Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
PAX9	0	genome.wustl.edu	37	14	37145611	37145611	+	Missense_Mutation	SNP	A	A	G			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	14	37145611	37145611	A	G	SNP	PAX9	ENST00000361487	human	ensembl	74_37	+1	known	missense	c.980	p.Q327R	1.000	NULL	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX9	HGNC	ENSG00000198807	tier1	-	-	88	0	0.00	49	10	16.95
ENSG00000201913	0	genome.wustl.edu	37	7	99928404	99928404	+	RNA	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	7	99928404	99928404	G	A	SNP	ENSG00000201913	ENST00000365043	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.025	-	-	-	no_errors	Y_RNA	RFAM	ENSG00000201913	tier1	-	-	47	0	0.00	17	5	22.73
PCDHB2	0	genome.wustl.edu	37	5	140476099	140476099	+	Silent	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	5	140476099	140476099	C	T	SNP	PCDHB2	ENST00000194155	human	ensembl	74_37	+1	known	silent	c.1725	p.T575	0.962	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB2	HGNC	ENSG00000112852	tier1	-	-	96	0	0.00	49	13	20.97
LRIF1	0	genome.wustl.edu	37	1	111492742	111492742	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	1	111492742	111492742	G	T	SNP	LRIF1	ENST00000369763	human	ensembl	74_37	-1	known	missense	c.1600	p.H534N	1.000	NULL	NULL	-	no_errors	LRIF1	HGNC	ENSG00000121931	tier1	-	-	38	0	0.00	16	4	19.05
OR6X1	0	genome.wustl.edu	37	11	123624968	123624968	+	Missense_Mutation	SNP	T	T	C			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	11	123624968	123624968	T	C	SNP	OR6X1	ENST00000327930	human	ensembl	74_37	-1	known	missense	c.259	p.R87G	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6X1	HGNC	ENSG00000221931	tier1	-	-	124	0	0.00	49	15	23.44
CACNA2D3	0	genome.wustl.edu	37	3	55108235	55108254	+	RNA	DEL	ACTGACTGAGATGTTCTCTT	ACTGACTGAGATGTTCTCTT	-			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	ACTGACTGAGATGTTCTCTT	ACTGACTGAGATGTTCTCTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	3	55108235	55108254	ACTGACTGAGATGTTCTCTT	-	DEL	CACNA2D3	ENST00000478261	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.994:0.994:0.994:0.994:0.994:0.994:0.994:0.994:0.994:0.994:0.994:0.994:0.995:0.995:0.995:0.996:0.996:0.997:0.997:0.998	-	-	-	no_errors	CACNA2D3	HGNC	ENSG00000157445	tier1			NA	NA	NA	NA	NA	NA
ZNF536	0	genome.wustl.edu	37	19	30935152	30935152	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	19	30935152	30935152	C	T	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	missense	c.683	p.P228L	0.148	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597	tier1	-	-	27	0	0.00	6	8	57.14
DCTN4	0	genome.wustl.edu	37	5	150095215	150095215	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	5	150095215	150095215	G	T	SNP	DCTN4	ENST00000446090	human	ensembl	74_37	-1	known	missense	c.1102	p.P368T	1.000	pfam_Dynactin_p62	pfam_Dynactin_p62	-	no_errors	DCTN4	HGNC	ENSG00000132912	tier1	-	-	104	0	0.00	49	5	9.26
MME	0	genome.wustl.edu	37	3	154834539	154834539	+	Frame_Shift_Del	DEL	C	C	-			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	3	154834539	154834539	C	-	DEL	MME	ENST00000360490	human	ensembl	74_37	+1	known	frame_shift_del	c.526	p.Q176fs	0.001	pfam_Peptidase_M13_N	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	MME	HGNC	ENSG00000196549	tier1			66	0	0.00	38	11	22.45
TMEM163	0	genome.wustl.edu	37	2	135260492	135260492	+	Missense_Mutation	SNP	T	T	G			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	2	135260492	135260492	T	G	SNP	TMEM163	ENST00000281924	human	ensembl	74_37	-1	known	missense	c.535	p.T179P	0.932	NULL	NULL	-	no_errors	TMEM163	HGNC	ENSG00000152128	tier1	-	-	161	0	0.00	76	17	18.28
CARM1P1	0	genome.wustl.edu	37	9	2943570	2943570	+	RNA	SNP	A	A	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	9	2943570	2943570	A	T	SNP	CARM1P1	ENST00000492533	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CARM1P1	HGNC	ENSG00000227835	tier1	-	-	151	0	0.00	50	25	32.89
ENSG00000221388	0	genome.wustl.edu	37	2	213628371	213628372	+	RNA	INS	-	-	TGTGTG			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	2	213628371	213628372	-	TGTGTG	INS	ENSG00000221388	ENST00000408461	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.068:0.063	-	-	-	no_errors	AC093865.1	Clone_based_ensembl_gene	ENSG00000221388	tier1			NA	NA	NA	NA	NA	NA
RGMB-AS1	0	genome.wustl.edu	37	5	98106505	98106506	+	RNA	INS	-	-	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	5	98106505	98106506	-	A	INS	RGMB-AS1	ENST00000498871	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005:0.009	-	-	-	no_errors	RGMB-AS1	HGNC	ENSG00000246763	tier1			26	0	0.00	20	3	13.04
PRPF38A	0	genome.wustl.edu	37	1	52874411	52874412	+	RNA	INS	-	-	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	1	52874411	52874412	-	T	INS	PRPF38A	ENST00000487160	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.865	-	-	-	no_errors	PRPF38A	HGNC	ENSG00000134748	tier1			73	0	0.00	20	27	57.45
TMEM67	0	genome.wustl.edu	37	8	94827670	94827670	+	Missense_Mutation	SNP	C	C	G			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	8	94827670	94827670	C	G	SNP	TMEM67	ENST00000453321	human	ensembl	74_37	+1	known	missense	c.2902	p.Q968E	1.000	pfam_Meckelin	pfam_Meckelin,superfamily_Growth_fac_rcpt_N_dom	-	no_errors	TMEM67	HGNC	ENSG00000164953	tier1	-	-	86	0	0.00	48	21	30.43
ABHD2	0	genome.wustl.edu	37	15	89738609	89738609	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	15	89738609	89738609	G	T	SNP	ABHD2	ENST00000352732	human	ensembl	74_37	+1	known	missense	c.1233	p.K411N	0.814	NULL	pfam_AB_hydrolase_1,pirsf_AB-Hydro_YheT	-	no_errors	ABHD2	HGNC	ENSG00000140526	tier1	-	-	84	0	0.00	47	5	9.62
