Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
KIAA1211	0	genome.wustl.edu	37	4	57180907	57180907	+	Silent	SNP	G	G	A			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	4	57180907	57180907	G	A	SNP	KIAA1211	ENST00000504228	human	ensembl	74_37	+1	known	silent	c.1239	p.E413	0.000	NULL	NULL	-	no_errors	KIAA1211	HGNC	ENSG00000109265	tier1	-	-	131	0	0.00	31	66	68.04
DUSP1	0	genome.wustl.edu	37	5	172195849	172195849	+	Missense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	5	172195849	172195849	G	T	SNP	DUSP1	ENST00000239223	human	ensembl	74_37	-1	known	missense	c.1020	p.N340K	1.000	pirsf_MKP	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP,prints_Atypical_DUSP	-	no_errors	DUSP1	HGNC	ENSG00000120129	tier1	-	-	66	0	0.00	32	4	11.11
SPRED3	0	genome.wustl.edu	37	19	38882864	38882866	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	19	38882864	38882866	CCT	-	DEL	SPRED3	ENST00000338502	human	ensembl	74_37	+1	known	in_frame_del	c.359_361	p.S124in_frame_del	1.000:0.995:0.997	NULL	pfam_Sprouty,pfam_WH1/EVH1,smart_WH1/EVH1,pfscan_WH1/EVH1	-	no_errors	SPRED3	HGNC	ENSG00000188766	tier1			36	0	0.00	56	6	9.68
PKD1L1	0	genome.wustl.edu	37	7	47945469	47945469	+	Missense_Mutation	SNP	T	T	C			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	7	47945469	47945469	T	C	SNP	PKD1L1	ENST00000289672	human	ensembl	74_37	-1	known	missense	c.1493	p.H498R	0.000	NULL	pfam_PKD/REJ-like,pfam_PKD1_2_channel,pfam_PKD_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,superfamily_PKD_dom,smart_PKD/Chitinase_dom,smart_PLAT/LH2_dom,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like	-	no_errors	PKD1L1	HGNC	ENSG00000158683	tier1	rs200709779	GMAF=0	60	0	0.00	97	57	37.01
DNAH10	0	genome.wustl.edu	37	12	124358165	124358165	+	Missense_Mutation	SNP	G	G	C			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	12	124358165	124358165	G	C	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	missense	c.7492	p.E2498Q	1.000	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653	tier1	-	-	92	0	0.00	41	28	40.58
KRBA1	0	genome.wustl.edu	37	7	149430495	149430495	+	Missense_Mutation	SNP	G	G	C			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	7	149430495	149430495	G	C	SNP	KRBA1	ENST00000255992	human	ensembl	74_37	+1	known	missense	c.2449	p.A817P	0.000	NULL	NULL	-	no_errors	KRBA1	HGNC	ENSG00000133619	tier1	-	-	61	0	0.00	37	21	35.59
CR1	0	genome.wustl.edu	37	1	207753676	207753676	+	Silent	SNP	T	T	C			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	1	207753676	207753676	T	C	SNP	CR1	ENST00000367049	human	ensembl	74_37	+1	known	silent	c.5028	p.C1676	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1	HGNC	ENSG00000203710	tier1	-	-	142	0	0.00	34	40	54.05
SYT16	0	genome.wustl.edu	37	14	62567269	62567269	+	Silent	SNP	C	C	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	14	62567269	62567269	C	T	SNP	SYT16	ENST00000430451	human	ensembl	74_37	+1	novel	silent	c.1782	p.S594	0.929	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYT16	HGNC	ENSG00000139973	tier1	-	-	79	0	0.00	15	34	69.39
GPRC6A	0	genome.wustl.edu	37	6	117127901	117127901	+	Missense_Mutation	SNP	C	C	A			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	6	117127901	117127901	C	A	SNP	GPRC6A	ENST00000310357	human	ensembl	74_37	-1	known	missense	c.967	p.V323F	0.995	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_GPCR_3_C,pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_vmron_rcpt_2	-	no_errors	GPRC6A	HGNC	ENSG00000173612	tier1	-	-	35	0	0.00	19	16	45.71
