Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ACBD6	0	genome.wustl.edu	37	1	180471380	180471380	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	1	180471380	180471380	C	T	SNP	ACBD6	ENST00000367595	human	ensembl	74_37	-1	known	missense	c.22	p.A8T	0.002	NULL	pfam_Acyl-CoA-binding_protein,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Acyl-CoA-binding_protein,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Acyl-CoA-binding_protein,prints_Ankyrin_rpt	-	no_errors	ACBD6	HGNC	ENSG00000135847	tier1	-	-	42	0	0.00	24	4	14.29
PATL1	0	genome.wustl.edu	37	11	59419077	59419077	+	Silent	SNP	A	A	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	11	59419077	59419077	A	T	SNP	PATL1	ENST00000300146	human	ensembl	74_37	-1	known	silent	c.1464	p.S488	1.000	pfam_Topo_II-assoc_PAT1	pfam_Topo_II-assoc_PAT1	-	no_errors	PATL1	HGNC	ENSG00000166889	tier1	-	-	40	0	0.00	33	4	10.81
SLC52A2	0	genome.wustl.edu	37	8	145583332	145583332	+	Frame_Shift_Del	DEL	G	G	-			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	8	145583332	145583332	G	-	DEL	SLC52A2	ENST00000329994	human	ensembl	74_37	+1	known	frame_shift_del	c.180	p.G61fs	1.000	NULL	pfam_Endogenous_retrovirus_rcpt	-	no_errors	SLC52A2	HGNC	ENSG00000185803	tier1			57	0	0.00	54	10	15.62
LRRK2	0	genome.wustl.edu	37	12	40692941	40692941	+	Silent	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	12	40692941	40692941	G	A	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	silent	c.3378	p.L1126	0.879	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1	-	-	83	0	0.00	116	20	14.71
DMD	0	genome.wustl.edu	37	X	31200986	31200986	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	X	31200986	31200986	G	T	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.9843	p.F3281L	1.000	pfam_EF-hand_dom_typ2,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1	-	-	71	0	0.00	54	34	38.64
COLEC12	0	genome.wustl.edu	37	18	346619	346619	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	18	346619	346619	G	A	SNP	COLEC12	ENST00000400256	human	ensembl	74_37	-1	known	missense	c.1003	p.R335C	1.000	NULL	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	COLEC12	HGNC	ENSG00000158270	tier1	-	-	108	0	0.00	195	23	10.55
TUBB8P7	0	genome.wustl.edu	37	16	90161117	90161117	+	RNA	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	16	90161117	90161117	G	A	SNP	TUBB8P7	ENST00000563927	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.849	-	-	-	no_errors	TUBB8P7	HGNC	ENSG00000261812	tier1	-	-	135	0	0.00	77	26	25.24
COL4A5	0	genome.wustl.edu	37	X	107924118	107924118	+	Missense_Mutation	SNP	T	T	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	X	107924118	107924118	T	A	SNP	COL4A5	ENST00000328300	human	ensembl	74_37	+1	known	missense	c.4019	p.M1340K	0.999	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A5	HGNC	ENSG00000188153	tier1	-	-	156	0	0.00	108	55	33.74
NOL4	0	genome.wustl.edu	37	18	31538220	31538220	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	18	31538220	31538220	G	A	SNP	NOL4	ENST00000261592	human	ensembl	74_37	-1	known	missense	c.1219	p.R407W	1.000	NULL	NULL	-	no_errors	NOL4	HGNC	ENSG00000101746	tier1	-	-	49	0	0.00	44	4	8.33
METTL13	0	genome.wustl.edu	37	1	171753532	171753532	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	1	171753532	171753532	C	T	SNP	METTL13	ENST00000361735	human	ensembl	74_37	+1	known	missense	c.806	p.S269F	1.000	NULL	pfam_Methyltransf_11,pfam_Spermidine/spermine_synthase	-	no_errors	METTL13	HGNC	ENSG00000010165	tier1	-	-	51	0	0.00	34	10	22.73
CNOT1	0	genome.wustl.edu	37	16	58568140	58568140	+	Silent	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	16	58568140	58568140	G	A	SNP	CNOT1	ENST00000317147	human	ensembl	74_37	-1	known	silent	c.5806	p.L1936	1.000	NULL	pfam_CCR4-Not_Not1_C,superfamily_ARM-type_fold	-	no_errors	CNOT1	HGNC	ENSG00000125107	tier1	-	-	95	0	0.00	70	7	9.09
ENSG00000215346	0	genome.wustl.edu	37	8	10986462	10986462	+	Missense_Mutation	SNP	A	A	C			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	8	10986462	10986462	A	C	SNP	ENSG00000215346	ENST00000400102	human	ensembl	74_37	-1	novel	missense	c.92	p.L31R	0.036	NULL	NULL	-	no_errors	AF131215.5	Clone_based_ensembl_gene	ENSG00000215346	tier1	-	-	49	0	0.00	34	9	20.93
PHB2	0	genome.wustl.edu	37	12	7077684	7077684	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	12	7077684	7077684	G	A	SNP	PHB2	ENST00000399433	human	ensembl	74_37	-1	known	missense	c.367	p.R123C	1.000	pfam_Band_7,smart_Band_7	pfam_Band_7,smart_Band_7,prints_Prohibitin	-	no_errors	PHB2	HGNC	ENSG00000215021	tier1	-	-	61	0	0.00	75	16	17.58
