Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
RPS6KL1	0	genome.wustl.edu	37	14	75385227	75385227	+	Missense_Mutation	SNP	C	C	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	14	75385227	75385227	C	T	SNP	RPS6KL1	ENST00000358328	human	ensembl	74_37	-1	known	missense	c.472	p.V158I	0.994	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_MIT,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_MIT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	RPS6KL1	HGNC	ENSG00000198208	tier1	-	-	75	0	0.00	43	4	8.51
FAM120C	0	genome.wustl.edu	37	X	54209302	54209303	+	In_Frame_Ins	INS	-	-	GGCGGC			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	X	54209302	54209303	-	GGCGGC	INS	FAM120C	ENST00000375180	human	ensembl	74_37	-1	known	in_frame_ins	c.330_329	p.112in_frame_insPP	0.999:0.998	NULL	NULL	-	no_errors	FAM120C	HGNC	ENSG00000184083	tier1			NA	NA	NA	NA	NA	NA
FAM120A	0	genome.wustl.edu	37	9	96259883	96259884	+	Splice_Site	INS	-	-	A			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	9	96259883	96259884	-	A	INS	FAM120A	ENST00000333936	human	ensembl	74_37	+1	known	splice_site_ins	c.933+2_933+1	e4+2	1.000:0.997	-	-	-	no_errors	FAM120A	HGNC	ENSG00000048828	tier1			38	0	0.00	26	4	13.33
INPP5F	0	genome.wustl.edu	37	10	121579042	121579042	+	Missense_Mutation	SNP	C	C	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	10	121579042	121579042	C	T	SNP	INPP5F	ENST00000369080	human	ensembl	74_37	+1	known	missense	c.47	p.S16L	0.003	NULL	pfam_Inositol_phosphatase	-	no_errors	INPP5F	HGNC	ENSG00000198825	tier1	-	-	30	0	0.00	21	3	12.50
ZNF536	0	genome.wustl.edu	37	19	31039902	31039902	+	Missense_Mutation	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	19	31039902	31039902	G	T	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	missense	c.3376	p.A1126S	0.109	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597	tier1	-	-	40	0	0.00	36	4	10.00
ROS1	0	genome.wustl.edu	37	6	117678005	117678005	+	Missense_Mutation	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	6	117678005	117678005	G	T	SNP	ROS1	ENST00000368508	human	ensembl	74_37	-1	known	missense	c.3928	p.H1310N	0.975	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_LDLR_classB_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ROS1	HGNC	ENSG00000047936	tier1	-	-	69	0	0.00	46	4	8.00
PRC1	0	genome.wustl.edu	37	15	91510426	91510426	+	Missense_Mutation	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	15	91510426	91510426	G	T	SNP	PRC1	ENST00000394249	human	ensembl	74_37	-1	known	missense	c.1798	p.L600I	1.000	pfam_MAP65_Ase1_PRC1	pfam_MAP65_Ase1_PRC1	-	no_errors	PRC1	HGNC	ENSG00000198901	tier1	-	-	43	0	0.00	25	4	13.79
CCDC93	0	genome.wustl.edu	37	2	118706947	118706947	+	Missense_Mutation	SNP	C	C	A			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	2	118706947	118706947	C	A	SNP	CCDC93	ENST00000376300	human	ensembl	74_37	-1	known	missense	c.1093	p.D365Y	1.000	NULL	pfam_DUF2037	-	no_errors	CCDC93	HGNC	ENSG00000125633	tier1	-	-	81	0	0.00	46	4	8.00
C12orf50	0	genome.wustl.edu	37	12	88388424	88388424	+	Missense_Mutation	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	12	88388424	88388424	G	T	SNP	C12orf50	ENST00000298699	human	ensembl	74_37	-1	known	missense	c.578	p.A193D	1.000	NULL	NULL	-	no_errors	C12orf50	HGNC	ENSG00000165805	tier1	-	-	76	0	0.00	31	4	11.43
PRRC2C	0	genome.wustl.edu	37	1	171510647	171510647	+	Nonsense_Mutation	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	1	171510647	171510647	G	T	SNP	PRRC2C	ENST00000392078	human	ensembl	74_37	+1	known	nonsense	c.4042	p.G1348*	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2C	HGNC	ENSG00000117523	tier1	-	-	24	0	0.00	12	4	25.00
