Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
DNAH5	0	genome.wustl.edu	37	5	13811901	13811901	+	Missense_Mutation	SNP	G	G	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	5	13811901	13811901	G	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.7262	p.A2421E	0.996	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	26	0	0.00	35	4	10.26
OSBP2	0	genome.wustl.edu	37	22	31091420	31091420	+	Missense_Mutation	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	22	31091420	31091420	C	T	SNP	OSBP2	ENST00000332585	human	ensembl	74_37	+1	known	missense	c.524	p.A175V	0.100	NULL	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,superfamily_DNA-bd_dom_put,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBP2	HGNC	ENSG00000184792	tier1	-	-	23	0	0.00	24	4	14.29
PIK3CA	0	genome.wustl.edu	37	3	178952146	178952147	+	Frame_Shift_Ins	INS	-	-	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	3	178952146	178952147	-	A	INS	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	frame_shift_ins	c.3201_3202	p.N1067fs	1.000:1.000	pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	tier1			15	0	0.00	14	8	36.36
PTEN	0	genome.wustl.edu	37	10	89692818	89692818	+	Missense_Mutation	SNP	T	T	C			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	10	89692818	89692818	T	C	SNP	PTEN	ENST00000371953	human	ensembl	74_37	+1	known	missense	c.302	p.I101T	1.000	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Phosphatase_tensin-typ	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_dom,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862	tier1	-	-	55	0	0.00	46	18	28.12
VAV2	0	genome.wustl.edu	37	9	136857268	136857268	+	Nonsense_Mutation	SNP	G	G	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	9	136857268	136857268	G	A	SNP	VAV2	ENST00000371850	human	ensembl	74_37	-1	known	nonsense	c.133	p.Q45*	1.000	pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_DH-domain,pfam_SH3_2,pfam_CAMSAP_CH,pfam_SH3_domain,pfam_SH2,pfam_CH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,smart_SH2,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain,prints_SH2,prints_SH3_domain	-	no_errors	VAV2	HGNC	ENSG00000160293	tier1	-	-	29	0	0.00	35	4	10.26
TXNDC5	0	genome.wustl.edu	37	6	7884718	7884718	+	Silent	SNP	A	A	G			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	6	7884718	7884718	A	G	SNP	TXNDC5	ENST00000379757	human	ensembl	74_37	-1	known	silent	c.1050	p.C350	0.986	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,prints_Thioredoxin	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,tigrfam_Disulphide_isomerase	-	no_errors	TXNDC5	HGNC	ENSG00000239264	tier1	-	-	32	0	0.00	38	4	9.52
CCDC146	0	genome.wustl.edu	37	7	76866305	76866305	+	Silent	SNP	G	G	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	7	76866305	76866305	G	A	SNP	CCDC146	ENST00000285871	human	ensembl	74_37	+1	known	silent	c.198	p.A66	1.000	NULL	NULL	-	no_errors	CCDC146	HGNC	ENSG00000135205	tier1	-	-	33	0	0.00	19	25	56.82
WWC2-AS2	0	genome.wustl.edu	37	4	184019469	184019469	+	RNA	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	4	184019469	184019469	C	T	SNP	WWC2-AS2	ENST00000506413	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	WWC2-AS2	HGNC	ENSG00000251359	tier1	-	-	21	0	0.00	23	8	25.81
TRIM6	0	genome.wustl.edu	37	11	5632583	5632583	+	RNA	SNP	G	G	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	11	5632583	5632583	G	T	SNP	TRIM6	ENST00000481603	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TRIM6	HGNC	ENSG00000121236	tier1	-	-	39	0	0.00	32	4	11.11