CYP2E1	0	genome.wustl.edu	37	10	135345227	135345227	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	10	135345227	135345227	G	T	SNP	CYP2E1	ENST00000252945	human	ensembl	74_37	+1	known	missense	c.476	p.R159M	0.701	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2E-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2E1	HGNC	ENSG00000130649	tier1	-	-	42	0	0.00	38	4	9.52
BDH2	0	genome.wustl.edu	37	4	104003299	104003299	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	4	104003299	104003299	G	T	SNP	BDH2	ENST00000296424	human	ensembl	74_37	-1	known	missense	c.623	p.T208K	0.949	prints_Glc/ribitol_DH	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DHB_DH,prints_DH_sc/Rdtase_SDR,prints_ADH_insect	-	no_errors	BDH2	HGNC	ENSG00000164039	tier1	-	-	61	0	0.00	31	33	51.56
VAX1	0	genome.wustl.edu	37	10	118897354	118897354	+	Missense_Mutation	SNP	C	C	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	10	118897354	118897354	C	A	SNP	VAX1	ENST00000369206	human	ensembl	74_37	-1	known	missense	c.214	p.D72Y	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	VAX1	HGNC	ENSG00000148704	tier1	-	-	47	0	0.00	32	23	41.82
ADCY7	0	genome.wustl.edu	37	16	50342240	50342240	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	16	50342240	50342240	C	T	SNP	ADCY7	ENST00000254235	human	ensembl	74_37	+1	known	missense	c.1853	p.T618M	0.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY7	HGNC	ENSG00000121281	tier1	rs148155774	-	60	0	0.00	59	11	15.71
CLSTN3	0	genome.wustl.edu	37	12	7308935	7308936	+	RNA	DEL	TG	TG	-			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	12	7308935	7308936	TG	-	DEL	CLSTN3	ENST00000331148	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.062:0.004	-	-	-	no_errors	CLSTN3	HGNC	ENSG00000139182	tier1			42	0	0.00	32	3	8.57
ZNF534	0	genome.wustl.edu	37	19	52941698	52941698	+	Missense_Mutation	SNP	A	A	G			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	19	52941698	52941698	A	G	SNP	ZNF534	ENST00000332323	human	ensembl	74_37	+1	known	missense	c.1024	p.K342E	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF534	HGNC	ENSG00000198633	tier1	-	-	66	0	0.00	95	10	9.43
TMEM117	0	genome.wustl.edu	37	12	44783026	44783026	+	RNA	SNP	A	A	G			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	12	44783026	44783026	A	G	SNP	TMEM117	ENST00000546978	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.874	-	-	-	no_errors	TMEM117	HGNC	ENSG00000139173	tier1	-	-	35	0	0.00	31	14	31.11
ENSG00000177699	0	genome.wustl.edu	37	15	79277345	79277345	+	RNA	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	15	79277345	79277345	G	A	SNP	ENSG00000177699	ENST00000316148	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.073	-	-	-	no_errors	RP11-16K12.1	Clone_based_vega_gene	ENSG00000177699	tier1	rs202089658	-	44	0	0.00	44	11	20.00
FAM65C	0	genome.wustl.edu	37	20	49208924	49208924	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	20	49208924	49208924	G	T	SNP	FAM65C	ENST00000535356	human	ensembl	74_37	-1	known	missense	c.2534	p.A845D	0.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,superfamily_Chemokine_IL8-like_dom	-	no_errors	FAM65C	HGNC	ENSG00000042062	tier1	-	-	27	0	0.00	32	4	11.11
TENM3	0	genome.wustl.edu	37	4	183714357	183714357	+	Nonsense_Mutation	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	4	183714357	183714357	C	T	SNP	TENM3	ENST00000406950	human	ensembl	74_37	+1	known	nonsense	c.6532	p.R2178*	1.000	superfamily_Cyt_c-like_dom	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c-like_dom,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM3	HGNC	ENSG00000218336	tier1	-	-	52	0	0.00	45	4	8.16
RNFT2	0	genome.wustl.edu	37	12	117290182	117290183	+	RNA	INS	-	-	TTCCCC			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	12	117290182	117290183	-	TTCCCC	INS	RNFT2	ENST00000551251	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.014:0.009	-	-	-	no_errors	RNFT2	HGNC	ENSG00000135119	tier1			NA	NA	NA	NA	NA	NA
LRRK2	0	genome.wustl.edu	37	12	40692910	40692910	+	Splice_Site	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	12	40692910	40692910	G	A	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	splice_site	c.3348-1	e25-1	1.000	-	-	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1	-	-	70	0	0.00	88	15	14.56
WDR27	0	genome.wustl.edu	37	6	170070759	170070759	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	6	170070759	170070759	G	A	SNP	WDR27	ENST00000448612	human	ensembl	74_37	-1	known	missense	c.362	p.S121L	0.787	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR27	HGNC	ENSG00000184465	tier1	-	-	74	0	0.00	65	19	22.62
