Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADAMTS15	0	genome.wustl.edu	37	11	130343335	130343335	+	Silent	SNP	C	C	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	11	130343335	130343335	C	T	SNP	ADAMTS15	ENST00000299164	human	ensembl	69_37n	+1	known	silent	c.2472	p.S824	0.920	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS,prints_Pept_M12B_ADAM-TS8	-	no_errors	ADAMTS15	HGNC	ENSG00000166106	28	0	0.00	16	7	30.43	-	-	-
ARID1A	0	genome.wustl.edu	37	1	27094455	27094456	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	1	27094455	27094456	TA	-	DEL	ARID1A	ENST00000324856	human	ensembl	69_37n	+1	known	frame_shift_del	c.3163_3164	p.Y1055fs	1.000:1.000	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713	123	0	0.00	101	43	29.86	-	-	-
C17orf76-AS1	0	genome.wustl.edu	37	17	16344474	16344475	+	RNA	INS	-	-	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	17	16344474	16344475	-	T	INS	C17orf76-AS1	ENST00000460249	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	C17orf76-AS1	HGNC	ENSG00000175061	84	0	0.00	70	33	32.04	-	-	-
CADPS	0	genome.wustl.edu	37	3	62578366	62578366	+	Silent	SNP	C	C	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	3	62578366	62578366	C	T	SNP	CADPS	ENST00000383710	human	ensembl	69_37n	-1	known	silent	c.1383	p.K461	1.000	superfamily_C2_Ca/lipid-bd_dom_CaLB	pfam_Ca-dep_secretion_activator,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	CADPS	HGNC	ENSG00000163618	220	0	0.00	90	42	31.82	-	-	-
CCDC108	0	genome.wustl.edu	37	2	219892686	219892687	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	2	219892686	219892687	-	G	INS	CCDC108	ENST00000341552	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1897_1896	p.M632fs	1.000:1.000	NULL	superfamily_PapD-like,pfscan_Major_sperm	-	no_errors	CCDC108	HGNC	ENSG00000181378	48	0	0.00	26	4	13.33	-	-	-
CCNL2	0	genome.wustl.edu	37	1	1325651	1325652	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	1	1325651	1325652	-	G	INS	CCNL2	ENST00000400809	human	ensembl	69_37n	-1	known	frame_shift_ins	c.965_964	p.V322fs	0.000:0.000	pirsf_Cyclin_L	pfam_Cyclin_N,pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_L	-	no_errors	CCNL2	HGNC	ENSG00000221978	54	0	0.00	58	37	38.95	-	-	-
CCR10	0	genome.wustl.edu	37	17	40832609	40832609	+	Frame_Shift_Del	DEL	A	A	-			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	17	40832609	40832609	A	-	DEL	CCR10	ENST00000332438	human	ensembl	69_37n	-1	known	frame_shift_del	c.51	p.D17fs	0.000	prints_Chemokine_CCR10	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Chemokine_CCR10,prints_7TM_GPCR_Rhodpsn,prints_Chemokine_rcpt	-	no_errors	CCR10	HGNC	ENSG00000184451	17	0	0.00	3	56	93.33	-	-	-
CRTC2	0	genome.wustl.edu	37	1	153927365	153927365	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	1	153927365	153927365	C	T	SNP	CRTC2	ENST00000368633	human	ensembl	69_37n	-1	known	missense	c.356	p.R119H	1.000	NULL	NULL	-	no_errors	CRTC2	HGNC	ENSG00000160741	72	0	0.00	59	23	27.71	-	-	-
DHX32	0	genome.wustl.edu	37	10	127529507	127529509	+	In_Frame_Del	DEL	CCA	CCA	-			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	CCA	CCA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	10	127529507	127529509	CCA	-	DEL	DHX32	ENST00000284690	human	ensembl	69_37n	-1	known	in_frame_del	c.1602_1600	p.W534in_frame_del	0.612:0.621:0.423	pfam_Helicase-assoc_dom,smart_Helicase-assoc_dom	pfam_Helicase-assoc_dom,pfam_DUF1605,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd	-	no_errors	DHX32	HGNC	ENSG00000089876	114	0	0.00	125	30	18.99	-	-	-
