Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
UBR5	0	genome.wustl.edu	37	8	103323643	103323643	+	Missense_Mutation	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	8	103323643	103323643	C	T	SNP	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	missense	c.2500	p.D834N	1.000	NULL	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517	tier1	-	-	66	0	0.00	22	3	12.00
PLEKHH1	0	genome.wustl.edu	37	14	68038952	68038952	+	Missense_Mutation	SNP	G	G	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	14	68038952	68038952	G	T	SNP	PLEKHH1	ENST00000329153	human	ensembl	74_37	+1	known	missense	c.1686	p.Q562H	1.000	NULL	pfam_Pleckstrin_homology,pfam_MyTH4_dom,pfam_FERM_central,superfamily_FERM_central,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEKHH1	HGNC	ENSG00000054690	tier1	-	-	97	0	0.00	30	4	11.76
MALAT1	0	genome.wustl.edu	37	11	65268614	65268614	+	RNA	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	11	65268614	65268614	C	T	SNP	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562	tier1	-	-	43	0	0.00	23	21	47.73
UFL1	0	genome.wustl.edu	37	6	96969559	96969578	+	RNA	DEL	AACCCCCAGCGCCGCGGTAC	AACCCCCAGCGCCGCGGTAC	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	AACCCCCAGCGCCGCGGTAC	AACCCCCAGCGCCGCGGTAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	6	96969559	96969578	AACCCCCAGCGCCGCGGTAC	-	DEL	UFL1	ENST00000461673	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.000:0.000:0.000:0.001:0.001:0.000:0.001:0.001:0.003:0.006:0.006:0.002:0.000:0.000:0.000:0.000:0.000:0.000	-	-	-	no_errors	UFL1	HGNC	ENSG00000014123	tier1			NA	NA	NA	NA	NA	NA
RARB	0	genome.wustl.edu	37	3	25622051	25622051	+	Missense_Mutation	SNP	C	C	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	3	25622051	25622051	C	A	SNP	RARB	ENST00000404969	human	ensembl	74_37	+1	known	missense	c.645	p.D215E	0.997	superfamily_Nucl_hormone_rcpt_ligand-bd,prints_Retinoic_acid_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Nuc_orph_rcpt,prints_Retinoid-X_rcpt/HNF4	-	no_errors	RARB	HGNC	ENSG00000077092	tier1	-	-	56	0	0.00	15	20	57.14
CNTNAP3B	0	genome.wustl.edu	37	9	43915500	43915500	+	Missense_Mutation	SNP	G	G	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	9	43915500	43915500	G	C	SNP	CNTNAP3B	ENST00000377564	human	ensembl	74_37	+1	known	missense	c.3583	p.G1195R	0.363	pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP3B	HGNC	ENSG00000154529	tier1	-	-	14	0	0.00	9	4	30.77
ENSG00000269604	0	genome.wustl.edu	37	19	4794948	4794949	+	RNA	INS	-	-	AACCTCAC			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	19	4794948	4794949	-	AACCTCAC	INS	ENSG00000269604	ENST00000601192	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC005523.2	Clone_based_vega_gene	ENSG00000269604	tier1			NA	NA	NA	NA	NA	NA
FLRT2	0	genome.wustl.edu	37	14	86090074	86090075	+	RNA	INS	-	-	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	14	86090074	86090075	-	A	INS	FLRT2	ENST00000553650	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	FLRT2	HGNC	ENSG00000185070	tier1			40	0	0.00	22	3	12.00
ZNF551	0	genome.wustl.edu	37	19	58199223	58199223	+	Missense_Mutation	SNP	G	G	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	19	58199223	58199223	G	A	SNP	ZNF551	ENST00000282296	human	ensembl	74_37	+1	known	missense	c.1580	p.G527D	0.911	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF551	HGNC	ENSG00000204519	tier1	-	-	75	0	0.00	27	3	10.00
MMP24	0	genome.wustl.edu	37	20	33834715	33834715	+	Missense_Mutation	SNP	T	T	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	20	33834715	33834715	T	A	SNP	MMP24	ENST00000246186	human	ensembl	74_37	+1	known	missense	c.319	p.L107M	1.000	pirsf_Pept_M10A_Metazoans,pfam_Peptidoglycan-bd-like,superfamily_Peptidoglycan-bd-like	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Pept_M10A_metallopeptidase_C,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP24	HGNC	ENSG00000125966	tier1	-	-	79	0	0.00	38	4	9.52
CCDC30	0	genome.wustl.edu	37	1	42948563	42948563	+	RNA	DEL	A	A	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	1	42948563	42948563	A	-	DEL	CCDC30	ENST00000475614	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CCDC30	HGNC	ENSG00000186409	tier1			25	0	0.00	11	3	21.43
ENSG00000204398	0	genome.wustl.edu	37	13	112240744	112240744	+	RNA	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	13	112240744	112240744	C	T	SNP	ENSG00000204398	ENST00000607406	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-65D24.2	Clone_based_vega_gene	ENSG00000204398	tier1	-	-	39	0	0.00	23	12	34.29
MTFR1	0	genome.wustl.edu	37	8	66620234	66620237	+	Frame_Shift_Del	DEL	AGAG	AGAG	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	AGAG	AGAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	8	66620234	66620237	AGAG	-	DEL	MTFR1	ENST00000262146	human	ensembl	74_37	+1	known	frame_shift_del	c.921_924	p.R309fs	0.994:0.993:0.944:0.308	NULL	pfam_Mtfr1	-	no_errors	MTFR1	HGNC	ENSG00000066855	tier1			58	0	0.00	8	19	70.37
ETAA1	0	genome.wustl.edu	37	2	67631536	67631539	+	Frame_Shift_Del	DEL	TTCT	TTCT	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	TTCT	TTCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	2	67631536	67631539	TTCT	-	DEL	ETAA1	ENST00000272342	human	ensembl	74_37	+1	known	frame_shift_del	c.1722_1725	p.F576fs	0.011:0.116:0.932:0.987	NULL	NULL	-	no_errors	ETAA1	HGNC	ENSG00000143971	tier1			20	0	0.00	16	5	23.81
HYLS1	0	genome.wustl.edu	37	11	125770156	125770158	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	11	125770156	125770158	CTT	-	DEL	HYLS1	ENST00000356438	human	ensembl	74_37	+1	known	in_frame_del	c.893_895	p.S299in_frame_del	1.000:1.000:1.000	NULL	NULL	-	no_errors	HYLS1	HGNC	ENSG00000198331	tier1			52	0	0.00	18	20	52.63
KCNMB3	0	genome.wustl.edu	37	3	178968712	178968712	+	Missense_Mutation	SNP	G	G	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	3	178968712	178968712	G	A	SNP	KCNMB3	ENST00000314235	human	ensembl	74_37	-1	known	missense	c.79	p.P27S	0.002	NULL	pfam_K_chnl_Ca-activ_BK_bsu	-	no_errors	KCNMB3	HGNC	ENSG00000171121	tier1	-	-	45	0	0.00	24	23	48.94
