	G	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	7	16317841	16317841	G	C	SNP	ISPD	ENST00000407010	human	ensembl	74_37	-1	known	silent	c.846	p.S282	0.998	NULL	pfam_IspD	-	no_errors	ISPD	HGNC	ENSG00000214960	tier1	-	-	79	0	0.00	63	20	24.10
TMCC2	0	genome.wustl.edu	37	1	205197803	205197803	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	205197803	205197803	G	T	SNP	TMCC2	ENST00000358024	human	ensembl	74_37	+1	known	missense	c.111	p.E37D	1.000	NULL	pfam_Predicted_TM_coiled-coil_2,superfamily_t-SNARE	-	no_errors	TMCC2	HGNC	ENSG00000133069	tier1	-	-	52	0	0.00	72	18	20.00
PLOD1	0	genome.wustl.edu	37	1	12009835	12009835	+	Silent	SNP	T	T	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	12009835	12009835	T	C	SNP	PLOD1	ENST00000376369	human	ensembl	74_37	+1	known	silent	c.315	p.L105	0.727	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD1	HGNC	ENSG00000083444	tier1	-	-	47	0	0.00	33	4	10.81
FBXL2	0	genome.wustl.edu	37	3	33318974	33318974	+	RNA	SNP	G	G	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	33318974	33318974	G	C	SNP	FBXL2	ENST00000283627	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	FBXL2	HGNC	ENSG00000153558	tier1	-	-	24	0	0.00	32	7	17.95
BCL2L14	0	genome.wustl.edu	37	12	12232253	12232253	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	12	12232253	12232253	G	T	SNP	BCL2L14	ENST00000308721	human	ensembl	74_37	+1	known	missense	c.14	p.S5I	0.729	NULL	pfscan_Bcl2-like	-	no_errors	BCL2L14	HGNC	ENSG00000121380	tier1	-	-	50	0	0.00	27	4	12.90
OR4A5	0	genome.wustl.edu	37	11	51412103	51412103	+	Missense_Mutation	SNP	T	T	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	11	51412103	51412103	T	G	SNP	OR4A5	ENST00000319760	human	ensembl	74_37	-1	known	missense	c.293	p.Q98P	0.985	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A5	HGNC	ENSG00000221840	tier1	-	-	61	0	0.00	32	17	34.69
UFL1	0	genome.wustl.edu	37	6	96986658	96986658	+	Missense_Mutation	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	6	96986658	96986658	G	A	SNP	UFL1	ENST00000369278	human	ensembl	74_37	+1	known	missense	c.1130	p.R377H	0.995	NULL	pfam_E3_UFM1_ligase_1	-	no_errors	UFL1	HGNC	ENSG00000014123	tier1	-	-	32	0	0.00	29	5	14.71
DGKK	0	genome.wustl.edu	37	X	50213247	50213247	+	RNA	SNP	T	T	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	X	50213247	50213247	T	A	SNP	DGKK	ENST00000376025	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.123	-	-	-	no_errors	DGKK	HGNC	ENSG00000204466	tier1	-	-	62	0	0.00	28	36	56.25
CCDC79	0	genome.wustl.edu	37	16	66811166	66811166	+	Missense_Mutation	SNP	G	G	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	16	66811166	66811166	G	C	SNP	CCDC79	ENST00000433154	human	ensembl	74_37	-1	known	missense	c.925	p.L309V	1.000	superfamily_ARM-type_fold	pfam_SANT/Myb,superfamily_ARM-type_fold,superfamily_Homeodomain-like,superfamily_Cytokine_IL1-like,smart_SANT/Myb	-	no_errors	CCDC79	HGNC	ENSG00000249961	tier1	-	-	41	0	0.00	15	12	44.44
CARF	0	genome.wustl.edu	37	2	203848307	203848308	+	Frame_Shift_Ins	INS	-	-	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	2	203848307	203848308	-	A	INS	CARF	ENST00000320443	human	ensembl	74_37	+1	known	frame_shift_ins	c.2138_2139	p.T716fs	0.949:0.979	NULL	NULL	-	no_errors	CARF	HGNC	ENSG00000138380	tier1			65	0	0.00	19	16	45.71
ENSG00000265002	0	genome.wustl.edu	37	15	20563408	20563417	+	RNA	DEL	CCTCTCCCTT	CCTCTCCCTT	-			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	CCTCTCCCTT	CCTCTCCCTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	15	20563408	20563417	CCTCTCCCTT	-	DEL	ENSG00000265002	ENST00000581090	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.055:0.047:0.032:0.034:0.033:0.036:0.075:0.098:0.111:0.132	-	-	-	no_errors	AC026495.1	Clone_based_ensembl_gene	ENSG00000265002	tier1			NA	NA	NA	NA	NA	NA
TELO2	0	genome.wustl.edu	37	16	1545430	1545430	+	Missense_Mutation	SNP	A	A	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	16	1545430	1545430	A	T	SNP	TELO2	ENST00000262319	human	ensembl	74_37	+1	known	missense	c.419	p.Q140L	0.766	NULL	pfam_Telomere_length_regulation_dom,superfamily_ARM-type_fold	-	no_errors	TELO2	HGNC	ENSG00000100726	tier1	-	-	39	0	0.00	26	7	21.21
OR8D1	0	genome.wustl.edu	37	11	124180308	124180308	+	Missense_Mutation	SNP	C	C	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	11	124180308	124180308	C	A	SNP	OR8D1	ENST00000357821	human	ensembl	74_37	-1	known	missense	c.355	p.A119S	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8D1	HGNC	ENSG00000196341	tier1	-	-	61	0	0.00	0	14	100.00
FZD3	0	genome.wustl.edu	37	8	28385628	28385628	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	8	28385628	28385628	A	G	SNP	FZD3	ENST00000240093	human	ensembl	74_37	+1	known	missense	c.1351	p.T451A	1.000	pfam_Frizzled,pfscan_GPCR_2-like	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD3	HGNC	ENSG00000104290	tier1	-	-	30	0	0.00	14	6	30.00
VIL1	0	genome.wustl.edu	37	2	219296835	219296835	+	Missense_Mutation	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	2	219296835	219296835	G	A	SNP	VIL1	ENST00000248444	human	ensembl	74_37	+1	known	missense	c.1270	p.G424S	1.000	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	VIL1	HGNC	ENSG00000127831	tier1	-	-	25	0	0.00	10	8	44.44
TEX2	0	genome.wustl.edu	37	17	62291465	62291465	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	17	62291465	62291465	A	G	SNP	TEX2	ENST00000258991	human	ensembl	74_37	-1	known	missense	c.113	p.F38S	1.000	NULL	pfam_DUF2404	-	no_errors	TEX2	HGNC	ENSG00000136478	tier1	-	-	41	0	0.00	29	8	21.62
ENSG00000257042	0	genome.wustl.edu	37	12	28122519	28122519	+	RNA	SNP	C	C	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	12	28122519	28122519	C	A	SNP	ENSG00000257042	ENST00000538113	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-993B23.3	Clone_based_vega_gene	ENSG00000257042	tier1	-	-	85	0	0.00	44	22	33.33
TMBIM6	0	genome.wustl.edu	37	12	50156676	50156676	+	Silent	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	12	50156676	50156676	A	G	SNP	TMBIM6	ENST00000423828	human	ensembl	74_37	+1	known	silent	c.885	p.K295	1.000	NULL	pfam_Bax_inhibitor_1-related	-	no_errors	TMBIM6	HGNC	ENSG00000139644	tier1	-	-	73	0	0.00	32	19	37.25
TRIL	0	genome.wustl.edu	37	7	28996605	28996605	+	RNA	SNP	C	C	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	7	28996605	28996605	C	A	SNP	TRIL	ENST00000322982	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TRIL	HGNC	ENSG00000176734	tier1	-	-	25	0	0.00	19	11	36.67
IL26	0	genome.wustl.edu	37	12	68618939	68618939	+	Missense_Mutation	SNP	A	A	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	12	68618939	68618939	A	C	SNP	IL26	ENST00000229134	human	ensembl	74_37	-1	known	missense	c.353	p.L118W	0.056	pfam_IL-10/19/20/24/26_fam,superfamily_4_helix_cytokine-like_core	pfam_IL-10/19/20/24/26_fam,superfamily_4_helix_cytokine-like_core	-	no_errors	IL26	HGNC	ENSG00000111536	tier1	-	-	42	0	0.00	24	6	20.00
URGCP	0	genome.wustl.edu	37	7	43918207	43918207	+	Silent	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	7	43918207	43918207	C	T	SNP	URGCP	ENST00000453200	human	ensembl	74_37	-1	known	silent	c.855	p.P285	0.000	NULL	superfamily_P-loop_NTPase,prints_GTP_binding_domain	-	no_errors	URGCP	HGNC	ENSG00000106608	tier1	-	-	36	0	0.00	32	11	25.58
PORCN	0	genome.wustl.edu	37	X	48370298	48370298	+	Silent	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	X	48370298	48370298	C	T	SNP	PORCN	ENST00000326194	human	ensembl	74_37	+1	known	silent	c.348	p.D116	0.988	NULL	pfam_MBOAT_fam	-	no_errors	PORCN	HGNC	ENSG00000102312	tier1	-	-	22	0	0.00	7	4	36.36
LRRC16A	0	genome.wustl.edu	37	6	25600575	25600575	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	6	25600575	25600575	G	T	SNP	LRRC16A	ENST00000329474	human	ensembl	74_37	+1	novel	missense	c.3153	p.E1051D	0.263	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16A	HGNC	ENSG00000079691	tier1	-	-	49	0	0.00	46	4	8.00