ZNF271	0	genome.wustl.edu	37	18	32888074	32888074	+	RNA	SNP	T	T	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	18	32888074	32888074	T	A	SNP	ZNF271	ENST00000399070	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	ZNF271	HGNC	ENSG00000257267	tier1	-	-	39	0	0.00	41	7	14.58
ENSG00000259241	0	genome.wustl.edu	37	15	51987960	51987960	+	RNA	DEL	A	A	-			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	15	51987960	51987960	A	-	DEL	ENSG00000259241	ENST00000559918	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	RP11-313P18.2	Clone_based_vega_gene	ENSG00000259241	tier1			12	0	0.00	18	2	10.00
OR52R1	0	genome.wustl.edu	37	11	4825844	4825844	+	Missense_Mutation	SNP	A	A	G			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	11	4825844	4825844	A	G	SNP	OR52R1	ENST00000380382	human	ensembl	74_37	-1	known	missense	c.4	p.F2L	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52R1	HGNC	ENSG00000176937	tier1	-	-	42	0	0.00	18	21	53.85
TPRKB	0	genome.wustl.edu	37	2	73957880	73957881	+	RNA	INS	-	-	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	2	73957880	73957881	-	A	INS	TPRKB	ENST00000485758	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.004	-	-	-	no_errors	TPRKB	HGNC	ENSG00000144034	tier1			26	0	0.00	30	4	11.76
DNAH6	0	genome.wustl.edu	37	2	84745169	84745169	+	Missense_Mutation	SNP	G	G	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	2	84745169	84745169	G	T	SNP	DNAH6	ENST00000237449	human	ensembl	74_37	+1	known	missense	c.219	p.E73D	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH6	HGNC	ENSG00000115423	tier1	-	-	29	0	0.00	46	4	8.00
MPHOSPH8	0	genome.wustl.edu	37	13	20224332	20224332	+	Missense_Mutation	SNP	G	G	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	13	20224332	20224332	G	T	SNP	MPHOSPH8	ENST00000414242	human	ensembl	74_37	+1	known	missense	c.1508	p.W503L	1.000	NULL	pfam_Ankyrin_rpt,pfam_Chromo_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Chromo_domain/shadow	-	no_errors	MPHOSPH8	HGNC	ENSG00000196199	tier1	-	-	56	0	0.00	44	4	8.16
MT-CO2	0	genome.wustl.edu	37	MT	7814	7814	+	Missense_Mutation	SNP	G	G	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	MT	7814	7814	G	A	SNP	MT-CO2	ENST00000361739	human	ensembl	74_37	+1	known	missense	c.229	p.A77T	NULL	pfam_Cyt_c_oxidase_su2_TM_dom,superfamily_Cyt_c_oxidase_su2_TM_dom,pfscan_Cyt_c_oxidase_su2_TM_dom,tigrfam_Cyt_c_oxidase_su2	pfam_Cyt_c_oxidase_su2_C,pfam_Cyt_c_oxidase_su2_TM_dom,superfamily_Cupredoxin,superfamily_Cyt_c_oxidase_su2_TM_dom,pfscan_Cyt_c_oxidase_su2_TM_dom,pfscan_Cyt_c_oxidase_su2_C,tigrfam_Cyt_c_oxidase_su2	-	no_errors	MT-CO2	HGNC	ENSG00000198712	tier1	-	-	833	0	0.00	120	1160	89.64
TMPRSS13	0	genome.wustl.edu	37	11	117774364	117774364	+	Missense_Mutation	SNP	T	T	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	11	117774364	117774364	T	A	SNP	TMPRSS13	ENST00000445164	human	ensembl	74_37	-1	known	missense	c.1683	p.R561S	0.037	pirsf_Peptidase_S1A_TMPRSS13	pirsf_Peptidase_S1A_TMPRSS13,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,superfamily_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_SRCR,pfscan_Peptidase_S1	-	no_errors	TMPRSS13	HGNC	ENSG00000137747	tier1	-	-	38	0	0.00	26	13	33.33
VIT	0	genome.wustl.edu	37	2	37036041	37036041	+	Missense_Mutation	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	2	37036041	37036041	C	T	SNP	VIT	ENST00000379242	human	ensembl	74_37	+1	known	missense	c.1816	p.P606S	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_LCCL,superfamily_LCCL,smart_LCCL,smart_VWF_A,pfscan_LCCL,pfscan_VWF_A	-	no_errors	VIT	HGNC	ENSG00000205221	tier1	-	-	22	0	0.00	25	4	13.79
