Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ANKK1	0	genome.wustl.edu	37	11	113269854	113269855	+	Frame_Shift_Ins	INS	-	-	CA			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	11	113269854	113269855	-	CA	INS	ANKK1	ENST00000303941	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1163_1164	p.D389fs	0.130:0.247	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_cat_dom,prints_Ankyrin_rpt,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ANKK1	HGNC	ENSG00000170209	61	0	0.00	41	163	79.90	-	-	-
C17orf70	0	genome.wustl.edu	37	17	79514514	79514516	+	In_Frame_Del	DEL	TGT	TGT	-			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	TGT	TGT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	17	79514514	79514516	TGT	-	DEL	C17orf70	ENST00000327787	human	ensembl	69_37n	-1	known	in_frame_del	c.1594_1592	p.N531in_frame_del	0.000:0.228:0.951	NULL	NULL	-	no_errors	C17orf70	HGNC	ENSG00000185504	18	0	0.00	11	27	69.23	-	-	-
CACNA1G	0	genome.wustl.edu	37	17	48669336	48669336	+	Missense_Mutation	SNP	T	T	G			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	17	48669336	48669336	T	G	SNP	CACNA1G	ENST00000359106	human	ensembl	69_37n	+1	known	missense	c.2793	p.N931K	0.993	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1G	HGNC	ENSG00000006283	272	0	0.00	101	12	10.62	-	-	-
CCDC57	0	genome.wustl.edu	37	17	80159705	80159705	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	17	80159705	80159705	G	-	DEL	CCDC57	ENST00000389641	human	ensembl	69_37n	-1	known	frame_shift_del	c.116	p.T39fs	0.002	NULL	NULL	-	no_errors	CCDC57	HGNC	ENSG00000176155	31	0	0.00	25	12	32.43	-	-	-
CD22	0	genome.wustl.edu	37	19	35835800	35835800	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	19	35835800	35835800	G	T	SNP	CD22	ENST00000085219	human	ensembl	69_37n	+1	known	missense	c.2104	p.A702S	0.524	NULL	pfam_Immunoglobulin,pfam_Ig_I-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	CD22	HGNC	ENSG00000012124	115	0	0.00	390	79	16.77	-	-	-
CLK2	0	genome.wustl.edu	37	1	155233103	155233104	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	1	155233103	155233104	-	C	INS	CLK2	ENST00000368361	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1406_1405	p.T469fs	1.000:1.000	pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CLK2	HGNC	ENSG00000176444	131	0	0.00	124	92	42.59	-	-	-
CLK2	0	genome.wustl.edu	37	1	155233108	155233109	+	Frame_Shift_Ins	INS	-	-	T			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	1	155233108	155233109	-	T	INS	CLK2	ENST00000368361	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1401_1400	p.L468fs	0.935:1.000	pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CLK2	HGNC	ENSG00000176444	132	0	0.00	126	92	42.20	-	-	-
CLSTN2	0	genome.wustl.edu	37	3	140122491	140122491	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	3	140122491	140122491	A	T	SNP	CLSTN2	ENST00000458420	human	ensembl	69_37n	+1	known	missense	c.253	p.I85F	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_ConA-like_lec_gl,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CLSTN2	HGNC	ENSG00000158258	134	0	0.00	216	51	19.10	-	-	-
CREB3L1	0	genome.wustl.edu	37	11	46341932	46341932	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	11	46341932	46341932	C	T	SNP	CREB3L1	ENST00000288400	human	ensembl	69_37n	+1	known	missense	c.1376	p.A459V	0.003	NULL	pfam_bZIP_1,pfam_bZIP_2,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_CREB	-	no_errors	CREB3L1	HGNC	ENSG00000157613	124	0	0.00	158	74	31.90	-	-	-
DDR1	0	genome.wustl.edu	37	6	30864625	30864625	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	6	30864625	30864625	G	C	SNP	DDR1	ENST00000376575	human	ensembl	69_37n	+1	known	missense	c.1852	p.E618Q	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	DDR1	HGNC	ENSG00000204580	63	0	0.00	40	9	18.37	-	-	-
EFCAB5	0	genome.wustl.edu	37	17	28419935	28419935	+	Silent	SNP	T	T	G			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	17	28419935	28419935	T	G	SNP	EFCAB5	ENST00000394835	human	ensembl	69_37n	+1	known	silent	c.4302	p.L1434	0.163	NULL	pfscan_EF_HAND_2	-	no_errors	EFCAB5	HGNC	ENSG00000176927	148	0	0.00	237	66	21.71	-	-	-
GALNT11	0	genome.wustl.edu	37	7	151800318	151800318	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	7	151800318	151800318	C	T	SNP	GALNT11	ENST00000320311	human	ensembl	69_37n	+1	known	missense	c.541	p.H181Y	0.285	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT11	HGNC	ENSG00000178234	138	0	0.00	162	61	27.23	-	-	-