LRRC8C	0	genome.wustl.edu	37	1	90180397	90180397	+	Nonsense_Mutation	SNP	C	C	G			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	1	90180397	90180397	C	G	SNP	LRRC8C	ENST00000370454	human	ensembl	74_37	+1	known	nonsense	c.2268	p.Y756*	0.969	smart_Leu-rich_rpt_typical-subtyp	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8C	HGNC	ENSG00000171488	tier1	-	-	42	0	0.00	26	14	35.00
HEPHL1	0	genome.wustl.edu	37	11	93806290	93806290	+	Silent	SNP	A	A	G			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	11	93806290	93806290	A	G	SNP	HEPHL1	ENST00000315765	human	ensembl	74_37	+1	known	silent	c.1332	p.R444	0.120	superfamily_Cupredoxin	pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Cupredoxin	-	no_errors	HEPHL1	HGNC	ENSG00000181333	tier1	-	-	43	0	0.00	32	6	15.79
CYB561A3	0	genome.wustl.edu	37	11	61117028	61117028	+	RNA	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	11	61117028	61117028	G	T	SNP	CYB561A3	ENST00000540317	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.629	-	-	-	no_errors	CYB561A3	HGNC	ENSG00000162144	tier1	-	-	51	0	0.00	35	4	10.26
B3GALNT2	0	genome.wustl.edu	37	1	235643459	235643459	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	1	235643459	235643459	G	A	SNP	B3GALNT2	ENST00000366600	human	ensembl	74_37	-1	known	missense	c.562	p.L188F	1.000	NULL	pfam_Glyco_trans_31	-	no_errors	B3GALNT2	HGNC	ENSG00000162885	tier1	-	-	77	0	0.00	75	28	27.18
MYH1	0	genome.wustl.edu	37	17	10411236	10411236	+	Silent	SNP	A	A	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	17	10411236	10411236	A	T	SNP	MYH1	ENST00000226207	human	ensembl	74_37	-1	known	silent	c.1935	p.G645	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH1	HGNC	ENSG00000109061	tier1	-	-	147	0	0.00	237	37	13.45
CDC27	0	genome.wustl.edu	37	17	45234367	45234367	+	Missense_Mutation	SNP	A	A	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	17	45234367	45234367	A	T	SNP	CDC27	ENST00000531206	human	ensembl	74_37	-1	known	missense	c.754	p.S252T	1.000	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CDC27	HGNC	ENSG00000004897	tier1	rs200148949	-	118	1	0.84	129	15	10.42
LRRK2	0	genome.wustl.edu	37	12	40693045	40693045	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	12	40693045	40693045	G	A	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	missense	c.3482	p.R1161K	0.998	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1	-	-	117	0	0.00	119	19	13.77
ATN1	0	genome.wustl.edu	37	12	7045892	7045906	+	In_Frame_Del	DEL	CAGCAGCAGCAGCAG	CAGCAGCAGCAGCAG	-			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	CAGCAGCAGCAGCAG	CAGCAGCAGCAGCAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	12	7045892	7045906	CAGCAGCAGCAGCAG	-	DEL	ATN1	ENST00000356654	human	ensembl	74_37	+1	known	in_frame_del	c.1462_1476	p.QQQQQ491in_frame_del	0.834:0.709:0.730:0.772:0.719:0.700:0.962:0.955:0.948:0.969:0.915:0.004:0.157:0.124:0.121	pfam_Atrophin-like	pfam_Atrophin-like,prints_Atrophin-1	-	no_errors	ATN1	HGNC	ENSG00000111676	tier1			NA	NA	NA	NA	NA	NA
C14orf166B	0	genome.wustl.edu	37	14	77323797	77323797	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	14	77323797	77323797	G	T	SNP	C14orf166B	ENST00000393774	human	ensembl	74_37	+1	known	missense	c.1083	p.R361S	0.214	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	C14orf166B	HGNC	ENSG00000100565	tier1	-	-	38	0	0.00	38	4	9.52
AASDH	0	genome.wustl.edu	37	4	57244546	57244546	+	Missense_Mutation	SNP	A	A	G			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	4	57244546	57244546	A	G	SNP	AASDH	ENST00000205214	human	ensembl	74_37	-1	known	missense	c.436	p.W146R	0.462	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_Acyl_carrier_prot-like,superfamily_Quinonprotein_ADH-like_supfam,superfamily_Acyl_carrier_prot-like,smart_PQQ_beta_propeller_repeat,pfscan_Acyl_carrier_prot-like	-	no_errors	AASDH	HGNC	ENSG00000157426	tier1	-	-	39	0	0.00	21	3	12.50
KLHL22	0	genome.wustl.edu	37	22	20825717	20825717	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	22	20825717	20825717	G	T	SNP	KLHL22	ENST00000328879	human	ensembl	74_37	-1	known	missense	c.313	p.L105I	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BTB_POZ,pfam_Kelch_2,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL22	HGNC	ENSG00000099910	tier1	-	-	66	0	0.00	77	9	10.47
NTRK2	0	genome.wustl.edu	37	9	87342760	87342761	+	In_Frame_Ins	INS	-	-	ATA			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	9	87342760	87342761	-	ATA	INS	NTRK2	ENST00000277120	human	ensembl	74_37	+1	known	in_frame_ins	c.1045_1046	p.351in_frame_insN	1.000:1.000	pfam_Ig_I-set,prints_Tyr_kinase_NGF_rcpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_LRR-contain_N,superfamily_Kinase-like_dom,smart_LRR-contain_N,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_Tyr_kinase_NGF_rcpt,prints_Tyr_kin_neurotrophic_rcpt_2	-	no_errors	NTRK2	HGNC	ENSG00000148053	tier1			56	0	0.00	39	15	27.78