TMEM132D	0	genome.wustl.edu	37	12	129566374	129566374	+	Missense_Mutation	SNP	T	T	C			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	12	129566374	129566374	T	C	SNP	TMEM132D	ENST00000422113	human	ensembl	74_37	-1	known	missense	c.1853	p.E618G	1.000	NULL	NULL	-	no_errors	TMEM132D	HGNC	ENSG00000151952	tier1	-	-	85	0	0.00	68	25	26.88
CSMD3	0	genome.wustl.edu	37	8	113275914	113275914	+	Silent	SNP	G	G	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	8	113275914	113275914	G	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	silent	c.9816	p.T3272	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	44	0	0.00	34	5	12.82
GOLGA3	0	genome.wustl.edu	37	12	133351889	133351889	+	Silent	SNP	G	G	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	12	133351889	133351889	G	A	SNP	GOLGA3	ENST00000204726	human	ensembl	74_37	-1	known	silent	c.3981	p.N1327	0.860	NULL	superfamily_Prefoldin	-	no_errors	GOLGA3	HGNC	ENSG00000090615	tier1	-	-	41	0	0.00	35	7	16.67
SPEG	0	genome.wustl.edu	37	2	220330643	220330650	+	RNA	DEL	GTGCGCGC	GTGCGCGC	-			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	GTGCGCGC	GTGCGCGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	2	220330643	220330650	GTGCGCGC	-	DEL	SPEG	ENST00000462545	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.057:0.016:0.015:0.006:0.004:0.001:0.002:0.003	-	-	-	no_errors	SPEG	HGNC	ENSG00000072195	tier1			NA	NA	NA	NA	NA	NA
DOPEY1	0	genome.wustl.edu	37	6	83839162	83839162	+	Missense_Mutation	SNP	G	G	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	6	83839162	83839162	G	T	SNP	DOPEY1	ENST00000349129	human	ensembl	74_37	+1	known	missense	c.2276	p.S759I	1.000	superfamily_ARM-type_fold	pfam_Dopey_N,superfamily_ARM-type_fold	-	no_errors	DOPEY1	HGNC	ENSG00000083097	tier1	-	-	32	0	0.00	26	3	10.34
TNXB	0	genome.wustl.edu	37	6	32029299	32029299	+	Missense_Mutation	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	6	32029299	32029299	C	T	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.7367	p.R2456H	0.935	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	tier1	-	-	92	0	0.00	62	28	31.11
FERMT1	0	genome.wustl.edu	37	20	6096537	6096537	+	Silent	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	20	6096537	6096537	C	T	SNP	FERMT1	ENST00000217289	human	ensembl	74_37	-1	known	silent	c.306	p.P102	0.242	smart_Band_41_domain	pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	FERMT1	HGNC	ENSG00000101311	tier1	rs141850118	GMAF=0.0005	46	0	0.00	26	19	42.22
SHF	0	genome.wustl.edu	37	15	45465795	45465795	+	Missense_Mutation	SNP	G	G	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	15	45465795	45465795	G	A	SNP	SHF	ENST00000290894	human	ensembl	74_37	-1	known	missense	c.772	p.P258S	1.000	NULL	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SHF	HGNC	ENSG00000138606	tier1	-	-	52	0	0.00	45	19	29.69
CDNF	0	genome.wustl.edu	37	10	14861969	14861969	+	RNA	SNP	G	G	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	10	14861969	14861969	G	A	SNP	CDNF	ENST00000378441	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CDNF	HGNC	ENSG00000185267	tier1	-	-	30	0	0.00	43	4	8.51
ZMIZ1	0	genome.wustl.edu	37	10	81056630	81056631	+	RNA	INS	-	-	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	10	81056630	81056631	-	T	INS	ZMIZ1	ENST00000478357	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	ZMIZ1	HGNC	ENSG00000108175	tier1			12	0	0.00	8	3	27.27