NLRC3	0	genome.wustl.edu	37	16	3613566	3613566	+	Missense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	16	3613566	3613566	G	T	SNP	NLRC3	ENST00000448023	human	ensembl	74_37	-1	known	missense	c.1513	p.L505M	0.966	NULL	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase	-	no_errors	NLRC3	HGNC	ENSG00000167984	tier1	-	-	41	0	0.00	40	4	9.09
ENSG00000264299	0	genome.wustl.edu	37	11	125828460	125828461	+	RNA	INS	-	-	TATATGTG			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	11	125828460	125828461	-	TATATGTG	INS	ENSG00000264299	ENST00000582823	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.301:0.221	-	-	-	no_errors	RP11-680F20.12	Clone_based_vega_gene	ENSG00000264299	tier1			NA	NA	NA	NA	NA	NA
MAGEC1	0	genome.wustl.edu	37	X	140996475	140996475	+	Silent	SNP	C	C	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	X	140996475	140996475	C	T	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	silent	c.3285	p.V1095	0.000	pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495	tier1	-	-	34	0	0.00	27	9	25.00
CTRB1	0	genome.wustl.edu	37	16	75257097	75257097	+	Nonsense_Mutation	SNP	C	C	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	16	75257097	75257097	C	T	SNP	CTRB1	ENST00000361017	human	ensembl	74_37	+1	known	nonsense	c.295	p.Q99*	0.997	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CTRB1	HGNC	ENSG00000168925	tier1	-	-	111	0	0.00	31	22	41.51
CHAF1B	0	genome.wustl.edu	37	21	37771863	37771863	+	Missense_Mutation	SNP	A	A	G			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	21	37771863	37771863	A	G	SNP	CHAF1B	ENST00000314103	human	ensembl	74_37	+1	known	missense	c.623	p.N208S	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Gprotein_B	-	no_errors	CHAF1B	HGNC	ENSG00000159259	tier1	-	-	46	0	0.00	43	4	8.51
MYH14	0	genome.wustl.edu	37	19	50760604	50760604	+	Missense_Mutation	SNP	C	C	A			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	19	50760604	50760604	C	A	SNP	MYH14	ENST00000262269	human	ensembl	74_37	+1	known	missense	c.2093	p.P698Q	0.098	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH14	HGNC	ENSG00000105357	tier1	-	-	50	0	0.00	17	15	46.88
TRIM27	0	genome.wustl.edu	37	6	28888004	28888004	+	Missense_Mutation	SNP	C	C	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	6	28888004	28888004	C	T	SNP	TRIM27	ENST00000377199	human	ensembl	74_37	-1	known	missense	c.532	p.E178K	1.000	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin,prints_Znf_B-box_chordata	-	no_errors	TRIM27	HGNC	ENSG00000204713	tier1	-	-	35	0	0.00	20	7	25.93
USP4	0	genome.wustl.edu	37	3	49362341	49362341	+	Missense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	3	49362341	49362341	G	T	SNP	USP4	ENST00000265560	human	ensembl	74_37	-1	known	missense	c.619	p.L207I	0.943	NULL	pfam_Peptidase_C19/C67,pfam_Pept_C19_DUSP,smart_Pept_C19_DUSP,pfscan_Peptidase_C19/C67	-	no_errors	USP4	HGNC	ENSG00000114316	tier1	-	-	76	0	0.00	32	5	13.51
SLC35F5	0	genome.wustl.edu	37	2	114500276	114500277	+	Frame_Shift_Ins	INS	-	-	A			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	2	114500276	114500277	-	A	INS	SLC35F5	ENST00000245680	human	ensembl	74_37	-1	known	frame_shift_ins	c.743_742	p.C248fs	1.000:1.000	pfam_DMT	pfam_DMT	-	no_errors	SLC35F5	HGNC	ENSG00000115084	tier1			64	0	0.00	30	4	11.76
