Redactions
2015_11_01 Data Snapshot
For TCGA data, redaction is the removal of cases from the data prior to publication or release. Redacted cases are generally rare, but cases must be redacted when the TSS/BCR subject link is incorrect ("unknown patient identity"), or in the case of genotype mismatch, completely wrong cancer, or completely wrong organ/tissue. Redaction occurs regardless of a case's analyte characterization or DCC data deposition status.
Rescission is the removal of samples from the list of redactions. This happens if the reason for redaction is eventually cleared up. For clarity, rescinded redactions do not appear in this report.
Table 1. Get Full Table
| Barcode | UUID | Date | Type | Category | Notes |
|---|---|---|---|---|---|
| TCGA-BR-4186 | 65834878-0e8d-4741-9e4c-2316105ad40d | 03/20/2012 | STAD | Subject identity unknown | NA |
| TCGA-BR-4186 | 65834878-0e8d-4741-9e4c-2316105ad40d | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4190 | 282e979d-4ad9-4d42-8ffa-7487a94fa1f3 | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4194 | 2c650fe1-48b0-4f88-bc11-04096be48571 | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4195 | 7917234c-63be-4320-b7af-535381f99d99 | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4196 | c23e0eb6-e332-4a3b-9ffd-0d8f019f8ace | 11/18/2011 | STAD | Duplicate case | Duplicate subject (with 4197) per Roy (redact) Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4197 | 4a27cbb6-754f-4a8d-8606-71af35d97279 | 11/18/2011 | STAD | Duplicate case | Duplicate subject (with 4196) per Roy (redact) Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4199 | a73a0dc5-ac20-466b-ad11-d5cbbe9af2f7 | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4200 | b137efb4-35ca-4133-a2f6-490a684caa43 | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4205 | 65f14f48-13d8-4791-9335-92bb1599eb20 | 06/17/2011 | STAD | Duplicate case | Case is duplicate of TCGA-BR-4282. per Kenna on the 6/15/2011 Joint BCR call, redact both cases Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4259 | 8430ea74-3ce9-4d7d-932c-e313f0069948 | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4260 | 4d26fcfe-4bed-4245-b30a-a95b48785fd9 | 11/18/2011 | STAD | Duplicate case | Duplicate subject (with 4263) per Roy (redact) Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4261 | 5bd9831b-a70a-4519-823f-0580bc5c0c76 | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4263 | 826ae72b-aa6f-44ae-b683-83f6e8f708e6 | 11/18/2011 | STAD | Duplicate case | Duplicate subject (with 4260) per Roy (redact) Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4264 | c036069a-a217-433b-a5b7-f5826ddbd7fa | 11/18/2011 | STAD | Duplicate case | Duplicate subject (with 4266) per Roy (redact) Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4265 | 6e0e2a1f-bfc3-461a-8f66-fb74e6999785 | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4266 | 8d62ca4c-deca-46d3-8c97-c14ce34e1bf4 | 11/18/2011 | STAD | Duplicate case | Duplicate subject (with 4264) per Roy (redact) Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4270 | 6d174bec-9574-42f1-b153-706d389aa36d | 11/18/2011 | STAD | Duplicate case | Duplicate subject (with 4271) per Roy (redact) Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4271 | f9c581e5-7556-429f-81bd-373ede868f9c | 11/18/2011 | STAD | Duplicate case | Duplicate subject (with 4270) per Roy (redact) Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4272 | 2e333a4c-9f9c-4bac-8451-95f1d84715c1 | 11/18/2011 | STAD | Duplicate case | Duplicate subject (with 4273) per Roy (redact) Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4273 | 7cb06aa4-a199-4076-85c7-e30dc6adccdc | 11/18/2011 | STAD | Duplicate case | Duplicate subject (with 4272) per Roy (redact) Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4274 | 684f9ddb-6820-4a46-a122-d4465c8ad3bd | 11/18/2011 | STAD | Duplicate case | Duplicate subject (with 4276) per Roy (redact) Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4276 | cfe21d5f-c885-4907-b0ef-2420a91d8d30 | 11/18/2011 | STAD | Duplicate case | Duplicate subject (with 4274) per Roy (redact) Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4277 | 9be0c7cd-1747-4d04-91ff-8021ffc240a9 | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4278 | cd83d7f5-4f30-4ac8-b3b8-f48577aae356 | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4281 | 5a2b30ea-e180-4228-b961-546828b50dcf | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4282 | f404c64a-8b6e-4799-9a24-0ce9f7afe3d9 | 06/17/2011 | STAD | Duplicate case | Case is duplicate of TCGA-BR-4205. per Kenna on the 6/15/2011 Joint BCR call, redact both cases Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4283 | c55eee70-2967-4754-aabd-534bada30a3a | 03/20/2012 | STAD | Subject identity unknown | Gender mismatch between clinical and genomic data. Site unable to provide/confirm correct data. |
| TCGA-BR-4283 | c55eee70-2967-4754-aabd-534bada30a3a | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4284 | 44486f21-3cea-4ced-a7f9-e2cb54129e21 | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4285 | 649bbb1c-0997-4b69-bb17-c327c558fe7f | 11/18/2011 | STAD | Duplicate case | Duplicate subject (with 4286) per Roy (redact) Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4286 | 966eed09-6f55-45df-8e51-523442e85fa4 | 11/18/2011 | STAD | Duplicate case | Duplicate subject (with 4285) per Roy (redact) Both cases are redacted because TSS submitted conflicting patient data and BCR is not able to disambiguate. |
| TCGA-BR-4288 | 61d713f9-7763-4c17-9ca9-f5919cd2fb50 | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4291 | e4fee394-e1e2-4e67-8940-e7471e6c0bd8 | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4298 | 82c45707-2d84-4209-9376-76c2a67a7fbb | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4375 | 85b38301-c8b1-4d41-bc8f-3ac5e70287b8 | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-BR-4376 | ea5fc9b4-cafe-4649-b024-b33f904e2e3e | 11/08/2012 | STAD | Subject identity unknown | Site found that there was duplicate tissue in their biobank with another ID and different clinical data than that sent to TCGA. Case is being redacted but may be salvaged if the site can reconsile the correct clinical data to the tissue. |
| TCGA-VQ-A8PS-01A-11R | 51e453b3-4bc5-4057-ac6d-fec54f1323c4 | 06/10/2015 | STAD | Genotype mismatch | The RNA associated with UUID 51E453B3-4BC5-4057-AC6D-FEC54F1323C4 was involved in an extraction error that resulted in a genotype mismatch with its corresponding tumor DNA. This only affected the tumor RNA as DNA from the tumor and normal sample have the correct matching genotype. |
| TCGA-VQ-A8PS-01A-11R-A414-31 | 69c56313-2ebb-4a0a-85e0-93c3ef575c1f | 06/10/2015 | STAD | Genotype mismatch | The RNA associated with UUID 69C56313-2EBB-4A0A-85E0-93C3EF575C1F was involved in an extraction error that resulted in a genotype mismatch with its corresponding tumor DNA. This only affected the tumor RNA as DNA from the tumor and normal sample have the correct matching genotype. |
| TCGA-VQ-A8PS-01A-11R-A415-13 | 1f04b546-40eb-49f3-8faf-91f470e86a4f | 06/10/2015 | STAD | Genotype mismatch | The RNA associated with UUID 1F04B546-40EB-49F3-8FAF-91F470E86A4F was involved in an extraction error that resulted in a genotype mismatch with its corresponding tumor DNA. This only affected the tumor RNA as DNA from the tumor and normal sample have the correct matching genotype. |
