Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABI3BP	0	genome.wustl.edu	37	3	100595366	100595366	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	3	100595366	100595366	G	T	SNP	ABI3BP	ENST00000483129	human	ensembl	69_37n	-1	novel	missense	c.82	p.H28N	0.999	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ABI3BP	HGNC	ENSG00000154175	185	0	0.00	250	125	32.98	-	-	-
ADAMTS9	0	genome.wustl.edu	37	3	64587686	64587686	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	3	64587686	64587686	C	T	SNP	ADAMTS9	ENST00000481060	human	ensembl	69_37n	-1	known	missense	c.1118	p.G373E	0.262	NULL	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ADAMTS9	HGNC	ENSG00000163638	108	0	0.00	103	19	15.57	-	-	-
ADCY1	0	genome.wustl.edu	37	7	45717647	45717647	+	Silent	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	7	45717647	45717647	C	T	SNP	ADCY1	ENST00000297323	human	ensembl	69_37n	+1	known	silent	c.1785	p.V595	0.000	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY1	HGNC	ENSG00000164742	103	0	0.00	75	34	30.63	-	-	-
AP1G1	0	genome.wustl.edu	37	16	71792720	71792720	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	16	71792720	71792720	G	A	SNP	AP1G1	ENST00000433195	human	ensembl	69_37n	-1	known	missense	c.1148	p.S383L	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP1_complex_gsu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/clathrin_app_Ig-like,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP1_complex_gsu,pfscan_Clathrin_g-adaptin_app	-	no_errors	AP1G1	HGNC	ENSG00000166747	113	0	0.00	88	16	15.24	-	-	-
C1orf61	0	genome.wustl.edu	37	1	156389981	156389982	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	1	156389981	156389982	-	G	INS	C1orf61	ENST00000368242	human	ensembl	69_37n	-1	known	frame_shift_ins	c.148_147	p.S49fs	0.000:0.000	NULL	NULL	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region	C1orf61	HGNC	ENSG00000125462	28	0	0.00	21	3	12.50	-	-	-
C3orf52	0	genome.wustl.edu	37	3	111821786	111821786	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	3	111821786	111821786	G	A	SNP	C3orf52	ENST00000431717	human	ensembl	69_37n	+1	known	missense	c.370	p.E124K	0.512	NULL	NULL	-	no_errors	C3orf52	HGNC	ENSG00000114529	81	0	0.00	112	15	11.72	-	-	-
CACUL1	0	genome.wustl.edu	37	10	120450820	120450820	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	10	120450820	120450820	C	T	SNP	CACUL1	ENST00000369151	human	ensembl	69_37n	-1	known	missense	c.982	p.D328N	1.000	NULL	pfam_Cullin_N,superfamily_Cullin_repeat-like_dom	-	no_errors	CACUL1	HGNC	ENSG00000151893	59	0	0.00	65	19	22.62	-	-	-
CASP8	0	genome.wustl.edu	37	2	202137448	202137448	+	Missense_Mutation	SNP	A	A	C			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	2	202137448	202137448	A	C	SNP	CASP8	ENST00000358485	human	ensembl	69_37n	+1	known	missense	c.676	p.I226L	0.000	pfam_DED,superfamily_DEATH-like,smart_DED,pfscan_DED	pfam_DED,pfam_Pept_C14_cat,superfamily_DEATH-like,smart_DED,smart_Pept_C14_p45_core,pfscan_DED,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14_p45_core	-	no_errors	CASP8	HGNC	ENSG00000064012	213	0	0.00	223	35	13.46	-	-	-
CCNG2	0	genome.wustl.edu	37	4	78080581	78080581	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	4	78080581	78080581	C	T	SNP	CCNG2	ENST00000316355	human	ensembl	69_37n	+1	known	missense	c.200	p.A67V	1.000	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNG2	HGNC	ENSG00000138764	146	0	0.00	116	30	20.27	-	-	-
CLASP1	0	genome.wustl.edu	37	2	122161955	122161955	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	2	122161955	122161955	G	A	SNP	CLASP1	ENST00000263710	human	ensembl	69_37n	-1	known	missense	c.2725	p.H909Y	1.000	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP1	HGNC	ENSG00000074054	173	0	0.00	233	41	14.86	-	-	-