ST14	0	genome.wustl.edu	37	11	130059725	130059725	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	11	130059725	130059725	G	T	SNP	ST14	ENST00000278742	human	ensembl	74_37	+1	known	missense	c.532	p.V178L	0.000	pirsf_Peptidase_S1A_matripase,pfam_SEA_dom	pirsf_Peptidase_S1A_matripase,pfam_Peptidase_S1,pfam_LDrepeatLR_classA_rpt,pfam_CUB_dom,pfam_SEA_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1,prints_LDrepeatLR_classA_rpt,prints_Peptidase_S1A,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1	-	no_errors	ST14	HGNC	ENSG00000149418	tier1	-	-	67	0	0.00	41	4	8.89
SETD1B	0	genome.wustl.edu	37	12	122247688	122247688	+	Silent	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	12	122247688	122247688	G	A	SNP	SETD1B	ENST00000267197	human	ensembl	74_37	+1	known	silent	c.837	p.L279	1.000	NULL	pfam_COMPASS_Set1_N-SET,pfam_SET_dom,pfam_RRM_dom,smart_RRM_dom,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_RRM_dom	-	no_errors	SETD1B	HGNC	ENSG00000139718	tier1	-	-	151	0	0.00	139	30	17.65
UTP3	0	genome.wustl.edu	37	4	71554620	71554622	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	4	71554620	71554622	GAG	-	DEL	UTP3	ENST00000254803	human	ensembl	74_37	+1	known	in_frame_del	c.226_228	p.E79in_frame_del	0.044:0.001:0.001	NULL	pfam_Sas10_C_dom,pfam_Sas10/Utp3/C1D	-	no_errors	UTP3	HGNC	ENSG00000132467	tier1			34	0	0.00	27	4	12.90
CHD7	0	genome.wustl.edu	37	8	61654811	61654811	+	Missense_Mutation	SNP	A	A	G			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	8	61654811	61654811	A	G	SNP	CHD7	ENST00000423902	human	ensembl	74_37	+1	known	missense	c.820	p.R274G	1.000	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD7	HGNC	ENSG00000171316	tier1	-	-	33	0	0.00	85	10	10.53
ASTN2	0	genome.wustl.edu	37	9	119495717	119495717	+	Frame_Shift_Del	DEL	C	C	-			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	9	119495717	119495717	C	-	DEL	ASTN2	ENST00000313400	human	ensembl	74_37	-1	known	frame_shift_del	c.2482	p.V828fs	1.000	NULL	pfam_MACPF,superfamily_Fibronectin_type3,smart_MACPF	-	no_errors	ASTN2	HGNC	ENSG00000148219	tier1			46	0	0.00	58	9	13.43
ZNF479	0	genome.wustl.edu	37	7	57188073	57188073	+	Missense_Mutation	SNP	T	T	C			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	7	57188073	57188073	T	C	SNP	ZNF479	ENST00000331162	human	ensembl	74_37	-1	known	missense	c.1049	p.E350G	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF479	HGNC	ENSG00000185177	tier1	-	-	136	0	0.00	141	29	17.06
MAP3K15	0	genome.wustl.edu	37	X	19449651	19449651	+	Silent	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	X	19449651	19449651	G	T	SNP	MAP3K15	ENST00000338883	human	ensembl	74_37	-1	known	silent	c.1071	p.G357	0.686	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K15	HGNC	ENSG00000180815	tier1	-	-	68	0	0.00	40	4	9.09
ENSG00000260725	0	genome.wustl.edu	37	19	28910190	28910191	+	RNA	INS	-	-	TTTTT			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	19	28910190	28910191	-	TTTTT	INS	ENSG00000260725	ENST00000567877	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004:0.005	-	-	-	no_errors	AC005307.1	Clone_based_vega_gene	ENSG00000260725	tier1			NA	NA	NA	NA	NA	NA
TGM7	0	genome.wustl.edu	37	15	43568678	43568678	+	Missense_Mutation	SNP	A	A	G			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	15	43568678	43568678	A	G	SNP	TGM7	ENST00000452443	human	ensembl	74_37	-1	known	missense	c.2108	p.F703S	0.139	pfam_Transglutaminase_C,superfamily_Transglutaminase_C	pfam_Transglutaminase_N,pfam_Transglutaminase_C,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM7	HGNC	ENSG00000159495	tier1	-	-	61	0	0.00	64	40	38.46
GPR98	0	genome.wustl.edu	37	5	90050957	90050957	+	Missense_Mutation	SNP	G	G	C			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	5	90050957	90050957	G	C	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.11535	p.M3845I	1.000	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	tier1	-	-	40	0	0.00	23	4	14.81
ENTPD1	0	genome.wustl.edu	37	10	97607265	97607265	+	Missense_Mutation	SNP	C	C	G			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	10	97607265	97607265	C	G	SNP	ENTPD1	ENST00000371207	human	ensembl	74_37	+1	known	missense	c.912	p.N304K	0.000	pfam_GDA1_CD39_NTPase	pfam_GDA1_CD39_NTPase	-	no_errors	ENTPD1	HGNC	ENSG00000138185	tier1	-	-	80	0	0.00	57	21	26.92