TPP2	0	genome.wustl.edu	37	13	103295726	103295726	+	Frame_Shift_Del	DEL	A	A	-			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	13	103295726	103295726	A	-	DEL	TPP2	ENST00000376065	human	ensembl	74_37	+1	known	frame_shift_del	c.2175	p.G726fs	0.989	NULL	pfam_Peptidase_S8/S53_dom,pfam_Peptidase_S8A_TPPII,superfamily_Peptidase_S8/S53_dom,prints_Peptidase_S8_subtilisin-rel	-	no_errors	TPP2	HGNC	ENSG00000134900	tier1			60	0	0.00	15	2	11.76
DNAH2	0	genome.wustl.edu	37	17	7644169	7644169	+	Nonsense_Mutation	SNP	C	C	G			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	17	7644169	7644169	C	G	SNP	DNAH2	ENST00000389173	human	ensembl	74_37	+1	known	nonsense	c.1548	p.Y516*	1.000	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH2	HGNC	ENSG00000183914	tier1	-	-	77	0	0.00	41	25	37.88
ANKEF1	0	genome.wustl.edu	37	20	10033785	10033785	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	20	10033785	10033785	G	T	SNP	ANKEF1	ENST00000378380	human	ensembl	74_37	+1	known	missense	c.1896	p.K632N	0.908	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EF_hand_dom,prints_Ankyrin_rpt	-	no_errors	ANKEF1	HGNC	ENSG00000132623	tier1	-	-	85	0	0.00	48	10	17.24
WNK2	0	genome.wustl.edu	37	9	96080210	96080210	+	Silent	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	9	96080210	96080210	C	T	SNP	WNK2	ENST00000297954	human	ensembl	74_37	+1	known	silent	c.6795	p.P2265	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK2	HGNC	ENSG00000165238	tier1	-	-	111	0	0.00	38	29	43.28
SFXN1	0	genome.wustl.edu	37	5	174936049	174936049	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	5	174936049	174936049	C	T	SNP	SFXN1	ENST00000321442	human	ensembl	74_37	+1	known	missense	c.179	p.P60L	0.203	pfam_Mtc,tigrfam_Mtc	pfam_Mtc,tigrfam_Mtc	-	no_errors	SFXN1	HGNC	ENSG00000164466	tier1	-	-	95	0	0.00	50	10	16.67
SRPX	0	genome.wustl.edu	37	X	38031204	38031204	+	Silent	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	X	38031204	38031204	C	T	SNP	SRPX	ENST00000378533	human	ensembl	74_37	-1	known	silent	c.456	p.T152	0.003	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Hyalin,pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Hyalin,pfscan_Sushi_SCR_CCP	-	no_errors	SRPX	HGNC	ENSG00000101955	tier1	-	-	83	0	0.00	25	15	37.50
MTM1	0	genome.wustl.edu	37	X	149840059	149840059	+	Silent	SNP	T	T	C			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	X	149840059	149840059	T	C	SNP	MTM1	ENST00000370396	human	ensembl	74_37	+1	known	silent	c.1803	p.T601	0.075	NULL	pfam_Myotubularin-like_Pase_dom,pfam_GRAM,smart_GRAM,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTM1	HGNC	ENSG00000171100	tier1	-	-	55	0	0.00	18	3	14.29
EXD3	0	genome.wustl.edu	37	9	140267432	140267432	+	Silent	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	9	140267432	140267432	G	A	SNP	EXD3	ENST00000340951	human	ensembl	74_37	-1	known	silent	c.387	p.F129	1.000	NULL	pfam_Mut7-C_RNAse_dom,pfam_3'-5'_exonuclease_dom,superfamily_RNaseH-like_dom,smart_3'-5'_exonuclease_dom	-	no_errors	EXD3	HGNC	ENSG00000187609	tier1	-	-	144	0	0.00	62	23	26.74
MUC16	0	genome.wustl.edu	37	19	9084637	9084637	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	19	9084637	9084637	G	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.7178	p.P2393L	0.042	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	113	0	0.00	35	10	22.22
AGXT2	0	genome.wustl.edu	37	5	35033586	35033586	+	Silent	SNP	A	A	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	5	35033586	35033586	A	T	SNP	AGXT2	ENST00000231420	human	ensembl	74_37	-1	known	silent	c.654	p.P218	0.300	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase	-	no_errors	AGXT2	HGNC	ENSG00000113492	tier1	-	-	115	0	0.00	50	14	21.88
EML5	0	genome.wustl.edu	37	14	89110777	89110777	+	Missense_Mutation	SNP	C	C	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	14	89110777	89110777	C	A	SNP	EML5	ENST00000554922	human	ensembl	74_37	-1	known	missense	c.4107	p.E1369D	1.000	pfam_HELP	pfam_WD40_repeat,pfam_HELP,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML5	HGNC	ENSG00000165521	tier1	-	-	75	0	0.00	46	8	14.81
CFTR	0	genome.wustl.edu	37	7	117199633	117199633	+	Missense_Mutation	SNP	A	A	G			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	7	117199633	117199633	A	G	SNP	CFTR	ENST00000003084	human	ensembl	74_37	+1	known	missense	c.1508	p.K503R	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_cAMP_cl_channel	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM,tigrfam_cAMP_cl_channel	-	no_errors	CFTR	HGNC	ENSG00000001626	tier1	-	-	96	0	0.00	28	11	28.21
ARHGEF38	0	genome.wustl.edu	37	4	106474052	106474052	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	4	106474052	106474052	G	T	SNP	ARHGEF38	ENST00000265154	human	ensembl	74_37	+1	known	missense	c.130	p.G44W	0.977	NULL	pfam_DH-domain,superfamily_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF38	HGNC	ENSG00000236699	tier1	-	-	82	0	0.00	46	4	8.00
EPHA7	0	genome.wustl.edu	37	6	94066667	94066667	+	Silent	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	6	94066667	94066667	G	A	SNP	EPHA7	ENST00000369303	human	ensembl	74_37	-1	known	silent	c.1092	p.T364	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA7	HGNC	ENSG00000135333	tier1	rs200560907	-	152	0	0.00	46	9	16.36
PRLR	0	genome.wustl.edu	37	5	35068325	35068325	+	Missense_Mutation	SNP	A	A	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	5	35068325	35068325	A	T	SNP	PRLR	ENST00000382002	human	ensembl	74_37	-1	known	missense	c.848	p.L283Q	1.000	NULL	pfam_Growth/epo_recpt_lig-bind,pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	PRLR	HGNC	ENSG00000113494	tier1	-	-	152	0	0.00	61	22	26.51
