Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ANKRD30BL	0	genome.wustl.edu	37	2	133015299	133015299	+	RNA	SNP	C	C	T			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	2	133015299	133015299	C	T	SNP	ANKRD30BL	ENST00000470729	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	ANKRD30BL	HGNC	ENSG00000163046	36	0	0.00	27	6	17.65	-	-	-
ANKRD36C	0	genome.wustl.edu	37	2	96624383	96624383	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	2	96624383	96624383	G	A	SNP	ANKRD36C	ENST00000456556	human	ensembl	69_37n	-1	known	missense	c.1061	p.S354L	0.018	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD36C	HGNC	ENSG00000174501	105	1	0.94	101	52	33.99	-	-	-
ANKRD7	0	genome.wustl.edu	37	7	117868028	117868028	+	Silent	SNP	G	G	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	7	117868028	117868028	G	A	SNP	ANKRD7	ENST00000357099	human	ensembl	69_37n	+1	known	silent	c.222	p.P74	0.000	superfamily_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD7	HGNC	ENSG00000106013	62	0	0.00	44	11	20.00	-	-	-
ARAP2	0	genome.wustl.edu	37	4	36160390	36160390	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	4	36160390	36160390	G	T	SNP	ARAP2	ENST00000303965	human	ensembl	69_37n	-1	known	missense	c.2714	p.A905D	0.850	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_SAM_2,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,superfamily_ArfGAP,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP2	HGNC	ENSG00000047365	36	0	0.00	36	4	10.00	-	-	-
ATXN7	0	genome.wustl.edu	37	3	63898572	63898572	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	3	63898572	63898572	G	A	SNP	ATXN7	ENST00000398590	human	ensembl	69_37n	+1	known	missense	c.298	p.E100K	1.000	NULL	pfam_SCA7_dom	-	no_errors	ATXN7	HGNC	ENSG00000163635	48	0	0.00	26	4	13.33	-	-	-
BORA	0	genome.wustl.edu	37	13	73321197	73321197	+	Missense_Mutation	SNP	T	T	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	13	73321197	73321197	T	A	SNP	BORA	ENST00000390667	human	ensembl	69_37n	+1	known	missense	c.1430	p.M477K	1.000	NULL	prints_Aurora_borealis_protien	-	no_errors	BORA	HGNC	ENSG00000136122	73	0	0.00	66	15	18.52	-	-	-
BUB3	0	genome.wustl.edu	37	10	124917337	124917337	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	10	124917337	124917337	G	C	SNP	BUB3	ENST00000368865	human	ensembl	69_37n	+1	known	missense	c.358	p.V120L	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	BUB3	HGNC	ENSG00000154473	105	0	0.00	82	27	24.77	-	-	-
CRABP1	0	genome.wustl.edu	37	15	78632841	78632841	+	Splice_Site	SNP	G	G	C			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	15	78632841	78632841	G	C	SNP	CRABP1	ENST00000299529	human	ensembl	69_37n	+1	known	splice_site	c.70+1	e1+1	1.000	-	-	-	no_errors	CRABP1	HGNC	ENSG00000166426	117	0	0	55	18	24.66	-	-	-
CRABP1	0	genome.wustl.edu	37	15	78632841	78632841	+	Splice_Site	SNP	G	G	C			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	15	78632841	78632841	G	C	SNP	CRABP1	ENST00000299529	human	ensembl	69_37n	+1	known	splice_site	c.70+1	e1+1	1.000	-	-	-	no_errors	CRABP1	HGNC	ENSG00000166426	117	0	0.00	55	18	24.66	-	-	-
CXorf64	0	genome.wustl.edu	37	X	125955311	125955311	+	Silent	SNP	G	G	T			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	X	125955311	125955311	G	T	SNP	CXorf64	ENST00000371125	human	ensembl	69_37n	+1	known	silent	c.690	p.P230	0.000	NULL	NULL	-	no_errors	CXorf64	HGNC	ENSG00000183631	123	0	0.00	74	15	16.85	-	-	-
DYSF	0	genome.wustl.edu	37	2	71891438	71891438	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	2	71891438	71891438	C	G	SNP	DYSF	ENST00000413539	human	ensembl	69_37n	+1	known	missense	c.5020	p.L1674V	1.000	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	pfam_C2_Ca-dep,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_MFS_dom_general_subst_transpt,smart_C2_Ca-dep,smart_Peroxin/Ferlin,pfscan_C2_membr_targeting	-	no_errors	DYSF	HGNC	ENSG00000135636	56	0	0.00	32	15	31.91	-	-	-