SEC16A	0	genome.wustl.edu	37	9	139341406	139341406	+	Silent	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	9	139341406	139341406	G	T	SNP	SEC16A	ENST00000313084	human	ensembl	74_37	-1	known	silent	c.777	p.S259	0.415	NULL	NULL	-	no_errors	SEC16A	HGNC	ENSG00000148396	tier1	-	-	50	0	0.00	29	4	12.12
CAMSAP2	0	genome.wustl.edu	37	1	200818301	200818301	+	Nonsense_Mutation	SNP	C	C	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	1	200818301	200818301	C	T	SNP	CAMSAP2	ENST00000236925	human	ensembl	74_37	+1	known	nonsense	c.2437	p.R813*	0.980	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP2	HGNC	ENSG00000118200	tier1	-	-	19	0	0.00	13	3	18.75
ZNF671	0	genome.wustl.edu	37	19	58232323	58232323	+	Missense_Mutation	SNP	A	A	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	19	58232323	58232323	A	T	SNP	ZNF671	ENST00000317398	human	ensembl	74_37	-1	known	missense	c.1131	p.F377L	0.026	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF671	HGNC	ENSG00000083814	tier1	-	-	35	0	0.00	16	8	33.33
SERAC1	0	genome.wustl.edu	37	6	158569980	158569980	+	Missense_Mutation	SNP	G	G	A			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	6	158569980	158569980	G	A	SNP	SERAC1	ENST00000367104	human	ensembl	74_37	-1	known	missense	c.272	p.A91V	0.680	NULL	pfam_PGAP1-like,superfamily_ARM-type_fold	-	no_errors	SERAC1	HGNC	ENSG00000122335	tier1	-	-	75	0	0.00	36	4	10.00
MAP4K1	0	genome.wustl.edu	37	19	39088139	39088139	+	Missense_Mutation	SNP	G	G	A			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	19	39088139	39088139	G	A	SNP	MAP4K1	ENST00000591517	human	ensembl	74_37	-1	known	missense	c.1765	p.R589C	1.000	pfam_Citron,smart_Citron	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP4K1	HGNC	ENSG00000104814	tier1	-	-	40	0	0.00	38	10	20.83
CUTC	0	genome.wustl.edu	37	10	101503811	101503811	+	Missense_Mutation	SNP	C	C	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	10	101503811	101503811	C	T	SNP	CUTC	ENST00000370476	human	ensembl	74_37	+1	known	missense	c.421	p.P141S	1.000	pfam_Cu_homeostasis_CutC,superfamily_Cu_homeostasis_CutC_dom	pfam_Cu_homeostasis_CutC,superfamily_Cu_homeostasis_CutC_dom	-	no_errors	CUTC	HGNC	ENSG00000119929	tier1	-	-	59	0	0.00	41	4	8.89
ABCA2	0	genome.wustl.edu	37	9	139915890	139915890	+	Missense_Mutation	SNP	G	G	A			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	9	139915890	139915890	G	A	SNP	ABCA2	ENST00000265662	human	ensembl	74_37	-1	known	missense	c.851	p.S284F	0.986	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA2	HGNC	ENSG00000107331	tier1	-	-	21	0	0.00	13	3	18.75
CCDC132	0	genome.wustl.edu	37	7	92938151	92938151	+	Nonsense_Mutation	SNP	C	C	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	7	92938151	92938151	C	T	SNP	CCDC132	ENST00000305866	human	ensembl	74_37	+1	known	nonsense	c.1645	p.Q549*	1.000	NULL	pfam_Vacuolar_sorting-assoc_54,pfam_DUF2451_C	-	no_errors	CCDC132	HGNC	ENSG00000004766	tier1	-	-	49	0	0.00	19	7	26.92
MYADML	0	genome.wustl.edu	37	2	33951639	33951640	+	RNA	INS	-	-	GCTAGG			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	2	33951639	33951640	-	GCTAGG	INS	MYADML	ENST00000474610	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.441:0.327	-	-	-	no_errors	MYADML	HGNC	ENSG00000239649	tier1			NA	NA	NA	NA	NA	NA
ZNF236	0	genome.wustl.edu	37	18	74607185	74607185	+	Missense_Mutation	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	18	74607185	74607185	G	T	SNP	ZNF236	ENST00000253159	human	ensembl	74_37	+1	known	missense	c.1628	p.C543F	0.992	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF236	HGNC	ENSG00000130856	tier1	-	-	25	0	0.00	18	4	18.18
FAM3A	0	genome.wustl.edu	37	X	153735238	153735238	+	Splice_Site	SNP	C	C	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	X	153735238	153735238	C	T	SNP	FAM3A	ENST00000359889	human	ensembl	74_37	-1	known	splice_site	c.598-1	e9-1	1.000	-	-	-	no_errors	FAM3A	HGNC	ENSG00000071889	tier1	-	-	62	0	0.00	20	3	13.04