MIR646	0	genome.wustl.edu	37	20	58883614	58883614	+	RNA	SNP	A	A	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	20	58883614	58883614	A	T	SNP	MIR646	ENST00000385067	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MIR646	HGNC	ENSG00000207802	tier1	-	-	72	0	0.00	76	7	8.43
GRIN3A	0	genome.wustl.edu	37	9	104449456	104449456	+	Silent	SNP	T	T	C			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	9	104449456	104449456	T	C	SNP	GRIN3A	ENST00000361820	human	ensembl	74_37	-1	known	silent	c.726	p.L242	1.000	superfamily_Peripla_BP_I	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,prints_NMDA_rcpt	-	no_errors	GRIN3A	HGNC	ENSG00000198785	tier1	-	-	76	0	0.00	23	7	23.33
MUC6	0	genome.wustl.edu	37	11	1018666	1018666	+	Missense_Mutation	SNP	G	G	C			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	11	1018666	1018666	G	C	SNP	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	missense	c.4135	p.Q1379E	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956	tier1	-	-	180	0	0.00	58	27	31.76
CTRC	0	genome.wustl.edu	37	1	15768968	15768968	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	1	15768968	15768968	G	A	SNP	CTRC	ENST00000375949	human	ensembl	74_37	+1	known	missense	c.256	p.V86M	0.336	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CTRC	HGNC	ENSG00000162438	tier1	-	-	104	0	0.00	16	42	72.41
SMARCA1	0	genome.wustl.edu	37	X	128605244	128605245	+	Frame_Shift_Ins	INS	-	-	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	X	128605244	128605245	-	T	INS	SMARCA1	ENST00000371122	human	ensembl	74_37	-1	known	frame_shift_ins	c.2502_2501	p.I835fs	1.000:1.000	pfam_ISWI_HAND-dom,superfamily_ISWI_HAND-dom	pfam_SNF2_N,pfam_SLIDE,pfam_ISWI_HAND-dom,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,superfamily_ISWI_HAND-dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_SANT/Myb,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCA1	HGNC	ENSG00000102038	tier1			46	0	0.00	23	2	8.00
VEZT	0	genome.wustl.edu	37	12	95693942	95693942	+	Silent	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	12	95693942	95693942	C	T	SNP	VEZT	ENST00000436874	human	ensembl	74_37	+1	known	silent	c.1833	p.A611	1.000	NULL	NULL	-	no_errors	VEZT	HGNC	ENSG00000028203	tier1	-	-	150	0	0.00	50	18	26.47
SEMA3C	0	genome.wustl.edu	37	7	80374308	80374308	+	Missense_Mutation	SNP	C	C	G			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	7	80374308	80374308	C	G	SNP	SEMA3C	ENST00000544525	human	ensembl	74_37	-1	known	missense	c.2212	p.D738H	0.521	NULL	pfam_Semap_dom,pfam_Ig_I-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3C	HGNC	ENSG00000075223	tier1	-	-	71	0	0.00	24	15	38.46
CD200	0	genome.wustl.edu	37	3	112068589	112068589	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	3	112068589	112068589	G	T	SNP	CD200	ENST00000473539	human	ensembl	74_37	+1	known	missense	c.800	p.S267I	0.856	NULL	pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	CD200	HGNC	ENSG00000091972	tier1	-	-	128	0	0.00	33	43	56.58
C19orf26	0	genome.wustl.edu	37	19	1235510	1235510	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	19	1235510	1235510	G	T	SNP	C19orf26	ENST00000382477	human	ensembl	74_37	-1	known	missense	c.282	p.H94Q	1.000	NULL	NULL	-	no_errors	C19orf26	HGNC	ENSG00000099625	tier1	-	-	65	0	0.00	39	4	9.30
ACSL6	0	genome.wustl.edu	37	5	131290003	131290003	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	5	131290003	131290003	G	T	SNP	ACSL6	ENST00000296869	human	ensembl	74_37	-1	known	missense	c.2093	p.T698K	1.000	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL6	HGNC	ENSG00000164398	tier1	-	-	44	0	0.00	19	3	13.64
FAT2	0	genome.wustl.edu	37	5	150930375	150930375	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	5	150930375	150930375	G	A	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	missense	c.4354	p.R1452C	0.053	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570	tier1	-	-	76	0	0.00	27	19	40.43
SLCO2B1	0	genome.wustl.edu	37	11	74911337	74911337	+	Silent	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	11	74911337	74911337	G	A	SNP	SLCO2B1	ENST00000289575	human	ensembl	74_37	+1	known	silent	c.1668	p.T556	0.994	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO2B1	HGNC	ENSG00000137491	tier1	-	-	51	0	0.00	6	14	70.00
GBA	0	genome.wustl.edu	37	1	155205042	155205042	+	Silent	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	1	155205042	155205042	C	T	SNP	GBA	ENST00000327247	human	ensembl	74_37	-1	known	silent	c.1449	p.L483	1.000	pfam_Glyco_hydro_30	pfam_Glyco_hydro_30,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_30	-	no_errors	GBA	HGNC	ENSG00000177628	tier1	-	-	128	0	0.00	39	17	30.36
MYH7	0	genome.wustl.edu	37	14	23902315	23902315	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	14	23902315	23902315	C	T	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	missense	c.323	p.R108H	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054	tier1	-	-	116	0	0.00	59	18	23.38
KIF4A	0	genome.wustl.edu	37	X	69595981	69595981	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	X	69595981	69595981	G	A	SNP	KIF4A	ENST00000374403	human	ensembl	74_37	+1	known	missense	c.1955	p.R652H	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF4A	HGNC	ENSG00000090889	tier1	rs35473790	-	78	0	0.00	62	22	26.19
LOC440905	0	genome.wustl.edu	37	2	130807905	130807905	+	RNA	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	2	130807905	130807905	G	T	SNP	LOC440905	ENST00000325390	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.233	-	-	-	no_errors	AC018865.8	Clone_based_vega_gene	ENSG00000180178	tier1	rs201541587	-	44	0	0.00	26	5	16.13