CLEC16A	0	genome.wustl.edu	37	16	11137916	11137916	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	16	11137916	11137916	G	A	SNP	CLEC16A	ENST00000409790	human	ensembl	69_37n	+1	known	missense	c.1802	p.R601Q	0.951	NULL	pfam_Uncharacterised_FPL	-	no_errors	CLEC16A	HGNC	ENSG00000038532	100	0	0.00	83	16	16.16	-	-	-
CLEC6A	0	genome.wustl.edu	37	12	8618227	8618227	+	Splice_Site	SNP	T	T	C			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	12	8618227	8618227	T	C	SNP	CLEC6A	ENST00000382073	human	ensembl	69_37n	+1	known	splice_site	c.369+2	e4+2	0.946	-	-	-	no_errors	CLEC6A	HGNC	ENSG00000205846	99	0	0.00	74	25	25.25	-	-	-
CRX	0	genome.wustl.edu	37	19	48343000	48343000	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	19	48343000	48343000	G	A	SNP	CRX	ENST00000221996	human	ensembl	69_37n	+1	known	missense	c.676	p.V226M	1.000	pfam_Otx_TF_C	pfam_Homeodomain,pfam_Otx_TF_C,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	CRX	HGNC	ENSG00000105392	113	0	0.00	129	22	14.57	-	-	-
DCLRE1C	0	genome.wustl.edu	37	10	14951002	14951002	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	10	14951002	14951002	C	G	SNP	DCLRE1C	ENST00000378278	human	ensembl	69_37n	-1	known	missense	c.1484	p.R495T	0.140	NULL	pfam_DRMBL	-	no_errors	DCLRE1C	HGNC	ENSG00000152457	108	0	0.00	97	36	26.28	-	-	-
DGKG	0	genome.wustl.edu	37	3	185986615	185986615	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	3	185986615	185986615	C	T	SNP	DGKG	ENST00000265022	human	ensembl	69_37n	-1	known	missense	c.1091	p.R364Q	1.000	smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_Ca-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_HAND_2,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKG	HGNC	ENSG00000058866	106	0	0.00	43	57	57.00	-	-	-
DPYS	0	genome.wustl.edu	37	8	105479017	105479018	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	8	105479017	105479018	-	C	INS	DPYS	ENST00000351513	human	ensembl	69_37n	-1	known	frame_shift_ins	c.132_131	p.A45fs	0.000:0.000	superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYS	HGNC	ENSG00000147647	19	0	0.00	12	2	14.29	-	-	-
ESAM	0	genome.wustl.edu	37	11	124626494	124626494	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	11	124626494	124626494	C	T	SNP	ESAM	ENST00000278927	human	ensembl	69_37n	-1	known	missense	c.394	p.D132N	0.006	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	ESAM	HGNC	ENSG00000149564	82	0	0.00	38	9	19.15	-	-	-
FAM176C	0	genome.wustl.edu	37	21	33873789	33873789	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	21	33873789	33873789	G	C	SNP	FAM176C	ENST00000300255	human	ensembl	69_37n	+1	known	missense	c.843	p.Q281H	1.000	NULL	pfam_Lectin_gal-bd_dom,pfscan_Lectin_gal-bd_dom	-	no_errors	FAM176C	HGNC	ENSG00000166979	161	0	0.00	188	33	14.67	-	-	-
FARP2	0	genome.wustl.edu	37	2	242396201	242396201	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	2	242396201	242396201	G	A	SNP	FARP2	ENST00000264042	human	ensembl	69_37n	+1	known	missense	c.1451	p.R484Q	0.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_FERM-adjacent,superfamily_DH-domain,superfamily_FERM_central,smart_Band_41_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_FERM_domain,pfscan_Pleckstrin_homology,pfscan_DH-domain,prints_Band_41_fam,prints_Ez/rad/moesin	-	no_errors	FARP2	HGNC	ENSG00000006607	37	0	0.00	30	7	17.95	-	-	-
FCGBP	0	genome.wustl.edu	37	19	40368696	40368696	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	19	40368696	40368696	C	T	SNP	FCGBP	ENST00000221347	human	ensembl	69_37n	-1	known	missense	c.12652	p.G4218S	1.000	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EGF-like,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920	296	0	0.00	193	44	18.26	-	-	-
GIMAP7	0	genome.wustl.edu	37	7	150217906	150217906	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	7	150217906	150217906	A	G	SNP	GIMAP7	ENST00000313543	human	ensembl	69_37n	+1	known	missense	c.844	p.K282E	0.000	NULL	pfam_AIG1	-	no_errors	GIMAP7	HGNC	ENSG00000179144	26	0	0.00	60	12	16.44	-	-	-