ENAH	0	genome.wustl.edu	37	1	225707103	225707103	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	1	225707103	225707103	C	G	SNP	ENAH	ENST00000366844	human	ensembl	69_37n	-1	known	missense	c.599	p.R200P	0.457	NULL	pfam_EVH1,pfam_VASP_tetra,smart_EVH1,pfscan_EVH1	-	no_errors	ENAH	HGNC	ENSG00000154380	179	0	0.00	269	32	10.63	-	-	-
FAM19A4	0	genome.wustl.edu	37	3	68788351	68788351	+	Splice_Site	SNP	C	C	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	3	68788351	68788351	C	A	SNP	FAM19A4	ENST00000295569	human	ensembl	69_37n	-1	known	splice_site	c.287-1	e4-1	1.000	-	-	-	no_errors	FAM19A4	HGNC	ENSG00000163377	90	0	0.00	56	13	18.84	-	-	-
GEN1	0	genome.wustl.edu	37	2	17941357	17941357	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	2	17941357	17941357	G	A	SNP	GEN1	ENST00000317402	human	ensembl	69_37n	+1	known	missense	c.147	p.M49I	0.953	pfam_XPG_DNA_repair_N,smart_XPG_DNA_repair_N	pfam_XPG/RAD2_endonuclease,pfam_XPG_DNA_repair_N,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG/RAD2_endonuclease,smart_HhH2,prints_XPGC_Rad_DNA_repair	-	no_errors	GEN1	HGNC	ENSG00000178295	79	0	0.00	57	10	14.93	-	-	-
HTR2C	0	genome.wustl.edu	37	X	114141666	114141666	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	X	114141666	114141666	G	T	SNP	HTR2C	ENST00000276198	human	ensembl	69_37n	+1	known	missense	c.1065	p.W355C	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_5HT2C_rcpt,prints_7TM_GPCR_Rhodpsn,prints_5HT_rcpt	-	no_errors	HTR2C	HGNC	ENSG00000147246	62	0	0.00	35	11	23.91	-	-	-
INTS4L2	0	genome.wustl.edu	37	7	65150713	65150714	+	RNA	INS	-	-	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	7	65150713	65150714	-	A	INS	INTS4L2	ENST00000430126	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000:0.995	-	-	-	no_errors	INTS4L2	HGNC	ENSG00000232270	8	0	0.00	3	4	57.14	-	-	-
KIAA0196	0	genome.wustl.edu	37	8	126073417	126073417	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	8	126073417	126073417	G	A	SNP	KIAA0196	ENST00000523273	human	ensembl	69_37n	-1	putative	missense	c.278	p.S93L	1.000	pfam_WASH_strumpellin	pfam_WASH_strumpellin	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	KIAA0196	HGNC	ENSG00000164961	28	0	0.00	24	41	63.08	-	-	-
KIAA1024	0	genome.wustl.edu	37	15	79750273	79750273	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	15	79750273	79750273	G	C	SNP	KIAA1024	ENST00000305428	human	ensembl	69_37n	+1	known	missense	c.1784	p.S595T	1.000	NULL	pfam_UPF0258	-	no_errors	KIAA1024	HGNC	ENSG00000169330	45	0	0.00	25	5	16.67	-	-	-
LINC00326	0	genome.wustl.edu	37	6	133427343	133427343	+	RNA	SNP	T	T	G			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	6	133427343	133427343	T	G	SNP	LINC00326	ENST00000457339	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00326	HGNC	ENSG00000231023	41	0	0.00	62	16	20.51	-	-	-
MUC16	0	genome.wustl.edu	37	19	9027223	9027223	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	19	9027223	9027223	G	T	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	missense	c.36663	p.S12221R	0.003	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	77	0	0.00	48	14	22.58	-	-	-
NLRP4	0	genome.wustl.edu	37	19	56370215	56370215	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	19	56370215	56370215	G	T	SNP	NLRP4	ENST00000301295	human	ensembl	69_37n	+1	known	missense	c.1456	p.A486S	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP4	HGNC	ENSG00000160505	57	0	0.00	33	12	26.67	-	-	-
OR5K4	0	genome.wustl.edu	37	3	98072873	98072873	+	Missense_Mutation	SNP	T	T	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	3	98072873	98072873	T	A	SNP	OR5K4	ENST00000354924	human	ensembl	69_37n	+1	known	missense	c.176	p.M59K	1.000	pfam_7TM_GPCR_Rhodpsn,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR5K4	HGNC	ENSG00000196098	93	0	0.00	38	48	55.81	-	-	-