CD22	0	genome.wustl.edu	37	19	35835957	35835957	+	Missense_Mutation	SNP	G	G	C			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	19	35835957	35835957	G	C	SNP	CD22	ENST00000085219	human	ensembl	74_37	+1	known	missense	c.2136	p.W712C	1.000	NULL	pfam_Immunoglobulin,pfam_Ig_I-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CD22	HGNC	ENSG00000012124	tier1	-	-	78	0	0.00	40	17	29.82
CTNND2	0	genome.wustl.edu	37	5	11084014	11084014	+	Missense_Mutation	SNP	C	C	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	5	11084014	11084014	C	A	SNP	CTNND2	ENST00000513588	human	ensembl	74_37	-1	known	missense	c.1953	p.E651D	1.000	superfamily_ARM-type_fold	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	CTNND2	HGNC	ENSG00000169862	tier1	-	-	161	0	0.00	84	25	22.94
TCAIM	0	genome.wustl.edu	37	3	44437985	44437985	+	Silent	SNP	A	A	G			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	3	44437985	44437985	A	G	SNP	TCAIM	ENST00000342649	human	ensembl	74_37	+1	known	silent	c.789	p.A263	0.000	NULL	NULL	-	no_errors	TCAIM	HGNC	ENSG00000179152	tier1	-	-	73	0	0.00	13	32	71.11
MRTO4	0	genome.wustl.edu	37	1	19578360	19578360	+	RNA	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	1	19578360	19578360	G	T	SNP	MRTO4	ENST00000493700	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.695	-	-	-	no_errors	MRTO4	HGNC	ENSG00000053372	tier1	-	-	36	0	0.00	23	4	14.81
SKIDA1	0	genome.wustl.edu	37	10	21805466	21805467	+	In_Frame_Ins	INS	-	-	CCTCCT			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	10	21805466	21805467	-	CCTCCT	INS	SKIDA1	ENST00000449193	human	ensembl	74_37	-1	known	in_frame_ins	c.1286_1285	p.429in_frame_insEE	0.998:1.000	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	SKIDA1	HGNC	ENSG00000180592	tier1			NA	NA	NA	NA	NA	NA
FAM160A1	0	genome.wustl.edu	37	4	152559829	152559829	+	Missense_Mutation	SNP	C	C	G			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	4	152559829	152559829	C	G	SNP	FAM160A1	ENST00000435205	human	ensembl	74_37	+1	known	missense	c.1147	p.L383V	1.000	pfam_RetinoicA-induced_16-like	pfam_RetinoicA-induced_16-like	-	no_errors	FAM160A1	HGNC	ENSG00000164142	tier1	-	-	188	0	0.00	85	27	24.11
FAT2	0	genome.wustl.edu	37	5	150908764	150908764	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	5	150908764	150908764	G	A	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	missense	c.10001	p.A3334V	0.922	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570	tier1	-	-	85	0	0.00	42	4	8.70
SGIP1	0	genome.wustl.edu	37	1	67109411	67109412	+	RNA	DEL	TG	TG	-			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	1	67109411	67109412	TG	-	DEL	SGIP1	ENST00000483060	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.058:0.051	-	-	-	no_errors	SGIP1	HGNC	ENSG00000118473	tier1			44	0	0.00	19	4	17.39
RARS2	0	genome.wustl.edu	37	6	88228563	88228563	+	Silent	SNP	C	C	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	6	88228563	88228563	C	A	SNP	RARS2	ENST00000369536	human	ensembl	74_37	-1	known	silent	c.1284	p.G428	0.651	pfam_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-ligase_Ia	pfam_Arg-tRNA-synth_Ia_core,pfam_DALR_anticod-bd,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Arg-tRNA-synth_N,smart_DALR_anticod-bd,prints_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-ligase_Ia	-	no_errors	RARS2	HGNC	ENSG00000146282	tier1	-	-	86	0	0.00	14	38	73.08
KLK9	0	genome.wustl.edu	37	19	51506971	51506971	+	Missense_Mutation	SNP	C	C	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	19	51506971	51506971	C	A	SNP	KLK9	ENST00000250366	human	ensembl	74_37	-1	known	missense	c.592	p.G198C	0.994	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK9	Uniprot_gn	ENSG00000269741	tier1	-	-	87	0	0.00	56	9	13.85
ANKRD62	0	genome.wustl.edu	37	18	12115475	12115475	+	Silent	SNP	T	T	G			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	18	12115475	12115475	T	G	SNP	ANKRD62	ENST00000314074	human	ensembl	74_37	+1	known	silent	c.1140	p.P380	0.001	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD62	HGNC	ENSG00000181626	tier1	-	-	107	0	0.00	16	4	20.00
PIK3R3	0	genome.wustl.edu	37	1	46546420	46546420	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	1	46546420	46546420	G	T	SNP	PIK3R3	ENST00000540385	human	ensembl	74_37	-1	known	missense	c.247	p.L83I	1.000	NULL	pfam_SH2,smart_SH2,pfscan_SH2,prints_PI3kinase_P85,prints_SH2	-	no_errors	PIK3R3	HGNC	ENSG00000117461	tier1	-	-	119	0	0.00	53	16	23.19
MUC4	0	genome.wustl.edu	37	3	195513887	195513887	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	3	195513887	195513887	G	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.4564	p.P1522S	0.000	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	-	-	55	0	0.00	63	18	22.22
ZNF215	0	genome.wustl.edu	37	11	6977493	6977493	+	Missense_Mutation	SNP	C	C	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	11	6977493	6977493	C	A	SNP	ZNF215	ENST00000278319	human	ensembl	74_37	+1	known	missense	c.1285	p.H429N	0.994	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF215	HGNC	ENSG00000149054	tier1	-	-	134	0	0.00	46	14	23.33
DOCK11	0	genome.wustl.edu	37	X	117677515	117677515	+	Nonsense_Mutation	SNP	C	C	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	X	117677515	117677515	C	A	SNP	DOCK11	ENST00000276202	human	ensembl	74_37	+1	known	nonsense	c.351	p.Y117*	1.000	pfam_DOCK_C/D_N	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK11	HGNC	ENSG00000147251	tier1	-	-	146	0	0.00	58	96	61.94
