Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCC2	0	genome.wustl.edu	37	10	101567986	101567986	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	10	101567986	101567986	G	C	SNP	ABCC2	ENST00000370449	human	ensembl	69_37n	+1	known	missense	c.1815	p.Q605H	1.000	superfamily_ABC_transptrTM_dom_typ1,pfscan_ABC_transporter_type1,tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC2	HGNC	ENSG00000023839	148	0	0.00	29	8	21.05	-	-	-
ATXN2L	0	genome.wustl.edu	37	16	28844517	28844517	+	Silent	SNP	G	G	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	16	28844517	28844517	G	A	SNP	ATXN2L	ENST00000395547	human	ensembl	69_37n	+1	known	silent	c.1797	p.K599	1.000	NULL	pfam_LsmAD_domain,pfam_Ataxin-2_C,superfamily_LSM_dom	-	no_errors	ATXN2L	HGNC	ENSG00000168488	77	0	0.00	32	5	13.51	-	-	-
BTAF1	0	genome.wustl.edu	37	10	93768685	93768685	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	10	93768685	93768685	C	G	SNP	BTAF1	ENST00000265990	human	ensembl	69_37n	+1	known	missense	c.3913	p.L1305V	1.000	pfam_SNF2_N,superfamily_ARM-type_fold,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DUF3535,pfam_SNF2_N,pfam_HEAT,pfam_Helicase_C,superfamily_ARM-type_fold,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	BTAF1	HGNC	ENSG00000095564	134	0	0.00	55	15	21.43	-	-	-
C2orf62	0	genome.wustl.edu	37	2	219232206	219232206	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	2	219232206	219232206	G	A	SNP	C2orf62	ENST00000289388	human	ensembl	69_37n	+1	known	missense	c.886	p.D296N	0.993	NULL	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	-	no_errors	C2orf62	HGNC	ENSG00000158428	111	0	0.00	23	7	23.33	-	-	-
C4orf21	0	genome.wustl.edu	37	4	113468473	113468473	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	4	113468473	113468473	C	A	SNP	C4orf21	ENST00000505019	human	ensembl	69_37n	-1	known	nonsense	c.5566	p.E1856*	1.000	NULL	pfam_DUF2439,pfam_Znf_GRF	-	no_errors	C4orf21	HGNC	ENSG00000138658	104	0	0.00	35	7	16.28	-	-	-
CCNA2	0	genome.wustl.edu	37	4	122743651	122743651	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	4	122743651	122743651	G	A	SNP	CCNA2	ENST00000274026	human	ensembl	69_37n	-1	known	missense	c.364	p.R122C	0.000	pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNA2	HGNC	ENSG00000145386	242	0	0.00	72	11	13.25	-	-	-
CDC25B	0	genome.wustl.edu	37	20	3783790	3783790	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	20	3783790	3783790	C	G	SNP	CDC25B	ENST00000245960	human	ensembl	69_37n	+1	known	missense	c.1293	p.I431M	0.992	superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom,prints_MPI_Phosphatase	pfam_MPI_Phosphatase,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom,prints_MPI_Phosphatase	-	no_errors	CDC25B	HGNC	ENSG00000101224	113	1	0.88	27	13	32.50	-	-	-
CLTCL1	0	genome.wustl.edu	37	22	19220950	19220950	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	22	19220950	19220950	C	A	SNP	CLTCL1	ENST00000263200	human	ensembl	69_37n	-1	known	missense	c.1363	p.D455Y	1.000	superfamily_ARM-type_fold,pirsf_Clathrin_heavy_chain	pfam_Clathrin_H-chain/VPS_repeat,pfam_Clathrin_H-chain_propeller_rpt,pfam_Clathrin_H-chain_linker_core,superfamily_Clathrin_H-chain_propeller_N,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	-	no_errors	CLTCL1	HGNC	ENSG00000070371	86	0	0.00	35	5	12.50	-	-	-
COL12A1	0	genome.wustl.edu	37	6	75857512	75857512	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	6	75857512	75857512	C	G	SNP	COL12A1	ENST00000419671	human	ensembl	69_37n	-1	novel	missense	c.520	p.E174Q	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,superfamily_Fibronectin_type3,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_start_codon:pseudogene:no_stop_codon	COL12A1	HGNC	ENSG00000111799	197	0	0.00	55	19	25.68	-	-	-