ENSG00000266657	0	genome.wustl.edu	37	1	142653541	142653541	+	RNA	SNP	T	T	C			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	1	142653541	142653541	T	C	SNP	ENSG00000266657	ENST00000580249	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AL583842.3	Clone_based_ensembl_gene	ENSG00000266657	tier1	-	-	143	0	0.00	79	31	27.93
FGFR4	0	genome.wustl.edu	37	5	176524620	176524620	+	Silent	SNP	C	C	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	5	176524620	176524620	C	T	SNP	FGFR4	ENST00000292408	human	ensembl	74_37	+1	known	silent	c.2352	p.H784	0.977	pirsf_FGF_rcpt_fam	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FGFR4	HGNC	ENSG00000160867	tier1	rs199622668	GMAF=0.0005	44	0	0.00	11	17	60.71
OR8K3	0	genome.wustl.edu	37	11	56086342	56086342	+	Missense_Mutation	SNP	T	T	G			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	11	56086342	56086342	T	G	SNP	OR8K3	ENST00000312711	human	ensembl	74_37	+1	known	missense	c.560	p.L187W	0.012	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8K3	HGNC	ENSG00000181689	tier1	-	-	70	0	0.00	19	20	51.28
ENSG00000221684	0	genome.wustl.edu	37	X	70979276	70979276	+	RNA	SNP	A	A	G			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	X	70979276	70979276	A	G	SNP	ENSG00000221684	ENST00000408757	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	BX276092.1	Clone_based_ensembl_gene	ENSG00000221684	tier1	rs67643106	-	41	0	0.00	30	4	11.76
ELAVL4	0	genome.wustl.edu	37	1	50663196	50663197	+	RNA	INS	-	-	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	1	50663196	50663197	-	T	INS	ELAVL4	ENST00000474675	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	ELAVL4	HGNC	ENSG00000162374	tier1			21	0	0.00	18	3	14.29
INSC	0	genome.wustl.edu	37	11	15243108	15243108	+	Missense_Mutation	SNP	C	C	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	11	15243108	15243108	C	T	SNP	INSC	ENST00000379554	human	ensembl	74_37	+1	known	missense	c.1046	p.A349V	1.000	superfamily_ARM-type_fold,smart_Armadillo	superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	INSC	HGNC	ENSG00000188487	tier1	-	-	57	0	0.00	17	9	34.62
GRK4	0	genome.wustl.edu	37	4	3015469	3015470	+	Frame_Shift_Ins	INS	-	-	A			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	4	3015469	3015470	-	A	INS	GRK4	ENST00000398052	human	ensembl	74_37	+1	known	frame_shift_ins	c.655_656	p.R222fs	1.000:1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	GRK4	HGNC	ENSG00000125388	tier1			50	0	0.00	53	5	8.62
MAMLD1	0	genome.wustl.edu	37	X	149671639	149671639	+	Missense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	X	149671639	149671639	G	T	SNP	MAMLD1	ENST00000262858	human	ensembl	74_37	+1	known	missense	c.2136	p.E712D	1.000	NULL	NULL	-	no_errors	MAMLD1	HGNC	ENSG00000013619	tier1	-	-	47	0	0.00	9	14	60.87
SUFU	0	genome.wustl.edu	37	10	104357026	104357026	+	Nonsense_Mutation	SNP	C	C	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	10	104357026	104357026	C	T	SNP	SUFU	ENST00000369902	human	ensembl	74_37	+1	known	nonsense	c.886	p.Q296*	1.000	pfam_SUFU_C,pirsf_Suppressor_of_fused_euk	pfam_SUFU_C,pfam_SUFU-like_domain,pirsf_Suppressor_of_fused_euk	-	no_errors	SUFU	HGNC	ENSG00000107882	tier1	-	-	56	0	0.00	17	17	50.00
CCNL2	0	genome.wustl.edu	37	1	1334664	1334666	+	In_Frame_Del	DEL	GCC	GCC	-			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	GCC	GCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	1	1334664	1334666	GCC	-	DEL	CCNL2	ENST00000400809	human	ensembl	74_37	-1	known	in_frame_del	c.23_21	p.A8in_frame_del	0.005:0.003:0.058	pirsf_Cyclin_L	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_L	-	no_errors	CCNL2	HGNC	ENSG00000221978	tier1			27	0	0.00	7	2	22.22