SLC5A10	0	genome.wustl.edu	37	17	18880226	18880226	+	Missense_Mutation	SNP	C	C	G			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	17	18880226	18880226	C	G	SNP	SLC5A10	ENST00000395647	human	ensembl	74_37	+1	known	missense	c.906	p.I302M	1.000	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A10	HGNC	ENSG00000154025	tier1	-	-	72	0	0.00	111	26	18.84
DDX46	0	genome.wustl.edu	37	5	134106633	134106633	+	Missense_Mutation	SNP	A	A	G			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	5	134106633	134106633	A	G	SNP	DDX46	ENST00000452510	human	ensembl	74_37	+1	known	missense	c.391	p.K131E	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX46	HGNC	ENSG00000145833	tier1	-	-	158	0	0.00	51	25	32.89
PDE1A	0	genome.wustl.edu	37	2	183106701	183106701	+	RNA	SNP	T	T	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	2	183106701	183106701	T	A	SNP	PDE1A	ENST00000482538	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PDE1A	HGNC	ENSG00000115252	tier1	-	-	110	1	0.90	27	23	46.00
ESYT2	0	genome.wustl.edu	37	7	158534291	158534291	+	Silent	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	7	158534291	158534291	C	T	SNP	ESYT2	ENST00000251527	human	ensembl	74_37	-1	known	silent	c.2172	p.P724	0.999	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	ESYT2	HGNC	ENSG00000117868	tier1	-	-	149	0	0.00	14	16	53.33
ENSG00000266651	0	genome.wustl.edu	37	17	16344166	16344167	+	RNA	INS	-	-	AA			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	17	16344166	16344167	-	AA	INS	ENSG00000266651	ENST00000585048	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-138I1.3	Clone_based_vega_gene	ENSG00000266651	tier1			10	0	0.00	15	4	21.05
ANK3	0	genome.wustl.edu	37	10	61829275	61829275	+	Frame_Shift_Del	DEL	G	G	-			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	10	61829275	61829275	G	-	DEL	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	frame_shift_del	c.11364	p.N3788fs	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150	tier1			48	0	0.00	15	2	11.76
UNC13C	0	genome.wustl.edu	37	15	54592542	54592542	+	Silent	SNP	T	T	C			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	15	54592542	54592542	T	C	SNP	UNC13C	ENST00000260323	human	ensembl	74_37	+1	known	silent	c.4239	p.Y1413	0.999	NULL	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13C	HGNC	ENSG00000137766	tier1	-	-	107	0	0.00	70	13	15.48
EFCAB12	0	genome.wustl.edu	37	3	129137259	129137259	+	Silent	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	3	129137259	129137259	G	T	SNP	EFCAB12	ENST00000326085	human	ensembl	74_37	-1	known	silent	c.519	p.R173	0.000	NULL	pfscan_EF_hand_dom	-	no_errors	EFCAB12	HGNC	ENSG00000172771	tier1	-	-	41	0	0.00	21	16	43.24
SNHG16	0	genome.wustl.edu	37	17	74557646	74557646	+	RNA	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	17	74557646	74557646	G	A	SNP	SNHG16	ENST00000591956	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG16	HGNC	ENSG00000163597	tier1	-	-	135	0	0.00	135	39	22.29
ANKRD62	0	genome.wustl.edu	37	18	12115472	12115472	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	18	12115472	12115472	G	T	SNP	ANKRD62	ENST00000314074	human	ensembl	74_37	+1	known	missense	c.1137	p.L379F	0.002	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD62	HGNC	ENSG00000181626	tier1	-	-	102	0	0.00	15	5	25.00
ENSG00000221295	0	genome.wustl.edu	37	8	43415844	43415844	+	RNA	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	8	43415844	43415844	G	T	SNP	ENSG00000221295	ENST00000408368	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AC134698.1	Clone_based_ensembl_gene	ENSG00000221295	tier1	-	-	173	1	0.57	80	29	26.61
PRRC2A	0	genome.wustl.edu	37	6	31602284	31602284	+	Nonsense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	6	31602284	31602284	G	T	SNP	PRRC2A	ENST00000376007	human	ensembl	74_37	+1	known	nonsense	c.4885	p.E1629*	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2A	HGNC	ENSG00000204469	tier1	-	-	66	0	0.00	35	4	10.26
ZNF488	0	genome.wustl.edu	37	10	48371038	48371038	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	10	48371038	48371038	G	T	SNP	ZNF488	ENST00000395702	human	ensembl	74_37	+1	known	missense	c.506	p.R169L	0.559	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF488	HGNC	ENSG00000165388	tier1	-	-	78	0	0.00	24	13	35.14
SRL	0	genome.wustl.edu	37	16	4257559	4257559	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	16	4257559	4257559	G	A	SNP	SRL	ENST00000572111	human	ensembl	74_37	-1	known	missense	c.608	p.A203V	0.000	NULL	NULL	-	no_errors	SRL	HGNC	ENSG00000185739	tier1	-	-	77	0	0.00	73	13	15.12
GOLGA2	0	genome.wustl.edu	37	9	131028291	131028291	+	Frame_Shift_Del	DEL	T	T	-			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	9	131028291	131028291	T	-	DEL	GOLGA2	ENST00000421699	human	ensembl	74_37	-1	known	frame_shift_del	c.609	p.E204fs	0.997	NULL	superfamily_CofA_tubulin-bd	-	no_errors	GOLGA2	HGNC	ENSG00000167110	tier1			215	0	0.00	68	45	39.82
FREM2	0	genome.wustl.edu	37	13	39438633	39438633	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	13	39438633	39438633	C	T	SNP	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	missense	c.7873	p.R2625C	1.000	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893	tier1	-	-	87	0	0.00	39	31	44.29
ARL9	0	genome.wustl.edu	37	4	57389863	57389863	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	4	57389863	57389863	G	T	SNP	ARL9	ENST00000360096	human	ensembl	74_37	+1	known	missense	c.193	p.D65Y	1.000	pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase	pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase	-	no_errors	ARL9	HGNC	ENSG00000196503	tier1	-	-	104	0	0.00	43	4	8.51