| TCGA-VQ-A8PT-01A-11R | 7740c28b-d60a-4304-ae33-38764ffdb984 | 06/10/2015 | STAD | Genotype mismatch | The RNA associated with UUID 7740C28B-D60A-4304-AE33-38764FFDB984 was involved in an extraction error that resulted in a genotype mismatch with its corresponding tumor DNA. This only affected the tumor RNA as DNA from the tumor and normal sample have the correct matching genotype. |
| TCGA-VQ-A8PT-01A-11R-A414-31 | 2071203c-0a8d-4082-8f83-903719413e1c | 06/10/2015 | STAD | Genotype mismatch | The RNA associated with UUID 2071203C-0A8D-4082-8F83-903719413E1C was involved in an extraction error that resulted in a genotype mismatch with its corresponding tumor DNA. This only affected the tumor RNA as DNA from the tumor and normal sample have the correct matching genotype. |
| TCGA-VQ-A8PT-01A-11R-A415-13 | bb0571d3-d4d5-4690-9b93-bb380af6bd8e | 06/10/2015 | STAD | Genotype mismatch | The RNA associated with UUID BB0571D3-D4D5-4690-9B93-BB380AF6BD8E was involved in an extraction error that resulted in a genotype mismatch with its corresponding tumor DNA. This only affected the tumor RNA as DNA from the tumor and normal sample have the correct matching genotype. |
| TCGA-VQ-A8PY-01A-11R | 44c0ac01-f951-49b8-a399-8d993b0a59e5 | 06/10/2015 | STAD | Genotype mismatch | The RNA associated with UUID 44C0AC01-F951-49B8-A399-8D993B0A59E5 was involved in an extraction error that resulted in a genotype mismatch with its corresponding tumor DNA. This only affected the tumor RNA as DNA from the tumor and normal sample have the correct matching genotype. |
| TCGA-VQ-A8PY-01A-11R-A414-31 | e51e938f-91c3-426e-bf55-f680b63b0144 | 06/10/2015 | STAD | Genotype mismatch | The RNA associated with UUID E51E938F-91C3-426E-BF55-F680B63B0144 was involved in an extraction error that resulted in a genotype mismatch with its corresponding tumor DNA. This only affected the tumor RNA as DNA from the tumor and normal sample have the correct matching genotype. |
| TCGA-VQ-A8PY-01A-11R-A415-13 | 0a0bfc7c-fd21-4211-a4a0-72a200a1c35e | 06/10/2015 | STAD | Genotype mismatch | The RNA associated with UUID 0A0BFC7C-FD21-4211-A4A0-72A200A1C35E was involved in an extraction error that resulted in a genotype mismatch with its corresponding tumor DNA. This only affected the tumor RNA as DNA from the tumor and normal sample have the correct matching genotype. |
| TCGA-VQ-A8PZ-01A-11R | d67ed0a1-3738-4756-b8f2-5db1902488d6 | 06/10/2015 | STAD | Genotype mismatch | The RNA associated with UUID D67ED0A1-3738-4756-B8F2-5DB1902488D6 was involved in an extraction error that resulted in a genotype mismatch with its corresponding tumor DNA. This only affected the tumor RNA as DNA from the tumor and normal sample have the correct matching genotype. |
| TCGA-VQ-A8PZ-01A-11R-A414-31 | 47f4b7a3-a85d-4500-ad6a-50aa8ddb0344 | 06/10/2015 | STAD | Genotype mismatch | The RNA associated with UUID 47F4B7A3-A85D-4500-AD6A-50AA8DDB0344 was involved in an extraction error that resulted in a genotype mismatch with its corresponding tumor DNA. This only affected the tumor RNA as DNA from the tumor and normal sample have the correct matching genotype. |
| TCGA-VQ-A8PZ-01A-11R-A415-13 | 52d0dbff-82b3-4aed-8b6c-da964d492253 | 06/10/2015 | STAD | Genotype mismatch | The RNA associated with UUID 52D0DBFF-82B3-4AED-8B6C-DA964D492253 was involved in an extraction error that resulted in a genotype mismatch with its corresponding tumor DNA. This only affected the tumor RNA as DNA from the tumor and normal sample have the correct matching genotype. |