ZFYVE26	0	genome.wustl.edu	37	14	68250044	68250044	+	Silent	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	14	68250044	68250044	G	T	SNP	ZFYVE26	ENST00000347230	human	ensembl	74_37	-1	known	silent	c.3825	p.S1275	0.000	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE26	HGNC	ENSG00000072121	tier1	-	-	49	0	0.00	33	5	13.16
MFSD10	0	genome.wustl.edu	37	4	2934379	2934379	+	Missense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	4	2934379	2934379	G	T	SNP	MFSD10	ENST00000329687	human	ensembl	74_37	-1	known	missense	c.479	p.S160Y	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	MFSD10	HGNC	ENSG00000109736	tier1	-	-	41	0	0.00	13	5	27.78
OR2T2	0	genome.wustl.edu	37	1	248616705	248616711	+	Frame_Shift_Del	DEL	TGCTGCG	TGCTGCG	-			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	TGCTGCG	TGCTGCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	1	248616705	248616711	TGCTGCG	-	DEL	OR2T2	ENST00000342927	human	ensembl	74_37	+1	known	frame_shift_del	c.607_613	p.C204fs	0.000:0.001:0.000:0.000:0.000:0.000:0.001	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T2	HGNC	ENSG00000196240	tier1			NA	NA	NA	NA	NA	NA
DEFB105A	0	genome.wustl.edu	37	8	7679549	7679549	+	Missense_Mutation	SNP	C	C	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	8	7679549	7679549	C	T	SNP	DEFB105A	ENST00000334773	human	ensembl	74_37	-1	known	missense	c.218	p.C73Y	0.244	NULL	NULL	-	no_errors	DEFB105A	HGNC	ENSG00000186562	tier1	rs200757797	-	25	0	0.00	21	6	22.22
GNAS	0	genome.wustl.edu	37	20	57466892	57466892	+	Silent	SNP	C	C	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	20	57466892	57466892	C	T	SNP	GNAS	ENST00000354359	human	ensembl	74_37	+1	known	silent	c.111	p.Y37	0.996	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460	tier1	-	-	35	0	0.00	20	25	55.56
OR4F6	0	genome.wustl.edu	37	15	102346825	102346825	+	Silent	SNP	A	A	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	15	102346825	102346825	A	T	SNP	OR4F6	ENST00000328882	human	ensembl	74_37	+1	known	silent	c.903	p.R301	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4F6	HGNC	ENSG00000184140	tier1	-	-	56	0	0.00	25	34	57.63
NUMBL	0	genome.wustl.edu	37	19	41173893	41173898	+	In_Frame_Del	DEL	TGCTGT	TGCTGT	-			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	TGCTGT	TGCTGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	19	41173893	41173898	TGCTGT	-	DEL	NUMBL	ENST00000252891	human	ensembl	74_37	-1	known	in_frame_del	c.1310_1305	p.QQ439in_frame_del	1.000:1.000:1.000:1.000:1.000:0.998	pirsf_Numb/numb-like	pfam_Numb_domain,pfam_PTB/PI_dom,pfam_PTB,smart_PTB/PI_dom,pirsf_Numb/numb-like,pfscan_PTB/PI_dom	-	no_errors	NUMBL	HGNC	ENSG00000105245	tier1			NA	NA	NA	NA	NA	NA
UBE2K	0	genome.wustl.edu	37	4	39780193	39780193	+	RNA	SNP	G	G	A			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	4	39780193	39780193	G	A	SNP	UBE2K	ENST00000438068	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	UBE2K	HGNC	ENSG00000078140	tier1	-	-	48	0	0.00	42	5	10.42
NOTCH1	0	genome.wustl.edu	37	9	139409819	139409819	+	Missense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	9	139409819	139409819	G	T	SNP	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	missense	c.1937	p.A646D	1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_Notch,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400	tier1	-	-	79	0	0.00	34	4	10.53