GTPBP1	0	genome.wustl.edu	37	22	39122087	39122088	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	22	39122087	39122088	-	C	INS	GTPBP1	ENST00000216044	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1150_1151	p.R386fs	1.000:1.000	NULL	pfam_ProtSyn_GTP-bd,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_elong_init/rib_B-barrel	-	no_errors	GTPBP1	HGNC	ENSG00000100226	142	0	0.00	61	7	10.29	-	-	-
GYLTL1B	0	genome.wustl.edu	37	11	45948372	45948373	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	11	45948372	45948373	-	C	INS	GYLTL1B	ENST00000325468	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1275_1276	p.R427fs	0.002:0.023	NULL	pfam_Glyco_trans_8	-	no_errors	GYLTL1B	HGNC	ENSG00000165905	25	0	0.00	11	4	26.67	-	-	-
HABP4	0	genome.wustl.edu	37	9	99228042	99228042	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	9	99228042	99228042	G	A	SNP	HABP4	ENST00000375249	human	ensembl	69_37n	+1	known	missense	c.725	p.G242E	0.963	pfam_HABP4_PAIRBP1-bd	pfam_HABP4_PAIRBP1-bd	-	no_errors	HABP4	HGNC	ENSG00000130956	816	1	0.12	476	105	17.95	-	-	-
HOXC4	0	genome.wustl.edu	37	12	54448689	54448689	+	Silent	SNP	G	G	C			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	12	54448689	54448689	G	C	SNP	HOXC4	ENST00000303406	human	ensembl	69_37n	+1	known	silent	c.495	p.R165	1.000	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_antennapedia	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXC4	HGNC	ENSG00000198353	33	0	0.00	47	8	14.04	-	-	-
HSPA8	0	genome.wustl.edu	37	11	122930605	122930605	+	Missense_Mutation	SNP	A	A	C			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	11	122930605	122930605	A	C	SNP	HSPA8	ENST00000534624	human	ensembl	69_37n	-1	known	missense	c.696	p.D232E	0.997	pfam_Hsp_70_fam,pfam_MreB_Mrl	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA8	HGNC	ENSG00000109971	80	0	0.00	51	7	12.07	-	-	-
HYLS1	0	genome.wustl.edu	37	11	125769927	125769927	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	11	125769927	125769927	G	A	SNP	HYLS1	ENST00000356438	human	ensembl	69_37n	+1	known	missense	c.664	p.D222N	1.000	NULL	NULL	-	no_errors	HYLS1	HGNC	ENSG00000198331	91	0	0.00	71	24	25.00	-	-	-
ITGB4	0	genome.wustl.edu	37	17	73723581	73723581	+	Frame_Shift_Del	DEL	A	A	-			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	17	73723581	73723581	A	-	DEL	ITGB4	ENST00000200181	human	ensembl	69_37n	+1	known	frame_shift_del	c.259	p.T87fs	0.001	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_N,smart_Integrin_bsu_N	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_N,pfam_Fibronectin_type3,pfam_Calx_beta,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Fibronectin_type3,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like,smart_Integrin_bsu_N,smart_Calx_beta,smart_Fibronectin_type3,pfscan_Fibronectin_type3,prints_Integrin_bsu	-	no_errors	ITGB4	HGNC	ENSG00000132470	44	0	0.00	23	58	69.88	-	-	-
LRPPRC	0	genome.wustl.edu	37	2	44174410	44174410	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	2	44174410	44174410	G	A	SNP	LRPPRC	ENST00000260665	human	ensembl	69_37n	-1	known	missense	c.2065	p.L689F	0.948	NULL	pfam_Pentatricopeptide_repeat,tigrfam_Pentatricopeptide_repeat	-	no_errors	LRPPRC	HGNC	ENSG00000138095	149	0	0.00	213	41	16.08	-	-	-
MYO10	0	genome.wustl.edu	37	5	16666900	16666900	+	Silent	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	5	16666900	16666900	C	T	SNP	MYO10	ENST00000513610	human	ensembl	69_37n	-1	known	silent	c.6078	p.V2026	1.000	pfscan_FERM_domain	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_Pleckstrin_homology,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_Ras-assoc,superfamily_FERM_central,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology,prints_Myosin_head_motor_dom	-	no_errors	MYO10	HGNC	ENSG00000145555	71	0	0.00	59	14	18.92	-	-	-