DOCK8	0	genome.wustl.edu	37	9	377063	377063	+	Silent	SNP	C	C	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	9	377063	377063	C	T	SNP	DOCK8	ENST00000453981	human	ensembl	69_37n	+1	known	silent	c.2292	p.I764	1.000	NULL	pfam_DOCK,pfam_DUF3398,superfamily_ARM-type_fold	-	no_errors	DOCK8	HGNC	ENSG00000107099	29	0	0.00	51	11	17.74	-	-	-
FRG1B	0	genome.wustl.edu	37	20	29612263	29612263	+	RNA	SNP	G	G	A			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	20	29612263	29612263	G	A	SNP	FRG1B	ENST00000482423	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FRG1B	HGNC	ENSG00000149531	8	0	0.00	1	4	80.00	-	-	-
FRY	0	genome.wustl.edu	37	13	32783135	32783135	+	Silent	SNP	C	C	G			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	13	32783135	32783135	C	G	SNP	FRY	ENST00000380250	human	ensembl	69_37n	+1	known	silent	c.4164	p.V1388	0.712	NULL	superfamily_ARM-type_fold	-	no_errors	FRY	HGNC	ENSG00000073910	103	0	0.00	65	16	19.75	-	-	-
FTSJD2	0	genome.wustl.edu	37	6	37427448	37427448	+	Silent	SNP	G	G	A			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	6	37427448	37427448	G	A	SNP	FTSJD2	ENST00000373451	human	ensembl	69_37n	+1	known	silent	c.1083	p.L361	1.000	pfam_rRNA_MeTrfase_FtsJ_dom	pfam_rRNA_MeTrfase_FtsJ_dom,pfam_G_patch_dom,smart_G_patch_dom,smart_WW_Rsp5_WWP,pfscan_G_patch_dom	-	no_errors	FTSJD2	HGNC	ENSG00000137200	634	0	0.00	404	128	24.06	-	-	-
GNB3	0	genome.wustl.edu	37	12	6952645	6952645	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	12	6952645	6952645	G	A	SNP	GNB3	ENST00000229264	human	ensembl	69_37n	+1	known	missense	c.386	p.R129H	0.996	superfamily_WD40_repeat_dom,pirsf_Guanine_nucleotide-bd_bsu,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Guanine_nucleotide-bd_bsu,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Gprotein_B,prints_G-protein_beta_WD-40_rep	-	no_errors	GNB3	HGNC	ENSG00000111664	115	0	0.00	78	11	12.36	-	-	-
HCCS	0	genome.wustl.edu	37	X	11136711	11136711	+	Silent	SNP	G	G	A			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	X	11136711	11136711	G	A	SNP	HCCS	ENST00000321143	human	ensembl	69_37n	+1	known	silent	c.492	p.E164	1.000	pfam_Cyt_C/C1_haem_lyase	pfam_Cyt_C/C1_haem_lyase	-	no_errors	HCCS	HGNC	ENSG00000004961	313	0	0.00	201	36	15.19	-	-	-
HEATR3	0	genome.wustl.edu	37	16	50102690	50102690	+	Splice_Site	SNP	G	G	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	16	50102690	50102690	G	T	SNP	HEATR3	ENST00000299192	human	ensembl	69_37n	+1	known	splice_site	c.312-1	e3-1	1.000	-	-	-	no_errors	HEATR3	HGNC	ENSG00000155393	216	0	0.00	128	15	10.49	-	-	-
HUWE1	0	genome.wustl.edu	37	X	53579640	53579640	+	Frame_Shift_Del	DEL	C	C	-			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	X	53579640	53579640	C	-	DEL	HUWE1	ENST00000262854	human	ensembl	69_37n	-1	known	frame_shift_del	c.8709	p.S2904fs	0.018	NULL	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/transl_elong_EF1B_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758	184	0	0.00	223	159	41.41	-	-	-
HUWE1	0	genome.wustl.edu	37	X	53579644	53579645	+	Frame_Shift_Del	DEL	CC	CC	-			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	CC	CC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	X	53579644	53579645	CC	-	DEL	HUWE1	ENST00000262854	human	ensembl	69_37n	-1	known	frame_shift_del	c.8705_8704	p.G2902fs	0.708:0.481	NULL	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/transl_elong_EF1B_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758	175	0	0.00	214	159	42.63	-	-	-