SLC12A3	0	genome.wustl.edu	37	16	56914083	56914083	+	Silent	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	16	56914083	56914083	C	T	SNP	SLC12A3	ENST00000438926	human	ensembl	74_37	+1	known	silent	c.1485	p.F495	0.994	pfam_AA-permease/SLC12A_dom,prints_NaCl_cotranspt,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_AA_permease_N,prints_NaCl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A3	HGNC	ENSG00000070915	tier1	-	-	238	0	0.00	135	98	42.06
ZNF268	0	genome.wustl.edu	37	12	133780214	133780214	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	12	133780214	133780214	G	A	SNP	ZNF268	ENST00000228289	human	ensembl	74_37	+1	known	missense	c.1942	p.A648T	0.001	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF268	HGNC	ENSG00000090612	tier1	-	-	62	0	0.00	34	5	12.82
CHDH	0	genome.wustl.edu	37	3	53857739	53857739	+	Silent	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	3	53857739	53857739	G	A	SNP	CHDH	ENST00000315251	human	ensembl	74_37	-1	known	silent	c.297	p.C99	0.710	pfam_GMC_OxRdtase_N,pirsf_GMC_OxRdtase	pfam_GMC_OxRdtase_N,pfam_GMC_OxRtase_C,pirsf_GMC_OxRdtase	-	no_errors	CHDH	HGNC	ENSG00000016391	tier1	-	-	62	0	0.00	30	11	26.83
ZDHHC11B	0	genome.wustl.edu	37	5	710820	710821	+	RNA	DEL	GA	GA	-			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	5	710820	710821	GA	-	DEL	ZDHHC11B	ENST00000522356	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.786:0.478	-	-	-	no_errors	ZDHHC11B	HGNC	ENSG00000206077	tier1			52	0	0.00	14	3	17.65
C14orf37	0	genome.wustl.edu	37	14	58582973	58582973	+	RNA	SNP	T	T	C			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	14	58582973	58582973	T	C	SNP	C14orf37	ENST00000334342	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	C14orf37	HGNC	ENSG00000139971	tier1	-	-	51	0	0.00	42	4	8.70
C10orf68	0	genome.wustl.edu	37	10	33165274	33165274	+	Splice_Site	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	10	33165274	33165274	G	T	SNP	C10orf68	ENST00000375025	human	ensembl	74_37	+1	known	splice_site	c.2033-1	e22-1	0.040	-	-	-	no_errors	C10orf68	HGNC	ENSG00000150076	tier1	-	-	99	0	0.00	27	20	42.55
CTIF	0	genome.wustl.edu	37	18	46163008	46163008	+	Silent	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	18	46163008	46163008	G	A	SNP	CTIF	ENST00000382998	human	ensembl	74_37	+1	known	silent	c.204	p.P68	0.918	NULL	pfam_MIF4G-like_typ-3,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	-	no_errors	CTIF	HGNC	ENSG00000134030	tier1	-	-	85	0	0.00	57	20	25.64
LRRK2	0	genome.wustl.edu	37	12	40693049	40693049	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	12	40693049	40693049	G	A	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	missense	c.3486	p.M1162I	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1	-	-	110	0	0.00	116	19	14.07
C8B	0	genome.wustl.edu	37	1	57425757	57425757	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	1	57425757	57425757	G	A	SNP	C8B	ENST00000371237	human	ensembl	74_37	-1	known	missense	c.185	p.P62L	0.983	superfamily_Thrombospondin_1_rpt	pfam_MACPF,pfam_LDrepeatLR_classA_rpt,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,pfscan_LDrepeatLR_classA_rpt,pfscan_Thrombospondin_1_rpt,prints_MAC_perforin	-	no_errors	C8B	HGNC	ENSG00000021852	tier1	rs151070962	-	65	0	0.00	46	21	30.88
SLC12A4	0	genome.wustl.edu	37	16	67981265	67981265	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	16	67981265	67981265	C	T	SNP	SLC12A4	ENST00000422611	human	ensembl	74_37	-1	known	missense	c.2047	p.E683K	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_K/Cl_cotranspt_1/3,prints_KCL_cotranspt,prints_K/Cl_cotranspt1,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A4	HGNC	ENSG00000124067	tier1	-	-	12	0	0.00	9	4	30.77
HOPX	0	genome.wustl.edu	37	4	57514964	57514964	+	Splice_Site	SNP	C	C	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	4	57514964	57514964	C	A	SNP	HOPX	ENST00000554144	human	ensembl	74_37	-1	known	splice_site	c.329-1	e4-1	1.000	-	-	-	no_errors	HOPX	HGNC	ENSG00000171476	tier1	-	-	35	0	0.00	35	4	10.26
OR5L1	0	genome.wustl.edu	37	11	55579721	55579721	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	11	55579721	55579721	G	A	SNP	OR5L1	ENST00000333973	human	ensembl	74_37	+1	known	missense	c.779	p.C260Y	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5L1	HGNC	ENSG00000186117	tier1	-	-	48	0	0.00	27	3	10.00
LAMC3	0	genome.wustl.edu	37	9	133967312	133967313	+	RNA	INS	-	-	CC			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	9	133967312	133967313	-	CC	INS	LAMC3	ENST00000462567	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	LAMC3	HGNC	ENSG00000050555	tier1			26	0	0.00	26	4	13.33