RAB13	0	genome.wustl.edu	37	1	153955850	153955850	+	RNA	SNP	T	T	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	1	153955850	153955850	T	C	SNP	RAB13	ENST00000462680	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RAB13	HGNC	ENSG00000143545	tier1	-	-	57	0	0.00	44	4	8.33
CPA3	0	genome.wustl.edu	37	3	148599387	148599387	+	Missense_Mutation	SNP	A	A	G			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	3	148599387	148599387	A	G	SNP	CPA3	ENST00000296046	human	ensembl	74_37	+1	known	missense	c.655	p.N219D	1.000	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA3	HGNC	ENSG00000163751	tier1	-	-	55	0	0.00	36	4	10.00
C6orf165	0	genome.wustl.edu	37	6	88119637	88119637	+	Missense_Mutation	SNP	T	T	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	6	88119637	88119637	T	C	SNP	C6orf165	ENST00000369562	human	ensembl	74_37	+1	known	missense	c.80	p.I27T	0.100	NULL	pfam_DUF3508	-	no_errors	C6ORF165	Uniprot_gn	ENSG00000272514	tier1	-	-	210	0	0.00	62	63	50.40
ORM1	0	genome.wustl.edu	37	9	117087474	117087474	+	RNA	SNP	C	C	G			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	9	117087474	117087474	C	G	SNP	ORM1	ENST00000477456	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ORM1	HGNC	ENSG00000229314	tier1	-	-	108	0	0.00	87	13	13.00
METTL3	0	genome.wustl.edu	37	14	21967642	21967642	+	Silent	SNP	G	G	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	14	21967642	21967642	G	A	SNP	METTL3	ENST00000298717	human	ensembl	74_37	-1	known	silent	c.1446	p.H482	1.000	pfam_MT-A70-like,pfscan_MT-A70-like	pfam_MT-A70-like,pfscan_MT-A70-like	-	no_errors	METTL3	HGNC	ENSG00000165819	tier1	-	-	35	0	0.00	28	4	12.50
ENSG00000256982	0	genome.wustl.edu	37	16	89119157	89119157	+	RNA	DEL	T	T	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	16	89119157	89119157	T	-	DEL	ENSG00000256982	ENST00000537498	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CTD-2555A7.2	Clone_based_vega_gene	ENSG00000256982	tier1			26	0	0.00	15	3	16.67
ARHGAP31	0	genome.wustl.edu	37	3	119133104	119133134	+	Frame_Shift_Del	DEL	TCTGTCTCCTCCACTCCCACCTGCTCCTCCC	TCTGTCTCCTCCACTCCCACCTGCTCCTCCC	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	TCTGTCTCCTCCACTCCCACCTGCTCCTCCC	TCTGTCTCCTCCACTCCCACCTGCTCCTCCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	3	119133104	119133134	TCTGTCTCCTCCACTCCCACCTGCTCCTCCC	-	DEL	ARHGAP31	ENST00000264245	human	ensembl	74_37	+1	known	frame_shift_del	c.2328_2358	p.S778fs	0.057:0.059:0.035:0.024:0.028:0.051:0.004:0.013:0.021:0.004:0.002:0.000:0.000:0.004:0.007:0.006:0.007:0.007:0.006:0.919:0.985:0.990:1.000:1.000:0.998:0.987:1.000:0.998:1.000:1.000:0.990	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP31	HGNC	ENSG00000031081	tier1			NA	NA	NA	NA	NA	NA
SCG2	0	genome.wustl.edu	37	2	224462494	224462494	+	Nonsense_Mutation	SNP	C	C	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	2	224462494	224462494	C	A	SNP	SCG2	ENST00000305409	human	ensembl	74_37	-1	known	nonsense	c.1507	p.E503*	1.000	pfam_Granin	pfam_Granin	-	no_errors	SCG2	HGNC	ENSG00000171951	tier1	-	-	62	0	0.00	17	3	15.00
SVILP1	0	genome.wustl.edu	37	10	30987307	30987307	+	RNA	SNP	G	G	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	10	30987307	30987307	G	T	SNP	SVILP1	ENST00000435645	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	SVILP1	HGNC	ENSG00000234814	tier1	-	-	84	0	0.00	48	30	38.46
TSC22D2	0	genome.wustl.edu	37	3	150128722	150128722	+	Missense_Mutation	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	3	150128722	150128722	C	T	SNP	TSC22D2	ENST00000361875	human	ensembl	74_37	+1	known	missense	c.1585	p.P529S	1.000	NULL	pfam_TSC-22_Dip_Bun	-	no_errors	TSC22D2	HGNC	ENSG00000196428	tier1	-	-	58	0	0.00	20	18	47.37
CRY1	0	genome.wustl.edu	37	12	107391083	107391085	+	In_Frame_Del	DEL	CTA	CTA	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	CTA	CTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	12	107391083	107391085	CTA	-	DEL	CRY1	ENST00000008527	human	ensembl	74_37	-1	known	in_frame_del	c.1574_1572	p.S527in_frame_del	1.000:1.000:1.000	NULL	pfam_Photolyase_FAD-bd/Cryptochr_C,pfam_DNA_photolyase_N,superfamily_Photolyase_FAD-bd/Cryptochr_C,superfamily_DNA_photolyase_N	-	no_errors	CRY1	HGNC	ENSG00000008405	tier1			50	0	0.00	11	2	15.38
ASAP2	0	genome.wustl.edu	37	2	9515060	9515060	+	Missense_Mutation	SNP	T	T	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	2	9515060	9515060	T	C	SNP	ASAP2	ENST00000281419	human	ensembl	74_37	+1	known	missense	c.1733	p.L578P	1.000	superfamily_Ankyrin_rpt-contain_dom	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ASAP2	HGNC	ENSG00000151693	tier1	-	-	56	0	0.00	13	27	67.50
ZNF610	0	genome.wustl.edu	37	19	52869510	52869510	+	Nonsense_Mutation	SNP	T	T	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	19	52869510	52869510	T	A	SNP	ZNF610	ENST00000321287	human	ensembl	74_37	+1	known	nonsense	c.879	p.C293*	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF610	HGNC	ENSG00000167554	tier1	-	-	42	0	0.00	27	3	10.00
ENSG00000257931	0	genome.wustl.edu	37	14	19969169	19969169	+	RNA	SNP	T	T	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	14	19969169	19969169	T	C	SNP	ENSG00000257931	ENST00000547399	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.600	-	-	-	no_errors	CTD-2311B13.7	Clone_based_vega_gene	ENSG00000257931	tier1	-	-	16	0	0.00	12	5	29.41
TRIM52	0	genome.wustl.edu	37	5	180687743	180687746	+	Frame_Shift_Del	DEL	CAAG	CAAG	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	CAAG	CAAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	5	180687743	180687746	CAAG	-	DEL	TRIM52	ENST00000327767	human	ensembl	74_37	-1	known	frame_shift_del	c.72_69	p.C23fs	1.000:1.000:1.000:1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM52	HGNC	ENSG00000183718	tier1			40	0	0.00	19	14	42.42
STK36	0	genome.wustl.edu	37	2	219563973	219563973	+	Missense_Mutation	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	2	219563973	219563973	C	T	SNP	STK36	ENST00000295709	human	ensembl	74_37	+1	known	missense	c.3706	p.R1236W	0.994	superfamily_ARM-type_fold	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK36	HGNC	ENSG00000163482	tier1	-	-	42	0	0.00	9	10	52.63