OTOA	0	genome.wustl.edu	37	16	21771829	21771829	+	Silent	SNP	C	C	T			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	16	21771829	21771829	C	T	SNP	OTOA	ENST00000286149	human	ensembl	69_37n	+1	known	silent	c.3430	p.L1144	0.750	NULL	NULL	-	no_errors	OTOA	HGNC	ENSG00000155719	125	0	0.00	98	40	28.99	-	-	-
OTOA	0	genome.wustl.edu	37	16	21771830	21771830	+	Missense_Mutation	SNP	T	T	G			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	16	21771830	21771830	T	G	SNP	OTOA	ENST00000286149	human	ensembl	69_37n	+1	known	missense	c.3431	p.L1144R	0.836	NULL	NULL	-	no_errors	OTOA	HGNC	ENSG00000155719	125	0	0.00	97	39	28.68	-	-	-
PCDHB12	0	genome.wustl.edu	37	5	140590534	140590534	+	Silent	SNP	G	G	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	5	140590534	140590534	G	A	SNP	PCDHB12	ENST00000239450	human	ensembl	69_37n	+1	known	silent	c.2055	p.S685	0.012	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB12	HGNC	ENSG00000120328	216	0	0.00	100	56	35.90	-	-	-
PCDP1	0	genome.wustl.edu	37	2	120303820	120303820	+	Missense_Mutation	SNP	A	A	T			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	2	120303820	120303820	A	T	SNP	PCDP1	ENST00000413369	human	ensembl	69_37n	+1	known	missense	c.113	p.E38V	0.996	NULL	NULL	-	no_errors	AC069154.2	Clone_based_vega_gene	ENSG00000163075	12	0	0.00	5	6	54.55	-	-	-
PDCD11	0	genome.wustl.edu	37	10	105173781	105173781	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	10	105173781	105173781	A	G	SNP	PDCD11	ENST00000369797	human	ensembl	69_37n	+1	known	missense	c.1244	p.N415S	0.689	superfamily_NA-bd_OB-fold-like,smart_RNA-binding_domain_S1,pfscan_Rbsml_prot_S1_RNA-bd_dom	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Suf,superfamily_NA-bd_OB-fold-like,smart_RNA-binding_domain_S1,smart_HAT,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,prints_Ribosomal_S1	-	no_errors	PDCD11	HGNC	ENSG00000148843	95	0	0.00	62	36	36.73	-	-	-
PI16	0	genome.wustl.edu	37	6	36930968	36930968	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	6	36930968	36930968	G	A	SNP	PI16	ENST00000373674	human	ensembl	69_37n	+1	known	missense	c.850	p.V284I	0.000	NULL	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	-	no_errors	PI16	HGNC	ENSG00000164530	84	0	0.00	91	22	19.47	-	-	-
PPM1N	0	genome.wustl.edu	37	19	46002919	46002919	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	19	46002919	46002919	G	T	SNP	PPM1N	ENST00000324688	human	ensembl	69_37n	+1	known	missense	c.955	p.G319W	0.006	NULL	pfam_PP2C-like,superfamily_PP2C-like,smart_PP2C-like	-	no_errors	PPM1N	HGNC	ENSG00000213889	93	0	0.00	96	22	18.64	-	-	-
PRPF31	0	genome.wustl.edu	37	19	54627965	54627965	+	Missense_Mutation	SNP	T	T	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	19	54627965	54627965	T	A	SNP	PRPF31	ENST00000321030	human	ensembl	69_37n	+1	known	missense	c.785	p.F262Y	1.000	pfam_SnoRNA-bd_dom	pfam_SnoRNA-bd_dom,pfam_Prp31_C,pfam_NOSIC,smart_NOSIC	-	no_errors	PRPF31	HGNC	ENSG00000105618	176	0	0.00	52	34	39.53	-	-	-
PTPRT	0	genome.wustl.edu	37	20	41306714	41306714	+	Silent	SNP	G	G	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	20	41306714	41306714	G	A	SNP	PTPRT	ENST00000373198	human	ensembl	69_37n	-1	known	silent	c.945	p.I315	0.209	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090	116	0	0.00	103	19	15.57	-	-	-
REXO1	0	genome.wustl.edu	37	19	1827048	1827050	+	In_Frame_Del	DEL	TGG	TGG	-			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	TGG	TGG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	19	1827048	1827050	TGG	-	DEL	REXO1	ENST00000170168	human	ensembl	69_37n	-1	known	in_frame_del	c.1740_1738	p.P580in_frame_del	0.000:0.001:0.001	NULL	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	REXO1	HGNC	ENSG00000079313	11	0	0.00	4	2	33.33	-	-	-