COX19	0	genome.wustl.edu	37	7	966263	966263	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	7	966263	966263	C	T	SNP	COX19	ENST00000457254	human	ensembl	69_37n	-1	known	missense	c.343	p.E115K	0.996	NULL	pfam_CHCH,superfamily_MTCP1	-	no_errors	COX19	HGNC	ENSG00000240230	113	0	0.00	15	5	25.00	-	-	-
CR1	0	genome.wustl.edu	37	1	207760857	207760857	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	1	207760857	207760857	C	G	SNP	CR1	ENST00000367049	human	ensembl	69_37n	+1	known	missense	c.5657	p.S1886C	1.000	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1	HGNC	ENSG00000203710	156	0	0.00	84	12	12.50	-	-	-
DLG5	0	genome.wustl.edu	37	10	79595622	79595622	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	10	79595622	79595622	C	T	SNP	DLG5	ENST00000372391	human	ensembl	69_37n	-1	known	missense	c.1496	p.R499Q	1.000	NULL	pfam_PDZ,pfam_DUF622,pfam_Guanylate_kin,superfamily_PDZ,superfamily_SH3_domain,superfamily_DEATH-like,smart_PDZ,smart_SH3_domain,smart_Guanylate_kin/L-typ_Ca_channel,pfscan_CARD,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin	-	no_errors	DLG5	HGNC	ENSG00000151208	203	1	0.49	28	4	12.50	-	-	-
DOT1L	0	genome.wustl.edu	37	19	2211749	2211749	+	Splice_Site	SNP	G	G	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	19	2211749	2211749	G	T	SNP	DOT1L	ENST00000398665	human	ensembl	69_37n	+1	known	splice_site	c.1466-1	e16-1	1.000	-	-	-	no_errors	DOT1L	HGNC	ENSG00000104885	153	0	0.00	6	13	68.42	-	-	-
DZANK1	0	genome.wustl.edu	37	20	18377116	18377116	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	20	18377116	18377116	C	T	SNP	DZANK1	ENST00000358866	human	ensembl	69_37n	-1	known	missense	c.1007	p.R336K	1.000	NULL	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	DZANK1	HGNC	ENSG00000089091	172	0	0.00	70	10	12.50	-	-	-
FAM75A2	0	genome.wustl.edu	37	9	39887042	39887042	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	9	39887042	39887042	C	A	SNP	FAM75A2	ENST00000456183	human	ensembl	69_37n	+1	known	nonsense	c.284	p.S95*	0.000	NULL	NULL	-	no_errors	FAM75A2	HGNC	ENSG00000204848	392	0	0.00	55	10	15.38	-	-	-
FLNA	0	genome.wustl.edu	37	X	153580297	153580297	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	X	153580297	153580297	G	-	DEL	FLNA	ENST00000369850	human	ensembl	69_37n	-1	known	frame_shift_del	c.6862	p.R2288fs	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNA	HGNC	ENSG00000196924	104	0	0.00	17	2	10.53	-	-	-
FSHR	0	genome.wustl.edu	37	2	49295407	49295407	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	2	49295407	49295407	G	A	SNP	FSHR	ENST00000406846	human	ensembl	69_37n	-1	known	nonsense	c.175	p.R59*	1.000	prints_FSH_rcpt	pfam_7TM_GPCR_Rhodpsn,pfam_GnHR_TM,pfam_LRR-contain_N,pfam_Leu-rich_rpt,smart_LRR-contain_N,pfscan_GPCR_Rhodpsn_supfam,prints_FSH_rcpt,prints_Gphrmn_rcpt,prints_7TM_GPCR_Rhodpsn,prints_TSH_rcpt	-	no_errors	FSHR	HGNC	ENSG00000170820	91	0	0.00	32	7	17.95	-	-	-
GNB3	0	genome.wustl.edu	37	12	6952186	6952186	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	12	6952186	6952186	C	T	SNP	GNB3	ENST00000229264	human	ensembl	69_37n	+1	known	missense	c.149	p.T50M	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Guanine_nucleotide-bd_bsu	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Guanine_nucleotide-bd_bsu,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Gprotein_B,prints_G-protein_beta_WD-40_rep	-	no_errors	GNB3	HGNC	ENSG00000111664	164	0	0.00	21	5	19.23	-	-	-
GPR75	0	genome.wustl.edu	37	2	54081234	54081234	+	Silent	SNP	G	G	C			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	2	54081234	54081234	G	C	SNP	GPR75	ENST00000394705	human	ensembl	69_37n	-1	known	silent	c.660	p.V220	0.977	pfam_7TM_GPCR_Rhodpsn,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	GPR75	HGNC	ENSG00000119737	136	0	0.00	26	7	21.21	-	-	-