DCAF15	0	genome.wustl.edu	37	19	14070706	14070706	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	14070706	14070706	A	G	SNP	DCAF15	ENST00000254337	human	ensembl	74_37	+1	known	missense	c.1439	p.E480G	1.000	NULL	NULL	-	no_errors	DCAF15	HGNC	ENSG00000132017	tier1	-	-	46	0	0.00	48	6	10.91
OR2M3	0	genome.wustl.edu	37	1	248366777	248366777	+	Missense_Mutation	SNP	G	G	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	248366777	248366777	G	C	SNP	OR2M3	ENST00000456743	human	ensembl	74_37	+1	known	missense	c.408	p.M136I	0.977	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M3	HGNC	ENSG00000228198	tier1	-	-	132	0	0.00	72	28	28.00
LOC100506013	0	genome.wustl.edu	37	4	165800075	165800076	+	RNA	INS	-	-	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	4	165800075	165800076	-	T	INS	LOC100506013	ENST00000507152	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.968:0.942	-	-	-	no_errors	RP11-366M4.3	Clone_based_vega_gene	ENSG00000248329	tier1			59	0	0.00	9	2	18.18
ABCA13	0	genome.wustl.edu	37	7	48427476	48427476	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	7	48427476	48427476	G	T	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	missense	c.11393	p.S3798I	0.003	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869	tier1	-	-	26	0	0.00	50	9	15.25
WDR36	0	genome.wustl.edu	37	5	110439580	110439580	+	Missense_Mutation	SNP	A	A	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	5	110439580	110439580	A	T	SNP	WDR36	ENST00000506538	human	ensembl	74_37	+1	known	missense	c.861	p.Q287H	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_SSU_processome_Utp21,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR36	HGNC	ENSG00000134987	tier1	-	-	55	0	0.00	15	12	44.44
BRCA1	0	genome.wustl.edu	37	17	41246469	41246469	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	17	41246469	41246469	C	T	SNP	BRCA1	ENST00000471181	human	ensembl	74_37	-1	known	missense	c.1079	p.C360Y	0.002	pirsf_BRCA1	pirsf_BRCA1,pfam_BRCT_dom,pfam_Znf_C3HC4_RING-type,superfamily_BRCT_dom,smart_Znf_RING,smart_BRCT_dom,prints_BRCA1,pfscan_BRCT_dom,pfscan_Znf_RING	-	no_errors	BRCA1	HGNC	ENSG00000012048	tier1	-	-	42	0	0.00	19	3	13.64
CHRD	0	genome.wustl.edu	37	3	184101126	184101126	+	Missense_Mutation	SNP	G	G	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	184101126	184101126	G	C	SNP	CHRD	ENST00000204604	human	ensembl	74_37	+1	known	missense	c.1240	p.D414H	0.998	pfam_CHRD,smart_CHRD,pirsf_Chordin,pfscan_CHRD	pfam_CHRD,pfam_VWF_C,smart_VWF_C,smart_CHRD,pirsf_Chordin,pfscan_CHRD,pfscan_VWF_C	-	no_errors	CHRD	HGNC	ENSG00000090539	tier1	-	-	85	0	0.00	47	10	17.54
DALRD3	0	genome.wustl.edu	37	3	49055208	49055209	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	49055208	49055209	CT	-	DEL	DALRD3	ENST00000341949	human	ensembl	74_37	-1	known	frame_shift_del	c.556_555	p.R185fs	0.000:0.000	NULL	pfam_DALR_anticod-bd,superfamily_tRNAsynth_1a_anticodon-bd,smart_DALR_anticod-bd	-	no_errors	DALRD3	HGNC	ENSG00000178149	tier1			87	0	0.00	47	14	22.95
EFCC1	0	genome.wustl.edu	37	3	128753020	128753020	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	128753020	128753020	A	G	SNP	EFCC1	ENST00000480450	human	ensembl	74_37	+1	novel	missense	c.1297	p.T433A	0.945	NULL	pfscan_EF_hand_dom	-	no_errors	EFCC1	HGNC	ENSG00000114654	tier1	-	-	43	0	0.00	28	12	30.00
MYOM2	0	genome.wustl.edu	37	8	2033509	2033509	+	Missense_Mutation	SNP	A	A	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	8	2033509	2033509	A	T	SNP	MYOM2	ENST00000262113	human	ensembl	74_37	+1	known	missense	c.1631	p.Y544F	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYOM2	HGNC	ENSG00000036448	tier1	-	-	56	0	0.00	23	8	25.81
PARP14	0	genome.wustl.edu	37	3	122446774	122446774	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	122446774	122446774	C	T	SNP	PARP14	ENST00000474629	human	ensembl	74_37	+1	known	missense	c.5057	p.A1686V	0.000	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	pfam_Macro_dom,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_WWE-dom,smart_Macro_dom,pfscan_Macro_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP14	HGNC	ENSG00000173193	tier1	-	-	39	0	0.00	17	3	15.00
MBNL3	0	genome.wustl.edu	37	X	131573543	131573543	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	X	131573543	131573543	C	T	SNP	MBNL3	ENST00000370853	human	ensembl	74_37	-1	known	missense	c.97	p.A33T	0.997	smart_Znf_CCCH	smart_Znf_CCCH	-	no_errors	MBNL3	HGNC	ENSG00000076770	tier1	-	-	53	0	0.00	13	3	17.65
GREB1	0	genome.wustl.edu	37	2	11765428	11765428	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	2	11765428	11765428	A	G	SNP	GREB1	ENST00000234142	human	ensembl	74_37	+1	known	missense	c.4296	p.I1432M	0.002	NULL	superfamily_P-loop_NTPase	-	no_errors	GREB1	HGNC	ENSG00000196208	tier1	-	-	50	0	0.00	22	6	21.43
GADL1	0	genome.wustl.edu	37	3	30842399	30842399	+	Missense_Mutation	SNP	C	C	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	30842399	30842399	C	G	SNP	GADL1	ENST00000282538	human	ensembl	74_37	-1	known	missense	c.1232	p.R411P	0.970	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	GADL1	HGNC	ENSG00000144644	tier1	-	-	45	0	0.00	34	9	20.93
BAIAP2L1	0	genome.wustl.edu	37	7	97984424	97984424	+	Silent	SNP	T	T	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	7	97984424	97984424	T	A	SNP	BAIAP2L1	ENST00000005260	human	ensembl	74_37	-1	known	silent	c.144	p.G48	1.000	pfam_IRSp53/MIM_homology_IMD	pfam_IRSp53/MIM_homology_IMD,pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	BAIAP2L1	HGNC	ENSG00000006453	tier1	-	-	37	0	0.00	15	13	46.43
NPR2	0	genome.wustl.edu	37	9	35799691	35799691	+	Missense_Mutation	SNP	C	C	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	9	35799691	35799691	C	A	SNP	NPR2	ENST00000342694	human	ensembl	74_37	+1	known	missense	c.950	p.A317D	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Peripla_BP_I,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_A/G_cyclase,prints_Ntpep_rcpt,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	NPR2	HGNC	ENSG00000159899	tier1	-	-	62	0	0.00	63	12	16.00
TET3	0	genome.wustl.edu	37	2	74320711	74320711	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	2	74320711	74320711	C	T	SNP	TET3	ENST00000409262	human	ensembl	74_37	+1	known	missense	c.2780	p.P927L	1.000	NULL	NULL	-	no_errors	TET3	HGNC	ENSG00000187605	tier1	-	-	48	0	0.00	1	22	95.65
TNRC18	0	genome.wustl.edu	37	7	5347940	5347940	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	7	5347940	5347940	C	T	SNP	TNRC18	ENST00000399537	human	ensembl	74_37	-1	known	missense	c.8704	p.A2902T	1.000	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	TNRC18	HGNC	ENSG00000182095	tier1	-	-	59	0	0.00	40	14	25.93
ZNF77	0	genome.wustl.edu	37	19	2944942	2944942	+	RNA	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	2944942	2944942	G	A	SNP	ZNF77	ENST00000588050	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	ZNF77	HGNC	ENSG00000175691	tier1	-	-	10	0	0.00	5	7	58.33
GPBP1L1	0	genome.wustl.edu	37	1	46106026	46106026	+	Silent	SNP	T	T	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	46106026	46106026	T	C	SNP	GPBP1L1	ENST00000290795	human	ensembl	74_37	-1	known	silent	c.600	p.K200	1.000	NULL	NULL	-	no_errors	GPBP1L1	HGNC	ENSG00000159592	tier1	-	-	104	0	0.00	19	46	70.77
FBXL4	0	genome.wustl.edu	37	6	99365506	99365506	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	6	99365506	99365506	G	T	SNP	FBXL4	ENST00000229971	human	ensembl	74_37	-1	known	missense	c.602	p.P201H	1.000	NULL	pfam_F-box_dom,superfamily_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_F-box_dom	-	no_errors	FBXL4	HGNC	ENSG00000112234	tier1	-	-	40	0	0.00	44	4	8.33
GPR158	0	genome.wustl.edu	37	10	25464562	25464562	+	Silent	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	10	25464562	25464562	G	A	SNP	GPR158	ENST00000376351	human	ensembl	74_37	+1	known	silent	c.213	p.A71	1.000	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPR158	HGNC	ENSG00000151025	tier1	-	-	25	0	0.00	15	12	44.44
