Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACLY	0	genome.wustl.edu	37	17	40030163	40030163	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	17	40030163	40030163	C	T	SNP	ACLY	ENST00000352035	human	ensembl	69_37n	-1	known	missense	c.2543	p.R848Q	1.000	superfamily_Citrate_synthase-like_core,pirsf_ATP-citrate_synthase	pfam_Citrate_synthase-like,pfam_CoA_ligase,pfam_CoA-bd,pfam_ATP-grasp_succ-CoA_synth-type,superfamily_Citrate_synthase-like_core,superfamily_Succinyl-CoA_synth-like,smart_CoA-bd,pirsf_ATP-citrate_synthase	-	no_errors	ACLY	HGNC	ENSG00000131473	29	0	0.00	45	26	36.62	-	-	-
AOC3	0	genome.wustl.edu	37	17	41008381	41008381	+	Silent	SNP	C	C	T			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	17	41008381	41008381	C	T	SNP	AOC3	ENST00000308423	human	ensembl	69_37n	+1	known	silent	c.2106	p.G702	1.000	pfam_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_C	pfam_Cu_amine_oxidase_C,pfam_Cu_amine_oxidase_N2,pfam_Cu_amine_oxidase_N3,superfamily_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_N-reg,prints_Cu_amine_oxidase	-	no_errors	AOC3	HGNC	ENSG00000131471	88	0	0.00	45	29	39.19	-	-	-
ATP9A	0	genome.wustl.edu	37	20	50235558	50235558	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	20	50235558	50235558	G	A	SNP	ATP9A	ENST00000338821	human	ensembl	69_37n	-1	known	missense	c.2140	p.L714F	1.000	pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transl	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP9A	HGNC	ENSG00000054793	31	0	0.00	17	39	69.64	-	-	-
BRDT	0	genome.wustl.edu	37	1	92445220	92445220	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	1	92445220	92445220	G	A	SNP	BRDT	ENST00000362005	human	ensembl	69_37n	+1	known	missense	c.1193	p.G398D	0.126	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRDT	HGNC	ENSG00000137948	99	0	0.00	85	22	20.56	-	-	-
BTN2A1	0	genome.wustl.edu	37	6	26459794	26459795	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	6	26459794	26459795	-	A	INS	BTN2A1	ENST00000312541	human	ensembl	69_37n	+1	known	frame_shift_ins	c.168_169	p.N57fs	0.877:0.868	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_SPRY_rcpt,pfam_Ig_V-set,pfam_CD80_C2-set,superfamily_ConA-like_lec_gl,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like	-	no_errors	BTN2A1	HGNC	ENSG00000112763	272	0	0.00	197	93	32.07	-	-	-
C19orf44	0	genome.wustl.edu	37	19	16611796	16611796	+	Missense_Mutation	SNP	A	A	C			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	19	16611796	16611796	A	C	SNP	C19orf44	ENST00000221671	human	ensembl	69_37n	+1	known	missense	c.193	p.K65Q	0.000	NULL	NULL	-	no_errors	C19orf44	HGNC	ENSG00000105072	51	0	0.00	49	17	25.76	-	-	-
CEP76	0	genome.wustl.edu	37	18	12697393	12697393	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	18	12697393	12697393	T	C	SNP	CEP76	ENST00000262127	human	ensembl	69_37n	-1	known	missense	c.535	p.M179V	1.000	superfamily_C2_Ca/lipid-bd_dom_CaLB	superfamily_C2_Ca/lipid-bd_dom_CaLB	-	no_errors	CEP76	HGNC	ENSG00000101624	129	0	0.00	91	38	29.46	-	-	-
CFTR	0	genome.wustl.edu	37	7	117305522	117305530	+	In_Frame_Del	DEL	AATAATTAG	AATAATTAG	-			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	AATAATTAG	AATAATTAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	7	117305522	117305530	AATAATTAG	-	DEL	CFTR	ENST00000003084	human	ensembl	69_37n	+1	known	in_frame_del	c.4146_4154	p.IIR1383in_frame_del	0.997:1.000:1.000:0.998:1.000:1.000:1.000:1.000:1.000	smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_cAMP_cl_channel	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1,prints_CysFib_conduc_TM,tigrfam_cAMP_cl_channel	-	no_errors	CFTR	HGNC	ENSG00000001626	143	0	0.00	63	13	17.11	-	-	-