GPR87	0	genome.wustl.edu	37	3	151017872	151017872	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	3	151017872	151017872	G	A	SNP	GPR87	ENST00000260843	human	ensembl	69_37n	-1	known	missense	c.17	p.T6M	0.719	NULL	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor,prints_P2Y13_purnocptor,prints_UDPG_rcpt	-	no_errors	GPR87	HGNC	ENSG00000138271	175	1	0.57	52	10	16.13	-	-	-
HNRNPCL1	0	genome.wustl.edu	37	1	12907682	12907682	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	1	12907682	12907682	C	T	SNP	HNRNPCL1	ENST00000317869	human	ensembl	69_37n	-1	known	missense	c.461	p.R154Q	0.963	pirsf_hnRNP_C_Raly	pfam_RRM_dom,smart_RRM_dom,pirsf_hnRNP_C_Raly,pfscan_RRM_dom	-	no_errors	HNRNPCL1	HGNC	ENSG00000179172	178	0	0.00	46	18	28.12	-	-	-
KDM4C	0	genome.wustl.edu	37	9	6887970	6887970	+	Silent	SNP	A	A	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	9	6887970	6887970	A	T	SNP	KDM4C	ENST00000381309	human	ensembl	69_37n	+1	known	silent	c.690	p.P230	0.868	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,superfamily_Chorismate_mutase_type_II,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4C	HGNC	ENSG00000107077	279	0	0.00	122	23	15.86	-	-	-
MTA3	0	genome.wustl.edu	37	2	42871362	42871362	+	Silent	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	2	42871362	42871362	C	T	SNP	MTA3	ENST00000405094	human	ensembl	69_37n	+1	known	silent	c.477	p.D159	1.000	pfam_ELM2_dom,pfscan_ELM2_dom	pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	MTA3	HGNC	ENSG00000057935	209	0	0.00	43	13	23.21	-	-	-
MTSS1	0	genome.wustl.edu	37	8	125575147	125575147	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	8	125575147	125575147	G	C	SNP	MTSS1	ENST00000518547	human	ensembl	69_37n	-1	known	missense	c.911	p.S304C	1.000	NULL	pfam_IRSp53/MIM_homology_IMD,pfscan_WH2_dom	-	no_errors	MTSS1	HGNC	ENSG00000170873	74	0	0.00	53	7	11.67	-	-	-
NFKB1	0	genome.wustl.edu	37	4	103522129	103522129	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	4	103522129	103522129	C	T	SNP	NFKB1	ENST00000226574	human	ensembl	69_37n	+1	known	missense	c.1715	p.S572F	0.997	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_RHD,pfam_Ankyrin_rpt,pfam_Death,superfamily_p53-like_TF_DNA-bd,superfamily_Ankyrin_rpt-contain_dom,superfamily_Ig_E-set,superfamily_DEATH-like,smart_IPT_TIG_rcpt,smart_Ankyrin_rpt,smart_Death,prints_NF_Rel_dor,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_RHD	-	no_errors	NFKB1	HGNC	ENSG00000109320	159	0	0.00	67	12	15.19	-	-	-
NR4A1	0	genome.wustl.edu	37	12	52451198	52451198	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	12	52451198	52451198	G	A	SNP	NR4A1	ENST00000545748	human	ensembl	69_37n	+1	known	missense	c.1586	p.C529Y	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Nuc_orph_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Nuc_orph_rcpt,prints_Nuc_orp_HMR_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt	-	no_errors	NR4A1	HGNC	ENSG00000123358	172	0	0.00	25	5	16.67	-	-	-
OR5T2	0	genome.wustl.edu	37	11	56000599	56000599	+	Silent	SNP	A	A	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	11	56000599	56000599	A	T	SNP	OR5T2	ENST00000313264	human	ensembl	69_37n	-1	known	silent	c.63	p.S21	0.002	NULL	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR5T2	HGNC	ENSG00000181718	66	0	0.00	23	5	17.86	-	-	-
PBX1	0	genome.wustl.edu	37	1	164815893	164815893	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	1	164815893	164815893	C	A	SNP	PBX1	ENST00000420696	human	ensembl	69_37n	+1	known	missense	c.1273	p.H425N	1.000	NULL	pfam_PBX,pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	PBX1	HGNC	ENSG00000185630	156	0	0.00	44	5	10.20	-	-	-