DIAPH3	0	genome.wustl.edu	37	13	60566234	60566234	+	Silent	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	13	60566234	60566234	G	A	SNP	DIAPH3	ENST00000400324	human	ensembl	74_37	-1	known	silent	c.1212	p.S404	0.952	pfam_FH3_dom,superfamily_ARM-type_fold	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Drf_DAD,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DIAPH3	HGNC	ENSG00000139734	tier1	-	-	77	0	0.00	21	3	12.50
ENSG00000233145	0	genome.wustl.edu	37	X	139099820	139099820	+	RNA	SNP	A	A	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	X	139099820	139099820	A	T	SNP	ENSG00000233145	ENST00000417426	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-364B14.1	Clone_based_vega_gene	ENSG00000233145	tier1	-	-	47	0	0.00	12	9	42.86
DENND2A	0	genome.wustl.edu	37	7	140267007	140267007	+	Missense_Mutation	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	7	140267007	140267007	G	A	SNP	DENND2A	ENST00000275884	human	ensembl	74_37	-1	known	missense	c.1658	p.A553V	1.000	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND2A	HGNC	ENSG00000146966	tier1	-	-	21	0	0.00	9	3	25.00
TENM2	0	genome.wustl.edu	37	5	167630814	167630814	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	5	167630814	167630814	A	G	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	missense	c.3551	p.H1184R	1.000	superfamily_ConA-like_lec_gl_sf	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934	tier1	-	-	58	0	0.00	39	8	17.02
GPR45	0	genome.wustl.edu	37	2	105859094	105859094	+	Missense_Mutation	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	2	105859094	105859094	G	A	SNP	GPR45	ENST00000258456	human	ensembl	74_37	+1	known	missense	c.779	p.S260N	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR45	HGNC	ENSG00000135973	tier1	-	-	38	0	0.00	7	3	30.00
PARP14	0	genome.wustl.edu	37	3	122422740	122422740	+	Missense_Mutation	SNP	A	A	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	122422740	122422740	A	C	SNP	PARP14	ENST00000474629	human	ensembl	74_37	+1	known	missense	c.3233	p.K1078T	0.007	pfam_Macro_dom,smart_Macro_dom,pfscan_Macro_dom	pfam_Macro_dom,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_WWE-dom,smart_Macro_dom,pfscan_Macro_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP14	HGNC	ENSG00000173193	tier1	-	-	68	0	0.00	35	11	23.91
ENSG00000244306	0	genome.wustl.edu	37	14	19856755	19856755	+	RNA	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	14	19856755	19856755	C	T	SNP	ENSG00000244306	ENST00000551334	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	CTD-2314B22.3	Clone_based_vega_gene	ENSG00000244306	tier1	-	-	96	0	0.00	81	9	10.00
CTBP1	0	genome.wustl.edu	37	4	1209885	1209885	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	4	1209885	1209885	C	T	SNP	CTBP1	ENST00000290921	human	ensembl	74_37	-1	known	missense	c.656	p.R219H	1.000	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom,pfam_6PGDH_NADP-bd	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom,pfam_6PGDH_NADP-bd	-	no_errors	CTBP1	HGNC	ENSG00000159692	tier1	-	-	37	0	0.00	18	16	47.06
ENSG00000204038	0	genome.wustl.edu	37	10	82012576	82012576	+	Missense_Mutation	SNP	T	T	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	10	82012576	82012576	T	G	SNP	ENSG00000204038	ENST00000356374	human	ensembl	74_37	+1	known	missense	c.94	p.S32A	0.001	NULL	NULL	-	no_errors	AL359195.1	Clone_based_ensembl_gene	ENSG00000204038	tier1	-	-	35	0	0.00	21	10	32.26
CCT8L2	0	genome.wustl.edu	37	22	17073326	17073326	+	Missense_Mutation	SNP	C	C	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	22	17073326	17073326	C	A	SNP	CCT8L2	ENST00000359963	human	ensembl	74_37	-1	known	missense	c.115	p.A39S	0.018	superfamily_Cpn60/TCP-1	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1	-	no_errors	CCT8L2	HGNC	ENSG00000198445	tier1	-	-	104	0	0.00	57	17	22.67
AOC1	0	genome.wustl.edu	37	7	150554422	150554422	+	Silent	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	7	150554422	150554422	C	T	SNP	AOC1	ENST00000416793	human	ensembl	74_37	+1	known	silent	c.864	p.R288	0.019	superfamily_Cu_amine_oxidase_N-reg	pfam_Cu_amine_oxidase_C,pfam_Cu_amine_oxidase_N2,pfam_Cu_amine_oxidase_N3,superfamily_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_N-reg,prints_Cu_amine_oxidase	-	no_errors	AOC1	HGNC	ENSG00000002726	tier1	-	-	63	0	0.00	33	4	10.81
ABCA12	0	genome.wustl.edu	37	2	215818746	215818746	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	2	215818746	215818746	G	T	SNP	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	missense	c.6479	p.S2160Y	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452	tier1	-	-	49	0	0.00	24	4	13.79
NXPE4	0	genome.wustl.edu	37	11	114452463	114452463	+	Silent	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	11	114452463	114452463	A	G	SNP	NXPE4	ENST00000375478	human	ensembl	74_37	-1	known	silent	c.876	p.S292	0.007	NULL	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE4	HGNC	ENSG00000137634	tier1	-	-	33	0	0.00	21	7	25.00
STAG3L4	0	genome.wustl.edu	37	7	66767698	66767698	+	RNA	SNP	G	G	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	7	66767698	66767698	G	C	SNP	STAG3L4	ENST00000416602	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	STAG3L4	HGNC	ENSG00000106610	tier1	-	-	81	0	0.00	10	35	77.78
ENSG00000267353	0	genome.wustl.edu	37	19	37266689	37266690	+	RNA	INS	-	-	GACAGGGTCAAAA			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	37266689	37266690	-	GACAGGGTCAAAA	INS	ENSG00000267353	ENST00000588717	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.069:0.057	-	-	-	no_errors	CTD-2162K18.3	Clone_based_vega_gene	ENSG00000267353	tier1			NA	NA	NA	NA	NA	NA
FCRL5	0	genome.wustl.edu	37	1	157512513	157512513	+	RNA	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	157512513	157512513	G	A	SNP	FCRL5	ENST00000481082	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FCRL5	HGNC	ENSG00000143297	tier1	-	-	15	0	0.00	26	5	16.13
OR51F1	0	genome.wustl.edu	37	11	4790530	4790530	+	Silent	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	11	4790530	4790530	G	T	SNP	OR51F1	ENST00000380383	human	ensembl	74_37	-1	known	silent	c.639	p.I213	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51F1	HGNC	ENSG00000188069	tier1	-	-	46	0	0.00	23	3	11.54
CST2	0	genome.wustl.edu	37	20	23807102	23807102	+	Missense_Mutation	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	20	23807102	23807102	G	A	SNP	CST2	ENST00000304725	human	ensembl	74_37	-1	known	missense	c.196	p.R66C	0.008	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CST2	HGNC	ENSG00000170369	tier1	rs112783512	-	53	0	0.00	23	8	25.81
ZNF132	0	genome.wustl.edu	37	19	58944720	58944720	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	58944720	58944720	G	T	SNP	ZNF132	ENST00000254166	human	ensembl	74_37	-1	known	missense	c.2091	p.N697K	0.037	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF132	HGNC	ENSG00000131849	tier1	-	-	50	0	0.00	25	4	13.79
MTUS2	0	genome.wustl.edu	37	13	29933578	29933578	+	Missense_Mutation	SNP	C	C	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	13	29933578	29933578	C	A	SNP	MTUS2	ENST00000431530	human	ensembl	74_37	+1	known	missense	c.3115	p.L1039I	0.001	NULL	NULL	-	no_errors	MTUS2	HGNC	ENSG00000132938	tier1	-	-	70	0	0.00	49	23	31.94
P2RY6	0	genome.wustl.edu	37	11	73008055	73008055	+	Missense_Mutation	SNP	C	C	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	11	73008055	73008055	C	G	SNP	P2RY6	ENST00000349767	human	ensembl	74_37	+1	known	missense	c.492	p.I164M	0.220	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_P2Y6_rcpt,prints_GPCR_Rhodpsn,prints_P2Y3_rcpt,prints_Protea_act_rcpt	-	no_errors	P2RY6	HGNC	ENSG00000171631	tier1	-	-	48	0	0.00	15	6	28.57
ENSG00000242539	0	genome.wustl.edu	37	3	179115513	179115513	+	RNA	SNP	T	T	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	179115513	179115513	T	C	SNP	ENSG00000242539	ENST00000495081	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	AC007620.3	Clone_based_vega_gene	ENSG00000242539	tier1	-	-	52	0	0.00	27	11	28.95
LRRC42	0	genome.wustl.edu	37	1	54423865	54423865	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	54423865	54423865	C	T	SNP	LRRC42	ENST00000319223	human	ensembl	74_37	+1	known	missense	c.517	p.R173W	1.000	NULL	NULL	-	no_errors	LRRC42	HGNC	ENSG00000116212	tier1	-	-	55	0	0.00	37	11	22.92