RTEL1	0	genome.wustl.edu	37	20	62321658	62321658	+	Frame_Shift_Del	DEL	G	G	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	20	62321658	62321658	G	-	DEL	RTEL1	ENST00000318100	human	ensembl	74_37	+1	known	frame_shift_del	c.2277	p.A760fs	0.000	NULL	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	RTEL1	HGNC	ENSG00000258366	tier1			53	0	0.00	15	2	11.76
AANAT	0	genome.wustl.edu	37	17	74465965	74465965	+	Silent	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	17	74465965	74465965	C	T	SNP	AANAT	ENST00000250615	human	ensembl	74_37	+1	known	silent	c.672	p.C224	0.020	superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	AANAT	HGNC	ENSG00000129673	tier1	-	-	67	0	0.00	32	3	8.57
SHOX2	0	genome.wustl.edu	37	3	157816014	157816014	+	Silent	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	3	157816014	157816014	C	T	SNP	SHOX2	ENST00000389589	human	ensembl	74_37	-1	known	silent	c.870	p.P290	1.000	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	SHOX2	HGNC	ENSG00000168779	tier1	-	-	37	0	0.00	37	4	9.76
EDDM3B	0	genome.wustl.edu	37	14	21238473	21238473	+	Missense_Mutation	SNP	G	G	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	14	21238473	21238473	G	T	SNP	EDDM3B	ENST00000326783	human	ensembl	74_37	+1	known	missense	c.164	p.R55I	0.027	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain	-	no_errors	EDDM3B	HGNC	ENSG00000181552	tier1	-	-	32	0	0.00	38	4	9.52
LINC00933	0	genome.wustl.edu	37	15	85121416	85121416	+	RNA	SNP	A	A	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	15	85121416	85121416	A	T	SNP	LINC00933	ENST00000557887	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.235	-	-	-	no_errors	LINC00933	HGNC	ENSG00000259728	tier1	-	-	19	0	0.00	6	3	33.33
GART	0	genome.wustl.edu	37	21	34882121	34882122	+	Frame_Shift_Ins	INS	-	-	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	21	34882121	34882122	-	T	INS	GART	ENST00000381815	human	ensembl	74_37	-1	known	frame_shift_ins	c.2421_2420	p.A808fs	0.864:0.844	superfamily_Formyl_transf_N,tigrfam_PurN_trans	pfam_PRibGlycinamid_synth_ATP-grasp,pfam_Formyl_transf_N,pfam_PRibGlycinamide_synth_N,pfam_AIR_synth_C_dom,pfam_PRibGlycinamide_synth_C-dom,pfam_AIR_synth_N_dom,pfam_ATP-grasp_carboxylate-amine,pfam_CbamoylP_synth_lsu-like_ATP-bd,superfamily_Formyl_transf_N,superfamily_AIR_synth_C_dom,superfamily_PurM_N-like,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,pfscan_ATP-grasp,tigrfam_PRibGlycinamide_synth,tigrfam_PurM_cligase,tigrfam_PurN_trans	-	no_errors	GART	HGNC	ENSG00000159131	tier1			57	0	0.00	33	4	10.81
STAT2	0	genome.wustl.edu	37	12	56744659	56744659	+	Missense_Mutation	SNP	G	G	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	12	56744659	56744659	G	T	SNP	STAT2	ENST00000314128	human	ensembl	74_37	-1	known	missense	c.1048	p.L350I	1.000	pfam_STAT_TF_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_STAT2_C,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT2	HGNC	ENSG00000170581	tier1	-	-	49	0	0.00	13	3	18.75
TENM3	0	genome.wustl.edu	37	4	183650181	183650181	+	Missense_Mutation	SNP	A	A	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	4	183650181	183650181	A	C	SNP	TENM3	ENST00000406950	human	ensembl	74_37	+1	known	missense	c.2432	p.Y811S	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c-like_dom,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM3	HGNC	ENSG00000218336	tier1	-	-	72	0	0.00	24	29	54.72
KMT2D	0	genome.wustl.edu	37	12	49431874	49431874	+	Frame_Shift_Del	DEL	C	C	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	12	49431874	49431874	C	-	DEL	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	frame_shift_del	c.9265	p.V3089fs	0.784	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1			144	0	0.00	49	5	9.26
ENSG00000263378	0	genome.wustl.edu	37	6	73972779	73972793	+	RNA	DEL	GCGGCGGCGGCGGCA	GCGGCGGCGGCGGCA	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	GCGGCGGCGGCGGCA	GCGGCGGCGGCGGCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	6	73972779	73972793	GCGGCGGCGGCGGCA	-	DEL	ENSG00000263378	ENST00000584443	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.010:0.008:0.003:0.004:0.002:0.001:0.002:0.003:0.003:0.012:0.028:0.028:0.029:0.029:0.028	-	-	-	no_errors	AC019205.1	Clone_based_ensembl_gene	ENSG00000263378	tier1			NA	NA	NA	NA	NA	NA
NSUN5	0	genome.wustl.edu	37	7	72717970	72717973	+	Frame_Shift_Del	DEL	GCAT	GCAT	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	GCAT	GCAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	7	72717970	72717973	GCAT	-	DEL	NSUN5	ENST00000438747	human	ensembl	74_37	-1	known	frame_shift_del	c.998_995	p.H332fs	0.962:0.948:0.057:0.066	pfam_Fmu/NOL1/Nop2p	pfam_Fmu/NOL1/Nop2p,prints_RCMT	-	no_errors	NSUN5	HGNC	ENSG00000130305	tier1			85	0	0.00	34	27	44.26
SCYL2	0	genome.wustl.edu	37	12	100732431	100732431	+	Missense_Mutation	SNP	G	G	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	12	100732431	100732431	G	T	SNP	SCYL2	ENST00000360820	human	ensembl	74_37	+1	known	missense	c.2271	p.M757I	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	SCYL2	HGNC	ENSG00000136021	tier1	-	-	74	0	0.00	26	3	10.34
PGLYRP3	0	genome.wustl.edu	37	1	153270612	153270612	+	Splice_Site	SNP	T	T	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	1	153270612	153270612	T	C	SNP	PGLYRP3	ENST00000290722	human	ensembl	74_37	-1	known	splice_site	c.848-2	e7-2	0.630	-	-	-	no_errors	PGLYRP3	HGNC	ENSG00000159527	tier1	-	-	87	0	0.00	36	4	10.00
SLC9A8	0	genome.wustl.edu	37	20	48481298	48481298	+	Frame_Shift_Del	DEL	G	G	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	20	48481298	48481298	G	-	DEL	SLC9A8	ENST00000417961	human	ensembl	74_37	+1	known	frame_shift_del	c.923	p.T310fs	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A8	HGNC	ENSG00000197818	tier1			49	0	0.00	12	2	14.29
ERAS	0	genome.wustl.edu	37	X	48688026	48688026	+	Missense_Mutation	SNP	G	G	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	X	48688026	48688026	G	T	SNP	ERAS	ENST00000338270	human	ensembl	74_37	+1	known	missense	c.493	p.A165S	0.006	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	ERAS	HGNC	ENSG00000187682	tier1	-	-	75	0	0.00	20	3	13.04