HUWE1	0	genome.wustl.edu	37	X	53579648	53579649	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	X	53579648	53579649	-	C	INS	HUWE1	ENST00000262854	human	ensembl	69_37n	-1	known	frame_shift_ins	c.8701_8700	p.Q2900fs	0.854:0.001	NULL	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/transl_elong_EF1B_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758	161	0	0.00	216	162	42.86	-	-	-
INTS5	0	genome.wustl.edu	37	11	62414499	62414499	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	11	62414499	62414499	C	T	SNP	INTS5	ENST00000330574	human	ensembl	69_37n	-1	known	missense	c.3053	p.G1018E	1.000	NULL	NULL	-	no_errors	INTS5	HGNC	ENSG00000185085	85	0	0.00	18	9	33.33	-	-	-
ITGA11	0	genome.wustl.edu	37	15	68654007	68654007	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	15	68654007	68654007	G	T	SNP	ITGA11	ENST00000315757	human	ensembl	69_37n	-1	known	missense	c.393	p.S131R	0.999	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA11	HGNC	ENSG00000137809	21	0	0.00	13	6	31.58	-	-	-
KIF13B	0	genome.wustl.edu	37	8	29006116	29006117	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	8	29006116	29006117	-	C	INS	KIF13B	ENST00000524189	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1791_1790	p.M598fs	1.000:1.000	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_CAP-Gly_domain,pfam_KIF1B,pfam_FHA_dom,superfamily_CAP-Gly_domain,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_CAP-Gly_domain,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13B	HGNC	ENSG00000197892	54	0	0.00	69	10	12.66	-	-	-
KIF3C	0	genome.wustl.edu	37	2	26203790	26203791	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	2	26203790	26203791	-	C	INS	KIF3C	ENST00000264712	human	ensembl	69_37n	-1	known	frame_shift_ins	c.997_996	p.N332fs	0.997:0.009	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF3C	HGNC	ENSG00000084731	30	0	0.00	18	2	10.00	-	-	-
KIFAP3	0	genome.wustl.edu	37	1	170004659	170004659	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	1	170004659	170004659	C	T	SNP	KIFAP3	ENST00000361580	human	ensembl	69_37n	-1	known	missense	c.553	p.E185K	1.000	NULL	superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	KIFAP3	HGNC	ENSG00000075945	137	0	0.00	55	24	30.38	-	-	-
MARCKS	0	genome.wustl.edu	37	6	114181729	114181730	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	6	114181729	114181730	-	C	INS	MARCKS	ENST00000368635	human	ensembl	69_37n	+1	known	frame_shift_ins	c.973_974	p.A328fs	1.000:0.999	pfam_MARCKS	pfam_MARCKS,prints_MARCKS	-	no_errors	MARCKS	HGNC	ENSG00000155130	32	0	0.00	14	2	12.50	-	-	-
MED23	0	genome.wustl.edu	37	6	131911508	131911508	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	6	131911508	131911508	G	A	SNP	MED23	ENST00000368058	human	ensembl	69_37n	-1	known	missense	c.3779	p.P1260L	1.000	pfam_Mediator_Med23	pfam_Mediator_Med23	-	no_errors	MED23	HGNC	ENSG00000112282	134	0	0.00	36	13	26.53	-	-	-
MED26	0	genome.wustl.edu	37	19	16687548	16687548	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	19	16687548	16687548	G	T	SNP	MED26	ENST00000263390	human	ensembl	69_37n	-1	known	missense	c.1093	p.P365T	0.097	NULL	pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	-	no_errors	MED26	HGNC	ENSG00000105085	10	0	0.00	7	16	69.57	-	-	-
MEGF11	0	genome.wustl.edu	37	15	66273125	66273126	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	15	66273125	66273126	-	G	INS	MEGF11	ENST00000409699	human	ensembl	69_37n	-1	known	frame_shift_ins	c.753_752	p.G252fs	0.995:1.000	pfam_EGF_extracell,smart_EGF-like,smart_EGF_laminin,pfscan_EG-like_dom	pfam_EGF_laminin,pfam_EGF_extracell,smart_EGF-like,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_EMI_domain	-	no_errors	MEGF11	HGNC	ENSG00000157890	12	0	0.00	4	3	42.86	-	-	-