OR1N1	0	genome.wustl.edu	37	9	125289383	125289383	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	9	125289383	125289383	G	T	SNP	OR1N1	ENST00000304880	human	ensembl	74_37	-1	known	missense	c.190	p.L64M	0.973	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1N1	HGNC	ENSG00000171505	tier1	-	-	67	0	0.00	0	32	100.00
DUSP27	0	genome.wustl.edu	37	1	167082993	167082993	+	Missense_Mutation	SNP	C	C	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	167082993	167082993	C	A	SNP	DUSP27	ENST00000271385	human	ensembl	74_37	+1	known	missense	c.157	p.P53T	1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP27	HGNC	ENSG00000198842	tier1	-	-	49	0	0.00	45	8	15.09
LOC441666	0	genome.wustl.edu	37	10	42832502	42832503	+	RNA	INS	-	-	TATCA			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	10	42832502	42832503	-	TATCA	INS	LOC441666	ENST00000609841	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.995:0.996	-	-	-	no_errors	RP11-313J2.1	Clone_based_vega_gene	ENSG00000215146	tier1			NA	NA	NA	NA	NA	NA
ACTG2	0	genome.wustl.edu	37	2	74140730	74140730	+	Silent	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	2	74140730	74140730	C	T	SNP	ACTG2	ENST00000345517	human	ensembl	74_37	+1	known	silent	c.570	p.L190	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTG2	HGNC	ENSG00000163017	tier1	-	-	50	0	0.00	34	4	10.53
MAGEC3	0	genome.wustl.edu	37	X	140985392	140985392	+	Nonsense_Mutation	SNP	T	T	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	X	140985392	140985392	T	A	SNP	MAGEC3	ENST00000536088	human	ensembl	74_37	+1	known	nonsense	c.954	p.Y318*	0.001	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC3	HGNC	ENSG00000165509	tier1	-	-	76	0	0.00	19	11	36.67
RPAP3	0	genome.wustl.edu	37	12	48063978	48063978	+	Missense_Mutation	SNP	A	A	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	12	48063978	48063978	A	C	SNP	RPAP3	ENST00000005386	human	ensembl	74_37	-1	known	missense	c.1438	p.S480A	0.055	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	RPAP3	HGNC	ENSG00000005175	tier1	-	-	50	0	0.00	26	9	25.71
TNRC6C	0	genome.wustl.edu	37	17	76045614	76045614	+	Silent	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	17	76045614	76045614	A	G	SNP	TNRC6C	ENST00000335749	human	ensembl	74_37	+1	known	silent	c.471	p.Q157	0.777	NULL	pfam_Argonaute_hook_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TNRC6C	HGNC	ENSG00000078687	tier1	-	-	46	0	0.00	32	9	21.95
RPL14	0	genome.wustl.edu	37	3	40503520	40503521	+	In_Frame_Ins	INS	-	-	CTGCTG			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	40503520	40503521	-	CTGCTG	INS	RPL14	ENST00000338970	human	ensembl	74_37	+1	known	in_frame_ins	c.445_446	p.153in_frame_insAA	0.019:0.022	NULL	pfam_Ribosomal_L14	-	no_errors	RPL14	HGNC	ENSG00000188846	tier1			NA	NA	NA	NA	NA	NA
HYDIN	0	genome.wustl.edu	37	16	71009037	71009037	+	Splice_Site	SNP	A	A	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	16	71009037	71009037	A	T	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	splice_site	c.4772+2	e30+2	0.995	-	-	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	-	-	19	0	0.00	8	12	60.00
PSD4	0	genome.wustl.edu	37	2	113940242	113940242	+	Missense_Mutation	SNP	T	T	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	2	113940242	113940242	T	A	SNP	PSD4	ENST00000245796	human	ensembl	74_37	+1	known	missense	c.209	p.V70E	0.002	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD4	HGNC	ENSG00000125637	tier1	-	-	49	0	0.00	12	11	47.83
LAMC3	0	genome.wustl.edu	37	9	133954554	133954554	+	Nonsense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	9	133954554	133954554	G	T	SNP	LAMC3	ENST00000361069	human	ensembl	74_37	+1	known	nonsense	c.3796	p.E1266*	0.000	NULL	pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_B_type_IV,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC3	HGNC	ENSG00000050555	tier1	-	-	51	0	0.00	15	3	16.67
PRKD3	0	genome.wustl.edu	37	2	37505106	37505106	+	Missense_Mutation	SNP	A	A	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	2	37505106	37505106	A	T	SNP	PRKD3	ENST00000234179	human	ensembl	74_37	-1	known	missense	c.1199	p.L400Q	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD3	HGNC	ENSG00000115825	tier1	-	-	53	0	0.00	8	13	61.90
CRISPLD1	0	genome.wustl.edu	37	8	75928821	75928821	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	8	75928821	75928821	C	T	SNP	CRISPLD1	ENST00000262207	human	ensembl	74_37	+1	known	missense	c.749	p.P250L	0.166	NULL	pfam_LCCL,pfam_CAP_domain,superfamily_CAP_domain,superfamily_LCCL,smart_Allrgn_V5/Tpx1,smart_LCCL,pfscan_LCCL,prints_Allrgn_V5/Tpx1	-	no_errors	CRISPLD1	HGNC	ENSG00000121005	tier1	-	-	24	0	0.00	31	6	16.22
PHLDB2	0	genome.wustl.edu	37	3	111638036	111638036	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	111638036	111638036	G	T	SNP	PHLDB2	ENST00000393925	human	ensembl	74_37	+1	known	missense	c.1837	p.D613Y	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB2	HGNC	ENSG00000144824	tier1	-	-	29	0	0.00	18	15	45.45
DLC1	0	genome.wustl.edu	37	8	12990494	12990494	+	RNA	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	8	12990494	12990494	C	T	SNP	DLC1	ENST00000515225	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.305	-	-	-	no_errors	DLC1	HGNC	ENSG00000164741	tier1	-	-	150	0	0.00	75	32	29.91
CASP8AP2	0	genome.wustl.edu	37	6	90576105	90576105	+	RNA	SNP	C	C	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	6	90576105	90576105	C	G	SNP	CASP8AP2	ENST00000237177	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.716	-	-	-	no_errors	CASP8AP2	HGNC	ENSG00000118412	tier1	-	-	28	0	0.00	10	4	28.57
CLTCL1	0	genome.wustl.edu	37	22	19187282	19187282	+	Missense_Mutation	SNP	T	T	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	22	19187282	19187282	T	C	SNP	CLTCL1	ENST00000263200	human	ensembl	74_37	-1	known	missense	c.3836	p.H1279R	1.000	pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	pfam_Clathrin_H-chain/VPS_repeat,pfam_Clathrin_H-chain_propeller_rpt,pfam_Clathrin_H-chain_linker_core,superfamily_Clathrin_H-chain_propeller_N,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	-	no_errors	CLTCL1	HGNC	ENSG00000070371	tier1	-	-	50	0	0.00	28	7	20.00
MUC12	0	genome.wustl.edu	37	7	100641798	100641798	+	Missense_Mutation	SNP	C	C	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	7	100641798	100641798	C	G	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	missense	c.7954	p.P2652A	0.002	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	31	0	0.00	28	6	17.65
KLHL7	0	genome.wustl.edu	37	7	23164369	23164369	+	Nonsense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	7	23164369	23164369	G	T	SNP	KLHL7	ENST00000339077	human	ensembl	74_37	+1	known	nonsense	c.286	p.E96*	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL7	HGNC	ENSG00000122550	tier1	-	-	41	0	0.00	46	4	8.00
CYP2A13	0	genome.wustl.edu	37	19	41599673	41599673	+	Missense_Mutation	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	41599673	41599673	G	A	SNP	CYP2A13	ENST00000330436	human	ensembl	74_37	+1	known	missense	c.970	p.E324K	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP2A13	HGNC	ENSG00000197838	tier1	-	-	62	0	0.00	29	34	53.97
RTL1	0	genome.wustl.edu	37	14	101349306	101349306	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	14	101349306	101349306	A	G	SNP	RTL1	ENST00000534062	human	ensembl	74_37	-1	known	missense	c.1820	p.F607S	0.011	NULL	pfam_Retrotrans_gag_dom,superfamily_Peptidase_aspartic_dom	-	no_errors	RTL1	HGNC	ENSG00000254656	tier1	-	-	46	0	0.00	15	13	46.43
SLC24A4	0	genome.wustl.edu	37	14	92958100	92958100	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	14	92958100	92958100	G	T	SNP	SLC24A4	ENST00000532405	human	ensembl	74_37	+1	known	missense	c.1629	p.M543I	1.000	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A4	HGNC	ENSG00000140090	tier1	-	-	43	0	0.00	16	4	20.00