TMC6	0	genome.wustl.edu	37	17	76117083	76117083	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	17	76117083	76117083	C	T	SNP	TMC6	ENST00000589553	human	ensembl	74_37	-1	known	missense	c.865	p.A289T	0.000	NULL	NULL	-	no_errors	TMC6	HGNC	ENSG00000141524	tier1	-	-	137	1	0.72	85	53	38.13
TNFRSF11B	0	genome.wustl.edu	37	8	119945327	119945327	+	Silent	SNP	T	T	C			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	8	119945327	119945327	T	C	SNP	TNFRSF11B	ENST00000297350	human	ensembl	74_37	-1	known	silent	c.243	p.L81	0.845	pirsf_TNFR_11B,pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,prints_TNFR_11,pfscan_TNFR/NGFR_Cys_rich_reg	pirsf_TNFR_11B,pfam_TNFR/NGFR_Cys_rich_reg,pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,prints_TNFR_11B,prints_TNFR_11,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	TNFRSF11B	HGNC	ENSG00000164761	tier1	-	-	51	0	0.00	36	9	20.00
GAD2	0	genome.wustl.edu	37	10	26518625	26518625	+	Silent	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	10	26518625	26518625	C	T	SNP	GAD2	ENST00000259271	human	ensembl	74_37	+1	known	silent	c.759	p.I253	0.538	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	GAD2	HGNC	ENSG00000136750	tier1	rs145045666	-	71	0	0.00	17	36	67.92
ARIH2OS	0	genome.wustl.edu	37	3	48955912	48955920	+	In_Frame_Del	DEL	GGGGTGTAG	GGGGTGTAG	-			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	GGGGTGTAG	GGGGTGTAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	3	48955912	48955920	GGGGTGTAG	-	DEL	ARIH2OS	ENST00000408959	human	ensembl	74_37	-1	known	in_frame_del	c.671_663	p.YTP222in_frame_del	0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.001:0.000	NULL	NULL	-	no_errors	ARIH2OS	HGNC	ENSG00000221883	tier1			NA	NA	NA	NA	NA	NA
CDH12	0	genome.wustl.edu	37	5	21975456	21975456	+	Silent	SNP	T	T	C			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	5	21975456	21975456	T	C	SNP	CDH12	ENST00000382254	human	ensembl	74_37	-1	known	silent	c.270	p.K90	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH12	HGNC	ENSG00000154162	tier1	-	-	566	0	0.00	171	94	35.47
SFI1	0	genome.wustl.edu	37	22	32007165	32007165	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	22	32007165	32007165	G	T	SNP	SFI1	ENST00000400288	human	ensembl	74_37	+1	known	missense	c.2291	p.C764F	0.000	NULL	superfamily_Cyclin-like	-	no_errors	SFI1	HGNC	ENSG00000198089	tier1	-	-	74	0	0.00	29	4	12.12
LOXHD1	0	genome.wustl.edu	37	18	44063558	44063558	+	Silent	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	18	44063558	44063558	G	A	SNP	LOXHD1	ENST00000536736	human	ensembl	74_37	-1	known	silent	c.6147	p.Y2049	0.057	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,pfscan_PLAT/LH2_dom	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom	-	no_errors	LOXHD1	HGNC	ENSG00000167210	tier1	-	-	104	0	0.00	53	19	26.39
VPS51	0	genome.wustl.edu	37	11	64864491	64864491	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	11	64864491	64864491	G	T	SNP	VPS51	ENST00000279281	human	ensembl	74_37	+1	known	missense	c.250	p.A84S	1.000	pfam_COG8,pfam_Vacuolar_sorting-assoc_54,pfam_COG_su2_N	pfam_COG8,pfam_Vacuolar_sorting-assoc_54,pfam_COG_su2_N,pfam_RZZ-complex_Zw10,superfamily_Cullin_repeat-like_dom	-	no_errors	VPS51	HGNC	ENSG00000149823	tier1	-	-	63	0	0.00	26	4	12.90
ESR2	0	genome.wustl.edu	37	14	64724010	64724010	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	14	64724010	64724010	C	T	SNP	ESR2	ENST00000341099	human	ensembl	74_37	-1	known	missense	c.1025	p.G342E	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Estrogen_rcpt_beta_N,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	ESR2	HGNC	ENSG00000140009	tier1	-	-	88	0	0.00	28	20	41.67
LHFPL1	0	genome.wustl.edu	37	X	111914311	111914311	+	Missense_Mutation	SNP	A	A	G			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	X	111914311	111914311	A	G	SNP	LHFPL1	ENST00000371968	human	ensembl	74_37	-1	known	missense	c.308	p.V103A	1.000	pfam_Lipome_HGMIC_fus_partner-like	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	LHFPL1	HGNC	ENSG00000182508	tier1	-	-	22	0	0.00	5	44	89.80
ZNF292	0	genome.wustl.edu	37	6	87966771	87966771	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	6	87966771	87966771	G	T	SNP	ZNF292	ENST00000369577	human	ensembl	74_37	+1	known	missense	c.3424	p.A1142S	0.893	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994	tier1	-	-	84	0	0.00	42	4	8.70
GAR1	0	genome.wustl.edu	37	4	110743600	110743600	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	4	110743600	110743600	G	A	SNP	GAR1	ENST00000226796	human	ensembl	74_37	+1	known	missense	c.527	p.R176Q	0.692	pfam_H/ACA_rnp_Gar1/Naf1	pfam_H/ACA_rnp_Gar1/Naf1,superfamily_Transl_B-barrel	-	no_errors	GAR1	HGNC	ENSG00000109534	tier1	-	-	88	0	0.00	49	22	30.99
CCL3	0	genome.wustl.edu	37	17	34416094	34416094	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	17	34416094	34416094	C	T	SNP	CCL3	ENST00000225245	human	ensembl	74_37	-1	known	missense	c.203	p.R68Q	0.587	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL3	HGNC	ENSG00000006075	tier1	-	-	369	0	0.00	191	31	13.96
TSGA10	0	genome.wustl.edu	37	2	99726018	99726018	+	RNA	SNP	A	A	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	2	99726018	99726018	A	T	SNP	TSGA10	ENST00000471174	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TSGA10	HGNC	ENSG00000135951	tier1	-	-	73	0	0.00	53	12	18.46
IL25	0	genome.wustl.edu	37	14	23844881	23844881	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	14	23844881	23844881	G	A	SNP	IL25	ENST00000329715	human	ensembl	74_37	+1	known	missense	c.326	p.R109H	0.940	pfam_IL-17_fam	pfam_IL-17_fam	-	no_errors	IL25	HGNC	ENSG00000166090	tier1	-	-	103	0	0.00	59	14	19.18