PTEN	0	genome.wustl.edu	37	10	89692794	89692794	+	Missense_Mutation	SNP	A	A	C			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	10	89692794	89692794	A	C	SNP	PTEN	ENST00000371953	human	ensembl	74_37	+1	known	missense	c.278	p.H93P	1.000	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Phosphatase_tensin-typ	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_dom,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862	tier1	-	-	56	0	0.00	40	20	33.33
RFX3	0	genome.wustl.edu	37	9	3257180	3257180	+	Missense_Mutation	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	9	3257180	3257180	C	T	SNP	RFX3	ENST00000382004	human	ensembl	74_37	-1	known	missense	c.1625	p.C542Y	1.000	NULL	pfam_RFX1_trans_act,pfam_DNA-bd_RFX	-	no_errors	RFX3	HGNC	ENSG00000080298	tier1	-	-	13	0	0.00	20	6	23.08
OTOL1	0	genome.wustl.edu	37	3	161221320	161221320	+	Missense_Mutation	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	3	161221320	161221320	C	T	SNP	OTOL1	ENST00000327928	human	ensembl	74_37	+1	known	missense	c.1024	p.R342W	0.013	superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_Collagen,pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	OTOL1	HGNC	ENSG00000182447	tier1	-	-	50	0	0.00	56	20	26.32
C3	0	genome.wustl.edu	37	19	6712609	6712609	+	Silent	SNP	G	G	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	19	6712609	6712609	G	A	SNP	C3	ENST00000245907	human	ensembl	74_37	-1	known	silent	c.1029	p.R343	0.001	NULL	pfam_A2M_comp,pfam_A-macroglobulin_rcpt-bd,pfam_Macroglobln_a2,pfam_Netrin_module_non-TIMP,pfam_A2M_N_2,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Anaphylatoxin/fibulin,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_TIMP-like_OB-fold,superfamily_A-macroglobulin_rcpt-bd,superfamily_Anaphylatoxin_comp_syst,smart_Anaphylatoxin/fibulin,smart_Netrin_module_non-TIMP,prints_Anaphylatoxn_comp_syst_dom,pfscan_Anaphylatoxin/fibulin,pfscan_Netrin_domain	-	no_errors	C3	HGNC	ENSG00000125730	tier1	-	-	32	0	0.00	37	4	9.76
MUC16	0	genome.wustl.edu	37	19	9062573	9062573	+	Silent	SNP	G	G	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	19	9062573	9062573	G	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.24873	p.S8291	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	24	0	0.00	32	17	34.69
ENSG00000267260	0	genome.wustl.edu	37	19	37264096	37264096	+	Missense_Mutation	SNP	C	C	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	19	37264096	37264096	C	A	SNP	ENSG00000267260	ENST00000590750	human	ensembl	74_37	+1	putative	missense	c.18	p.F6L	0.007	NULL	NULL	-	no_errors	CTD-2162K18.4	Clone_based_vega_gene	ENSG00000267260	tier1	-	-	30	0	0.00	44	16	26.67
ESPNP	0	genome.wustl.edu	37	1	17034456	17034463	+	RNA	DEL	GCGCGCGT	GCGCGCGT	-			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	GCGCGCGT	GCGCGCGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	1	17034456	17034463	GCGCGCGT	-	DEL	ESPNP	ENST00000492551	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000:0.990:0.984:0.981:0.981:0.989:0.998	-	-	-	no_errors	ESPNP	HGNC	ENSG00000268869	tier1			NA	NA	NA	NA	NA	NA
ENSG00000251273	0	genome.wustl.edu	37	5	25190635	25190635	+	RNA	SNP	G	G	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	5	25190635	25190635	G	A	SNP	ENSG00000251273	ENST00000507600	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-549K20.1	Clone_based_vega_gene	ENSG00000251273	tier1	-	-	42	0	0.00	49	33	40.24
RAD54B	0	genome.wustl.edu	37	8	95390498	95390498	+	Missense_Mutation	SNP	G	G	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	8	95390498	95390498	G	T	SNP	RAD54B	ENST00000336148	human	ensembl	74_37	-1	known	missense	c.2425	p.L809I	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_HDA_complex_subunit-2/3,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	RAD54B	HGNC	ENSG00000197275	tier1	-	-	34	0	0.00	30	4	11.76