CLDN2	0	genome.wustl.edu	37	X	106171471	106171471	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	X	106171471	106171471	G	A	SNP	CLDN2	ENST00000336803	human	ensembl	74_37	+1	known	missense	c.13	p.G5S	1.000	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin2,prints_Claudin,prints_Claudin14	-	no_errors	CLDN2	HGNC	ENSG00000165376	tier1	-	-	60	0	0.00	42	15	26.32
CNTNAP5	0	genome.wustl.edu	37	2	124999855	124999855	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	2	124999855	124999855	C	T	SNP	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	missense	c.266	p.T89I	0.997	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052	tier1	-	-	97	0	0.00	59	61	50.41
AMZ2	0	genome.wustl.edu	37	17	66247426	66247427	+	RNA	INS	-	-	CTGTATAG			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	17	66247426	66247427	-	CTGTATAG	INS	AMZ2	ENST00000581779	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.003	-	-	-	no_errors	AMZ2	HGNC	ENSG00000196704	tier1			NA	NA	NA	NA	NA	NA
SLC25A48	0	genome.wustl.edu	37	5	135188287	135188287	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	5	135188287	135188287	C	T	SNP	SLC25A48	ENST00000462340	human	ensembl	74_37	+1	known	missense	c.157	p.R53C	0.582	NULL	NULL	-	no_errors	SLC25A48	HGNC	ENSG00000145832	tier1	-	-	39	0	0.00	32	10	23.81
SIPA1L3	0	genome.wustl.edu	37	19	38633272	38633272	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	19	38633272	38633272	C	T	SNP	SIPA1L3	ENST00000222345	human	ensembl	74_37	+1	known	missense	c.3455	p.P1152L	1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L3	HGNC	ENSG00000105738	tier1	-	-	88	0	0.00	114	83	42.13
RCVRN	0	genome.wustl.edu	37	17	9801318	9801318	+	RNA	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	17	9801318	9801318	C	T	SNP	RCVRN	ENST00000570909	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	RCVRN	HGNC	ENSG00000109047	tier1	-	-	33	0	0.00	26	9	25.71
C17orf74	0	genome.wustl.edu	37	17	7330144	7330144	+	Silent	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	17	7330144	7330144	G	A	SNP	C17orf74	ENST00000333870	human	ensembl	74_37	+1	known	silent	c.834	p.S278	0.000	NULL	NULL	-	no_errors	C17orf74	HGNC	ENSG00000184560	tier1	-	-	93	0	0.00	87	20	18.69
IGSF3	0	genome.wustl.edu	37	1	117146496	117146496	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	1	117146496	117146496	G	T	SNP	IGSF3	ENST00000318837	human	ensembl	74_37	-1	known	missense	c.1434	p.S478R	1.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF3	HGNC	ENSG00000143061	tier1	-	-	82	0	0.00	65	21	24.42
MAST1	0	genome.wustl.edu	37	19	12975906	12975906	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	19	12975906	12975906	C	T	SNP	MAST1	ENST00000251472	human	ensembl	74_37	+1	known	missense	c.1552	p.L518F	0.997	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST1	HGNC	ENSG00000105613	tier1	-	-	29	0	0.00	42	8	16.00
ADAMTS14	0	genome.wustl.edu	37	10	72520516	72520516	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	10	72520516	72520516	G	T	SNP	ADAMTS14	ENST00000373208	human	ensembl	74_37	+1	known	missense	c.3588	p.Q1196H	0.001	NULL	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS14	HGNC	ENSG00000138316	tier1	-	-	37	0	0.00	44	4	8.33
LCMT2	0	genome.wustl.edu	37	15	43622562	43622562	+	Silent	SNP	A	A	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	15	43622562	43622562	A	T	SNP	LCMT2	ENST00000305641	human	ensembl	74_37	-1	known	silent	c.126	p.V42	0.003	pfam_LCM_MeTrfase	pfam_LCM_MeTrfase	-	no_errors	LCMT2	HGNC	ENSG00000168806	tier1	-	-	39	0	0.00	33	8	19.05
ENSG00000166104	0	genome.wustl.edu	37	15	62538270	62538270	+	RNA	SNP	T	T	C			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	15	62538270	62538270	T	C	SNP	ENSG00000166104	ENST00000570077	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	hsa-mir-7162	miRBase	ENSG00000166104	tier1	-	-	69	0	0.00	73	8	9.88
THBS1	0	genome.wustl.edu	37	15	39882082	39882082	+	Missense_Mutation	SNP	A	A	C			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	15	39882082	39882082	A	C	SNP	THBS1	ENST00000260356	human	ensembl	74_37	+1	known	missense	c.2003	p.H668P	1.000	smart_EG-like_dom,pfscan_EG-like_dom	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS1	HGNC	ENSG00000137801	tier1	-	-	80	0	0.00	65	27	29.35
PSMB9	0	genome.wustl.edu	37	6	32823978	32823978	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	6	32823978	32823978	G	T	SNP	PSMB9	ENST00000374859	human	ensembl	74_37	+1	known	missense	c.124	p.A42S	1.000	pfam_Proteasome_sua/b,prints_Pept_T1A_subB	pfam_Proteasome_sua/b,prints_Pept_T1A_subB	-	no_errors	PSMB9	HGNC	ENSG00000240065	tier1	-	-	127	0	0.00	99	18	15.38
TMEM132B	0	genome.wustl.edu	37	12	126139120	126139120	+	Missense_Mutation	SNP	C	C	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	12	126139120	126139120	C	A	SNP	TMEM132B	ENST00000299308	human	ensembl	74_37	+1	known	missense	c.3101	p.P1034Q	1.000	NULL	NULL	-	no_errors	TMEM132B	HGNC	ENSG00000139364	tier1	-	-	49	0	0.00	51	12	19.05