CIT	0	genome.wustl.edu	37	12	120146063	120146063	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	12	120146063	120146063	G	A	SNP	CIT	ENST00000261833	human	ensembl	69_37n	-1	known	missense	c.5006	p.S1669F	1.000	pfam_Citron,smart_Citron,pirsf_Citron_Rho-interacting_kinase	pfam_Citron,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pirsf_Citron_Rho-interacting_kinase,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	CIT	HGNC	ENSG00000122966	112	0	0.00	64	55	46.22	-	-	-
CSMD1	0	genome.wustl.edu	37	8	3216673	3216673	+	Splice_Site	SNP	C	C	T			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	8	3216673	3216673	C	T	SNP	CSMD1	ENST00000520002	human	ensembl	69_37n	-1	known	splice_site	c.3307+1	e22+1	1.000	-	-	-	no_errors	CSMD1	HGNC	ENSG00000183117	55	0	0.00	24	10	29.41	-	-	-
DMRTA1	0	genome.wustl.edu	37	9	22451646	22451646	+	Silent	SNP	T	T	A			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	9	22451646	22451646	T	A	SNP	DMRTA1	ENST00000325870	human	ensembl	69_37n	+1	known	silent	c.1251	p.A417	0.683	NULL	pfam_DM_DNA-bd,pfam_DMA,superfamily_DM_DNA-bd,superfamily_UBA-like,smart_DM_DNA-bd,pfscan_DM_DNA-bd	-	no_errors	DMRTA1	HGNC	ENSG00000176399	39	0	0.00	61	44	41.51	-	-	-
DYNC2H1	0	genome.wustl.edu	37	11	103055626	103055626	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	11	103055626	103055626	A	G	SNP	DYNC2H1	ENST00000398093	human	ensembl	69_37n	+1	known	missense	c.6479	p.N2160S	1.000	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	247	0	0.00	169	84	33.20	-	-	-
DYRK2	0	genome.wustl.edu	37	12	68051820	68051820	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	12	68051820	68051820	G	T	SNP	DYRK2	ENST00000344096	human	ensembl	69_37n	+1	known	missense	c.1133	p.R378L	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	DYRK2	HGNC	ENSG00000127334	197	0	0.00	93	38	29.01	-	-	-
EFNB1	0	genome.wustl.edu	37	X	68060260	68060260	+	Silent	SNP	G	G	A			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	X	68060260	68060260	G	A	SNP	EFNB1	ENST00000204961	human	ensembl	69_37n	+1	known	silent	c.804	p.R268	0.982	NULL	pfam_Ephrin,superfamily_Cupredoxin,prints_Ephrin	-	no_errors	EFNB1	HGNC	ENSG00000090776	45	0	0.00	60	20	25.00	-	-	-
EPHB3	0	genome.wustl.edu	37	3	184299398	184299398	+	Silent	SNP	T	T	C			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	3	184299398	184299398	T	C	SNP	EPHB3	ENST00000330394	human	ensembl	69_37n	+1	known	silent	c.2985	p.P995	0.091	pirsf_Tyr_kinase_ephrin_rcpt,superfamily_SAM/pointed	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_cat_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_cat_dom	-	no_errors	EPHB3	HGNC	ENSG00000182580	8	0	0.00	38	11	22.45	-	-	-
FAT2	0	genome.wustl.edu	37	5	150925419	150925419	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	5	150925419	150925419	T	C	SNP	FAT2	ENST00000261800	human	ensembl	69_37n	-1	known	missense	c.5269	p.M1757V	0.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570	162	0	0.00	43	109	71.71	-	-	-
FAT3	0	genome.wustl.edu	37	11	92543074	92543074	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	11	92543074	92543074	G	A	SNP	FAT3	ENST00000298047	human	ensembl	69_37n	+1	known	missense	c.9313	p.A3105T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,superfamily_Cadherin-like,smart_Cadherin,smart_EGF-like,smart_Laminin_G,smart_EGF-like_Ca-bd,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	75	0	0.00	55	24	30.38	-	-	-