NAP1L3	0	genome.wustl.edu	37	X	92927934	92927934	+	Silent	SNP	G	G	A			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	X	92927934	92927934	G	A	SNP	NAP1L3	ENST00000373079	human	ensembl	69_37n	-1	known	silent	c.370	p.L124	0.000	pfam_NAP_family	pfam_NAP_family	-	no_errors	NAP1L3	HGNC	ENSG00000186310	45	0	0.00	33	4	10.81	-	-	-
NCOR1	0	genome.wustl.edu	37	17	16024444	16024444	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	17	16024444	16024444	C	A	SNP	NCOR1	ENST00000268712	human	ensembl	69_37n	-1	known	nonsense	c.1774	p.E592*	1.000	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR1	HGNC	ENSG00000141027	68	0	0.00	35	36	50.00	-	-	-
NEB	0	genome.wustl.edu	37	2	152394411	152394411	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	2	152394411	152394411	C	T	SNP	NEB	ENST00000397345	human	ensembl	69_37n	-1	known	missense	c.21077	p.R7026Q	1.000	pfam_Nebulin_35r-motif,smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom_bac,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,prints_Nebulin,pfscan_Nebulin_35r-motif,pfscan_SH3_domain	-	no_errors	NEB	HGNC	ENSG00000183091	199	1	0.50	148	34	18.28	-	-	-
OGDH	0	genome.wustl.edu	37	7	44747227	44747228	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	7	44747227	44747228	-	C	INS	OGDH	ENST00000222673	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2843_2844	p.N950fs	1.000:1.000	pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_DH_E1,pfam_Transketolase-like_Pyr-bd,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	OGDH	HGNC	ENSG00000105953	50	0	0.00	41	6	12.77	-	-	-
OR2L13	0	genome.wustl.edu	37	1	248263384	248263384	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	1	248263384	248263384	C	G	SNP	OR2L13	ENST00000358120	human	ensembl	69_37n	+1	known	missense	c.707	p.A236G	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR2L13	HGNC	ENSG00000196071	198	0	0.00	287	36	11.04	-	-	-
OR6A2	0	genome.wustl.edu	37	11	6816119	6816119	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	11	6816119	6816119	T	C	SNP	OR6A2	ENST00000332601	human	ensembl	69_37n	-1	known	missense	c.821	p.D274G	0.996	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR6A2	HGNC	ENSG00000184933	104	0	0.00	107	26	19.55	-	-	-
OR6C76	0	genome.wustl.edu	37	12	55820958	55820959	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	12	55820958	55820959	-	A	INS	OR6C76	ENST00000328314	human	ensembl	69_37n	+1	known	frame_shift_ins	c.921_922	p.K311fs	0.003:0.016	NULL	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR6C76	HGNC	ENSG00000185821	12	0	0.00	20	3	13.04	-	-	-
OR6C76	0	genome.wustl.edu	37	12	55820959	55820959	+	Frame_Shift_Del	DEL	A	A	-			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	12	55820959	55820959	A	-	DEL	OR6C76	ENST00000328314	human	ensembl	69_37n	+1	known	frame_shift_del	c.922	p.K311fs	0.016	NULL	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR6C76	HGNC	ENSG00000185821	12	0	0.00	11	7	33.33	-	-	-
PCDHGA1	0	genome.wustl.edu	37	5	140711927	140711927	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	5	140711927	140711927	C	T	SNP	PCDHGA1	ENST00000517417	human	ensembl	69_37n	+1	known	missense	c.1676	p.A559V	0.077	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA1	HGNC	ENSG00000204956	39	0	0.00	51	19	26.76	-	-	-
PCP2	0	genome.wustl.edu	37	19	7696695	7696695	+	Splice_Site	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	19	7696695	7696695	C	T	SNP	PCP2	ENST00000311069	human	ensembl	69_37n	-1	known	splice_site	c.292-1	e4-1	0.999	-	-	-	no_errors	PCP2	HGNC	ENSG00000174788	71	0	0.00	55	17	23.61	-	-	-