NOD2	0	genome.wustl.edu	37	16	50765685	50765685	+	Frame_Shift_Del	DEL	G	G	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	16	50765685	50765685	G	-	DEL	NOD2	ENST00000300589	human	ensembl	74_37	+1	known	frame_shift_del	c.3078	p.E1027fs	1.000	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NOD2	HGNC	ENSG00000167207	tier1			51	0	0.00	15	2	11.76
DHRS7C	0	genome.wustl.edu	37	17	9675005	9675005	+	Missense_Mutation	SNP	T	T	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	17	9675005	9675005	T	C	SNP	DHRS7C	ENST00000330255	human	ensembl	74_37	-1	known	missense	c.739	p.R247G	1.000	NULL	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	DHRS7C	HGNC	ENSG00000184544	tier1	-	-	61	0	0.00	42	4	8.70
PRPS2	0	genome.wustl.edu	37	X	12837656	12837656	+	Silent	SNP	G	G	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	X	12837656	12837656	G	T	SNP	PRPS2	ENST00000398491	human	ensembl	74_37	+1	known	silent	c.570	p.V190	1.000	pfam_PRibTrfase_dom,tigrfam_Rib-P_diPkinase	pfam_PRibTrfase_dom,tigrfam_Rib-P_diPkinase	-	no_errors	PRPS2	HGNC	ENSG00000101911	tier1	-	-	49	0	0.00	20	3	13.04
SLC25A5	0	genome.wustl.edu	37	X	118603830	118603830	+	Silent	SNP	A	A	G			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	X	118603830	118603830	A	G	SNP	SLC25A5	ENST00000317881	human	ensembl	74_37	+1	known	silent	c.318	p.R106	0.998	superfamily_Mt_carrier_dom	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier,prints_Aden_trnslctor	-	no_errors	SLC25A5	HGNC	ENSG00000005022	tier1	rs73637847	-	41	0	0.00	16	13	44.83
TP53	0	genome.wustl.edu	37	17	7579346	7579348	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	17	7579346	7579348	AAG	-	DEL	TP53	ENST00000269305	human	ensembl	74_37	-1	known	in_frame_del	c.341_339	p.F113in_frame_del	0.998:1.000:1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1			124	0	0.00	4	30	88.24
VPS13C	0	genome.wustl.edu	37	15	62261502	62261502	+	Silent	SNP	A	A	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	15	62261502	62261502	A	T	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	silent	c.2907	p.I969	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	tier1	-	-	47	0	0.00	28	4	12.50
SYT6	0	genome.wustl.edu	37	1	114646326	114646326	+	Silent	SNP	T	T	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	1	114646326	114646326	T	C	SNP	SYT6	ENST00000393296	human	ensembl	74_37	-1	known	silent	c.1089	p.G363	0.716	superfamily_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_dom	-	no_errors	SYT6	HGNC	ENSG00000134207	tier1	-	-	48	0	0.00	22	11	33.33
TRIM73	0	genome.wustl.edu	37	7	75028241	75028241	+	Silent	SNP	G	G	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	7	75028241	75028241	G	A	SNP	TRIM73	ENST00000323819	human	ensembl	74_37	+1	known	silent	c.24	p.L8	0.004	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM73	HGNC	ENSG00000178809	tier1	rs117463977	-	149	1	0.67	97	12	11.01
ABI1	0	genome.wustl.edu	37	10	27060004	27060004	+	Missense_Mutation	SNP	C	C	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	10	27060004	27060004	C	A	SNP	ABI1	ENST00000376142	human	ensembl	74_37	-1	known	missense	c.477	p.K159N	1.000	pfam_Abl-interactor_HHR_dom	pfam_Abl-interactor_HHR_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,pfscan_T_SNARE_dom,prints_SH3_domain,prints_p67phox	-	no_errors	ABI1	HGNC	ENSG00000136754	tier1	-	-	87	0	0.00	46	4	8.00
MIR202	0	genome.wustl.edu	37	10	135061186	135061186	+	RNA	SNP	G	G	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	10	135061186	135061186	G	A	SNP	MIR202	ENST00000300167	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	MIR202	HGNC	ENSG00000166917	tier1	-	-	92	0	0.00	42	32	43.24
CDH9	0	genome.wustl.edu	37	5	26988233	26988233	+	Missense_Mutation	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	5	26988233	26988233	C	T	SNP	CDH9	ENST00000231021	human	ensembl	74_37	-1	known	missense	c.208	p.D70N	1.000	pfam_Cadherin,superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH9	HGNC	ENSG00000113100	tier1	-	-	29	0	0.00	34	4	10.53
ZNF469	0	genome.wustl.edu	37	16	88504643	88504643	+	Frame_Shift_Del	DEL	C	C	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	16	88504643	88504643	C	-	DEL	ZNF469	ENST00000437464	human	ensembl	74_37	+1	known	frame_shift_del	c.10681	p.P3561fs	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF469	HGNC	ENSG00000225614	tier1			57	0	0.00	19	28	59.57
COL10A1	0	genome.wustl.edu	37	6	116442752	116442752	+	Missense_Mutation	SNP	T	T	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	6	116442752	116442752	T	C	SNP	COL10A1	ENST00000243222	human	ensembl	74_37	-1	known	missense	c.527	p.K176R	1.000	NULL	pfam_Collagen,pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	COL10A1	HGNC	ENSG00000123500	tier1	-	-	48	0	0.00	39	4	9.30
TEX261	0	genome.wustl.edu	37	2	71215822	71215822	+	Missense_Mutation	SNP	T	T	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	2	71215822	71215822	T	C	SNP	TEX261	ENST00000272438	human	ensembl	74_37	-1	known	missense	c.499	p.T167A	1.000	pfam_Transmembrane_adaptor_Erv26	pfam_Transmembrane_adaptor_Erv26	-	no_errors	TEX261	HGNC	ENSG00000144043	tier1	-	-	48	0	0.00	42	4	8.70
FGF9	0	genome.wustl.edu	37	13	22275848	22275849	+	RNA	INS	-	-	TGTGTG			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	13	22275848	22275849	-	TGTGTG	INS	FGF9	ENST00000478546	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004:0.000	-	-	-	no_errors	FGF9	HGNC	ENSG00000102678	tier1			NA	NA	NA	NA	NA	NA
ERBB2	0	genome.wustl.edu	37	17	37872823	37872823	+	Nonsense_Mutation	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	17	37872823	37872823	C	T	SNP	ERBB2	ENST00000269571	human	ensembl	74_37	+1	known	nonsense	c.1702	p.Q568*	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB2	HGNC	ENSG00000141736	tier1	-	-	43	0	0.00	34	4	10.53