ASPDH	0	genome.wustl.edu	37	19	51017820	51017820	+	RNA	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	19	51017820	51017820	C	T	SNP	ASPDH	ENST00000597030	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ASPDH	HGNC	ENSG00000204653	tier1	-	-	20	0	0.00	29	7	19.44
BRAP	0	genome.wustl.edu	37	12	112110525	112110525	+	Silent	SNP	T	T	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	12	112110525	112110525	T	A	SNP	BRAP	ENST00000419234	human	ensembl	74_37	-1	known	silent	c.687	p.I229	0.993	pfam_BRAP2	pfam_BRAP2,pfam_Znf_UBP,pfam_Znf_C3HC4_RING-type,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_UBP,pfscan_Znf_RING,pfscan_Znf_UBP	-	no_errors	BRAP	HGNC	ENSG00000089234	tier1	-	-	64	0	0.00	51	13	20.31
SGCG	0	genome.wustl.edu	37	13	23853610	23853610	+	Silent	SNP	A	A	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	13	23853610	23853610	A	T	SNP	SGCG	ENST00000218867	human	ensembl	74_37	+1	known	silent	c.498	p.R166	0.998	pfam_Sarcoglycan	pfam_Sarcoglycan	-	no_errors	SGCG	HGNC	ENSG00000102683	tier1	-	-	62	0	0.00	50	9	15.25
CACNA1C	0	genome.wustl.edu	37	12	2602406	2602406	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	12	2602406	2602406	G	A	SNP	CACNA1C	ENST00000399634	human	ensembl	74_37	+1	known	missense	c.967	p.G323R	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCC_L_a1csu,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1C	HGNC	ENSG00000151067	tier1	-	-	55	0	0.00	63	11	14.86
ENKUR	0	genome.wustl.edu	37	10	25284683	25284683	+	Silent	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	10	25284683	25284683	G	T	SNP	ENKUR	ENST00000331161	human	ensembl	74_37	-1	known	silent	c.339	p.I113	1.000	NULL	NULL	-	no_errors	ENKUR	HGNC	ENSG00000151023	tier1	-	-	54	0	0.00	38	4	9.52
MKI67	0	genome.wustl.edu	37	10	129907069	129907069	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	10	129907069	129907069	G	T	SNP	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	missense	c.3035	p.P1012Q	0.000	pfam_K167R	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773	tier1	-	-	30	0	0.00	17	5	22.73
LRRC16A	0	genome.wustl.edu	37	6	25279425	25279447	+	RNA	DEL	CGGAGGCCGGCCTCGCACCGGTG	CGGAGGCCGGCCTCGCACCGGTG	-			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	CGGAGGCCGGCCTCGCACCGGTG	CGGAGGCCGGCCTCGCACCGGTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	6	25279425	25279447	CGGAGGCCGGCCTCGCACCGGTG	-	DEL	LRRC16A	ENST00000461945	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.067:0.543:0.412:0.391:0.373:0.090:0.001:0.000:0.000:0.001:0.001:0.000:0.001:0.002:0.001:0.001:0.000:0.000:0.000:0.001:0.000:0.021	-	-	-	no_errors	LRRC16A	HGNC	ENSG00000079691	tier1			NA	NA	NA	NA	NA	NA
NLRP2	0	genome.wustl.edu	37	19	55494429	55494429	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	19	55494429	55494429	G	A	SNP	NLRP2	ENST00000448584	human	ensembl	74_37	+1	known	missense	c.1363	p.A455T	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP2	HGNC	ENSG00000022556	tier1	rs200762489	-	35	0	0.00	40	10	20.00
MAP3K5	0	genome.wustl.edu	37	6	136934374	136934374	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	6	136934374	136934374	G	A	SNP	MAP3K5	ENST00000359015	human	ensembl	74_37	-1	known	missense	c.2299	p.R767C	0.997	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP3K5	HGNC	ENSG00000197442	tier1	-	-	99	0	0.00	100	11	9.91
DFNA5	0	genome.wustl.edu	37	7	24784186	24784186	+	Silent	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	7	24784186	24784186	G	A	SNP	DFNA5	ENST00000342947	human	ensembl	74_37	-1	known	silent	c.399	p.A133	0.000	pfam_Gasdermin	pfam_Gasdermin	-	no_errors	DFNA5	HGNC	ENSG00000105928	tier1	-	-	58	0	0.00	46	32	41.03
MTUS2	0	genome.wustl.edu	37	13	29599892	29599892	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	13	29599892	29599892	C	T	SNP	MTUS2	ENST00000431530	human	ensembl	74_37	+1	known	missense	c.1087	p.H363Y	0.000	NULL	NULL	-	no_errors	MTUS2	HGNC	ENSG00000132938	tier1	-	-	33	0	0.00	10	3	23.08
RBFOX1	0	genome.wustl.edu	37	16	7637263	7637263	+	Silent	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	16	7637263	7637263	C	T	SNP	RBFOX1	ENST00000547372	human	ensembl	74_37	+1	known	silent	c.558	p.I186	1.000	pfam_RRM_dom,smart_RRM_dom,pirsf_RNA-bd_Fox-1,pfscan_RRM_dom	pfam_Fox-1_C_dom,pfam_RRM_dom,smart_RRM_dom,pirsf_RNA-bd_Fox-1,pfscan_RRM_dom	-	no_errors	RBFOX1	HGNC	ENSG00000078328	tier1	-	-	128	0	0.00	122	26	17.57