DNAH17	0	genome.wustl.edu	37	17	76424543	76424543	+	Splice_Site	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	17	76424543	76424543	C	T	SNP	DNAH17	ENST00000389840	human	ensembl	74_37	-1	known	splice_site	c.12632+1	e76+1	0.000	-	-	-	no_errors	DNAH17	HGNC	ENSG00000187775	tier1	-	-	39	0	0.00	8	21	72.41
SEC14L1	0	genome.wustl.edu	37	17	75208137	75208137	+	Missense_Mutation	SNP	C	C	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	17	75208137	75208137	C	G	SNP	SEC14L1	ENST00000392476	human	ensembl	74_37	+1	known	missense	c.1717	p.P573A	1.000	superfamily_GOLD,pfscan_GOLD	pfam_PRELI/MSF1,pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,superfamily_GOLD,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD,pfscan_PRELI/MSF1	-	no_errors	SEC14L1	HGNC	ENSG00000129657	tier1	-	-	25	0	0.00	14	10	41.67
ENSG00000244306	0	genome.wustl.edu	37	14	19891350	19891350	+	RNA	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	14	19891350	19891350	G	T	SNP	ENSG00000244306	ENST00000547285	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.029	-	-	-	no_errors	CTD-2314B22.3	Clone_based_vega_gene	ENSG00000244306	tier1	-	-	15	0	0.00	18	9	33.33
KDR	0	genome.wustl.edu	37	4	55991451	55991451	+	Missense_Mutation	SNP	T	T	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	4	55991451	55991451	T	C	SNP	KDR	ENST00000263923	human	ensembl	74_37	-1	known	missense	c.10	p.K4E	0.948	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR2_rcpt	-	no_errors	KDR	HGNC	ENSG00000128052	tier1	-	-	95	0	0.00	57	13	18.31
LOC100128079	0	genome.wustl.edu	37	16	27692640	27692640	+	RNA	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	16	27692640	27692640	G	A	SNP	LOC100128079	ENST00000564893	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2049O4.1	Clone_based_vega_gene	ENSG00000261329	tier1	-	-	48	0	0.00	14	32	69.57
STOX1	0	genome.wustl.edu	37	10	70641836	70641836	+	Missense_Mutation	SNP	C	C	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	10	70641836	70641836	C	A	SNP	STOX1	ENST00000298596	human	ensembl	74_37	+1	known	missense	c.433	p.L145I	0.705	pfam_Storkhead-box_winged-helix	pfam_Storkhead-box_winged-helix	-	no_errors	STOX1	HGNC	ENSG00000165730	tier1	-	-	74	0	0.00	27	20	42.55
DBH	0	genome.wustl.edu	37	9	136521767	136521767	+	Silent	SNP	C	C	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	9	136521767	136521767	C	A	SNP	DBH	ENST00000393056	human	ensembl	74_37	+1	known	silent	c.1557	p.I519	0.121	superfamily_PHM/PNGase_F_dom	pfam_Cu2_ascorb_mOase_N,pfam_DOMON_domain,superfamily_PHM/PNGase_F_dom,smart_DOMON_domain,pfscan_DOMON_domain,prints_Dopamine_b_mOase	-	no_errors	DBH	HGNC	ENSG00000123454	tier1	-	-	32	0	0.00	6	7	53.85
WNT6	0	genome.wustl.edu	37	2	219724739	219724739	+	RNA	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	2	219724739	219724739	G	A	SNP	WNT6	ENST00000486233	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	WNT6	HGNC	ENSG00000115596	tier1	-	-	9	0	0.00	4	6	60.00
ZNF230	0	genome.wustl.edu	37	19	44514467	44514467	+	Silent	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	44514467	44514467	C	T	SNP	ZNF230	ENST00000429154	human	ensembl	74_37	+1	known	silent	c.276	p.C92	0.015	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF230	HGNC	ENSG00000159882	tier1	-	-	40	0	0.00	33	4	10.81
BAAT	0	genome.wustl.edu	37	9	104124900	104124900	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	9	104124900	104124900	G	T	SNP	BAAT	ENST00000259407	human	ensembl	74_37	-1	known	missense	c.1067	p.S356Y	0.923	pfam_BAAT_C,pirsf_Acyl-CoA_thioEstase_long-chain	pfam_BAAT_C,pfam_Thio_Ohase/aa_AcTrfase,pirsf_Acyl-CoA_thioEstase_long-chain	-	no_errors	BAAT	HGNC	ENSG00000136881	tier1	-	-	46	0	0.00	20	3	13.04
ZNF324B	0	genome.wustl.edu	37	19	58967495	58967495	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	58967495	58967495	A	G	SNP	ZNF324B	ENST00000336614	human	ensembl	74_37	+1	known	missense	c.1184	p.K395R	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF324B	HGNC	ENSG00000249471	tier1	-	-	90	0	0.00	65	20	23.53
CHMP7	0	genome.wustl.edu	37	8	23116317	23116317	+	Nonsense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	8	23116317	23116317	G	T	SNP	CHMP7	ENST00000313219	human	ensembl	74_37	+1	known	nonsense	c.1033	p.E345*	1.000	pfam_Snf7	pfam_Snf7	-	no_errors	CHMP7	HGNC	ENSG00000147457	tier1	-	-	34	0	0.00	32	4	11.11
CFH	0	genome.wustl.edu	37	1	196694299	196694299	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	196694299	196694299	G	T	SNP	CFH	ENST00000367429	human	ensembl	74_37	+1	known	missense	c.1745	p.R582L	0.005	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFH	HGNC	ENSG00000000971	tier1	-	-	20	0	0.00	14	13	48.15
ENSG00000273433	0	genome.wustl.edu	37	7	27192088	27192089	+	RNA	INS	-	-	GGCCT			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	7	27192088	27192089	-	GGCCT	INS	ENSG00000273433	ENST00000467897	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.007:0.074	-	-	-	no_errors	RP1-170O19.22	Clone_based_vega_gene	ENSG00000273433	tier1			NA	NA	NA	NA	NA	NA
PLXNA1	0	genome.wustl.edu	37	3	126708266	126708266	+	Missense_Mutation	SNP	T	T	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	126708266	126708266	T	A	SNP	PLXNA1	ENST00000393409	human	ensembl	74_37	+1	known	missense	c.830	p.F277Y	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA1	HGNC	ENSG00000114554	tier1	-	-	29	0	0.00	18	9	33.33
C1orf74	0	genome.wustl.edu	37	1	209956204	209956204	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	209956204	209956204	G	T	SNP	C1orf74	ENST00000294811	human	ensembl	74_37	-1	known	missense	c.776	p.S259Y	0.001	NULL	NULL	-	no_errors	C1orf74	HGNC	ENSG00000162757	tier1	-	-	28	0	0.00	19	3	13.64
DAPK1	0	genome.wustl.edu	37	9	90113931	90113931	+	RNA	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	9	90113931	90113931	G	T	SNP	DAPK1	ENST00000472344	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.974	-	-	-	no_errors	DAPK1	HGNC	ENSG00000196730	tier1	-	-	64	0	0.00	25	4	13.79
ASH1L	0	genome.wustl.edu	37	1	155447818	155447818	+	Frame_Shift_Del	DEL	T	T	-			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	155447818	155447818	T	-	DEL	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	frame_shift_del	c.4843	p.R1615fs	1.000	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539	tier1			51	0	0.00	57	12	17.39
ZNF469	0	genome.wustl.edu	37	16	88500498	88500498	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	16	88500498	88500498	A	G	SNP	ZNF469	ENST00000437464	human	ensembl	74_37	+1	known	missense	c.6536	p.K2179R	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF469	HGNC	ENSG00000225614	tier1	-	-	125	0	0.00	19	33	63.46
PCOLCE2	0	genome.wustl.edu	37	3	142607822	142607823	+	RNA	INS	-	-	GCTCACACTGGCAGCAGCGCTG			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	142607822	142607823	-	GCTCACACTGGCAGCAGCGCTG	INS	PCOLCE2	ENST00000461818	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	PCOLCE2	HGNC	ENSG00000163710	tier1			NA	NA	NA	NA	NA	NA
C22orf29	0	genome.wustl.edu	37	22	19839598	19839598	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	22	19839598	19839598	C	T	SNP	C22orf29	ENST00000328554	human	ensembl	74_37	-1	known	missense	c.187	p.E63K	0.984	NULL	NULL	-	no_errors	C22orf29	HGNC	ENSG00000215012	tier1	-	-	40	0	0.00	41	4	8.89
FTCD	0	genome.wustl.edu	37	21	47570376	47570376	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	21	47570376	47570376	C	T	SNP	FTCD	ENST00000359679	human	ensembl	74_37	-1	known	missense	c.700	p.V234M	1.000	pfam_Formiminotransferase_C,superfamily_FormiminoTrfase_N/C_subdom,tigrfam_Formiminotransferase_cat	pfam_Formiminotransferase_N,pfam_Formiminotransferase_C,pfam_Cyclodeamin/CycHdrlase,superfamily_FormiminoTrfase_N/C_subdom,superfamily_Cyclodeamin/CycHdrlase,tigrfam_Formiminotransferase_cat	-	no_errors	FTCD	HGNC	ENSG00000160282	tier1	-	-	74	0	0.00	22	39	63.93
NBEAL2	0	genome.wustl.edu	37	3	47045620	47045620	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	47045620	47045620	C	T	SNP	NBEAL2	ENST00000450053	human	ensembl	74_37	+1	known	missense	c.5935	p.R1979W	1.000	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL2	HGNC	ENSG00000160796	tier1	-	-	41	0	0.00	19	8	29.63