GUCY2EP	0	genome.wustl.edu	37	11	76414357	76414357	+	RNA	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	11	76414357	76414357	G	T	SNP	GUCY2EP	ENST00000526984	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	GUCY2EP	HGNC	ENSG00000204529	tier1	-	-	42	0	0.00	34	4	10.53
TECPR2	0	genome.wustl.edu	37	14	102900692	102900692	+	Missense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	14	102900692	102900692	G	T	SNP	TECPR2	ENST00000359520	human	ensembl	74_37	+1	known	missense	c.1538	p.G513V	0.997	NULL	pfam_Beta-propeller_rpt_TECPR,superfamily_WD40_repeat_dom,superfamily_RCC1/BLIP-II,smart_WD40_repeat,smart_Beta-propeller_rpt_TECPR	-	no_errors	TECPR2	HGNC	ENSG00000196663	tier1	-	-	40	0	0.00	43	4	8.51
BMP2K	0	genome.wustl.edu	37	4	79792085	79792085	+	Missense_Mutation	SNP	G	G	C			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	4	79792085	79792085	G	C	SNP	BMP2K	ENST00000335016	human	ensembl	74_37	+1	known	missense	c.1380	p.Q460H	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BMP2K	HGNC	ENSG00000138756	tier1	-	-	79	0	0.00	24	3	10.71
GANAB	0	genome.wustl.edu	37	11	62396402	62396402	+	Missense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	11	62396402	62396402	G	T	SNP	GANAB	ENST00000346178	human	ensembl	74_37	-1	known	missense	c.2085	p.F695L	1.000	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom	-	no_errors	GANAB	HGNC	ENSG00000089597	tier1	-	-	37	0	0.00	45	4	8.16
ENSG00000216004	0	genome.wustl.edu	37	10	72975564	72975565	+	RNA	DEL	GT	GT	-			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	10	72975564	72975565	GT	-	DEL	ENSG00000216004	ENST00000401185	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.024:0.453	-	-	-	no_errors	AL359832.1	Clone_based_ensembl_gene	ENSG00000216004	tier1			15	0	0.00	28	8	22.22
KCNH5	0	genome.wustl.edu	37	14	63269288	63269288	+	Missense_Mutation	SNP	G	G	C			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	14	63269288	63269288	G	C	SNP	KCNH5	ENST00000322893	human	ensembl	74_37	-1	known	missense	c.1581	p.I527M	1.000	superfamily_cNMP-bd-like,prints_K_chnl_volt-dep_EAG	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH5	HGNC	ENSG00000140015	tier1	-	-	24	0	0.00	6	11	64.71
RYR1	0	genome.wustl.edu	37	19	39010003	39010003	+	Missense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	19	39010003	39010003	G	T	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	missense	c.10168	p.G3390C	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218	tier1	-	-	53	0	0.00	36	7	16.28
PDE1A	0	genome.wustl.edu	37	2	183066503	183066503	+	Missense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	2	183066503	183066503	G	T	SNP	PDE1A	ENST00000456212	human	ensembl	74_37	-1	known	missense	c.964	p.L322I	0.999	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	pfam_PDEase_catalytic_dom,pfam_PDEase_N,superfamily_GRIP,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE1A	HGNC	ENSG00000115252	tier1	-	-	42	0	0.00	51	9	15.00
FLRT2	0	genome.wustl.edu	37	14	86092517	86092517	+	RNA	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	14	86092517	86092517	G	T	SNP	FLRT2	ENST00000553650	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	FLRT2	HGNC	ENSG00000185070	tier1	-	-	37	0	0.00	10	21	67.74