BSN	0	genome.wustl.edu	37	3	49698840	49698840	+	Missense_Mutation	SNP	G	G	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	3	49698840	49698840	G	A	SNP	BSN	ENST00000296452	human	ensembl	74_37	+1	known	missense	c.9562	p.G3188S	1.000	NULL	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	-	no_errors	BSN	HGNC	ENSG00000164061	tier1	-	-	29	0	0.00	30	4	11.76
LOC100131825	0	genome.wustl.edu	37	1	159166613	159166613	+	RNA	DEL	T	T	-			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	1	159166613	159166613	T	-	DEL	LOC100131825	ENST00000415675	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTA-134P22.2	Clone_based_vega_gene	ENSG00000225670	tier1			15	0	0.00	18	4	18.18
HHIPL1	0	genome.wustl.edu	37	14	100123367	100123369	+	In_Frame_Del	DEL	AAA	AAA	-			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	14	100123367	100123369	AAA	-	DEL	HHIPL1	ENST00000330710	human	ensembl	74_37	+1	known	in_frame_del	c.933_935	p.N312in_frame_del	0.130:0.998:1.000	superfamily_Quinoprot_gluc/sorb_DH	pfam_SRCR,pfam_Folate_rcpt-like,pfam_Glc/Sorbosone_DH,superfamily_Srcr_rcpt-rel,superfamily_Quinoprot_gluc/sorb_DH,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	HHIPL1	HGNC	ENSG00000182218	tier1			80	0	0.00	40	19	32.20
SYNE2	0	genome.wustl.edu	37	14	64467428	64467428	+	Frame_Shift_Del	DEL	T	T	-			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	14	64467428	64467428	T	-	DEL	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	frame_shift_del	c.3629	p.N1211fs	0.777	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	tier1			37	0	0.00	11	2	15.38
RCOR1	0	genome.wustl.edu	37	14	103059661	103059661	+	Silent	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	14	103059661	103059661	C	T	SNP	RCOR1	ENST00000262241	human	ensembl	74_37	+1	known	silent	c.360	p.P120	0.983	pfam_ELM2_dom,pfscan_ELM2_dom	pfam_SANT/Myb,pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom,prints_Antifreeze_1	-	no_errors	RCOR1	HGNC	ENSG00000089902	tier1	-	-	31	0	0.00	25	4	13.79
NRAP	0	genome.wustl.edu	37	10	115423585	115423585	+	Silent	SNP	G	G	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	10	115423585	115423585	G	T	SNP	NRAP	ENST00000369358	human	ensembl	74_37	-1	known	silent	c.57	p.I19	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Nebulin_35r-motif,pfam_Znf_LIM,smart_Znf_LIM,smart_Nebulin_35r-motif,pfscan_Znf_LIM,pfscan_Nebulin_35r-motif,prints_Nebulin	-	no_errors	NRAP	HGNC	ENSG00000197893	tier1	-	-	27	0	0.00	31	4	11.43
LY75	0	genome.wustl.edu	37	2	160717368	160717368	+	Silent	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	2	160717368	160717368	C	T	SNP	LY75	ENST00000554112	human	ensembl	74_37	-1	known	silent	c.2232	p.Q744	1.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin	-	no_errors	LY75	HGNC	ENSG00000054219	tier1	-	-	32	0	0.00	24	4	14.29
ABCD3	0	genome.wustl.edu	37	1	94982776	94982777	+	RNA	INS	-	-	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	1	94982776	94982777	-	T	INS	ABCD3	ENST00000464165	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998:1.000	-	-	-	no_errors	ABCD3	HGNC	ENSG00000117528	tier1			29	0	0.00	24	3	11.11
FOXP1	0	genome.wustl.edu	37	3	71096156	71096156	+	Missense_Mutation	SNP	G	G	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	3	71096156	71096156	G	A	SNP	FOXP1	ENST00000318789	human	ensembl	74_37	-1	known	missense	c.601	p.R201C	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,prints_TF_fork_head,pfscan_TF_fork_head	-	no_errors	FOXP1	HGNC	ENSG00000114861	tier1	-	-	43	0	0.00	34	4	10.53