CSMD2	0	genome.wustl.edu	37	1	34174865	34174865	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	34174865	34174865	A	G	SNP	CSMD2	ENST00000373380	human	ensembl	74_37	-1	known	missense	c.19	p.F7L	0.996	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	tier1	-	-	35	0	0.00	16	7	30.43
NOX1	0	genome.wustl.edu	37	X	100104368	100104368	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	X	100104368	100104368	G	T	SNP	NOX1	ENST00000372966	human	ensembl	74_37	-1	known	missense	c.1344	p.F448L	0.986	pfam_Fe_red_NAD-bd_6	pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	-	no_errors	NOX1	HGNC	ENSG00000007952	tier1	-	-	47	0	0.00	23	3	11.11
LRRIQ3	0	genome.wustl.edu	37	1	74540395	74540395	+	Missense_Mutation	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	74540395	74540395	G	A	SNP	LRRIQ3	ENST00000354431	human	ensembl	74_37	-1	known	missense	c.947	p.P316L	0.960	NULL	pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ3	HGNC	ENSG00000162620	tier1	-	-	55	0	0.00	18	38	67.86
POLR1E	0	genome.wustl.edu	37	9	37486117	37486117	+	Missense_Mutation	SNP	C	C	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	9	37486117	37486117	C	G	SNP	POLR1E	ENST00000377798	human	ensembl	74_37	+1	known	missense	c.73	p.L25V	0.997	NULL	pfam_RNA_pol-assoc_fac_A49-like	-	no_errors	POLR1E	HGNC	ENSG00000137054	tier1	-	-	153	0	0.00	155	30	16.22
KRT16P2	0	genome.wustl.edu	37	17	16735609	16735609	+	RNA	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	17	16735609	16735609	A	G	SNP	KRT16P2	ENST00000579062	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	KRT16P2	HGNC	ENSG00000227300	tier1	-	-	289	0	0.00	172	31	15.27
BAZ1A	0	genome.wustl.edu	37	14	35233923	35233923	+	Missense_Mutation	SNP	C	C	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	14	35233923	35233923	C	G	SNP	BAZ1A	ENST00000360310	human	ensembl	74_37	-1	known	missense	c.3766	p.E1256Q	1.000	NULL	pfam_WSTF_Acf1_Cbp146,pfam_Bromodomain,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_WSTF_Acf1_Cbp146,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ1A	HGNC	ENSG00000198604	tier1	-	-	38	0	0.00	12	19	61.29
MSANTD2	0	genome.wustl.edu	37	11	124670195	124670195	+	Missense_Mutation	SNP	G	G	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	11	124670195	124670195	G	C	SNP	MSANTD2	ENST00000374979	human	ensembl	74_37	-1	known	missense	c.82	p.P28A	1.000	NULL	NULL	-	no_errors	MSANTD2	HGNC	ENSG00000120458	tier1	-	-	83	0	0.00	24	4	14.29
THRB	0	genome.wustl.edu	37	3	24164570	24164570	+	Silent	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	24164570	24164570	A	G	SNP	THRB	ENST00000356447	human	ensembl	74_37	-1	known	silent	c.1191	p.D397	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_ThyrH_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	THRB	HGNC	ENSG00000151090	tier1	-	-	79	0	0.00	79	9	10.23
ZNF81	0	genome.wustl.edu	37	X	47774883	47774883	+	Missense_Mutation	SNP	G	G	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	X	47774883	47774883	G	C	SNP	ZNF81	ENST00000338637	human	ensembl	74_37	+1	known	missense	c.838	p.G280R	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF81	HGNC	ENSG00000197779	tier1	-	-	102	0	0.00	70	23	24.21
SYCP3	0	genome.wustl.edu	37	12	102122971	102122971	+	Missense_Mutation	SNP	C	C	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	12	102122971	102122971	C	G	SNP	SYCP3	ENST00000266743	human	ensembl	74_37	-1	known	missense	c.573	p.K191N	0.982	pfam_Cor1/Xlr/Xmr	pfam_Cor1/Xlr/Xmr	-	no_errors	SYCP3	HGNC	ENSG00000139351	tier1	-	-	32	0	0.00	22	10	31.25
ENSG00000232274	0	genome.wustl.edu	37	1	143210195	143210195	+	RNA	SNP	T	T	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	143210195	143210195	T	C	SNP	ENSG00000232274	ENST00000412204	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-782C8.2	Clone_based_vega_gene	ENSG00000232274	tier1	-	-	215	0	0.00	180	38	17.43
PDE4C	0	genome.wustl.edu	37	19	18327583	18327583	+	Nonsense_Mutation	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	18327583	18327583	G	A	SNP	PDE4C	ENST00000355502	human	ensembl	74_37	-1	known	nonsense	c.1453	p.R485*	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE4C	HGNC	ENSG00000105650	tier1	-	-	44	0	0.00	25	24	48.98
FSCB	0	genome.wustl.edu	37	14	44974526	44974526	+	Silent	SNP	A	A	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	14	44974526	44974526	A	T	SNP	FSCB	ENST00000340446	human	ensembl	74_37	-1	known	silent	c.1665	p.A555	0.000	NULL	NULL	-	no_errors	FSCB	HGNC	ENSG00000189139	tier1	-	-	53	0	0.00	12	20	62.50
NYNRIN	0	genome.wustl.edu	37	14	24884111	24884111	+	Silent	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	14	24884111	24884111	G	A	SNP	NYNRIN	ENST00000382554	human	ensembl	74_37	+1	known	silent	c.3156	p.L1052	0.107	NULL	pfam_RNase_Zc3h12,superfamily_RNaseH-like_dom,pfscan_Integrase_cat-core	-	no_errors	NYNRIN	HGNC	ENSG00000205978	tier1	-	-	39	0	0.00	34	4	10.53
WDR36	0	genome.wustl.edu	37	5	110439579	110439579	+	Missense_Mutation	SNP	A	A	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	5	110439579	110439579	A	C	SNP	WDR36	ENST00000506538	human	ensembl	74_37	+1	known	missense	c.860	p.Q287P	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_SSU_processome_Utp21,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR36	HGNC	ENSG00000134987	tier1	-	-	58	0	0.00	15	12	44.44
CUBN	0	genome.wustl.edu	37	10	16979734	16979734	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	10	16979734	16979734	C	T	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.5783	p.G1928D	0.999	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611	tier1	-	-	63	0	0.00	14	24	63.16
GOLGB1	0	genome.wustl.edu	37	3	121416305	121416305	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	121416305	121416305	G	T	SNP	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	missense	c.3050	p.A1017D	1.000	NULL	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230	tier1	-	-	47	0	0.00	24	3	11.11
FSCB	0	genome.wustl.edu	37	14	44975616	44975616	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	14	44975616	44975616	G	T	SNP	FSCB	ENST00000340446	human	ensembl	74_37	-1	known	missense	c.575	p.A192D	0.000	NULL	NULL	-	no_errors	FSCB	HGNC	ENSG00000189139	tier1	-	-	74	0	0.00	30	3	9.09
RNF130	0	genome.wustl.edu	37	5	179397430	179397431	+	Frame_Shift_Ins	INS	-	-	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	5	179397430	179397431	-	T	INS	RNF130	ENST00000521389	human	ensembl	74_37	-1	known	frame_shift_ins	c.925_924	p.L308fs	1.000:1.000	NULL	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF130	HGNC	ENSG00000113269	tier1			52	0	0.00	14	2	12.50
TSPEAR	0	genome.wustl.edu	37	21	45953680	45953680	+	Nonsense_Mutation	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	21	45953680	45953680	G	A	SNP	TSPEAR	ENST00000323084	human	ensembl	74_37	-1	known	nonsense	c.430	p.R144*	0.101	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_EPTP,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_EAR	-	no_errors	TSPEAR	HGNC	ENSG00000175894	tier1	-	-	67	0	0.00	16	57	77.03
CSNK1G2-AS1	0	genome.wustl.edu	37	19	1953888	1953888	+	RNA	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	1953888	1953888	G	A	SNP	CSNK1G2-AS1	ENST00000314315	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	CSNK1G2-AS1	HGNC	ENSG00000180846	tier1	-	-	20	0	0.00	32	22	40.74
OR51J1	0	genome.wustl.edu	37	11	5424660	5424660	+	Missense_Mutation	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	11	5424660	5424660	G	A	SNP	OR51J1	ENST00000332043	human	ensembl	74_37	+1	known	missense	c.834	p.M278I	0.994	pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	OR51J1	HGNC	ENSG00000184321	tier1	-	-	64	0	0.00	10	18	62.07