MEPCE	0	genome.wustl.edu	37	7	100029247	100029248	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	7	100029247	100029248	-	C	INS	MEPCE	ENST00000310512	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1606_1607	p.Q538fs	1.000:1.000	NULL	pfam_Bin3	-	no_errors	MEPCE	HGNC	ENSG00000146834	11	0	0.00	4	2	33.33	-	-	-
MUC16	0	genome.wustl.edu	37	19	8993436	8993436	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	19	8993436	8993436	G	T	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	missense	c.41653	p.L13885M	0.000	pfam_SEA	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	380	1	0.26	419	154	26.88	-	-	-
OR2A1	0	genome.wustl.edu	37	7	144015841	144015841	+	Silent	SNP	G	G	A			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	7	144015841	144015841	G	A	SNP	OR2A1	ENST00000408951	human	ensembl	69_37n	+1	known	silent	c.624	p.G208	0.000	pfam_7TM_GPCR_Rhodpsn,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR2A1	HGNC	ENSG00000221970	14	0	0.00	13	5	27.78	-	-	-
PCDH9	0	genome.wustl.edu	37	13	67802470	67802470	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	13	67802470	67802470	G	C	SNP	PCDH9	ENST00000377865	human	ensembl	69_37n	-1	known	missense	c.103	p.P35A	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH9	HGNC	ENSG00000184226	118	0	0.00	81	18	18.18	-	-	-
PCDHGB3	0	genome.wustl.edu	37	5	140750139	140750139	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	5	140750139	140750139	G	T	SNP	PCDHGB3	ENST00000576222	human	ensembl	69_37n	+1	known	missense	c.178	p.D60Y	0.007	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHGB3	HGNC	ENSG00000262209	104	0	0.00	44	9	16.98	-	-	-
PREB	0	genome.wustl.edu	37	2	27356186	27356186	+	Frame_Shift_Del	DEL	A	A	-			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	2	27356186	27356186	A	-	DEL	PREB	ENST00000260643	human	ensembl	69_37n	-1	known	frame_shift_del	c.345	p.R116fs	0.918	NULL	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	PREB	HGNC	ENSG00000138073	87	0	0.00	58	36	37.11	-	-	-
RAB15	0	genome.wustl.edu	37	14	65417692	65417695	+	Frame_Shift_Del	DEL	AAAG	AAAG	-			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	AAAG	AAAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	14	65417692	65417695	AAAG	-	DEL	RAB15	ENST00000267512	human	ensembl	69_37n	-1	known	frame_shift_del	c.424_421	p.L141fs	0.000:0.001:0.000:0.000	smart_Small_GTPase_Ras,smart_Small_GTPase_Rho,smart_Ran_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB15	HGNC	ENSG00000139998	21	0	0.00	28	13	30.95	-	-	-
RIMBP3	0	genome.wustl.edu	37	22	20457060	20457060	+	Silent	SNP	C	C	G			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	22	20457060	20457060	C	G	SNP	RIMBP3	ENST00000426804	human	ensembl	69_37n	-1	known	silent	c.4242	p.V1414	0.000	NULL	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	RIMBP3	HGNC	ENSG00000196622	8	0	0.00	2	7	77.78	-	-	-
SLC7A14	0	genome.wustl.edu	37	3	170201117	170201117	+	Silent	SNP	G	G	A			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	3	170201117	170201117	G	A	SNP	SLC7A14	ENST00000231706	human	ensembl	69_37n	-1	known	silent	c.1101	p.D367	1.000	pfam_AA-permease_dom	pfam_AA-permease_dom	-	no_errors	SLC7A14	HGNC	ENSG00000013293	91	0	0.00	121	25	17.01	-	-	-