PDZRN3	0	genome.wustl.edu	37	3	73453303	73453303	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	3	73453303	73453303	C	T	SNP	PDZRN3	ENST00000263666	human	ensembl	69_37n	-1	known	missense	c.1162	p.E388K	1.000	NULL	pfam_PDZ,pfam_Znf_C3HC4_RING-type,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	PDZRN3	HGNC	ENSG00000121440	108	0	0.00	24	10	29.41	-	-	-
PHF3	0	genome.wustl.edu	37	6	64356702	64356702	+	Splice_Site	DEL	T	T	-			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	6	64356702	64356702	T	-	DEL	PHF3	ENST00000262043	human	ensembl	69_37n	+1	known	splice_site_del	c.244+2	e1+2	1.000	-	-	-	no_errors	PHF3	HGNC	ENSG00000118482	48	0	0.00	10	2	16.67	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178921553	178921553	+	Missense_Mutation	SNP	T	T	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	3	178921553	178921553	T	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1035	p.N345K	1.000	superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_C2_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	63	0	0.00	42	11	20.75	-	-	-
PLEKHA1	0	genome.wustl.edu	37	10	124189401	124189401	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	10	124189401	124189401	G	C	SNP	PLEKHA1	ENST00000368990	human	ensembl	69_37n	+1	known	missense	c.1162	p.D388H	0.169	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA1	HGNC	ENSG00000107679	91	0	0.00	16	8	33.33	-	-	-
POLR2H	0	genome.wustl.edu	37	3	184082777	184082777	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	3	184082777	184082777	G	A	SNP	POLR2H	ENST00000296223	human	ensembl	69_37n	+1	known	missense	c.97	p.E33K	1.000	pfam_RNA_pol_Rpb8,superfamily_NA-bd_OB-fold-like,smart_RNA_pol_Rpb8,pirsf_RNA_pol_Rpb8	pfam_RNA_pol_Rpb8,superfamily_NA-bd_OB-fold-like,smart_RNA_pol_Rpb8,pirsf_RNA_pol_Rpb8	-	no_errors	POLR2H	HGNC	ENSG00000163882	136	0	0.00	67	12	15.19	-	-	-
PSG1	0	genome.wustl.edu	37	19	43376163	43376163	+	Silent	SNP	G	G	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	19	43376163	43376163	G	A	SNP	PSG1	ENST00000312439	human	ensembl	69_37n	-1	known	silent	c.465	p.N155	0.011	pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	PSG1	HGNC	ENSG00000231924	262	0	0.00	51	35	40.70	-	-	-
PSMA3	0	genome.wustl.edu	37	14	58724656	58724656	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	14	58724656	58724656	G	C	SNP	PSMA3	ENST00000216455	human	ensembl	69_37n	+1	known	missense	c.344	p.R115T	1.000	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b,pfam_Proteasome_asu_N,smart_Proteasome_asu_N	-	no_errors	PSMA3	HGNC	ENSG00000100567	225	0	0.00	61	12	16.44	-	-	-
PTPRG	0	genome.wustl.edu	37	3	61975361	61975361	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	3	61975361	61975361	C	G	SNP	PTPRG	ENST00000474889	human	ensembl	69_37n	+1	known	missense	c.253	p.P85A	1.000	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRG	HGNC	ENSG00000144724	166	0	0.00	25	6	19.35	-	-	-
PYGB	0	genome.wustl.edu	37	20	25257355	25257355	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	20	25257355	25257355	G	-	DEL	PYGB	ENST00000216962	human	ensembl	69_37n	+1	known	frame_shift_del	c.734	p.W245fs	1.000	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGB	HGNC	ENSG00000100994	66	0	0.00	12	2	14.29	-	-	-
RHCE	0	genome.wustl.edu	37	1	25688942	25688942	+	Silent	SNP	A	A	C			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	1	25688942	25688942	A	C	SNP	RHCE	ENST00000413854	human	ensembl	69_37n	-1	known	silent	c.1176	p.R392	0.000	NULL	pfam_NH4_transpt_AmtB-like,superfamily_NH4_transpt_AmtB-like,prints_RhesusRHD	-	no_errors	RHCE	HGNC	ENSG00000188672	313	1	0.32	70	24	25.53	-	-	-
RTN4R	0	genome.wustl.edu	37	22	20230142	20230142	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	22	20230142	20230142	C	T	SNP	RTN4R	ENST00000043402	human	ensembl	69_37n	-1	known	missense	c.514	p.D172N	0.952	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	RTN4R	HGNC	ENSG00000040608	26	0	0.00	7	4	36.36	-	-	-