FAT3	0	genome.wustl.edu	37	11	92495307	92495307	+	Frame_Shift_Del	DEL	T	T	-			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	11	92495307	92495307	T	-	DEL	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	frame_shift_del	c.3955	p.F1319fs	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1			86	0	0.00	13	23	63.89
CABIN1	0	genome.wustl.edu	37	22	24459595	24459614	+	Splice_Site	DEL	TTCCTGGCGCTGCAGGTTAG	TTCCTGGCGCTGCAGGTTAG	-			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	TTCCTGGCGCTGCAGGTTAG	TTCCTGGCGCTGCAGGTTAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	22	24459595	24459614	TTCCTGGCGCTGCAGGTTAG	-	DEL	CABIN1	ENST00000263119	human	ensembl	74_37	+1	known	splice_site_del	c.1884+16_1884+1	e14-1	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.179:0.730:0.999:1.000:1.000:1.000:1.000:1.000:1.000:0.613:0.610:0.813	-	-	-	no_errors	CABIN1	HGNC	ENSG00000099991	tier1			NA	NA	NA	NA	NA	NA
LINC01001	0	genome.wustl.edu	37	11	134599	134599	+	RNA	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	11	134599	134599	G	T	SNP	LINC01001	ENST00000527683	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.881	-	-	-	no_errors	LINC01001	HGNC	ENSG00000230724	tier1	-	-	100	0	0.00	38	5	11.63
USP49	0	genome.wustl.edu	37	6	41774551	41774551	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	6	41774551	41774551	G	T	SNP	USP49	ENST00000373009	human	ensembl	74_37	-1	known	missense	c.171	p.H57Q	1.000	pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP	pfam_Peptidase_C19/C67,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP49	HGNC	ENSG00000164663	tier1	-	-	98	0	0.00	42	4	8.70
RAB3GAP2	0	genome.wustl.edu	37	1	220355632	220355632	+	Missense_Mutation	SNP	C	C	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	1	220355632	220355632	C	A	SNP	RAB3GAP2	ENST00000358951	human	ensembl	74_37	-1	known	missense	c.2277	p.L759F	1.000	NULL	superfamily_WD40_repeat_dom	-	no_errors	RAB3GAP2	HGNC	ENSG00000118873	tier1	-	-	72	0	0.00	8	22	73.33
YTHDC1	0	genome.wustl.edu	37	4	69202908	69202908	+	Silent	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	4	69202908	69202908	C	T	SNP	YTHDC1	ENST00000344157	human	ensembl	74_37	-1	known	silent	c.720	p.E240	0.914	NULL	pfam_YTH_domain,pfscan_YTH_domain	-	no_errors	YTHDC1	HGNC	ENSG00000083896	tier1	-	-	52	0	0.00	23	4	14.81
ENSG00000215022	0	genome.wustl.edu	37	6	13281385	13281385	+	RNA	SNP	G	G	C			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	6	13281385	13281385	G	C	SNP	ENSG00000215022	ENST00000606150	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.308	-	-	-	no_errors	RP1-257A7.4	Clone_based_vega_gene	ENSG00000215022	tier1	-	-	55	0	0.00	15	10	40.00
ADAMTSL4	0	genome.wustl.edu	37	1	150529523	150529523	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	1	150529523	150529523	C	T	SNP	ADAMTSL4	ENST00000369039	human	ensembl	74_37	+1	known	missense	c.1927	p.P643S	0.108	NULL	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	ADAMTSL4	HGNC	ENSG00000143382	tier1	-	-	71	0	0.00	34	4	10.53
CXCL14	0	genome.wustl.edu	37	5	134907552	134907552	+	Nonsense_Mutation	SNP	G	G	C			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	5	134907552	134907552	G	C	SNP	CXCL14	ENST00000337225	human	ensembl	74_37	-1	known	nonsense	c.327	p.Y109*	0.998	NULL	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom	-	no_errors	CXCL14	HGNC	ENSG00000145824	tier1	-	-	97	0	0.00	32	10	23.81
CCKAR	0	genome.wustl.edu	37	4	26483563	26483563	+	Silent	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	4	26483563	26483563	G	T	SNP	CCKAR	ENST00000295589	human	ensembl	74_37	-1	known	silent	c.984	p.P328	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Cholcskin_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_CholecystokininA_recpt_N,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Cholcy_rcpt_A,prints_Cholcskin_rcpt,prints_GPCR_Rhodpsn,prints_Gastrin_rcpt,prints_NPY_rcpt	-	no_errors	CCKAR	HGNC	ENSG00000163394	tier1	-	-	99	0	0.00	44	4	8.33
RPS13	0	genome.wustl.edu	37	11	17099248	17099248	+	RNA	SNP	C	C	G			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	11	17099248	17099248	C	G	SNP	RPS13	ENST00000526895	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RPS13	HGNC	ENSG00000110700	tier1	-	-	47	0	0.00	24	9	27.27
REXO1L1	0	genome.wustl.edu	37	8	86573758	86573758	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	8	86573758	86573758	G	A	SNP	REXO1L1	ENST00000379010	human	ensembl	74_37	-1	putative	missense	c.1969	p.R657C	0.000	smart_Exonuclease	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	REXO1L1	HGNC	ENSG00000205176	tier1	-	-	217	0	0.00	172	26	13.07
GPS2	0	genome.wustl.edu	37	17	7217236	7217236	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	17	7217236	7217236	G	T	SNP	GPS2	ENST00000380728	human	ensembl	74_37	-1	known	missense	c.469	p.Q157K	0.996	NULL	NULL	-	no_errors	GPS2	HGNC	ENSG00000132522	tier1	-	-	80	0	0.00	28	4	12.50
SCO1	0	genome.wustl.edu	37	17	10590121	10590121	+	Missense_Mutation	SNP	C	C	G			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	17	10590121	10590121	C	G	SNP	SCO1	ENST00000255390	human	ensembl	74_37	-1	known	missense	c.694	p.E232Q	0.616	pfam_SCO1/SenC,pfam_AhpC/TSA,superfamily_Thioredoxin-like_fold,pirsf_Synth_of_cyt-c-oxidase_Sco1/2	pfam_SCO1/SenC,pfam_AhpC/TSA,superfamily_Thioredoxin-like_fold,pirsf_Synth_of_cyt-c-oxidase_Sco1/2	-	no_errors	SCO1	HGNC	ENSG00000133028	tier1	-	-	72	0	0.00	95	9	8.65