RBP3	0	genome.wustl.edu	37	10	48389030	48389030	+	Silent	SNP	G	G	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	10	48389030	48389030	G	A	SNP	RBP3	ENST00000224600	human	ensembl	74_37	-1	known	silent	c.1848	p.I616	0.981	pfam_Interphotoreceptor_retinol-bd,smart_Interphotoreceptor_retinol-bd	pfam_Interphotoreceptor_retinol-bd,pfam_Interphotorcpt_retinol-bd_N,smart_Interphotoreceptor_retinol-bd	-	no_errors	RBP3	HGNC	ENSG00000107618	tier1	-	-	75	0	0.00	32	4	11.11
SLC13A4	0	genome.wustl.edu	37	7	135412200	135412200	+	Silent	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	7	135412200	135412200	C	T	SNP	SLC13A4	ENST00000354042	human	ensembl	74_37	-1	known	silent	c.45	p.L15	0.998	pfam_Na/sul_symport	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom,pfam_DctM	-	no_errors	SLC13A4	HGNC	ENSG00000164707	tier1	-	-	62	0	0.00	39	4	9.30
SLC30A9	0	genome.wustl.edu	37	4	42041023	42041024	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	4	42041023	42041024	AG	-	DEL	SLC30A9	ENST00000264451	human	ensembl	74_37	+1	known	frame_shift_del	c.690_691	p.F233fs	0.990:0.999	NULL	pfam_Cation_efflux,superfamily_DNA-bd_dom_put,tigrfam_Cation_efflux	-	no_errors	SLC30A9	HGNC	ENSG00000014824	tier1			158	0	0.00	58	8	12.12
NPDC1	0	genome.wustl.edu	37	9	139935530	139935531	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	9	139935530	139935531	CT	-	DEL	NPDC1	ENST00000371600	human	ensembl	74_37	-1	known	frame_shift_del	c.603_602	p.Q201fs	0.001:0.001	pfam_NPDC1	pfam_NPDC1	-	no_errors	NPDC1	HGNC	ENSG00000107281	tier1			84	0	0.00	34	27	44.26
ARHGEF28	0	genome.wustl.edu	37	5	73236726	73236726	+	Missense_Mutation	SNP	C	C	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	5	73236726	73236726	C	A	SNP	ARHGEF28	ENST00000545377	human	ensembl	74_37	+1	known	missense	c.5084	p.P1695H	0.003	NULL	pfam_DH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF28	HGNC	ENSG00000214944	tier1	-	-	72	0	0.00	43	4	8.51
TMEM131	0	genome.wustl.edu	37	2	98409102	98409102	+	Silent	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	2	98409102	98409102	C	T	SNP	TMEM131	ENST00000186436	human	ensembl	74_37	-1	known	silent	c.3891	p.P1297	0.000	NULL	pfam_DUF3651_TMEM131	-	no_errors	TMEM131	HGNC	ENSG00000075568	tier1	-	-	56	0	0.00	45	4	8.16
C4orf40	0	genome.wustl.edu	37	4	71024318	71024318	+	Missense_Mutation	SNP	T	T	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	4	71024318	71024318	T	A	SNP	C4orf40	ENST00000344526	human	ensembl	74_37	+1	known	missense	c.349	p.F117I	0.000	NULL	NULL	-	no_errors	C4orf40	HGNC	ENSG00000187533	tier1	-	-	56	0	0.00	25	17	40.48
DGKZ	0	genome.wustl.edu	37	11	46393986	46393986	+	Missense_Mutation	SNP	G	G	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	11	46393986	46393986	G	T	SNP	DGKZ	ENST00000454345	human	ensembl	74_37	+1	known	missense	c.1500	p.K500N	1.000	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	DGKZ	HGNC	ENSG00000149091	tier1	-	-	30	0	0.00	38	4	9.52
ANKRD12	0	genome.wustl.edu	37	18	9256921	9256921	+	Missense_Mutation	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	18	9256921	9256921	C	T	SNP	ANKRD12	ENST00000262126	human	ensembl	74_37	+1	known	missense	c.3656	p.T1219I	0.949	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD12	HGNC	ENSG00000101745	tier1	-	-	44	0	0.00	42	4	8.70
NFE2L1	0	genome.wustl.edu	37	17	46128077	46128077	+	RNA	DEL	A	A	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	17	46128077	46128077	A	-	DEL	NFE2L1	ENST00000579481	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.035	-	-	-	no_errors	NFE2L1	HGNC	ENSG00000082641	tier1			26	0	0.00	22	3	12.00
AHNAK	0	genome.wustl.edu	37	11	62286210	62286210	+	Missense_Mutation	SNP	G	G	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	11	62286210	62286210	G	A	SNP	AHNAK	ENST00000378024	human	ensembl	74_37	-1	known	missense	c.15679	p.P5227S	1.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942	tier1	-	-	43	0	0.00	17	17	50.00
AMY1C	0	genome.wustl.edu	37	1	104297408	104297408	+	Missense_Mutation	SNP	G	G	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	1	104297408	104297408	G	A	SNP	AMY1C	ENST00000370079	human	ensembl	74_37	+1	known	missense	c.1073	p.R358H	0.998	superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY1C	HGNC	ENSG00000187733	tier1	-	-	19	0	0.00	1	10	90.91
ATMIN	0	genome.wustl.edu	37	16	81077734	81077735	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	16	81077734	81077735	AT	-	DEL	ATMIN	ENST00000299575	human	ensembl	74_37	+1	known	frame_shift_del	c.1631_1632	p.H544fs	0.052:0.000	NULL	smart_Znf_C2H2-like	-	no_errors	ATMIN	HGNC	ENSG00000166454	tier1			50	0	0.00	20	9	31.03
MYADML	0	genome.wustl.edu	37	2	33952486	33952486	+	RNA	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	2	33952486	33952486	C	T	SNP	MYADML	ENST00000474610	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.071	-	-	-	no_errors	MYADML	HGNC	ENSG00000239649	tier1	-	-	43	0	0.00	42	4	8.70
MBD3L1	0	genome.wustl.edu	37	19	8953669	8953669	+	Silent	SNP	G	G	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	19	8953669	8953669	G	T	SNP	MBD3L1	ENST00000305625	human	ensembl	74_37	+1	known	silent	c.315	p.L105	0.000	NULL	NULL	-	no_errors	MBD3L1	HGNC	ENSG00000170948	tier1	-	-	68	0	0.00	43	5	10.42
RSL1D1	0	genome.wustl.edu	37	16	11941583	11941584	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	16	11941583	11941584	TT	-	DEL	RSL1D1	ENST00000571133	human	ensembl	74_37	-1	known	frame_shift_del	c.326_325	p.K109fs	0.995:0.892	pfam_Ribosomal_L1/biogenesis,superfamily_Ribosomal_L1-like	pfam_Ribosomal_L1/biogenesis,superfamily_Ribosomal_L1-like	-	no_errors	RSL1D1	HGNC	ENSG00000171490	tier1			68	0	0.00	31	29	48.33
ENSG00000253334	0	genome.wustl.edu	37	8	82727641	82727641	+	RNA	DEL	A	A	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	8	82727641	82727641	A	-	DEL	ENSG00000253334	ENST00000524337	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.496	-	-	-	no_errors	RP13-923O23.6	Clone_based_vega_gene	ENSG00000253334	tier1			19	0	0.00	6	3	33.33
ANP32B	0	genome.wustl.edu	37	9	100767419	100767419	+	Silent	SNP	A	A	G			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	9	100767419	100767419	A	G	SNP	ANP32B	ENST00000339399	human	ensembl	74_37	+1	known	silent	c.501	p.E167	0.986	NULL	smart_U2A'_phosphoprotein32A_C	-	no_errors	ANP32B	HGNC	ENSG00000136938	tier1	-	-	68	0	0.00	44	4	8.33