RABL6	0	genome.wustl.edu	37	9	139734633	139734635	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	9	139734633	139734635	AGA	-	DEL	RABL6	ENST00000371663	human	ensembl	74_37	+1	known	in_frame_del	c.1961_1963	p.K658in_frame_del	1.000:1.000:1.000	NULL	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Rab_type,prints_Small_GTPase	-	no_errors	RABL6	HGNC	ENSG00000196642	tier1			35	0	0.00	23	3	11.54
RARB	0	genome.wustl.edu	37	3	25635144	25635144	+	Nonsense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	3	25635144	25635144	G	T	SNP	RARB	ENST00000404969	human	ensembl	74_37	+1	known	nonsense	c.958	p.E320*	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Retinoic_acid_rcpt,prints_Str_hrmn_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Nuc_orph_rcpt,prints_Retinoid-X_rcpt/HNF4	-	no_errors	RARB	HGNC	ENSG00000077092	tier1	-	-	79	0	0.00	37	4	9.76
ERN1	0	genome.wustl.edu	37	17	62133221	62133223	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	17	62133221	62133223	GCT	-	DEL	ERN1	ENST00000433197	human	ensembl	74_37	-1	known	in_frame_del	c.1486_1484	p.Q495in_frame_del	0.999:0.998:0.998	NULL	pfam_Prot_kinase_dom,pfam_KEN_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Quinonprotein_ADH-like_supfam,smart_PQQ_beta_propeller_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PUG-dom,pfscan_Prot_kinase_dom	-	no_errors	ERN1	HGNC	ENSG00000178607	tier1			19	0	0.00	14	2	12.50
SAMHD1	0	genome.wustl.edu	37	20	35545356	35545356	+	Missense_Mutation	SNP	C	C	A			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	20	35545356	35545356	C	A	SNP	SAMHD1	ENST00000262878	human	ensembl	74_37	-1	known	missense	c.949	p.A317S	1.000	pfam_HD_domain,smart_HD/PDEase_dom	pfam_HD_domain,pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,smart_HD/PDEase_dom,pfscan_SAM	-	no_errors	SAMHD1	HGNC	ENSG00000101347	tier1	-	-	72	0	0.00	29	53	64.63
TTR	0	genome.wustl.edu	37	18	29178578	29178578	+	Silent	SNP	C	C	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	18	29178578	29178578	C	T	SNP	TTR	ENST00000237014	human	ensembl	74_37	+1	known	silent	c.384	p.A128	0.085	pfam_Transthyretin/HIU_hydrolase_SF,superfamily_Transthyretin/HIU_hydrolase_SF,smart_Transthyretin/HIU_hydrolase_SF	pfam_Transthyretin/HIU_hydrolase_SF,superfamily_Transthyretin/HIU_hydrolase_SF,smart_Transthyretin/HIU_hydrolase_SF,prints_Transthyretin/HIU_hydrolase	-	no_errors	TTR	HGNC	ENSG00000118271	tier1	rs143906738	-	72	0	0.00	37	4	9.76
DLGAP1	0	genome.wustl.edu	37	18	3708389	3708389	+	RNA	DEL	G	G	-			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	18	3708389	3708389	G	-	DEL	DLGAP1	ENST00000498188	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DLGAP1	HGNC	ENSG00000170579	tier1			48	0	0.00	30	9	23.08
CYP2F1	0	genome.wustl.edu	37	19	41630690	41630690	+	Missense_Mutation	SNP	C	C	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	19	41630690	41630690	C	T	SNP	CYP2F1	ENST00000331105	human	ensembl	74_37	+1	known	missense	c.1031	p.A344V	0.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_CYP2_fam,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2F1	HGNC	ENSG00000197446	tier1	-	-	34	0	0.00	19	6	24.00
DEDD	0	genome.wustl.edu	37	1	161091814	161091815	+	RNA	INS	-	-	A			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	1	161091814	161091815	-	A	INS	DEDD	ENST00000486041	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.993:1.000	-	-	-	no_errors	DEDD	HGNC	ENSG00000158796	tier1			16	0	0.00	23	2	8.00
TTC22	0	genome.wustl.edu	37	1	55251790	55251790	+	Missense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	1	55251790	55251790	G	T	SNP	TTC22	ENST00000371276	human	ensembl	74_37	-1	known	missense	c.886	p.P296T	0.852	smart_TPR_repeat	smart_TPR_repeat	-	no_errors	TTC22	HGNC	ENSG00000006555	tier1	-	-	76	0	0.00	46	4	8.00