PIH1D1	0	genome.wustl.edu	37	19	49949895	49949896	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	19	49949895	49949896	-	C	INS	PIH1D1	ENST00000262265	human	ensembl	69_37n	-1	known	frame_shift_ins	c.744_743	p.Q250fs	0.990:0.994	NULL	NULL	-	no_errors	PIH1D1	HGNC	ENSG00000104872	45	0	0.00	35	4	10.26	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178928219	178928220	+	In_Frame_Ins	INS	-	-	ATA			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	3	178928219	178928220	-	ATA	INS	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	in_frame_ins	c.1405_1406	p.E469in_frame_insDK	1.000:1.000	pfam_PI3K_C2_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	65	0	0.00	94	21	18.26	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	66	0	0.00	57	83	57.64	-	-	-
PLXNA2	0	genome.wustl.edu	37	1	208391175	208391176	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	1	208391175	208391176	-	G	INS	PLXNA2	ENST00000367033	human	ensembl	69_37n	-1	known	frame_shift_ins	c.93_92	p.A32fs	0.000:0.000	pfscan_Semaphorin/CD100_Ag	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semaphorin/CD100_Ag,pfam_IPT_TIG_rcpt,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_IPT_TIG_rcpt,pfscan_Semaphorin/CD100_Ag	-	no_errors	PLXNA2	HGNC	ENSG00000076356	33	0	0.00	46	7	13.21	-	-	-
RSF1	0	genome.wustl.edu	37	11	77412285	77412285	+	Missense_Mutation	SNP	T	T	G			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	11	77412285	77412285	T	G	SNP	RSF1	ENST00000308488	human	ensembl	69_37n	-1	known	missense	c.1989	p.K663N	0.002	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	RSF1	HGNC	ENSG00000048649	93	0	0.00	92	22	19.30	-	-	-
SF3B1	0	genome.wustl.edu	37	2	198266834	198266834	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	2	198266834	198266834	T	C	SNP	SF3B1	ENST00000335508	human	ensembl	69_37n	-1	known	missense	c.2098	p.K700E	1.000	superfamily_ARM-type_fold	pfam_SF3b_su1,superfamily_ARM-type_fold	-	no_errors	SF3B1	HGNC	ENSG00000115524	44	0	0.00	47	35	42.17	-	-	-
SMAD7	0	genome.wustl.edu	37	18	46474794	46474795	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	18	46474794	46474795	-	G	INS	SMAD7	ENST00000262158	human	ensembl	69_37n	-1	known	frame_shift_ins	c.627_626	p.P210fs	1.000:1.000	superfamily_SMAD_FHA_domain	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD7	HGNC	ENSG00000101665	18	0	0.00	9	3	25.00	-	-	-
SPG11	0	genome.wustl.edu	37	15	44864968	44864968	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	15	44864968	44864968	G	C	SNP	SPG11	ENST00000261866	human	ensembl	69_37n	-1	known	missense	c.6256	p.L2086V	1.000	NULL	NULL	-	no_errors	SPG11	HGNC	ENSG00000104133	159	0	0.00	125	16	11.27	-	-	-
TESK2	0	genome.wustl.edu	37	1	45923438	45923438	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	1	45923438	45923438	T	C	SNP	TESK2	ENST00000372086	human	ensembl	69_37n	-1	known	missense	c.20	p.N7S	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TESK2	HGNC	ENSG00000070759	298	0	0.00	242	129	34.77	-	-	-
TGIF2	0	genome.wustl.edu	37	20	35219587	35219587	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	20	35219587	35219587	C	T	SNP	TGIF2	ENST00000373872	human	ensembl	69_37n	+1	known	missense	c.467	p.P156L	0.973	NULL	pfam_Homeodomain,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	TGIF2	HGNC	ENSG00000118707	45	0	0.00	40	14	25.00	-	-	-
TMCC3	0	genome.wustl.edu	37	12	94965266	94965266	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	12	94965266	94965266	C	G	SNP	TMCC3	ENST00000261226	human	ensembl	69_37n	-1	known	missense	c.1379	p.C460S	1.000	pfam_Predicted_TM_coiled-coil_2	pfam_Predicted_TM_coiled-coil_2	-	no_errors	TMCC3	HGNC	ENSG00000057704	216	0	0.00	201	35	14.77	-	-	-
TRAK1	0	genome.wustl.edu	37	3	42229603	42229603	+	Nonsense_Mutation	SNP	G	G	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	3	42229603	42229603	G	T	SNP	TRAK1	ENST00000396175	human	ensembl	69_37n	+1	known	nonsense	c.373	p.E125*	1.000	pfam_HAP1_N	pfam_HAP1_N,pfam_Traffickng_kinesin-bd_prot_dom	-	no_errors	TRAK1	HGNC	ENSG00000182606	150	0	0.00	56	39	41.05	-	-	-