EPRS	0	genome.wustl.edu	37	1	220213589	220213589	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	220213589	220213589	G	T	SNP	EPRS	ENST00000366923	human	ensembl	74_37	-1	known	missense	c.69	p.H23Q	0.997	NULL	pfam_Glu/Gln-tRNA-synth_Ib_cat-dom,pfam_WHEP-TRS,pfam_Glu/Gln-tRNA-synth_Ib_codon-bd,pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Pro-tRNA_ligase_II_C,pfam_Anticodon-bd,superfamily_Ribosomal_L25/Gln-tRNA_synth,superfamily_Anticodon-bd,superfamily_Pro-tRNA_synth_II,superfamily_S15_NS1_RNA-bd,superfamily_Glutathione-S-Trfase_C-like,smart_Pro-tRNA_ligase_II_C,prints_Glu/Gln-tRNA-synth,prints_Pro-tRNA-ligase_IIa,pfscan_aa-tRNA-synth_II,pfscan_WHEP-TRS,tigrfam_Pro-tRNA-ligase_IIa_arc-type,tigrfam_Glu-tRNA-synth_arc/euk	-	no_errors	EPRS	HGNC	ENSG00000136628	tier1	-	-	41	0	0.00	18	3	14.29
RPL36	0	genome.wustl.edu	37	19	5691405	5691405	+	Missense_Mutation	SNP	G	G	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	5691405	5691405	G	C	SNP	RPL36	ENST00000347512	human	ensembl	74_37	+1	known	missense	c.169	p.A57P	0.995	pfam_Ribosomal_L36e	pfam_Ribosomal_L36e	-	no_errors	RPL36	HGNC	ENSG00000130255	tier1	-	-	99	0	0.00	55	14	20.29
ATR	0	genome.wustl.edu	37	3	142278275	142278275	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	142278275	142278275	A	G	SNP	ATR	ENST00000350721	human	ensembl	74_37	-1	known	missense	c.1550	p.F517S	0.686	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_PIK-rel_kinase_FAT,pfam_UME,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_UME,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_HEAT_type_2,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATR	HGNC	ENSG00000175054	tier1	-	-	22	0	0.00	14	7	33.33
KDM5B	0	genome.wustl.edu	37	1	202702842	202702842	+	Missense_Mutation	SNP	A	A	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	202702842	202702842	A	T	SNP	KDM5B	ENST00000367264	human	ensembl	74_37	-1	known	missense	c.3704	p.F1235Y	1.000	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5B	HGNC	ENSG00000117139	tier1	-	-	33	0	0.00	24	10	29.41
MYOM2	0	genome.wustl.edu	37	8	2092920	2092920	+	RNA	DEL	C	C	-			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	8	2092920	2092920	C	-	DEL	MYOM2	ENST00000520298	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MYOM2	HGNC	ENSG00000036448	tier1			49	0	0.00	14	9	39.13
BRIP1	0	genome.wustl.edu	37	17	59761175	59761175	+	Missense_Mutation	SNP	T	T	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	17	59761175	59761175	T	C	SNP	BRIP1	ENST00000259008	human	ensembl	74_37	-1	known	missense	c.3232	p.K1078E	0.031	NULL	pfam_DEAD_2,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_TIL_dom,smart_Helicase-like_DEXD_c2,smart_Helicase_ATP-bd,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	BRIP1	HGNC	ENSG00000136492	tier1	-	-	32	0	0.00	38	13	25.49
PRR3	0	genome.wustl.edu	37	6	30531427	30531428	+	RNA	INS	-	-	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	6	30531427	30531428	-	T	INS	PRR3	ENST00000481741	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.021:0.005	-	-	-	no_errors	PRR3	HGNC	ENSG00000204576	tier1			25	0	0.00	27	6	18.18
LAMC3	0	genome.wustl.edu	37	9	133967312	133967313	+	RNA	INS	-	-	CC			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	9	133967312	133967313	-	CC	INS	LAMC3	ENST00000462567	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	LAMC3	HGNC	ENSG00000050555	tier1			36	0	0.00	28	4	12.50
ZNF324B	0	genome.wustl.edu	37	19	58967494	58967494	+	Nonsense_Mutation	SNP	A	A	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	58967494	58967494	A	T	SNP	ZNF324B	ENST00000336614	human	ensembl	74_37	+1	known	nonsense	c.1183	p.K395*	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF324B	HGNC	ENSG00000249471	tier1	-	-	90	0	0.00	64	21	24.71
OTOP3	0	genome.wustl.edu	37	17	72939701	72939701	+	Missense_Mutation	SNP	G	G	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	17	72939701	72939701	G	T	SNP	OTOP3	ENST00000328801	human	ensembl	74_37	+1	known	missense	c.687	p.R229S	1.000	NULL	pfam_Otopetrin	-	no_errors	OTOP3	HGNC	ENSG00000182938	tier1	-	-	43	0	0.00	37	11	22.92
SYNE1	0	genome.wustl.edu	37	6	152652933	152652933	+	Missense_Mutation	SNP	T	T	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	6	152652933	152652933	T	C	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.12887	p.K4296R	1.000	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	46	0	0.00	34	17	33.33
LOC100129029	0	genome.wustl.edu	37	2	159517119	159517119	+	RNA	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	2	159517119	159517119	A	G	SNP	LOC100129029	ENST00000342892	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC005042.4	Clone_based_vega_gene	ENSG00000204380	tier1	-	-	32	0	0.00	12	9	42.86
DBF4	0	genome.wustl.edu	37	7	87536511	87536512	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	7	87536511	87536512	AC	-	DEL	DBF4	ENST00000265728	human	ensembl	74_37	+1	known	frame_shift_del	c.1058_1059	p.Y353fs	1.000:0.998	NULL	pfam_Znf_DBF,superfamily_BRCT_dom,smart_Znf_DBF	-	no_errors	DBF4	HGNC	ENSG00000006634	tier1			62	0	0.00	24	30	55.56
MYO7B	0	genome.wustl.edu	37	2	128327409	128327409	+	Silent	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	2	128327409	128327409	G	A	SNP	MYO7B	ENST00000389524	human	ensembl	74_37	+1	known	silent	c.516	p.L172	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_Band_41_domain,smart_SH3_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_SH3_domain,prints_Myosin_head_motor_dom	-	no_errors	MYO7B	HGNC	ENSG00000169994	tier1	-	-	51	0	0.00	16	4	20.00
ACAT1	0	genome.wustl.edu	37	11	108010820	108010820	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	11	108010820	108010820	A	G	SNP	ACAT1	ENST00000265838	human	ensembl	74_37	+1	known	missense	c.608	p.K203R	1.000	pfam_Thiolase_N,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	pfam_Thiolase_N,pfam_Thiolase_C,pfam_Ketoacyl_synth_N,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	-	no_errors	ACAT1	HGNC	ENSG00000075239	tier1	-	-	42	0	0.00	11	8	42.11
SMG1	0	genome.wustl.edu	37	16	18859200	18859200	+	Missense_Mutation	SNP	G	G	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	16	18859200	18859200	G	C	SNP	SMG1	ENST00000389467	human	ensembl	74_37	-1	known	missense	c.5779	p.Q1927E	1.000	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	SMG1	HGNC	ENSG00000157106	tier1	-	-	65	0	0.00	54	13	19.40
SAMD3	0	genome.wustl.edu	37	6	130530730	130530730	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	6	130530730	130530730	C	T	SNP	SAMD3	ENST00000368134	human	ensembl	74_37	-1	known	missense	c.293	p.S98N	0.059	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD3	HGNC	ENSG00000164483	tier1	-	-	40	0	0.00	31	4	11.43
PRDM16	0	genome.wustl.edu	37	1	3301765	3301765	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	3301765	3301765	C	T	SNP	PRDM16	ENST00000270722	human	ensembl	74_37	+1	known	missense	c.488	p.A163V	0.014	smart_SET_dom,pfscan_SET_dom	pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM16	HGNC	ENSG00000142611	tier1	rs201182055	-	37	0	0.00	12	3	20.00
HDAC3	0	genome.wustl.edu	37	5	141016128	141016128	+	Missense_Mutation	SNP	T	T	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	5	141016128	141016128	T	C	SNP	HDAC3	ENST00000305264	human	ensembl	74_37	-1	known	missense	c.125	p.Y42C	1.000	pfam_His_deacetylse_dom,pirsf_His_deacetylse_1	pfam_His_deacetylse_dom,pirsf_His_deacetylse_1,prints_His_deacetylse_1,prints_His_deacetylse	-	no_errors	HDAC3	HGNC	ENSG00000171720	tier1	-	-	184	0	0.00	100	71	41.52
WDR87	0	genome.wustl.edu	37	19	38378202	38378202	+	Missense_Mutation	SNP	T	T	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	38378202	38378202	T	C	SNP	WDR87	ENST00000447313	human	ensembl	74_37	-1	known	missense	c.6109	p.M2037V	0.000	superfamily_ARM-type_fold	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,superfamily_Quinolinate_PRibosylTrfase_C,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR87	HGNC	ENSG00000171804	tier1	-	-	51	0	0.00	41	15	26.79
DTD2	0	genome.wustl.edu	37	14	31917348	31917348	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	14	31917348	31917348	A	G	SNP	DTD2	ENST00000310850	human	ensembl	74_37	-1	known	missense	c.494	p.L165S	0.923	pfam_DTyrtRNA_deacyls,superfamily_DTD-like_dom	pfam_DTyrtRNA_deacyls,superfamily_DTD-like_dom	-	no_errors	DTD2	HGNC	ENSG00000129480	tier1	-	-	64	0	0.00	37	9	19.57