TMC1	0	genome.wustl.edu	37	9	75451137	75451137	+	RNA	DEL	T	T	-			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	9	75451137	75451137	T	-	DEL	TMC1	ENST00000486417	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TMC1	HGNC	ENSG00000165091	tier1			8	0	0.00	5	4	44.44
WBP2	0	genome.wustl.edu	37	17	73845736	73845736	+	Missense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	17	73845736	73845736	G	T	SNP	WBP2	ENST00000254806	human	ensembl	74_37	-1	known	missense	c.253	p.P85T	1.000	NULL	pfam_WW-domain-binding,pfam_GRAM	-	no_errors	WBP2	HGNC	ENSG00000132471	tier1	-	-	81	0	0.00	33	4	10.81
FAM189A2	0	genome.wustl.edu	37	9	72000789	72000789	+	Missense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	9	72000789	72000789	G	T	SNP	FAM189A2	ENST00000257515	human	ensembl	74_37	+1	known	missense	c.782	p.R261I	0.003	NULL	pfam_CD20-like	-	no_errors	FAM189A2	HGNC	ENSG00000135063	tier1	-	-	83	0	0.00	46	4	8.00
NR0B1	0	genome.wustl.edu	37	X	30326654	30326654	+	Missense_Mutation	SNP	T	T	C			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	X	30326654	30326654	T	C	SNP	NR0B1	ENST00000378970	human	ensembl	74_37	-1	known	missense	c.827	p.Q276R	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	-	no_errors	NR0B1	HGNC	ENSG00000169297	tier1	-	-	46	0	0.00	8	37	82.22
AQP4	0	genome.wustl.edu	37	18	24442131	24442131	+	RNA	SNP	A	A	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	18	24442131	24442131	A	T	SNP	AQP4	ENST00000583022	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	AQP4	HGNC	ENSG00000171885	tier1	-	-	30	0	0.00	25	9	26.47
BLOC1S5	0	genome.wustl.edu	37	6	8015405	8015406	+	RNA	INS	-	-	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	6	8015405	8015406	-	T	INS	BLOC1S5	ENST00000475998	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.000	-	-	-	no_errors	BLOC1S5	HGNC	ENSG00000188428	tier1			9	0	0.00	7	9	56.25
FBXW5	0	genome.wustl.edu	37	9	139835416	139835417	+	Frame_Shift_Del	DEL	GC	GC	-			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	9	139835416	139835417	GC	-	DEL	FBXW5	ENST00000325285	human	ensembl	74_37	-1	known	frame_shift_del	c.1665_1664	p.R555fs	0.927:0.986	NULL	pfam_WD40_repeat,pfam_F-box_dom,superfamily_Quinoprot_gluc/sorb_DH,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	FBXW5	HGNC	ENSG00000159069	tier1			79	0	0.00	17	2	10.53
ACSM5	0	genome.wustl.edu	37	16	20448601	20448601	+	Missense_Mutation	SNP	G	G	A			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	16	20448601	20448601	G	A	SNP	ACSM5	ENST00000331849	human	ensembl	74_37	+1	known	missense	c.1448	p.G483E	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM5	HGNC	ENSG00000183549	tier1	-	-	110	0	0.00	59	12	16.90
SPOCK3	0	genome.wustl.edu	37	4	167983668	167983668	+	Missense_Mutation	SNP	C	C	A			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	4	167983668	167983668	C	A	SNP	SPOCK3	ENST00000357154	human	ensembl	74_37	-1	known	missense	c.219	p.W73C	1.000	NULL	pfam_SPARC/Testican_Ca-bd-dom,pfam_Thyroglobulin_1,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	SPOCK3	HGNC	ENSG00000196104	tier1	-	-	97	0	0.00	135	80	37.21
PRR14L	0	genome.wustl.edu	37	22	32081555	32081555	+	Missense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	22	32081555	32081555	G	T	SNP	PRR14L	ENST00000327423	human	ensembl	74_37	-1	novel	missense	c.6414	p.F2138L	0.999	NULL	NULL	-	no_errors	PRR14L	HGNC	ENSG00000183530	tier1	-	-	42	0	0.00	18	3	14.29