PRKAR2B	0	genome.wustl.edu	37	7	106786808	106786809	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	7	106786808	106786809	TA	-	DEL	PRKAR2B	ENST00000265717	human	ensembl	74_37	+1	known	frame_shift_del	c.643_644	p.Y215fs	1.000:1.000	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pirsf_cAMP_dep_PK_reg_su,pfscan_cNMP-bd_dom	pfam_cNMP-bd_dom,pfam_cAMP_dep_PK_reg_su_I/II_a/b,superfamily_cNMP-bd-like,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,smart_cAMP_dep_PK_reg_su_I/II_a/b,smart_cNMP-bd_dom,pirsf_cAMP_dep_PK_reg_su,pfscan_cNMP-bd_dom,prints_cAMP/cGMP_kin	-	no_errors	PRKAR2B	HGNC	ENSG00000005249	tier1			84	0	0.00	37	24	39.34
ACAP1	0	genome.wustl.edu	37	17	7250169	7250169	+	Silent	SNP	G	G	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	17	7250169	7250169	G	A	SNP	ACAP1	ENST00000158762	human	ensembl	74_37	+1	known	silent	c.1050	p.L350	0.998	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_ArfGAP,pfam_Pleckstrin_homology,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ACAP1	HGNC	ENSG00000072818	tier1	-	-	38	0	0.00	19	4	17.39
KRTAP10-9	0	genome.wustl.edu	37	21	46048196	46048197	+	RNA	INS	-	-	CGCTGGT			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	21	46048196	46048197	-	CGCTGGT	INS	KRTAP10-9	ENST00000484861	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	KRTAP10-9	HGNC	ENSG00000221837	tier1			NA	NA	NA	NA	NA	NA
IRF3	0	genome.wustl.edu	37	19	50165229	50165230	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	19	50165229	50165230	AC	-	DEL	IRF3	ENST00000309877	human	ensembl	74_37	-1	known	frame_shift_del	c.958_957	p.F320fs	0.004:0.003	pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF3	HGNC	ENSG00000126456	tier1			67	0	0.00	28	21	42.86
HERC1	0	genome.wustl.edu	37	15	63904735	63904735	+	Silent	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	15	63904735	63904735	C	T	SNP	HERC1	ENST00000443617	human	ensembl	74_37	-1	known	silent	c.14115	p.G4705	0.304	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC	ENSG00000103657	tier1	-	-	85	0	0.00	31	4	11.43
SGOL1	0	genome.wustl.edu	37	3	20212755	20212755	+	RNA	DEL	A	A	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	3	20212755	20212755	A	-	DEL	SGOL1	ENST00000460637	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	SGOL1	HGNC	ENSG00000129810	tier1			24	0	0.00	18	3	14.29
FRMD1	0	genome.wustl.edu	37	6	168464403	168464403	+	Missense_Mutation	SNP	G	G	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	6	168464403	168464403	G	A	SNP	FRMD1	ENST00000283309	human	ensembl	74_37	-1	known	missense	c.682	p.R228W	0.938	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	-	no_errors	FRMD1	HGNC	ENSG00000153303	tier1	-	-	30	0	0.00	21	16	43.24
COQ9	0	genome.wustl.edu	37	16	57493517	57493519	+	In_Frame_Del	DEL	ACA	ACA	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	ACA	ACA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	16	57493517	57493519	ACA	-	DEL	COQ9	ENST00000262507	human	ensembl	74_37	+1	known	in_frame_del	c.752_754	p.N252in_frame_del	1.000:1.000:1.000	pfam_COQ9,tigrfam_Ubiq_biosynth_COQ9	pfam_COQ9,superfamily_Homeodomain-like,tigrfam_Ubiq_biosynth_COQ9	-	no_errors	COQ9	HGNC	ENSG00000088682	tier1			36	0	0.00	5	18	78.26
TEX10	0	genome.wustl.edu	37	9	103109310	103109310	+	Missense_Mutation	SNP	C	C	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	9	103109310	103109310	C	A	SNP	TEX10	ENST00000374902	human	ensembl	74_37	-1	known	missense	c.559	p.V187L	1.000	pfam_IPI1/TEX10,superfamily_ARM-type_fold	pfam_IPI1/TEX10,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	TEX10	HGNC	ENSG00000136891	tier1	-	-	30	0	0.00	11	16	59.26
OS9	0	genome.wustl.edu	37	12	58114250	58114250	+	Nonsense_Mutation	SNP	G	G	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	12	58114250	58114250	G	A	SNP	OS9	ENST00000315970	human	ensembl	74_37	+1	known	nonsense	c.1827	p.W609*	1.000	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom	-	no_errors	OS9	HGNC	ENSG00000135506	tier1	-	-	61	0	0.00	18	3	14.29
FUZ	0	genome.wustl.edu	37	19	50315965	50315965	+	Missense_Mutation	SNP	T	T	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	19	50315965	50315965	T	C	SNP	FUZ	ENST00000313777	human	ensembl	74_37	-1	known	missense	c.140	p.N47S	1.000	NULL	NULL	-	no_errors	FUZ	HGNC	ENSG00000010361	tier1	-	-	51	0	0.00	24	21	46.67
SCNN1A	0	genome.wustl.edu	37	12	6464514	6464514	+	Frame_Shift_Del	DEL	T	T	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	12	6464514	6464514	T	-	DEL	SCNN1A	ENST00000358945	human	ensembl	74_37	-1	known	frame_shift_del	c.1067	p.Q356fs	1.000	pfam_Na+channel_ASC,prints_Na+channel_ASC,tigrfam_EnaC	pfam_Na+channel_ASC,prints_Na+channel_ASC,tigrfam_EnaC	-	no_errors	SCNN1A	HGNC	ENSG00000111319	tier1			32	0	0.00	7	2	22.22
SLC29A2	0	genome.wustl.edu	37	11	66136939	66136939	+	Missense_Mutation	SNP	G	G	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	11	66136939	66136939	G	T	SNP	SLC29A2	ENST00000357440	human	ensembl	74_37	-1	known	missense	c.176	p.T59K	0.786	superfamily_MFS_dom_general_subst_transpt,tigrfam_Eqnu_transpt	pfam_Eqnu_transpt,superfamily_MFS_dom_general_subst_transpt,prints_Eqnu_transpt,tigrfam_Eqnu_transpt	-	no_errors	SLC29A2	HGNC	ENSG00000174669	tier1	-	-	65	0	0.00	43	4	8.51
ATAD2	0	genome.wustl.edu	37	8	124381375	124381375	+	Silent	SNP	G	G	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	8	124381375	124381375	G	T	SNP	ATAD2	ENST00000287394	human	ensembl	74_37	-1	known	silent	c.972	p.G324	0.998	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2	HGNC	ENSG00000156802	tier1	-	-	43	0	0.00	23	3	11.54
DNMT1	0	genome.wustl.edu	37	19	10244331	10244331	+	RNA	SNP	G	G	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	19	10244331	10244331	G	A	SNP	DNMT1	ENST00000591798	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DNMT1	HGNC	ENSG00000130816	tier1	-	-	54	0	0.00	12	3	20.00
LETM1	0	genome.wustl.edu	37	4	1824837	1824837	+	Missense_Mutation	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	4	1824837	1824837	C	T	SNP	LETM1	ENST00000302787	human	ensembl	74_37	-1	known	missense	c.1354	p.V452M	0.993	NULL	pfam_LETM1,pfscan_EF_hand_dom	-	no_errors	LETM1	HGNC	ENSG00000168924	tier1	-	-	65	0	0.00	6	10	62.50