LOC101927648	0	genome.wustl.edu	37	1	143355600	143355600	+	RNA	SNP	G	G	A			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	1	143355600	143355600	G	A	SNP	LOC101927648	ENST00000423249	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-435B5.4	Clone_based_vega_gene	ENSG00000185044	tier1	-	-	24	0	0.00	10	5	33.33
ARHGEF11	0	genome.wustl.edu	37	1	156948122	156948122	+	Silent	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	1	156948122	156948122	G	T	SNP	ARHGEF11	ENST00000368194	human	ensembl	74_37	-1	known	silent	c.384	p.G128	0.078	NULL	pfam_RGS-like_dom,pfam_DH-domain,pfam_PDZ,pfam_RGS_dom,superfamily_DH-domain,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_Regulat_G_prot_signal_superfam,smart_DH-domain,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Regulat_G_prot_signal_superfam,pfscan_DH-domain	-	no_errors	ARHGEF11	HGNC	ENSG00000132694	tier1	-	-	35	0	0.00	32	4	11.11
RUFY4	0	genome.wustl.edu	37	2	218940448	218940448	+	Silent	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	2	218940448	218940448	G	T	SNP	RUFY4	ENST00000374155	human	ensembl	74_37	+1	known	silent	c.1293	p.L431	0.998	NULL	pfam_Run,superfamily_Znf_FYVE_PHD,smart_Run,pfscan_Run	-	no_errors	RUFY4	HGNC	ENSG00000188282	tier1	-	-	23	0	0.00	16	3	15.79
NRBF2	0	genome.wustl.edu	37	10	64913658	64913658	+	Missense_Mutation	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	10	64913658	64913658	G	T	SNP	NRBF2	ENST00000277746	human	ensembl	74_37	+1	known	missense	c.544	p.V182L	1.000	pfam_DUF1875	pfam_DUF1875	-	no_errors	NRBF2	HGNC	ENSG00000148572	tier1	-	-	77	0	0.00	51	5	8.93
OR2C3	0	genome.wustl.edu	37	1	247694953	247694953	+	Missense_Mutation	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	1	247694953	247694953	G	T	SNP	OR2C3	ENST00000366487	human	ensembl	74_37	-1	known	missense	c.861	p.N287K	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2C3	HGNC	ENSG00000196242	tier1	-	-	47	0	0.00	33	4	10.81
OR7D2	0	genome.wustl.edu	37	19	9297316	9297316	+	Missense_Mutation	SNP	C	C	G			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	19	9297316	9297316	C	G	SNP	OR7D2	ENST00000344248	human	ensembl	74_37	+1	known	missense	c.859	p.P287A	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7D2	HGNC	ENSG00000188000	tier1	-	-	48	0	0.00	27	5	15.62
PRTG	0	genome.wustl.edu	37	15	55970112	55970112	+	Missense_Mutation	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	15	55970112	55970112	G	T	SNP	PRTG	ENST00000389286	human	ensembl	74_37	-1	known	missense	c.1264	p.P422T	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	PRTG	HGNC	ENSG00000166450	tier1	-	-	55	0	0.00	19	3	13.64
PSD4	0	genome.wustl.edu	37	2	113942980	113942980	+	Frame_Shift_Del	DEL	T	T	-			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	2	113942980	113942980	T	-	DEL	PSD4	ENST00000245796	human	ensembl	74_37	+1	known	frame_shift_del	c.1212	p.W406fs	0.582	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD4	HGNC	ENSG00000125637	tier1			51	0	0.00	20	4	16.67
SETMAR	0	genome.wustl.edu	37	3	4355513	4355513	+	Missense_Mutation	SNP	C	C	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	3	4355513	4355513	C	T	SNP	SETMAR	ENST00000430981	human	ensembl	74_37	+1	known	missense	c.1088	p.T363I	0.000	NULL	pfam_SET_dom,pfam_Pre-SET_dom,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,pfscan_Post-SET_dom	-	no_errors	SETMAR	HGNC	ENSG00000170364	tier1	-	-	49	0	0.00	31	4	11.43