DTX4	0	genome.wustl.edu	37	11	58956718	58956718	+	Missense_Mutation	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	11	58956718	58956718	G	A	SNP	DTX4	ENST00000227451	human	ensembl	74_37	+1	known	missense	c.1081	p.V361I	0.999	NULL	pfam_WWE-dom,pfam_Znf_C3HC4_RING-type,smart_WWE-dom_subgr,smart_Znf_RING,pfscan_WWE-dom,pfscan_Znf_RING	-	no_errors	DTX4	HGNC	ENSG00000110042	tier1	-	-	55	0	0.00	29	17	36.96
NR2E1	0	genome.wustl.edu	37	6	108489261	108489261	+	Nonsense_Mutation	SNP	A	A	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	6	108489261	108489261	A	T	SNP	NR2E1	ENST00000368983	human	ensembl	74_37	+1	novel	nonsense	c.31	p.K11*	0.689	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR2E1	HGNC	ENSG00000112333	tier1	-	-	87	0	0.00	77	20	20.41
LONP1	0	genome.wustl.edu	37	19	5707147	5707147	+	Missense_Mutation	SNP	T	T	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	5707147	5707147	T	G	SNP	LONP1	ENST00000360614	human	ensembl	74_37	-1	known	missense	c.1070	p.K357T	1.000	pfam_Pept_S16_N,smart_Pept_S16_N,tigrfam_Lon_bac/euk-typ	pfam_Pept_S16_C,pfam_Pept_S16_N,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_Prk_AAA_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_P-loop_NTPase,superfamily_PUA-like_domain,smart_Pept_S16_N,smart_AAA+_ATPase,tigrfam_Lon_bac/euk-typ	-	no_errors	LONP1	HGNC	ENSG00000196365	tier1	-	-	131	0	0.00	83	33	28.45
BAI1	0	genome.wustl.edu	37	8	143558855	143558855	+	Missense_Mutation	SNP	C	C	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	8	143558855	143558855	C	A	SNP	BAI1	ENST00000323289	human	ensembl	74_37	+1	known	missense	c.1332	p.N444K	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_GPCR_2_secretin-like,pfam_Thrombospondin_1_rpt,pfam_DUF3497,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	BAI1	HGNC	ENSG00000181790	tier1	-	-	73	0	0.00	22	31	58.49
MXRA5	0	genome.wustl.edu	37	X	3238224	3238224	+	Silent	SNP	T	T	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	X	3238224	3238224	T	A	SNP	MXRA5	ENST00000217939	human	ensembl	74_37	-1	known	silent	c.5502	p.S1834	0.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MXRA5	HGNC	ENSG00000101825	tier1	-	-	61	0	0.00	49	32	39.51
PTPRF	0	genome.wustl.edu	37	1	44035396	44035396	+	Missense_Mutation	SNP	T	T	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	44035396	44035396	T	C	SNP	PTPRF	ENST00000359947	human	ensembl	74_37	+1	known	missense	c.515	p.F172S	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRF	HGNC	ENSG00000142949	tier1	-	-	34	0	0.00	16	11	40.74
PDZK1	0	genome.wustl.edu	37	1	145761266	145761266	+	Missense_Mutation	SNP	T	T	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	145761266	145761266	T	C	SNP	PDZK1	ENST00000344770	human	ensembl	74_37	+1	known	missense	c.1079	p.L360P	0.001	superfamily_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZK1	HGNC	ENSG00000174827	tier1	-	-	214	0	0.00	155	31	16.67
EFCAB13	0	genome.wustl.edu	37	17	45518000	45518000	+	Nonsense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	17	45518000	45518000	C	T	SNP	EFCAB13	ENST00000331493	human	ensembl	74_37	+1	known	nonsense	c.2842	p.Q948*	0.062	NULL	NULL	-	no_errors	EFCAB13	HGNC	ENSG00000178852	tier1	-	-	59	0	0.00	33	33	50.00
MDN1	0	genome.wustl.edu	37	6	90448117	90448117	+	Missense_Mutation	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	6	90448117	90448117	G	A	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	missense	c.4651	p.R1551C	1.000	superfamily_P-loop_NTPase,pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159	tier1	-	-	80	0	0.00	30	28	48.28
UMPS	0	genome.wustl.edu	37	3	124457073	124457073	+	Silent	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	3	124457073	124457073	A	G	SNP	UMPS	ENST00000232607	human	ensembl	74_37	+1	known	silent	c.969	p.K323	1.000	pfam_OMPdeCOase_dom,superfamily_RibuloseP-bd_barrel,smart_OMPdeCOase_dom,tigrfam_OMPdecase	pfam_OMPdeCOase_dom,pfam_PRibTrfase_dom,superfamily_RibuloseP-bd_barrel,smart_OMPdeCOase_dom,tigrfam_OMPdecase,tigrfam_Or_phspho_trans_dom	-	no_errors	UMPS	HGNC	ENSG00000114491	tier1	-	-	12	0	0.00	8	6	42.86
SYT16	0	genome.wustl.edu	37	14	62567381	62567381	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	14	62567381	62567381	A	G	SNP	SYT16	ENST00000430451	human	ensembl	74_37	+1	novel	missense	c.1894	p.K632E	0.974	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYT16	HGNC	ENSG00000139973	tier1	-	-	61	0	0.00	18	9	33.33
ATP10B	0	genome.wustl.edu	37	5	159992464	159992464	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	5	159992464	159992464	A	G	SNP	ATP10B	ENST00000327245	human	ensembl	74_37	-1	known	missense	c.4382	p.I1461T	1.000	NULL	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10B	HGNC	ENSG00000118322	tier1	-	-	51	0	0.00	24	3	11.11
AHNAK	0	genome.wustl.edu	37	11	62297347	62297347	+	Missense_Mutation	SNP	T	T	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	11	62297347	62297347	T	A	SNP	AHNAK	ENST00000378024	human	ensembl	74_37	-1	known	missense	c.4542	p.K1514N	0.993	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942	tier1	-	-	134	0	0.00	69	21	23.33
ZNF560	0	genome.wustl.edu	37	19	9578410	9578410	+	Missense_Mutation	SNP	C	C	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	19	9578410	9578410	C	G	SNP	ZNF560	ENST00000301480	human	ensembl	74_37	-1	known	missense	c.1213	p.G405R	0.001	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF560	HGNC	ENSG00000198028	tier1	-	-	29	0	0.00	19	7	26.92
MDN1	0	genome.wustl.edu	37	6	90402695	90402695	+	Nonsense_Mutation	SNP	G	G	A			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	6	90402695	90402695	G	A	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	nonsense	c.10054	p.Q3352*	1.000	pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159	tier1	-	-	38	0	0.00	45	4	8.16
HIVEP3	0	genome.wustl.edu	37	1	42046979	42046979	+	Missense_Mutation	SNP	A	A	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	1	42046979	42046979	A	G	SNP	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	missense	c.3490	p.S1164P	0.988	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124	tier1	rs187400091	GMAF=0.0005	91	0	0.00	45	14	23.73
CYP27A1	0	genome.wustl.edu	37	2	219647127	219647127	+	Silent	SNP	T	T	G			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	2	219647127	219647127	T	G	SNP	CYP27A1	ENST00000258415	human	ensembl	74_37	+1	known	silent	c.222	p.V74	0.091	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	-	no_errors	CYP27A1	HGNC	ENSG00000135929	tier1	-	-	47	0	0.00	15	9	36.00
OR5AK2	0	genome.wustl.edu	37	11	56757027	56757027	+	Silent	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	11	56757027	56757027	C	T	SNP	OR5AK2	ENST00000326855	human	ensembl	74_37	+1	known	silent	c.639	p.V213	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5AK2	HGNC	ENSG00000181273	tier1	-	-	95	0	0.00	40	29	42.03
CLTC	0	genome.wustl.edu	37	17	57743601	57743601	+	Missense_Mutation	SNP	A	A	C			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	17	57743601	57743601	A	C	SNP	CLTC	ENST00000269122	human	ensembl	74_37	+1	known	missense	c.1782	p.Q594H	1.000	pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	pfam_Clathrin_H-chain/VPS_repeat,pfam_Clathrin_H-chain_propeller_rpt,pfam_Clathrin_H-chain_linker_core,superfamily_Clathrin_H-chain_propeller_N,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	-	no_errors	CLTC	HGNC	ENSG00000141367	tier1	-	-	60	0	0.00	41	29	41.43
CRISPLD1	0	genome.wustl.edu	37	8	75928896	75928896	+	Missense_Mutation	SNP	C	C	T			TCGA-WP-A9GB-01A-11D-A37C-09	TCGA-WP-A9GB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8abdeb14-fa39-4bbc-8181-7196573b2629	765fa923-05c1-4fbe-a8dc-ba3c987c84d5	8	75928896	75928896	C	T	SNP	CRISPLD1	ENST00000262207	human	ensembl	74_37	+1	known	missense	c.824	p.S275L	0.998	NULL	pfam_LCCL,pfam_CAP_domain,superfamily_CAP_domain,superfamily_LCCL,smart_Allrgn_V5/Tpx1,smart_LCCL,pfscan_LCCL,prints_Allrgn_V5/Tpx1	-	no_errors	CRISPLD1	HGNC	ENSG00000121005	tier1	-	-	35	0	0.00	43	6	12.24