DYNC1H1	0	genome.wustl.edu	37	14	102483133	102483133	+	Nonsense_Mutation	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	14	102483133	102483133	C	T	SNP	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	nonsense	c.7645	p.Q2549*	1.000	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102	tier1	-	-	28	0	0.00	26	4	13.33
EIF4A2	0	genome.wustl.edu	37	3	186506919	186506919	+	Missense_Mutation	SNP	G	G	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	3	186506919	186506919	G	A	SNP	EIF4A2	ENST00000440191	human	ensembl	74_37	+1	known	missense	c.1088	p.G363D	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	EIF4A2	HGNC	ENSG00000156976	tier1	-	-	29	0	0.00	30	4	11.76
DDC	0	genome.wustl.edu	37	7	50531032	50531032	+	Missense_Mutation	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	7	50531032	50531032	C	T	SNP	DDC	ENST00000357936	human	ensembl	74_37	-1	known	missense	c.1340	p.R447H	0.998	superfamily_PyrdxlP-dep_Trfase	pfam_PyrdxlP-dep_de-COase,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase,prints_Aromatic_deC	-	no_errors	DDC	HGNC	ENSG00000132437	tier1	-	-	38	0	0.00	24	15	37.50
CKAP2	0	genome.wustl.edu	37	13	53036665	53036665	+	Missense_Mutation	SNP	A	A	G			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	13	53036665	53036665	A	G	SNP	CKAP2	ENST00000378037	human	ensembl	74_37	+1	known	missense	c.1271	p.N424S	0.994	NULL	NULL	-	no_errors	CKAP2	HGNC	ENSG00000136108	tier1	-	-	26	0	0.00	34	4	10.53
TTN	0	genome.wustl.edu	37	2	179417021	179417021	+	Silent	SNP	G	G	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	2	179417021	179417021	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.82902	p.Y27634	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	36	0	0.00	24	3	11.11
ZNF213	0	genome.wustl.edu	37	16	3191240	3191240	+	Silent	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	16	3191240	3191240	C	T	SNP	ZNF213	ENST00000396878	human	ensembl	74_37	+1	known	silent	c.1272	p.T424	0.123	pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF213	HGNC	ENSG00000085644	tier1	-	-	42	0	0.00	27	14	34.15
ADCK5	0	genome.wustl.edu	37	8	145617535	145617549	+	Frame_Shift_Del	DEL	GGGGGTGCAAGGTGA	GGGGGTGCAAGGTGA	-			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	GGGGGTGCAAGGTGA	GGGGGTGCAAGGTGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	8	145617535	145617549	GGGGGTGCAAGGTGA	-	DEL	ADCK5	ENST00000308860	human	ensembl	74_37	+1	known	frame_shift_del	c.1257_1267	p.G420fs	0.999:0.998:1.000:0.999:1.000:1.000:1.000:1.000:1.000:1.000:1.000	NULL	pfam_UbiB_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK5	HGNC	ENSG00000173137	tier1			NA	NA	NA	NA	NA	NA
USP8	0	genome.wustl.edu	37	15	50784955	50784955	+	Missense_Mutation	SNP	C	C	A			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	15	50784955	50784955	C	A	SNP	USP8	ENST00000307179	human	ensembl	74_37	+1	known	missense	c.2292	p.N764K	1.000	NULL	pfam_Peptidase_C19/C67,pfam_USP8_dimer,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,superfamily_WW_dom,pfscan_Rhodanese-like_dom,pfscan_Peptidase_C19/C67	-	no_errors	USP8	HGNC	ENSG00000138592	tier1	rs74840283	-	39	0	0.00	44	10	18.52
CUL9	0	genome.wustl.edu	37	6	43154707	43154707	+	Nonsense_Mutation	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	6	43154707	43154707	C	T	SNP	CUL9	ENST00000252050	human	ensembl	74_37	+1	known	nonsense	c.1261	p.Q421*	1.000	pfam_CPH_domain	pfam_Cullin_N,pfam_CPH_domain,pfam_Znf_C6HC,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,superfamily_UBA-like,smart_Cullin_neddylation_domain,smart_Znf_C6HC,pfscan_Znf_RING,pfscan_Cullin_homology	-	no_errors	CUL9	HGNC	ENSG00000112659	tier1	-	-	35	0	0.00	43	4	8.51