ATRNL1	0	genome.wustl.edu	37	10	117308997	117308997	+	Missense_Mutation	SNP	C	C	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	10	117308997	117308997	C	T	SNP	ATRNL1	ENST00000355044	human	ensembl	74_37	+1	known	missense	c.3746	p.A1249V	1.000	NULL	pfam_Kelch_1,pfam_Kelch_2,pfam_Plexin_repeat,pfam_CUB_dom,pfam_EGF_extracell,superfamily_C-type_lectin_fold,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_EG-like_dom,smart_CUB_dom,smart_Plexin-like_fold,smart_C-type_lectin,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_C-type_lectin	-	no_errors	ATRNL1	HGNC	ENSG00000107518	tier1	-	-	55	0	0.00	27	6	18.18
TRPA1	0	genome.wustl.edu	37	8	72935420	72935458	+	RNA	DEL	GCATAGGTTTTAACCTCGGTCCCTTCTGAATGTAGGAAC	GCATAGGTTTTAACCTCGGTCCCTTCTGAATGTAGGAAC	-			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	GCATAGGTTTTAACCTCGGTCCCTTCTGAATGTAGGAAC	GCATAGGTTTTAACCTCGGTCCCTTCTGAATGTAGGAAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	8	72935420	72935458	GCATAGGTTTTAACCTCGGTCCCTTCTGAATGTAGGAAC	-	DEL	TRPA1	ENST00000520596	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.001:0.001:0.001:0.001:0.000:0.000:0.000:0.000:0.000:0.002:0.002:0.000:0.000:0.000:0.000:0.000:0.001:0.002:0.001:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000	-	-	-	no_errors	TRPA1	HGNC	ENSG00000104321	tier1			NA	NA	NA	NA	NA	NA
CSMD1	0	genome.wustl.edu	37	8	2831976	2831976	+	Missense_Mutation	SNP	T	T	C			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	8	2831976	2831976	T	C	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.8740	p.T2914A	0.972	pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	49	0	0.00	29	4	12.12
ZBTB38	0	genome.wustl.edu	37	3	141164143	141164143	+	Missense_Mutation	SNP	T	T	A			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	3	141164143	141164143	T	A	SNP	ZBTB38	ENST00000321464	human	ensembl	74_37	+1	known	missense	c.2916	p.F972L	0.000	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB38	HGNC	ENSG00000177311	tier1	-	-	22	0	0.00	12	3	20.00
TRAPPC12	0	genome.wustl.edu	37	2	3391677	3391677	+	Nonsense_Mutation	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	2	3391677	3391677	G	T	SNP	TRAPPC12	ENST00000324266	human	ensembl	74_37	+1	known	nonsense	c.283	p.G95*	0.000	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TRAPPC12	HGNC	ENSG00000171853	tier1	-	-	20	0	0.00	7	3	30.00
ZNF462	0	genome.wustl.edu	37	9	109765593	109765593	+	Silent	SNP	C	C	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	9	109765593	109765593	C	T	SNP	ZNF462	ENST00000457913	human	ensembl	74_37	+1	known	silent	c.7255	p.L2419	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF462	HGNC	ENSG00000148143	tier1	-	-	62	0	0.00	41	4	8.89
CD3EAP	0	genome.wustl.edu	37	19	45912297	45912297	+	Silent	SNP	G	G	A			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	19	45912297	45912297	G	A	SNP	CD3EAP	ENST00000589804	human	ensembl	74_37	+1	known	silent	c.1077	p.L359	0.006	NULL	pfam_DNA-dir_RNA_pol1_su_RPA34	-	no_errors	CD3EAP	HGNC	ENSG00000117877	tier1	-	-	92	0	0.00	65	7	9.72
ENSG00000272815	0	genome.wustl.edu	37	17	16715808	16715808	+	RNA	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	17	16715808	16715808	G	T	SNP	ENSG00000272815	ENST00000602730	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-219A15.4	Clone_based_vega_gene	ENSG00000272815	tier1	-	-	114	1	0.86	88	8	8.33
ZNF326	0	genome.wustl.edu	37	1	90492954	90492954	+	Silent	SNP	G	G	A			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	1	90492954	90492954	G	A	SNP	ZNF326	ENST00000340281	human	ensembl	74_37	+1	known	silent	c.1443	p.Q481	0.994	NULL	pfam_AKAP95	-	no_errors	ZNF326	HGNC	ENSG00000162664	tier1	-	-	41	0	0.00	29	3	9.09
KIAA0430	0	genome.wustl.edu	37	16	15696480	15696481	+	Frame_Shift_Ins	INS	-	-	AGGAAAGAAGGAGGGAGGCAGAG			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	16	15696480	15696481	-	AGGAAAGAAGGAGGGAGGCAGAG	INS	KIAA0430	ENST00000344181	human	ensembl	74_37	-1	known	frame_shift_ins	c.3339_3338	p.P1114fs	0.000:0.000	NULL	pfam_Limkain_b1_cons_dom,pfam_NYN_limkain-b1,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	KIAA0430	HGNC	ENSG00000166783	tier1			NA	NA	NA	NA	NA	NA