ATP10D	0	genome.wustl.edu	37	4	47593241	47593241	+	Missense_Mutation	SNP	C	C	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	4	47593241	47593241	C	A	SNP	ATP10D	ENST00000273859	human	ensembl	74_37	+1	known	missense	c.4124	p.P1375H	0.000	NULL	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10D	HGNC	ENSG00000145246	tier1	-	-	38	0	0.00	19	3	13.64
PLXNB2	0	genome.wustl.edu	37	22	50718148	50718148	+	Missense_Mutation	SNP	T	T	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	22	50718148	50718148	T	C	SNP	PLXNB2	ENST00000359337	human	ensembl	74_37	-1	known	missense	c.4300	p.K1434E	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB2	HGNC	ENSG00000196576	tier1	-	-	90	0	0.00	4	26	86.67
TLN2	0	genome.wustl.edu	37	15	63055879	63055879	+	Silent	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	15	63055879	63055879	C	T	SNP	TLN2	ENST00000306829	human	ensembl	74_37	+1	known	silent	c.5079	p.D1693	0.962	superfamily_Vinculin/catenin	pfam_Talin_cent,pfam_ILWEQ_dom,pfam_Vinculin-bd_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN2	HGNC	ENSG00000171914	tier1	-	-	33	0	0.00	12	23	65.71
ATRX	0	genome.wustl.edu	37	X	76939473	76939474	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	X	76939473	76939474	TT	-	DEL	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	frame_shift_del	c.1275_1274	p.K425fs	0.312:0.307	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1			53	0	0.00	3	15	83.33
MOSPD1	0	genome.wustl.edu	37	X	134033514	134033514	+	RNA	SNP	A	A	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	X	134033514	134033514	A	C	SNP	MOSPD1	ENST00000462060	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.873	-	-	-	no_errors	MOSPD1	HGNC	ENSG00000101928	tier1	-	-	65	0	0.00	23	29	55.77
UGGT1	0	genome.wustl.edu	37	2	128900693	128900694	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	2	128900693	128900694	AA	-	DEL	UGGT1	ENST00000259253	human	ensembl	74_37	+1	known	frame_shift_del	c.1745_1746	p.K583fs	0.996:0.531	NULL	pfam_UDP-g_GGtrans	-	no_errors	UGGT1	HGNC	ENSG00000136731	tier1			99	0	0.00	25	19	43.18
LYST	0	genome.wustl.edu	37	1	235929491	235929491	+	Silent	SNP	A	A	G			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	1	235929491	235929491	A	G	SNP	LYST	ENST00000389793	human	ensembl	74_37	-1	known	silent	c.6009	p.P2003	0.999	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669	tier1	-	-	36	0	0.00	18	3	14.29
AFM	0	genome.wustl.edu	37	4	74347514	74347514	+	Frame_Shift_Del	DEL	G	G	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	4	74347514	74347514	G	-	DEL	AFM	ENST00000226355	human	ensembl	74_37	+1	known	frame_shift_del	c.22	p.G8fs	0.856	pirsf_Serum_albumin/AFP	pirsf_Serum_albumin/AFP,pfam_Serum_albumin_N,superfamily_Serum_albumin-like,smart_Serum_albumin_N,prints_ALB/AFP/VDB,prints_Alpha-fetoprotein	-	no_errors	AFM	HGNC	ENSG00000079557	tier1			99	0	0.00	35	16	31.37
TULP4	0	genome.wustl.edu	37	6	158923753	158923753	+	Frame_Shift_Del	DEL	G	G	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	6	158923753	158923753	G	-	DEL	TULP4	ENST00000367097	human	ensembl	74_37	+1	known	frame_shift_del	c.3058	p.V1022fs	0.001	NULL	pfam_Tubby_C,pfam_SOCS_C,pfam_WD40_repeat,superfamily_Tubby_C-like,superfamily_WD40_repeat_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_WD40_repeat,smart_SOCS_C,pfscan_SOCS_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TULP4	HGNC	ENSG00000130338	tier1			35	0	0.00	16	2	11.11
LOC643201	0	genome.wustl.edu	37	5	175583878	175583878	+	RNA	SNP	G	G	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	5	175583878	175583878	G	T	SNP	LOC643201	ENST00000515403	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.940	-	-	-	no_errors	RP11-844P9.2	Clone_based_vega_gene	ENSG00000248596	tier1	-	-	48	0	0.00	37	4	9.76
SLC7A9	0	genome.wustl.edu	37	19	33349358	33349358	+	Missense_Mutation	SNP	A	A	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	19	33349358	33349358	A	C	SNP	SLC7A9	ENST00000023064	human	ensembl	74_37	-1	known	missense	c.965	p.F322C	1.000	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A9	HGNC	ENSG00000021488	tier1	-	-	37	0	0.00	17	8	32.00
MLF1IP	0	genome.wustl.edu	37	4	185652114	185652114	+	Missense_Mutation	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	4	185652114	185652114	C	T	SNP	MLF1IP	ENST00000281453	human	ensembl	74_37	-1	known	missense	c.56	p.R19H	0.000	NULL	NULL	-	no_errors	MLF1IP	HGNC	ENSG00000151725	tier1	-	-	86	0	0.00	35	8	18.60
SGPP1	0	genome.wustl.edu	37	14	64153216	64153216	+	Silent	SNP	G	G	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	14	64153216	64153216	G	T	SNP	SGPP1	ENST00000247225	human	ensembl	74_37	-1	known	silent	c.933	p.T311	0.986	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	SGPP1	HGNC	ENSG00000126821	tier1	-	-	74	0	0.00	39	4	9.30
VPS8	0	genome.wustl.edu	37	3	184689503	184689503	+	Missense_Mutation	SNP	A	A	G			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	3	184689503	184689503	A	G	SNP	VPS8	ENST00000287546	human	ensembl	74_37	+1	known	missense	c.3383	p.Q1128R	1.000	superfamily_Quinonprotein_ADH-like_supfam	superfamily_Quinonprotein_ADH-like_supfam,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Znf_RING,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	VPS8	HGNC	ENSG00000156931	tier1	-	-	57	0	0.00	25	3	10.71
PDE6H	0	genome.wustl.edu	37	12	15132126	15132126	+	Frame_Shift_Del	DEL	A	A	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	12	15132126	15132126	A	-	DEL	PDE6H	ENST00000266395	human	ensembl	74_37	+1	known	frame_shift_del	c.148	p.I50fs	1.000	pfam_PDE6_gamma,pirsf_PDE6_gamma	pfam_PDE6_gamma,pirsf_PDE6_gamma	-	no_errors	PDE6H	HGNC	ENSG00000139053	tier1			56	0	0.00	13	2	13.33
TPCN2	0	genome.wustl.edu	37	11	68855412	68855412	+	Silent	SNP	G	G	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	11	68855412	68855412	G	T	SNP	TPCN2	ENST00000294309	human	ensembl	74_37	+1	known	silent	c.2250	p.L750	0.989	NULL	pfam_Ion_trans_dom	-	no_errors	TPCN2	HGNC	ENSG00000162341	tier1	-	-	24	0	0.00	12	3	20.00