FBN2	0	genome.wustl.edu	37	5	127855061	127855061	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	5	127855061	127855061	G	T	SNP	FBN2	ENST00000262464	human	ensembl	69_37n	-1	known	missense	c.533	p.P178H	1.000	pirsf_Fibrillin,pfscan_EG-like_dom	pirsf_Fibrillin,pfam_EGF-like_Ca-bd,pfam_EGF-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Cadherin-like,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom	-	no_errors	FBN2	HGNC	ENSG00000138829	76	0	0.00	53	12	18.46	-	-	-
HDAC9	0	genome.wustl.edu	37	7	18801793	18801793	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	7	18801793	18801793	G	T	SNP	HDAC9	ENST00000441542	human	ensembl	69_37n	+1	known	missense	c.2057	p.R686L	1.000	pfam_His_deacetylse_dom,pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC9	HGNC	ENSG00000048052	87	0	0.00	39	76	64.41	-	-	-
ITGA2B	0	genome.wustl.edu	37	17	42454377	42454377	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	17	42454377	42454377	C	T	SNP	ITGA2B	ENST00000262407	human	ensembl	69_37n	-1	known	missense	c.2267	p.S756N	1.000	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA2B	HGNC	ENSG00000005961	26	0	0.00	48	22	31.43	-	-	-
ITGA8	0	genome.wustl.edu	37	10	15628600	15628600	+	Silent	SNP	C	C	T			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	10	15628600	15628600	C	T	SNP	ITGA8	ENST00000378076	human	ensembl	69_37n	-1	known	silent	c.2355	p.A785	0.924	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA8	HGNC	ENSG00000077943	194	0	0.00	143	60	29.56	-	-	-
MLL3	0	genome.wustl.edu	37	7	151896496	151896496	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	7	151896496	151896496	T	C	SNP	MLL3	ENST00000355193	human	ensembl	69_37n	-1	known	missense	c.4141	p.I1381V	0.927	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	MLL3	HGNC	ENSG00000055609	130	0	0.00	33	77	70.00	-	-	-
MORN5	0	genome.wustl.edu	37	9	124936830	124936830	+	Silent	SNP	C	C	T			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	9	124936830	124936830	C	T	SNP	MORN5	ENST00000536616	human	ensembl	69_37n	+1	known	silent	c.363	p.Y121	0.977	NULL	pfam_MORN,smart_MORN	-	no_errors	MORN5	HGNC	ENSG00000185681	137	0	0.00	107	55	33.95	-	-	-
MOV10L1	0	genome.wustl.edu	37	22	50553671	50553671	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	22	50553671	50553671	G	A	SNP	MOV10L1	ENST00000262794	human	ensembl	69_37n	+1	known	missense	c.1255	p.G419R	0.948	NULL	superfamily_NA-bd_OB-fold-like	-	no_errors	MOV10L1	HGNC	ENSG00000073146	44	0	0.00	33	13	28.26	-	-	-
MYL1	0	genome.wustl.edu	37	2	211179766	211179766	+	Frame_Shift_Del	DEL	T	T	-			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	2	211179766	211179766	T	-	DEL	MYL1	ENST00000352451	human	ensembl	69_37n	-1	known	frame_shift_del	c.1	p.M1fs	1.000	NULL	smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	MYL1	HGNC	ENSG00000168530	41	0	0.00	49	21	28.38	-	-	-
OGDHL	0	genome.wustl.edu	37	10	50966465	50966465	+	Silent	SNP	G	G	A			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	10	50966465	50966465	G	A	SNP	OGDHL	ENST00000374103	human	ensembl	69_37n	-1	known	silent	c.174	p.A58	0.996	pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_DH_E1,pfam_Transketolase-like_Pyr-bd,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	OGDHL	HGNC	ENSG00000197444	8	0	0.00	9	4	30.77	-	-	-
OR51A2	0	genome.wustl.edu	37	11	4976683	4976683	+	Silent	SNP	G	G	A			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	11	4976683	4976683	G	A	SNP	OR51A2	ENST00000380371	human	ensembl	69_37n	-1	known	silent	c.261	p.F87	0.001	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR51A2	HGNC	ENSG00000205496	110	0	0.00	34	50	59.52	-	-	-
OR52E4	0	genome.wustl.edu	37	11	5905807	5905807	+	Silent	SNP	C	C	T			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	11	5905807	5905807	C	T	SNP	OR52E4	ENST00000316987	human	ensembl	69_37n	+1	known	silent	c.285	p.S95	0.006	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR52E4	HGNC	ENSG00000180974	91	0	0.00	82	29	25.89	-	-	-