SOX11	0	genome.wustl.edu	37	2	5833526	5833528	+	In_Frame_Del	DEL	GAC	GAC	-			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	GAC	GAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	2	5833526	5833528	GAC	-	DEL	SOX11	ENST00000322002	human	ensembl	74_37	+1	known	in_frame_del	c.673_675	p.D228in_frame_del	1.000:1.000:0.999	pirsf_SOX-12/11/4a	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pirsf_SOX-12/11/4a,pfscan_HMG_box_dom	-	no_errors	SOX11	HGNC	ENSG00000176887	tier1			35	0	0.00	27	5	15.62
LRRC7	0	genome.wustl.edu	37	1	70477507	70477507	+	Missense_Mutation	SNP	T	T	G			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	1	70477507	70477507	T	G	SNP	LRRC7	ENST00000035383	human	ensembl	74_37	+1	known	missense	c.918	p.C306W	0.956	NULL	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	LRRC7	HGNC	ENSG00000033122	tier1	-	-	61	0	0.00	31	11	26.19
THBD	0	genome.wustl.edu	37	20	23030031	23030031	+	Silent	SNP	C	C	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	20	23030031	23030031	C	T	SNP	THBD	ENST00000377103	human	ensembl	74_37	-1	known	silent	c.111	p.A37	0.001	pirsf_CD93/CD141,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pirsf_CD93/CD141,pfam_Tme5_EGF-like,pfam_EGF-like_Ca-bd_dom,superfamily_C-type_lectin_fold,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,prints_Thrombomodulin,pfscan_C-type_lectin	-	no_errors	THBD	HGNC	ENSG00000178726	tier1	-	-	18	0	0.00	8	3	27.27
NOL4	0	genome.wustl.edu	37	18	31523144	31523145	+	Splice_Site	INS	-	-	A			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	18	31523144	31523145	-	A	INS	NOL4	ENST00000261592	human	ensembl	74_37	-1	known	splice_site_ins	c.1429-3_1429-2	e9-2	1.000:1.000	-	-	-	no_errors	NOL4	HGNC	ENSG00000101746	tier1			13	0	0.00	10	2	16.67
C6orf10	0	genome.wustl.edu	37	6	32322900	32322900	+	Splice_Site	SNP	C	C	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	6	32322900	32322900	C	T	SNP	C6orf10	ENST00000447241	human	ensembl	74_37	-1	known	splice_site	c.259+1	e8+1	0.992	-	-	-	no_errors	C6orf10	HGNC	ENSG00000204296	tier1	-	-	39	0	0.00	38	4	9.52
CHD2	0	genome.wustl.edu	37	15	93540315	93540316	+	Frame_Shift_Ins	INS	-	-	A			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	15	93540315	93540316	-	A	INS	CHD2	ENST00000557381	human	ensembl	74_37	+1	putative	frame_shift_ins	c.3724_3725	p.Y1246fs	1.000:1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Homeodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD2	HGNC	ENSG00000173575	tier1			44	0	0.00	37	4	9.76
ROBO3	0	genome.wustl.edu	37	11	124742797	124742797	+	Missense_Mutation	SNP	C	C	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	11	124742797	124742797	C	T	SNP	ROBO3	ENST00000397801	human	ensembl	74_37	+1	known	missense	c.1348	p.P450S	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO3	HGNC	ENSG00000154134	tier1	-	-	57	0	0.00	33	4	10.81
SPPL2B	0	genome.wustl.edu	37	19	2341094	2341101	+	RNA	DEL	CTCCCTGG	CTCCCTGG	-			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	CTCCCTGG	CTCCCTGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	19	2341094	2341101	CTCCCTGG	-	DEL	SPPL2B	ENST00000592738	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.010:0.001:0.000:0.000:0.001:0.000	-	-	-	no_errors	SPPL2B	HGNC	ENSG00000005206	tier1			NA	NA	NA	NA	NA	NA
TRPM1	0	genome.wustl.edu	37	15	31341608	31341608	+	Silent	SNP	G	G	A			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	15	31341608	31341608	G	A	SNP	TRPM1	ENST00000542188	human	ensembl	74_37	-1	known	silent	c.1593	p.T531	0.991	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM1	HGNC	ENSG00000134160	tier1	-	-	47	0	0.00	45	4	8.16