RXFP1	0	genome.wustl.edu	37	4	159547979	159547979	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	4	159547979	159547979	G	A	SNP	RXFP1	ENST00000307765	human	ensembl	69_37n	+1	known	missense	c.763	p.E255K	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_7TM_GPCR_Rhodpsn,pfam_Leu-rich_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Leu-rich_rpt_typical-subtyp,pfscan_LDrepeatLR_classA_rpt,pfscan_GPCR_Rhodpsn_supfam,prints_Relaxin_rcpt,prints_7TM_GPCR_Rhodpsn,prints_Gphrmn_rcpt	-	no_errors	RXFP1	HGNC	ENSG00000171509	308	0	0.00	181	39	17.73	-	-	-
SCN9A	0	genome.wustl.edu	37	2	167149874	167149874	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	2	167149874	167149874	G	-	DEL	SCN9A	ENST00000303354	human	ensembl	69_37n	-1	known	frame_shift_del	c.977	p.P326fs	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN9A	HGNC	ENSG00000169432	84	0	0.00	11	2	15.38	-	-	-
SENP6	0	genome.wustl.edu	37	6	76385620	76385620	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	6	76385620	76385620	C	G	SNP	SENP6	ENST00000370014	human	ensembl	69_37n	+1	known	missense	c.1471	p.L491V	1.000	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP6	HGNC	ENSG00000112701	127	0	0.00	70	15	17.65	-	-	-
SEPT14	0	genome.wustl.edu	37	7	55910784	55910784	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	7	55910784	55910784	C	G	SNP	SEPT14	ENST00000388975	human	ensembl	69_37n	-1	known	missense	c.409	p.E137Q	1.000	pfam_Cell_div_GTP-bd,pirsf_Septin	pfam_Cell_div_GTP-bd,pirsf_Septin	-	no_errors	SEPT14	HGNC	ENSG00000154997	170	0	0.00	75	14	15.73	-	-	-
SLITRK5	0	genome.wustl.edu	37	13	88329051	88329051	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	13	88329051	88329051	G	C	SNP	SLITRK5	ENST00000325089	human	ensembl	69_37n	+1	known	missense	c.1408	p.E470Q	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300	72	0	0.00	10	5	33.33	-	-	-
SORL1	0	genome.wustl.edu	37	11	121425982	121425982	+	Silent	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	11	121425982	121425982	C	T	SNP	SORL1	ENST00000260197	human	ensembl	69_37n	+1	known	silent	c.2526	p.L842	1.000	smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642	205	0	0.00	47	9	16.07	-	-	-
STAP1	0	genome.wustl.edu	37	4	68459065	68459065	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	4	68459065	68459065	G	A	SNP	STAP1	ENST00000265404	human	ensembl	69_37n	+1	known	missense	c.817	p.E273K	0.932	pfscan_SH2	pfam_SH2,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_SH2	-	no_errors	STAP1	HGNC	ENSG00000035720	160	0	0.00	75	20	21.05	-	-	-
STAU2	0	genome.wustl.edu	37	8	74526082	74526082	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	8	74526082	74526082	C	T	SNP	STAU2	ENST00000524300	human	ensembl	69_37n	-1	known	missense	c.788	p.R263H	0.997	pfam_Ds-RNA-bd,smart_Ds-RNA-bd,pfscan_Ds-RNA-bd	pfam_Ds-RNA-bd,smart_Ds-RNA-bd,pfscan_Ds-RNA-bd	-	no_errors	STAU2	HGNC	ENSG00000040341	188	0	0.00	123	17	12.14	-	-	-
SUZ12	0	genome.wustl.edu	37	17	30315462	30315462	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	17	30315462	30315462	G	A	SNP	SUZ12	ENST00000322652	human	ensembl	69_37n	+1	known	missense	c.1147	p.E383K	1.000	NULL	pfam_Polycomb_protein_VEFS-Box	-	no_errors	SUZ12	HGNC	ENSG00000178691	148	0	0.00	56	14	20.00	-	-	-
SYNE1	0	genome.wustl.edu	37	6	152563452	152563452	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	6	152563452	152563452	G	T	SNP	SYNE1	ENST00000265368	human	ensembl	69_37n	-1	known	missense	c.19816	p.Q6606K	0.000	superfamily_Calpain_domain_III,superfamily_ABC_transptrTM_dom_typ1	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC_transptrTM_dom_typ1,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	281	0	0.00	99	18	15.38	-	-	-