RHNO1	0	genome.wustl.edu	37	12	2997172	2997172	+	Silent	SNP	C	C	T			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	12	2997172	2997172	C	T	SNP	RHNO1	ENST00000489288	human	ensembl	69_37n	+1	known	silent	c.264	p.T88	0.000	NULL	NULL	-	no_errors	RHNO1	HGNC	ENSG00000171792	56	0	0.00	42	6	12.50	-	-	-
SKIV2L2	0	genome.wustl.edu	37	5	54642950	54642950	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	5	54642950	54642950	G	A	SNP	SKIV2L2	ENST00000230640	human	ensembl	69_37n	+1	known	missense	c.1218	p.M406I	1.000	pirsf_RNA_helicase_ATP-dep_SK12/DOB1,pfscan_Helicase_C	pfam_DSH_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,pirsf_RNA_helicase_ATP-dep_SK12/DOB1,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SKIV2L2	HGNC	ENSG00000039123	41	0	0.00	29	4	12.12	-	-	-
SLC4A11	0	genome.wustl.edu	37	20	3209991	3209991	+	Splice_Site	SNP	C	C	T			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	20	3209991	3209991	C	T	SNP	SLC4A11	ENST00000380059	human	ensembl	69_37n	-1	known	splice_site	c.1978+1	e15+1	1.000	-	-	-	no_errors	SLC4A11	HGNC	ENSG00000088836	73	0	0.00	37	36	48.65	-	-	-
SYNDIG1	0	genome.wustl.edu	37	20	24524032	24524032	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	20	24524032	24524032	G	A	SNP	SYNDIG1	ENST00000376862	human	ensembl	69_37n	+1	known	missense	c.299	p.R100H	0.155	NULL	pfam_Interferon-induced_TM_protein	-	no_errors	SYNDIG1	HGNC	ENSG00000101463	69	0	0.00	50	7	12.28	-	-	-
TMEM132C	0	genome.wustl.edu	37	12	129180412	129180412	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	12	129180412	129180412	C	T	SNP	TMEM132C	ENST00000435159	human	ensembl	69_37n	+1	known	missense	c.1693	p.R565W	0.828	NULL	NULL	-	no_errors	TMEM132C	HGNC	ENSG00000181234	87	0	0.00	43	15	25.86	-	-	-
TP53	0	genome.wustl.edu	37	17	7579355	7579355	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	17	7579355	7579355	A	G	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.332	p.L111P	0.684	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	80	0	0.00	20	41	67.21	-	-	-
TRPV5	0	genome.wustl.edu	37	7	142605793	142605793	+	Missense_Mutation	SNP	A	A	T			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	7	142605793	142605793	A	T	SNP	TRPV5	ENST00000265310	human	ensembl	69_37n	-1	known	missense	c.2077	p.S693T	0.993	prints_TRPV5_channel,tigrfam_TRP_channel	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV5/TRPV6_channel,prints_TRPV5_channel,prints_Ankyrin_rpt,tigrfam_TRP_channel	-	no_errors	TRPV5	HGNC	ENSG00000127412	71	0	0.00	55	14	20.29	-	-	-
TTC28	0	genome.wustl.edu	37	22	28378267	28378267	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	22	28378267	28378267	G	A	SNP	TTC28	ENST00000397906	human	ensembl	69_37n	-1	novel	missense	c.7388	p.S2463F	0.944	NULL	pfam_TPR-1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC28	HGNC	ENSG00000100154	93	0	0.00	47	29	37.66	-	-	-
TUBGCP2	0	genome.wustl.edu	37	10	135113636	135113636	+	RNA	SNP	A	A	T			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	10	135113636	135113636	A	T	SNP	TUBGCP2	ENST00000487796	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	TUBGCP2	HGNC	ENSG00000130640	28	0	0.00	45	15	25.00	-	-	-
ZNF536	0	genome.wustl.edu	37	19	30935398	30935398	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	19	30935398	30935398	C	T	SNP	ZNF536	ENST00000355537	human	ensembl	69_37n	+1	known	missense	c.929	p.S310L	1.000	smart_Znf_C2H2-like	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597	87	0	0.00	51	34	40.00	-	-	-
ZNF784	0	genome.wustl.edu	37	19	56133136	56133136	+	Frame_Shift_Del	DEL	T	T	-			TCGA-A2-A3XX-01A-21D-A23C-09	TCGA-A2-A3XX-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c67409b2-ac25-42a0-8543-4636ef132fe4	e96d5811-4736-40dd-966d-e0e172aeb0af	19	56133136	56133136	T	-	DEL	ZNF784	ENST00000325351	human	ensembl	69_37n	-1	known	frame_shift_del	c.953	p.K318fs	0.113	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF784	HGNC	ENSG00000179922	42	0	0.00	13	2	13.33	-	-	-