SPAM1	0	genome.wustl.edu	37	7	123594537	123594537	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	7	123594537	123594537	C	T	SNP	SPAM1	ENST00000340011	human	ensembl	74_37	+1	known	missense	c.913	p.R305C	0.999	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase,prints_Hyaluronidase	-	no_errors	SPAM1	HGNC	ENSG00000106304	tier1	-	-	125	0	0.00	27	25	48.08
ATP8A2	0	genome.wustl.edu	37	13	26436460	26436460	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	13	26436460	26436460	G	A	SNP	ATP8A2	ENST00000381655	human	ensembl	74_37	+1	known	missense	c.3097	p.G1033R	1.000	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8A2	HGNC	ENSG00000132932	tier1	-	-	132	0	0.00	99	26	20.80
LRP2	0	genome.wustl.edu	37	2	170012824	170012824	+	Silent	SNP	C	C	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	2	170012824	170012824	C	A	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	silent	c.12111	p.T4037	0.070	superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479	tier1	-	-	189	0	0.00	91	17	15.74
SNHG16	0	genome.wustl.edu	37	17	74557433	74557433	+	RNA	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	17	74557433	74557433	G	A	SNP	SNHG16	ENST00000448136	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG16	HGNC	ENSG00000163597	tier1	-	-	72	0	0.00	66	20	23.26
HAVCR2	0	genome.wustl.edu	37	5	156533780	156533780	+	Silent	SNP	T	T	C			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	5	156533780	156533780	T	C	SNP	HAVCR2	ENST00000307851	human	ensembl	74_37	-1	known	silent	c.252	p.L84	0.671	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	HAVCR2	HGNC	ENSG00000135077	tier1	-	-	107	0	0.00	38	18	32.14
CHD5	0	genome.wustl.edu	37	1	6195407	6195407	+	Missense_Mutation	SNP	T	T	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	1	6195407	6195407	T	A	SNP	CHD5	ENST00000262450	human	ensembl	74_37	-1	known	missense	c.2753	p.K918M	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD5	HGNC	ENSG00000116254	tier1	-	-	60	0	0.00	49	19	27.94
SLC22A2	0	genome.wustl.edu	37	6	160679438	160679438	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	6	160679438	160679438	G	A	SNP	SLC22A2	ENST00000366953	human	ensembl	74_37	-1	known	missense	c.352	p.P118S	0.933	pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A2	HGNC	ENSG00000112499	tier1	-	-	130	0	0.00	92	23	20.00
TECTA	0	genome.wustl.edu	37	11	121061441	121061441	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	11	121061441	121061441	G	T	SNP	TECTA	ENST00000264037	human	ensembl	74_37	+1	known	missense	c.6394	p.V2132F	0.984	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_ZP_dom,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	TECTA	HGNC	ENSG00000109927	tier1	-	-	111	0	0.00	19	19	50.00
ENSG00000214581	0	genome.wustl.edu	37	16	34681870	34681870	+	RNA	SNP	A	A	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	16	34681870	34681870	A	T	SNP	ENSG00000214581	ENST00000568619	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.019	-	-	-	no_errors	RP11-80F22.10	Clone_based_vega_gene	ENSG00000214581	tier1	-	-	32	0	0.00	23	10	30.30
ENSG00000272667	0	genome.wustl.edu	37	2	128644476	128644476	+	RNA	SNP	A	A	C			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	2	128644476	128644476	A	C	SNP	ENSG00000272667	ENST00000609350	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-395A13.2	Clone_based_vega_gene	ENSG00000272667	tier1	-	-	139	0	0.00	102	19	15.70
DAPK1	0	genome.wustl.edu	37	9	90264842	90264842	+	Nonsense_Mutation	SNP	G	G	T			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	9	90264842	90264842	G	T	SNP	DAPK1	ENST00000469640	human	ensembl	74_37	+1	known	nonsense	c.1435	p.E479*	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Prot_kinase_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	DAPK1	HGNC	ENSG00000196730	tier1	-	-	101	0	0.00	55	5	8.33
AGR2	0	genome.wustl.edu	37	7	16834610	16834610	+	Missense_Mutation	SNP	C	C	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	7	16834610	16834610	C	A	SNP	AGR2	ENST00000419572	human	ensembl	74_37	-1	known	missense	c.488	p.G163V	1.000	superfamily_Thioredoxin-like_fold	superfamily_Thioredoxin-like_fold	-	no_errors	AGR2	HGNC	ENSG00000106541	tier1	-	-	99	0	0.00	45	12	21.05
MAGEB16	0	genome.wustl.edu	37	X	35820764	35820764	+	Missense_Mutation	SNP	T	T	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	X	35820764	35820764	T	A	SNP	MAGEB16	ENST00000399992	human	ensembl	74_37	+1	known	missense	c.547	p.F183I	0.001	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB16	HGNC	ENSG00000189023	tier1	-	-	38	0	0.00	4	7	63.64
SNHG16	0	genome.wustl.edu	37	17	74557370	74557370	+	RNA	SNP	G	G	C			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	17	74557370	74557370	G	C	SNP	SNHG16	ENST00000448136	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.022	-	-	-	no_errors	SNHG16	HGNC	ENSG00000163597	tier1	-	-	75	0	0.00	53	26	32.91
TRHDE	0	genome.wustl.edu	37	12	72866951	72866951	+	Silent	SNP	C	C	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	12	72866951	72866951	C	A	SNP	TRHDE	ENST00000261180	human	ensembl	74_37	+1	known	silent	c.1440	p.G480	1.000	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657	tier1	-	-	66	0	0.00	27	8	22.86
IGDCC4	0	genome.wustl.edu	37	15	65674432	65674432	+	RNA	SNP	T	T	A			TCGA-X6-A7W8-01A-21D-A351-09	TCGA-X6-A7W8-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0652dca-c89d-47f8-a18f-551c96c2c9ba	f1797d64-b9fe-40ab-bd49-793905d5c8d8	15	65674432	65674432	T	A	SNP	IGDCC4	ENST00000558048	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IGDCC4	HGNC	ENSG00000103742	tier1	-	-	82	0	0.00	45	5	10.00