SON	0	genome.wustl.edu	37	21	34925625	34925627	+	In_Frame_Del	DEL	CGG	CGG	-			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	CGG	CGG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	21	34925625	34925627	CGG	-	DEL	SON	ENST00000356577	human	ensembl	69_37n	+1	known	in_frame_del	c.4088_4090	p.A1364in_frame_del	0.001:0.000:0.002	NULL	pfam_G_patch_dom,superfamily_WD40_repeat_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_Ds-RNA-bd	-	no_errors	SON	HGNC	ENSG00000159140	33	0	0.00	28	28	50.00	-	-	-
SPATC1	0	genome.wustl.edu	37	8	145095485	145095486	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	8	145095485	145095486	-	C	INS	SPATC1	ENST00000377470	human	ensembl	69_37n	+1	known	frame_shift_ins	c.783_784	p.Q263fs	0.013:0.003	NULL	NULL	-	no_errors	SPATC1	HGNC	ENSG00000186583	17	0	0.00	19	3	13.64	-	-	-
SPTBN4	0	genome.wustl.edu	37	19	41021284	41021284	+	Silent	SNP	C	C	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	19	41021284	41021284	C	T	SNP	SPTBN4	ENST00000352632	human	ensembl	69_37n	+1	known	silent	c.2832	p.V944	0.815	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN4	HGNC	ENSG00000160460	19	0	0.00	10	7	41.18	-	-	-
SSRP1	0	genome.wustl.edu	37	11	57099870	57099870	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	11	57099870	57099870	G	T	SNP	SSRP1	ENST00000278412	human	ensembl	69_37n	-1	known	missense	c.859	p.L287M	1.000	pfam_SSRP1_dom	pfam_SSRP1_dom,pfam_DUF1747,pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily,prints_SSrcognition	-	no_errors	SSRP1	HGNC	ENSG00000149136	55	0	0.00	236	34	12.59	-	-	-
TMEM151A	0	genome.wustl.edu	37	11	66061808	66061809	+	Frame_Shift_Ins	INS	-	-	TG			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	11	66061808	66061809	-	TG	INS	TMEM151A	ENST00000327259	human	ensembl	69_37n	+1	known	frame_shift_ins	c.91_92	p.Q31fs	1.000:1.000	NULL	NULL	-	no_errors	TMEM151A	HGNC	ENSG00000179292	15	0	0.00	13	5	27.78	-	-	-
TMEM71	0	genome.wustl.edu	37	8	133764157	133764157	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	8	133764157	133764157	C	T	SNP	TMEM71	ENST00000356838	human	ensembl	69_37n	-1	known	missense	c.188	p.R63Q	1.000	NULL	NULL	-	no_errors	TMEM71	HGNC	ENSG00000165071	248	0	0.00	269	111	28.98	-	-	-
UBAP1	0	genome.wustl.edu	37	9	34251528	34251529	+	In_Frame_Ins	INS	-	-	CTA			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	9	34251528	34251529	-	CTA	INS	UBAP1	ENST00000545103	human	ensembl	69_37n	+1	known	in_frame_ins	c.1699_1700	p.*567in_frame_insSR	1.000:1.000	NULL	superfamily_UBA-like,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAP1	HGNC	ENSG00000165006	12	0	0.00	15	10	40.00	-	-	-
UMODL1	0	genome.wustl.edu	37	21	43505492	43505492	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	21	43505492	43505492	C	T	SNP	UMODL1	ENST00000400421	human	ensembl	69_37n	+1	known	missense	c.80	p.S27F	0.752	NULL	pfam_EGF-like_Ca-bd,superfamily_Fibronectin_type3	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	UMODL1	HGNC	ENSG00000177398	126	0	0.00	64	16	20.00	-	-	-
WDTC1	0	genome.wustl.edu	37	1	27621107	27621108	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A07J-01A-11W-A019-09	TCGA-A8-A07J-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c8eac36c-c3a7-4c88-b928-832ab279045b	2dae6992-3060-4e22-9383-698c791cd3b1	1	27621107	27621108	-	G	INS	WDTC1	ENST00000319394	human	ensembl	69_37n	+1	known	frame_shift_ins	c.860_861	p.E290fs	1.000:1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,smart_TPR_repeat,pfscan_TPR-contain_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDTC1	HGNC	ENSG00000142784	35	0	0.00	38	5	11.63	-	-	-