SPTBN2	0	genome.wustl.edu	37	11	66460047	66460047	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	11	66460047	66460047	G	A	SNP	SPTBN2	ENST00000309996	human	ensembl	74_37	-1	known	missense	c.5150	p.A1717V	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN2	HGNC	ENSG00000173898	tier1	-	-	24	0	0.00	12	21	61.76
ALPK1	0	genome.wustl.edu	37	4	113303659	113303659	+	Missense_Mutation	SNP	A	A	G			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	4	113303659	113303659	A	G	SNP	ALPK1	ENST00000177648	human	ensembl	74_37	+1	known	missense	c.227	p.D76G	1.000	NULL	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	ALPK1	HGNC	ENSG00000073331	tier1	-	-	109	0	0.00	108	15	12.20
EML4	0	genome.wustl.edu	37	2	42522363	42522363	+	Silent	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	2	42522363	42522363	C	T	SNP	EML4	ENST00000318522	human	ensembl	74_37	+1	known	silent	c.1317	p.S439	1.000	superfamily_Quinonprotein_ADH-like_supfam	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML4	HGNC	ENSG00000143924	tier1	rs201724206	GMAF=0.0005	95	0	0.00	45	22	32.35
LINC00303	0	genome.wustl.edu	37	1	204002163	204002163	+	RNA	SNP	A	A	G			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	1	204002163	204002163	A	G	SNP	LINC00303	ENST00000367207	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00303	HGNC	ENSG00000176754	tier1	-	-	50	0	0.00	46	4	8.00
AFAP1L2	0	genome.wustl.edu	37	10	116093020	116093020	+	Silent	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	10	116093020	116093020	C	T	SNP	AFAP1L2	ENST00000545353	human	ensembl	74_37	-1	known	silent	c.180	p.V60	0.972	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	AFAP1L2	HGNC	ENSG00000169129	tier1	-	-	48	0	0.00	22	4	15.38
MUC5B	0	genome.wustl.edu	37	11	1266479	1266479	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	11	1266479	1266479	G	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.8378	p.G2793V	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	rs202133597	-	33	0	0.00	51	8	13.56
COL4A3BP	0	genome.wustl.edu	37	5	74696029	74696029	+	Splice_Site	SNP	C	C	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	5	74696029	74696029	C	A	SNP	COL4A3BP	ENST00000380494	human	ensembl	74_37	-1	known	splice_site	c.1494+1	e11+1	1.000	-	-	-	no_errors	COL4A3BP	HGNC	ENSG00000113163	tier1	-	-	139	0	0.00	71	10	12.20
SAMD9	0	genome.wustl.edu	37	7	92731597	92731598	+	Frame_Shift_Ins	INS	-	-	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	7	92731597	92731598	-	A	INS	SAMD9	ENST00000379958	human	ensembl	74_37	-1	known	frame_shift_ins	c.3814_3813	p.D1271fs	1.000:1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_SAM,pfscan_SAM	-	no_errors	SAMD9	HGNC	ENSG00000205413	tier1			82	0	0.00	68	16	19.05
LY6G6C	0	genome.wustl.edu	37	6	31686906	31686906	+	Silent	SNP	G	G	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	6	31686906	31686906	G	T	SNP	LY6G6C	ENST00000375819	human	ensembl	74_37	-1	known	silent	c.345	p.S115	0.931	NULL	NULL	-	no_errors	LY6G6C	HGNC	ENSG00000204421	tier1	-	-	33	0	0.00	32	4	11.11
C6orf132	0	genome.wustl.edu	37	6	42074123	42074123	+	Silent	SNP	C	C	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	6	42074123	42074123	C	A	SNP	C6orf132	ENST00000341865	human	ensembl	74_37	-1	putative	silent	c.1527	p.L509	0.000	NULL	NULL	-	no_errors	C6orf132	HGNC	ENSG00000188112	tier1	-	-	12	0	0.00	13	6	31.58
FAM230A	0	genome.wustl.edu	37	22	20710005	20710005	+	Silent	SNP	C	C	A			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	22	20710005	20710005	C	A	SNP	FAM230A	ENST00000434783	human	ensembl	74_37	+1	known	silent	c.1737	p.P579	0.114	superfamily_Kinase-like_dom	pfam_Ret-finger_pr-like_3_antisense,superfamily_Kinase-like_dom	-	no_errors	FAM230A	HGNC	ENSG00000188280	tier1	-	-	47	0	0.00	45	12	21.05
ENSG00000272231	0	genome.wustl.edu	37	12	74293700	74293709	+	RNA	DEL	ACACACACAC	ACACACACAC	-			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	ACACACACAC	ACACACACAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	12	74293700	74293709	ACACACACAC	-	DEL	ENSG00000272231	ENST00000606199	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.011:0.011:0.017:0.021:0.026:0.029:0.033:0.036:0.039:0.041	-	-	-	no_errors	AC136188.1	Clone_based_ensembl_gene	ENSG00000272231	tier1			NA	NA	NA	NA	NA	NA
PTPRF	0	genome.wustl.edu	37	1	44054430	44054430	+	Silent	SNP	C	C	T			TCGA-X6-A8C3-01A-11D-A36J-09	TCGA-X6-A8C3-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0106ac31-330d-4d39-b9d4-3d3e84e20d39	f855dc78-d931-4312-8cb7-5f7187895b37	1	44054430	44054430	C	T	SNP	PTPRF	ENST00000359947	human	ensembl	74_37	+1	known	silent	c.708	p.I236	1.000	pfam_Ig_I-set,pfscan_Ig-like_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRF	HGNC	ENSG00000142949	tier1	-	-	21	0	0.00	20	6	23.08