TBC1D8B	0	genome.wustl.edu	37	X	106066621	106066621	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	X	106066621	106066621	C	T	SNP	TBC1D8B	ENST00000357242	human	ensembl	69_37n	+1	known	missense	c.752	p.A251V	1.000	NULL	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_HAND_2,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D8B	HGNC	ENSG00000133138	143	0	0.00	77	13	14.44	-	-	-
TMEM242	0	genome.wustl.edu	37	6	157713934	157713934	+	Nonstop_Mutation	SNP	C	C	G			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	6	157713934	157713934	C	G	SNP	TMEM242	ENST00000400788	human	ensembl	69_37n	-1	known	nonstop	c.425	p.*142S	1.000	NULL	pfam_DUF1358	-	no_errors	TMEM242	HGNC	ENSG00000215712	285	0	0.00	88	27	23.28	-	-	-
TP53	0	genome.wustl.edu	37	17	7577105	7577105	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	17	7577105	7577105	G	A	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.833	p.P278L	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	171	0	0.00	19	16	45.71	-	-	-
TRPV2	0	genome.wustl.edu	37	17	16335539	16335539	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	17	16335539	16335539	C	G	SNP	TRPV2	ENST00000580788	human	ensembl	69_37n	+1	putative	missense	c.160	p.Q54E	1.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	TRPV2	HGNC	ENSG00000187688	72	0	0.00	8	6	42.86	-	-	-
TTN	0	genome.wustl.edu	37	2	179445267	179445267	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	2	179445267	179445267	C	T	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	missense	c.59135	p.R19712K	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	144	0	0.00	55	12	17.91	-	-	-
USP25	0	genome.wustl.edu	37	21	17177479	17177479	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	21	17177479	17177479	C	G	SNP	USP25	ENST00000400183	human	ensembl	69_37n	+1	known	missense	c.682	p.L228V	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,pfam_Ubiquitin-int_motif,superfamily_UBA-like,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif,pfscan_Peptidase_C19	-	no_errors	USP25	HGNC	ENSG00000155313	219	0	0.00	71	17	19.32	-	-	-
VAMP7	0	genome.wustl.edu	37	X	155130211	155130211	+	Silent	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	X	155130211	155130211	C	T	SNP	VAMP7	ENST00000262640	human	ensembl	69_37n	+1	known	silent	c.393	p.A131	1.000	NULL	superfamily_Longin-like_dom,pfscan_Longin_dom	-	no_errors	VAMP7	HGNC	ENSG00000124333	237	0	0.00	72	10	12.20	-	-	-
WDFY3	0	genome.wustl.edu	37	4	85617213	85617213	+	Silent	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	4	85617213	85617213	C	T	SNP	WDFY3	ENST00000295888	human	ensembl	69_37n	-1	known	silent	c.8811	p.E2937	1.000	pfam_BEACH_dom,superfamily_BEACH_dom,pfscan_BEACH_dom	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625	88	0	0.00	33	11	25.00	-	-	-
ZFHX4	0	genome.wustl.edu	37	8	77616868	77616868	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	8	77616868	77616868	C	T	SNP	ZFHX4	ENST00000521891	human	ensembl	69_37n	+1	known	missense	c.545	p.S182F	0.998	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeodomain,pfscan_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	95	0	0.00	69	11	13.75	-	-	-
ZFHX4	0	genome.wustl.edu	37	8	77776717	77776717	+	Missense_Mutation	SNP	T	T	A			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	8	77776717	77776717	T	A	SNP	ZFHX4	ENST00000521891	human	ensembl	69_37n	+1	known	missense	c.10767	p.D3589E	1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeodomain,pfscan_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	67	0	0.00	71	8	10.13	-	-	-
ZNF532	0	genome.wustl.edu	37	18	56587811	56587811	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	18	56587811	56587811	G	-	DEL	ZNF532	ENST00000336078	human	ensembl	69_37n	+1	known	frame_shift_del	c.2292	p.D765fs	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF532	HGNC	ENSG00000074657	53	0	0.00	12	2	14.29	-	-	-