UBA2	0	genome.wustl.edu	37	19	34960012	34960012	+	Silent	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	19	34960012	34960012	C	T	SNP	UBA2	ENST00000246548	human	ensembl	69_37n	+1	known	silent	c.1809	p.V603	0.011	NULL	pfam_ThiF_NAD_FAD-bd,pfam_UBact_repeat,pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB	-	no_errors	UBA2	HGNC	ENSG00000126261	84	0	0.00	78	28	26.17	-	-	-
UBE3B	0	genome.wustl.edu	37	12	109959017	109959017	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	12	109959017	109959017	T	C	SNP	UBE3B	ENST00000342494	human	ensembl	69_37n	+1	known	missense	c.2141	p.F714S	1.000	superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_IQ_motif_EF-hand-BS,superfamily_HECT,smart_IQ_motif_EF-hand-BS,smart_HECT,pfscan_HECT,pfscan_IQ_motif_EF-hand-BS	-	no_errors	UBE3B	HGNC	ENSG00000151148	124	0	0.00	50	29	36.71	-	-	-
USH2A	0	genome.wustl.edu	37	1	215802376	215802376	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	1	215802376	215802376	C	T	SNP	USH2A	ENST00000366943	human	ensembl	69_37n	-1	known	missense	c.15371	p.G5124E	1.000	NULL	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	99	0	0.00	102	28	21.37	-	-	-
XDH	0	genome.wustl.edu	37	2	31595149	31595149	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	2	31595149	31595149	C	T	SNP	XDH	ENST00000379416	human	ensembl	69_37n	-1	known	missense	c.1801	p.E601K	0.397	pfam_Ald_Oxase/Xan_DH_a/b,superfamily_Ald_Oxase/Xan_DH_a/b,pirsf_Ald_Oxase/xanthine_DH	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Xanthine_DH_ssu	-	no_errors	XDH	HGNC	ENSG00000158125	52	0	0.00	32	7	17.50	-	-	-
ZBBX	0	genome.wustl.edu	37	3	167034856	167034856	+	Silent	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	3	167034856	167034856	C	T	SNP	ZBBX	ENST00000307529	human	ensembl	69_37n	-1	known	silent	c.1131	p.L377	0.953	NULL	pfam_Znf_B-box	-	no_errors	ZBBX	HGNC	ENSG00000169064	133	0	0.00	240	40	14.23	-	-	-
ZMYND8	0	genome.wustl.edu	37	20	45867732	45867732	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	20	45867732	45867732	G	A	SNP	ZMYND8	ENST00000536340	human	ensembl	69_37n	-1	known	missense	c.2456	p.P819L	0.830	NULL	pfam_DUF3544,pfam_Bromodomain,pfam_PWWP,pfam_Znf_PHD-finger,pfam_Znf_MYND,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP,pfscan_PWWP,pfscan_Znf_MYND,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	ZMYND8	HGNC	ENSG00000101040	74	0	0.00	38	14	26.42	-	-	-
ZNF420	0	genome.wustl.edu	37	19	37618814	37618814	+	Nonsense_Mutation	SNP	T	T	G			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	19	37618814	37618814	T	G	SNP	ZNF420	ENST00000337995	human	ensembl	69_37n	+1	known	nonsense	c.921	p.Y307*	0.995	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF420	HGNC	ENSG00000197050	75	0	0.00	96	26	21.14	-	-	-
ZNF609	0	genome.wustl.edu	37	15	64792134	64792134	+	Silent	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	15	64792134	64792134	C	T	SNP	ZNF609	ENST00000326648	human	ensembl	69_37n	+1	known	silent	c.516	p.S172	0.987	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF609	HGNC	ENSG00000180357	160	0	0.00	163	65	28.38	-	-	-
ZSCAN5A	0	genome.wustl.edu	37	19	56734011	56734011	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	19	56734011	56734011	C	T	SNP	ZSCAN5A	ENST00000391713	human	ensembl	69_37n	-1	known	missense	c.688	p.E230K	0.257	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN5A	HGNC	ENSG00000131848	478	0	0.00	332	51	13.28	-	-	-
ZSCAN5A	0	genome.wustl.edu	37	19	56735006	56735006	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0EV-01A-11W-A050-09	TCGA-A2-A0EV-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9433bf4f-23ba-4fe7-9503-1ad243d74225	633b376d-d59f-4f31-8d1a-0b1d89650a8e	19	56735006	56735006	C	G	SNP	ZSCAN5A	ENST00000391713	human	ensembl	69_37n	-1	known	missense	c.582	p.R194S	0.000	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN5A	HGNC	ENSG00000131848	85	0	0.00	67	9	11.84	-	-	-