TNR	0	genome.wustl.edu	37	1	175355259	175355259	+	Missense_Mutation	SNP	C	C	G			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	1	175355259	175355259	C	G	SNP	TNR	ENST00000263525	human	ensembl	74_37	-1	known	missense	c.1686	p.Q562H	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNR	HGNC	ENSG00000116147	tier1	-	-	36	0	0.00	25	10	28.57
DENND2C	0	genome.wustl.edu	37	1	115129946	115129946	+	RNA	SNP	G	G	A			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	1	115129946	115129946	G	A	SNP	DENND2C	ENST00000481894	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.334	-	-	-	no_errors	DENND2C	HGNC	ENSG00000175984	tier1	-	-	30	0	0.00	15	3	16.67
CNTD1	0	genome.wustl.edu	37	17	40951000	40951000	+	RNA	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	17	40951000	40951000	G	T	SNP	CNTD1	ENST00000591559	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CNTD1	HGNC	ENSG00000176563	tier1	-	-	41	0	0.00	29	4	12.12
MGA	0	genome.wustl.edu	37	15	42003273	42003273	+	Missense_Mutation	SNP	A	A	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	15	42003273	42003273	A	T	SNP	MGA	ENST00000219905	human	ensembl	74_37	+1	known	missense	c.2810	p.K937M	0.966	NULL	pfam_TF_T-box,pfam_bHLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_bHLH_dom,smart_TF_T-box,smart_bHLH_dom,pfscan_bHLH_dom,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197	tier1	-	-	45	0	0.00	31	3	8.82
PKHD1L1	0	genome.wustl.edu	37	8	110416813	110416813	+	Nonsense_Mutation	SNP	C	C	A			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	8	110416813	110416813	C	A	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	nonsense	c.1404	p.Y468*	0.005	smart_PA14	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038	tier1	-	-	49	0	0.00	37	5	11.90
ZDHHC6	0	genome.wustl.edu	37	10	114194138	114194138	+	Nonsense_Mutation	SNP	G	G	A			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	10	114194138	114194138	G	A	SNP	ZDHHC6	ENST00000369405	human	ensembl	74_37	-1	known	nonsense	c.820	p.Q274*	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfam_SH3_2,superfamily_SH3_domain,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC6	HGNC	ENSG00000023041	tier1	-	-	60	0	0.00	32	5	13.51
CDON	0	genome.wustl.edu	37	11	125831880	125831880	+	Frame_Shift_Del	DEL	T	T	-			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	11	125831880	125831880	T	-	DEL	CDON	ENST00000392693	human	ensembl	74_37	-1	known	frame_shift_del	c.3370	p.T1124fs	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CDON	HGNC	ENSG00000064309	tier1			34	0	0.00	21	2	8.70
EEF1DP3	0	genome.wustl.edu	37	13	32527290	32527290	+	RNA	SNP	C	C	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	13	32527290	32527290	C	T	SNP	EEF1DP3	ENST00000428783	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	EEF1DP3	HGNC	ENSG00000229715	tier1	-	-	75	0	0.00	46	4	8.00
KCND2	0	genome.wustl.edu	37	7	120382581	120382581	+	Missense_Mutation	SNP	G	G	T			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	7	120382581	120382581	G	T	SNP	KCND2	ENST00000331113	human	ensembl	74_37	+1	known	missense	c.1392	p.Q464H	1.000	pfam_K_chnl_volt-dep_Kv4_C,prints_K_chnl_volt-dep_Kv4.2	pfam_K_chnl_volt-dep_Kv4_C,pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_Shal-type,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.2,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCND2	HGNC	ENSG00000184408	tier1	-	-	55	0	0.00	43	4	8.51
WT1-AS	0	genome.wustl.edu	37	11	32461985	32461985	+	RNA	SNP	T	T	C			TCGA-Z4-A8JB-01A-23D-A37C-09	TCGA-Z4-A8JB-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	693ee45f-0cc9-45e1-8b05-bfb08253990a	ef7ae782-355b-4982-8713-82dfdb7e1fab	11	32461985	32461985	T	C	SNP	WT1-AS	ENST00000395900	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.329	-	-	-	no_errors	WT1-AS	HGNC	ENSG00000183242	tier1	-	-	54	0	0.00	24	3	11.11