RNF212	0	genome.wustl.edu	37	4	1087327	1087328	+	In_Frame_Ins	INS	-	-	CTGCCCAGGCTGGAGCCAGCC			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	4	1087327	1087328	-	CTGCCCAGGCTGGAGCCAGCC	INS	RNF212	ENST00000333673	human	ensembl	74_37	-1	known	in_frame_ins	c.722_721	p.S241in_frame_insWLAPAWAA	0.085:0.000	NULL	pfscan_Znf_RING	-	no_errors	RNF212	HGNC	ENSG00000178222	tier1			NA	NA	NA	NA	NA	NA
TTLL5	0	genome.wustl.edu	37	14	76246006	76246011	+	In_Frame_Del	DEL	AAGAAC	AAGAAC	-			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	AAGAAC	AAGAAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	14	76246006	76246011	AAGAAC	-	DEL	TTLL5	ENST00000298832	human	ensembl	74_37	+1	known	in_frame_del	c.2476_2481	p.KN826in_frame_del	0.997:1.000:0.997:0.983:1.000:1.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL5	HGNC	ENSG00000119685	tier1			NA	NA	NA	NA	NA	NA
ANKRD16	0	genome.wustl.edu	37	10	5929889	5929889	+	Silent	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	10	5929889	5929889	G	T	SNP	ANKRD16	ENST00000380092	human	ensembl	74_37	-1	known	silent	c.456	p.I152	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD16	HGNC	ENSG00000134461	tier1	-	-	36	0	0.00	23	4	14.81
PCDHB12	0	genome.wustl.edu	37	5	140588657	140588657	+	Missense_Mutation	SNP	T	T	C			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	5	140588657	140588657	T	C	SNP	PCDHB12	ENST00000239450	human	ensembl	74_37	+1	known	missense	c.178	p.S60P	0.006	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB12	HGNC	ENSG00000120328	tier1	-	-	74	0	0.00	46	29	38.67
ENDOU	0	genome.wustl.edu	37	12	48110109	48110109	+	Missense_Mutation	SNP	T	T	G			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	12	48110109	48110109	T	G	SNP	ENDOU	ENST00000229003	human	ensembl	74_37	-1	known	missense	c.602	p.E201A	1.000	pfam_Endoribonuclease_XendoU	pfam_Endoribonuclease_XendoU,pfam_Somatomedin_B_dom,smart_Somatomedin_B_dom,pfscan_Somatomedin_B_dom,prints_Somatomedin_B_chordata	-	no_errors	ENDOU	HGNC	ENSG00000111405	tier1	-	-	39	0	0.00	16	16	48.48
SLC9A4	0	genome.wustl.edu	37	2	103148889	103148889	+	Missense_Mutation	SNP	G	G	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	2	103148889	103148889	G	T	SNP	SLC9A4	ENST00000295269	human	ensembl	74_37	+1	known	missense	c.2139	p.M713I	0.976	NULL	pfam_Cation/H_exchanger,prints_NaH_exchanger,prints_Na/H_exchanger_2,tigrfam_NaH_exchanger	-	no_errors	SLC9A4	HGNC	ENSG00000180251	tier1	-	-	49	0	0.00	31	17	35.42
ULBP1	0	genome.wustl.edu	37	6	150290442	150290442	+	Nonsense_Mutation	SNP	A	A	T			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	6	150290442	150290442	A	T	SNP	ULBP1	ENST00000229708	human	ensembl	74_37	+1	known	nonsense	c.571	p.K191*	0.000	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	-	no_errors	ULBP1	HGNC	ENSG00000111981	tier1	-	-	29	0	0.00	37	4	9.76
ZCCHC7	0	genome.wustl.edu	37	9	37357249	37357250	+	Frame_Shift_Ins	INS	-	-	A			TCGA-X9-A973-01A-11D-A387-09	TCGA-X9-A973-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	231a60ba-0cbf-4e49-80b9-fb79251a0329	3a81eddf-cc20-47e1-ba2e-5bc21240b8d9	9	37357249	37357250	-	A	INS	ZCCHC7	ENST00000336755	human	ensembl	74_37	+1	known	frame_shift_ins	c.1616_1617	p.K543fs	1.000:1.000	NULL	pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC7	HGNC	ENSG00000147905	tier1			14	0	0.00	42	4	8.70