PTPN7	0	genome.wustl.edu	37	1	202123433	202123433	+	Missense_Mutation	SNP	T	T	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	1	202123433	202123433	T	C	SNP	PTPN7	ENST00000309017	human	ensembl	74_37	-1	known	missense	c.802	p.K268E	0.994	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_KIM-con,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_KIM-con,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN7	HGNC	ENSG00000143851	tier1	-	-	63	0	0.00	44	4	8.33
TADA3	0	genome.wustl.edu	37	3	9827049	9827050	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	3	9827049	9827050	CT	-	DEL	TADA3	ENST00000301964	human	ensembl	74_37	-1	known	frame_shift_del	c.871_870	p.A292fs	0.617:0.028	NULL	pfam_Histone_AcTrfase_su3	-	no_errors	TADA3	HGNC	ENSG00000171148	tier1			85	0	0.00	24	12	33.33
MICALL1	0	genome.wustl.edu	37	22	38323604	38323605	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	22	38323604	38323605	CT	-	DEL	MICALL1	ENST00000215957	human	ensembl	74_37	+1	known	frame_shift_del	c.1652_1653	p.P551fs	0.572:0.475	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM	-	no_errors	MICALL1	HGNC	ENSG00000100139	tier1			129	0	0.00	8	52	86.67
DLG2	0	genome.wustl.edu	37	11	84996326	84996326	+	Nonsense_Mutation	SNP	G	G	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	11	84996326	84996326	G	A	SNP	DLG2	ENST00000376104	human	ensembl	74_37	-1	known	nonsense	c.124	p.Q42*	1.000	pirsf_M-assoc_guanylate_kinase	pfam_PDZ,pfam_GK/Ca_channel_bsu,pfam_MAGUK_PEST_N,pfam_PDZ_assoc,pfam_L27_1,pfam_SH3_2,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG2	HGNC	ENSG00000150672	tier1	-	-	59	0	0.00	43	4	8.51
MOK	0	genome.wustl.edu	37	14	102718302	102718303	+	Frame_Shift_Ins	INS	-	-	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	14	102718302	102718303	-	T	INS	MOK	ENST00000361847	human	ensembl	74_37	-1	known	frame_shift_ins	c.314_313	p.I105fs	0.044:0.007	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MOK	HGNC	ENSG00000080823	tier1			52	0	0.00	22	2	8.33
PPP2R2A	0	genome.wustl.edu	37	8	26218555	26218555	+	Silent	SNP	T	T	G			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	8	26218555	26218555	T	G	SNP	PPP2R2A	ENST00000380737	human	ensembl	74_37	+1	known	silent	c.525	p.A175	0.997	superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	-	no_errors	PPP2R2A	HGNC	ENSG00000221914	tier1	-	-	82	0	0.00	40	27	40.30
SETD1A	0	genome.wustl.edu	37	16	30992058	30992059	+	Splice_Site	DEL	AG	AG	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	16	30992058	30992059	AG	-	DEL	SETD1A	ENST00000262519	human	ensembl	74_37	+1	known	splice_site_del	c.4582-2_4582-1	e15-1	1.000:1.000	-	-	-	no_errors	SETD1A	HGNC	ENSG00000099381	tier1			68	0	0.00	33	31	48.44
TRIM73	0	genome.wustl.edu	37	7	75028240	75028240	+	Missense_Mutation	SNP	T	T	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	7	75028240	75028240	T	C	SNP	TRIM73	ENST00000323819	human	ensembl	74_37	+1	known	missense	c.23	p.L8P	0.061	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM73	HGNC	ENSG00000178809	tier1	rs116984258	-	147	0	0.00	96	12	11.11
ETV3L	0	genome.wustl.edu	37	1	157067778	157067778	+	Silent	SNP	G	G	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	1	157067778	157067778	G	T	SNP	ETV3L	ENST00000454449	human	ensembl	74_37	-1	known	silent	c.489	p.L163	1.000	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ETV3L	HGNC	ENSG00000253831	tier1	-	-	99	0	0.00	45	4	8.16
TOPAZ1	0	genome.wustl.edu	37	3	44346765	44346766	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	3	44346765	44346766	TA	-	DEL	TOPAZ1	ENST00000309765	human	ensembl	74_37	+1	known	frame_shift_del	c.3991_3992	p.Y1331fs	0.462:0.000	NULL	NULL	-	no_errors	TOPAZ1	HGNC	ENSG00000173769	tier1			60	0	0.00	27	12	30.77
ENSG00000244306	0	genome.wustl.edu	37	14	19855845	19855845	+	RNA	SNP	C	C	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	14	19855845	19855845	C	T	SNP	ENSG00000244306	ENST00000551334	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	CTD-2314B22.3	Clone_based_vega_gene	ENSG00000244306	tier1	-	-	9	0	0.00	7	4	36.36
CPNE8	0	genome.wustl.edu	37	12	39268274	39268274	+	Silent	SNP	T	T	C			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	12	39268274	39268274	T	C	SNP	CPNE8	ENST00000331366	human	ensembl	74_37	-1	known	silent	c.138	p.P46	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE8	HGNC	ENSG00000139117	tier1	-	-	96	0	0.00	30	3	9.09
MGME1	0	genome.wustl.edu	37	20	17956397	17956398	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	20	17956397	17956398	AG	-	DEL	MGME1	ENST00000377710	human	ensembl	74_37	+1	known	frame_shift_del	c.582_583	p.D197fs	0.395:0.212	NULL	superfamily_Restrct_endonuc-II-like	-	no_errors	MGME1	HGNC	ENSG00000125871	tier1			53	0	0.00	36	17	32.08
ANKIB1	0	genome.wustl.edu	37	7	92027826	92027826	+	Missense_Mutation	SNP	G	G	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	7	92027826	92027826	G	A	SNP	ANKIB1	ENST00000265742	human	ensembl	74_37	+1	known	missense	c.2833	p.A945T	0.001	NULL	pfam_Znf_C6HC,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Znf_RING,smart_Znf_C6HC,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Ubiquitin-int_motif,pfscan_Znf_RING	-	no_errors	ANKIB1	HGNC	ENSG00000001629	tier1	-	-	50	0	0.00	22	3	12.00
OR1S1	0	genome.wustl.edu	37	11	57982690	57982690	+	Silent	SNP	A	A	T			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	11	57982690	57982690	A	T	SNP	OR1S1	ENST00000309433	human	ensembl	74_37	+1	known	silent	c.474	p.T158	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1S1	HGNC	ENSG00000172774	tier1	-	-	43	0	0.00	10	27	72.97
TONSL	0	genome.wustl.edu	37	8	145660403	145660403	+	Silent	SNP	G	G	A			TCGA-X2-A95T-01A-11D-A37C-09	TCGA-X2-A95T-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eae14da4-7965-48f3-919d-f1a4d02028a4	9de98674-1ec6-4f41-99e7-4628c6bd23f5	8	145660403	145660403	G	A	SNP	TONSL	ENST00000409379	human	ensembl	74_37	-1	known	silent	c.3003	p.D1001	0.999	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TONSL	HGNC	ENSG00000160949	tier1	-	-	95	0	0.00	4	27	87.10