USP8	0	genome.wustl.edu	37	15	50784950	50784950	+	Missense_Mutation	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	15	50784950	50784950	C	T	SNP	USP8	ENST00000307179	human	ensembl	74_37	+1	known	missense	c.2287	p.R763W	1.000	NULL	pfam_Peptidase_C19/C67,pfam_USP8_dimer,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,superfamily_WW_dom,pfscan_Rhodanese-like_dom,pfscan_Peptidase_C19/C67	-	no_errors	USP8	HGNC	ENSG00000138592	tier1	rs78143971	-	37	0	0.00	42	8	16.00
GJA4	0	genome.wustl.edu	37	1	35259912	35259912	+	Missense_Mutation	SNP	G	G	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	1	35259912	35259912	G	T	SNP	GJA4	ENST00000342280	human	ensembl	74_37	+1	known	missense	c.98	p.R33L	1.000	pfam_Connexin_N,prints_Connexin	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin37	-	no_errors	GJA4	HGNC	ENSG00000187513	tier1	-	-	25	0	0.00	32	4	11.11
SCAP	0	genome.wustl.edu	37	3	47462189	47462189	+	Missense_Mutation	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	3	47462189	47462189	C	T	SNP	SCAP	ENST00000265565	human	ensembl	74_37	-1	known	missense	c.1418	p.R473H	0.998	NULL	pfam_Patched,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_SSD,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SCAP	HGNC	ENSG00000114650	tier1	-	-	80	0	0.00	84	36	30.00
RPSAP52	0	genome.wustl.edu	37	12	66152073	66152073	+	RNA	SNP	C	C	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	12	66152073	66152073	C	T	SNP	RPSAP52	ENST00000489520	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPSAP52	HGNC	ENSG00000241749	tier1	-	-	35	0	0.00	41	4	8.89
ZNF264	0	genome.wustl.edu	37	19	57724348	57724348	+	Nonstop_Mutation	SNP	G	G	T			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	19	57724348	57724348	G	T	SNP	ZNF264	ENST00000263095	human	ensembl	74_37	+1	known	nonstop	c.1883	p.*628L	0.982	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF264	HGNC	ENSG00000083844	tier1	-	-	35	0	0.00	33	4	10.81
HNRNPA2B1	0	genome.wustl.edu	37	7	26230766	26230766	+	RNA	DEL	A	A	-			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	7	26230766	26230766	A	-	DEL	HNRNPA2B1	ENST00000476233	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HNRNPA2B1	HGNC	ENSG00000122566	tier1			29	0	0.00	29	3	9.38
SYNE2	0	genome.wustl.edu	37	14	64492098	64492098	+	Frame_Shift_Del	DEL	G	G	-			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	14	64492098	64492098	G	-	DEL	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	frame_shift_del	c.6211	p.E2071fs	1.000	smart_Spectrin/alpha-actinin	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	tier1			38	0	0.00	36	13	26.53
FAM107B	0	genome.wustl.edu	37	10	14709678	14709678	+	Missense_Mutation	SNP	G	G	C			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	10	14709678	14709678	G	C	SNP	FAM107B	ENST00000181796	human	ensembl	74_37	-1	known	missense	c.424	p.R142G	0.237	NULL	pfam_DUF1151	-	no_errors	FAM107B	HGNC	ENSG00000065809	tier1	-	-	50	0	0.00	41	16	28.07
LILRB1	0	genome.wustl.edu	37	19	55144554	55144554	+	Missense_Mutation	SNP	A	A	G			TCGA-Z4-A9VC-01A-11D-A37C-09	TCGA-Z4-A9VC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	99b14c9a-4edc-48af-bbaa-5998a4725e0e	230cc662-a4c6-4af8-9952-07e99321c0ee	19	55144554	55144554	A	G	SNP	LILRB1	ENST00000324602	human	ensembl	74_37	+1	known	missense	c.1046	p.Q349R	0.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB1	HGNC	ENSG00000104972	tier1	-	-	64	0	0.00	49	25	33.78