PCDHGB2	0	genome.wustl.edu	37	5	140740551	140740551	+	Silent	SNP	T	T	C			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	5	140740551	140740551	T	C	SNP	PCDHGB2	ENST00000522605	human	ensembl	69_37n	+1	known	silent	c.849	p.N283	0.001	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB2	HGNC	ENSG00000253910	30	0	0.00	38	22	36.67	-	-	-
PHACTR1	0	genome.wustl.edu	37	6	13230284	13230286	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	6	13230284	13230286	AGG	-	DEL	PHACTR1	ENST00000432934	human	ensembl	69_37n	+1	known	in_frame_del	c.1457_1459	p.KV486in_frame_delI	1.000:1.000:1.000	NULL	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR1	HGNC	ENSG00000112137	45	0	0.00	49	20	28.57	-	-	-
PPM1H	0	genome.wustl.edu	37	12	63042385	63042385	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	12	63042385	63042385	G	A	SNP	PPM1H	ENST00000228705	human	ensembl	69_37n	-1	known	missense	c.1429	p.R477C	1.000	superfamily_PP2C-like,smart_PP2C-like	pfam_PP2C-like,superfamily_PP2C-like,smart_PP2C-like	-	no_errors	PPM1H	HGNC	ENSG00000111110	105	0	0.00	81	44	34.92	-	-	-
PTEN	0	genome.wustl.edu	37	10	89685293	89685298	+	In_Frame_Del	DEL	ACCATT	ACCATT	-			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	ACCATT	ACCATT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	10	89685293	89685298	ACCATT	-	DEL	PTEN	ENST00000371953	human	ensembl	69_37n	+1	known	in_frame_del	c.188_193	p.HY64in_frame_del	1.000:1.000:1.000:1.000:1.000:1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Phosphatase_tensin-typ	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-specificity_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862	104	0	0.00	41	21	33.87	-	-	-
SLC6A4	0	genome.wustl.edu	37	17	28545941	28545941	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	17	28545941	28545941	G	A	SNP	SLC6A4	ENST00000261707	human	ensembl	69_37n	-1	known	missense	c.352	p.L118F	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	pfam_Na/ntran_symport,pfam_Na/ntran_symport_serotonin_N,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_serotonin_N	-	no_errors	SLC6A4	HGNC	ENSG00000108576	69	0	0.00	71	35	33.02	-	-	-
SORBS2	0	genome.wustl.edu	37	4	186544158	186544158	+	Missense_Mutation	SNP	A	A	T			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	4	186544158	186544158	A	T	SNP	SORBS2	ENST00000284776	human	ensembl	69_37n	-1	known	missense	c.2413	p.C805S	0.444	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	SORBS2	HGNC	ENSG00000154556	35	0	0.00	32	24	42.86	-	-	-
TP53	0	genome.wustl.edu	37	17	7579343	7579351	+	In_Frame_Del	DEL	TGCAAGAAG	TGCAAGAAG	-			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	TGCAAGAAG	TGCAAGAAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	17	7579343	7579351	TGCAAGAAG	-	DEL	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	in_frame_del	c.344_336	p.FLH113in_frame_del	0.930:0.938:0.948:0.998:1.000:1.000:1.000:0.999:0.805	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	99	0	0.00	7	6	46.15	-	-	-
VKORC1	0	genome.wustl.edu	37	16	31104727	31104727	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0SV-01A-11D-A099-09	TCGA-A2-A0SV-10A-01W-A097-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6d3206c6-0ca8-4b2b-a160-b1719217f9c7	db8da47e-0daa-4ebc-81fa-756dacf71ca7	16	31104727	31104727	G	A	SNP	VKORC1	ENST00000498155	human	ensembl	69_37n	-1	putative	missense	c.286	p.R96W	0.840	NULL	NULL	-	no_errors	VKORC1	HGNC	ENSG00000167397	66	0	0.00	32	21	39.62	-	-	-