HNRNPU	0	genome.wustl.edu	37	1	245027315	245027315	+	Silent	SNP	G	G	A			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	1	245027315	245027315	G	A	SNP	HNRNPU	ENST00000283179	human	ensembl	69_37n	-1	known	silent	c.295	p.L99	0.994	NULL	pfam_SPRY_rcpt,pfam_SAP_DNA-bd,pfam_Zeta_toxin_domain,superfamily_ConA-like_lec_gl,smart_SAP_DNA-bd,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_SAP_DNA-bd	-	no_errors	HNRNPU	HGNC	ENSG00000153187	14	0	0.00	19	6	24.00	-	-	-
ISLR2	0	genome.wustl.edu	37	15	74425335	74425335	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	15	74425335	74425335	G	-	DEL	ISLR2	ENST00000361742	human	ensembl	69_37n	+1	known	frame_shift_del	c.240	p.W81fs	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Ig-like	-	no_errors	ISLR2	HGNC	ENSG00000167178	62	0	0.00	52	23	30.26	-	-	-
KCNE4	0	genome.wustl.edu	37	2	223917604	223917604	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	2	223917604	223917604	G	-	DEL	KCNE4	ENST00000281830	human	ensembl	69_37n	+1	known	frame_shift_del	c.56	p.S19fs	0.005	NULL	pfam_K_chnl_volt-dep_bsu_KCNE,prints_K_chnl_volt-dep_bsu_KCNE	-	no_errors	KCNE4	HGNC	ENSG00000152049	19	0	0.00	6	6	50.00	-	-	-
KCNE4	0	genome.wustl.edu	37	2	223917614	223917615	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	2	223917614	223917615	GT	-	DEL	KCNE4	ENST00000281830	human	ensembl	69_37n	+1	known	frame_shift_del	c.66_67	p.E22fs	0.001:0.003	NULL	pfam_K_chnl_volt-dep_bsu_KCNE,prints_K_chnl_volt-dep_bsu_KCNE	-	no_errors	KCNE4	HGNC	ENSG00000152049	19	0	0.00	8	6	42.86	-	-	-
LAMA5	0	genome.wustl.edu	37	20	60902386	60902387	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	20	60902386	60902387	-	G	INS	LAMA5	ENST00000252999	human	ensembl	69_37n	-1	known	frame_shift_ins	c.5015_5014	p.E1672fs	0.007:0.008	pfscan_Laminin_B_type_IV	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EGF-like,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702	11	0	0.00	6	3	33.33	-	-	-
LAMA5	0	genome.wustl.edu	37	20	60902395	60902395	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	20	60902395	60902395	G	-	DEL	LAMA5	ENST00000252999	human	ensembl	69_37n	-1	known	frame_shift_del	c.5006	p.P1669fs	0.000	pfscan_Laminin_B_type_IV	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EGF-like,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702	9	0	0.00	2	3	60.00	-	-	-
MEFV	0	genome.wustl.edu	37	16	3293331	3293331	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	16	3293331	3293331	C	A	SNP	MEFV	ENST00000219596	human	ensembl	69_37n	-1	known	missense	c.2156	p.G719V	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_DAPIN,pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl,superfamily_DEATH-like,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_DAPIN,pfscan_Znf_B-box,prints_Butyrophylin	-	no_errors	MEFV	HGNC	ENSG00000103313	80	0	0.00	79	12	13.04	-	-	-
MUM1L1	0	genome.wustl.edu	37	X	105449533	105449535	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	X	105449533	105449535	TCT	-	DEL	MUM1L1	ENST00000337685	human	ensembl	69_37n	+1	known	in_frame_del	c.108_110	p.L37in_frame_del	0.001:0.047:0.086	NULL	superfamily_PyrdxlP-dep_Trfase_major_dom	-	no_errors	MUM1L1	HGNC	ENSG00000157502	63	0	0.00	49	90	64.75	-	-	-
NUP210	0	genome.wustl.edu	37	3	13364912	13364912	+	Silent	SNP	C	C	T			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	3	13364912	13364912	C	T	SNP	NUP210	ENST00000254508	human	ensembl	69_37n	-1	known	silent	c.4665	p.Q1555	0.944	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,superfamily_Cadherin-like,smart_Big_2	-	no_errors	NUP210	HGNC	ENSG00000132182	124	0	0.00	97	14	12.61	-	-	-
PCDHB10	0	genome.wustl.edu	37	5	140574447	140574447	+	Silent	SNP	G	G	A			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	5	140574447	140574447	G	A	SNP	PCDHB10	ENST00000239446	human	ensembl	69_37n	+1	known	silent	c.2322	p.S774	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB10	HGNC	ENSG00000120324	74	0	0.00	48	9	15.52	-	-	-
PGF	0	genome.wustl.edu	37	14	75421872	75421873	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	14	75421872	75421873	-	G	INS	PGF	ENST00000405431	human	ensembl	69_37n	-1	known	frame_shift_ins	c.74_73	p.Q25fs	0.671:0.473	NULL	pfam_PD_growth_factor,smart_PD_growth_factor,pfscan_PD_growth_factor	-	no_errors	PGF	HGNC	ENSG00000119630	20	0	0.00	19	3	13.64	-	-	-
POC1B	0	genome.wustl.edu	37	12	89818991	89818991	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	12	89818991	89818991	C	A	SNP	POC1B	ENST00000313546	human	ensembl	69_37n	-1	known	missense	c.1279	p.A427S	0.529	NULL	pfam_WD40_repeat,pfam_TIF2A_beta_prop-like,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	POC1B	HGNC	ENSG00000139323	286	0	0.00	258	48	15.58	-	-	-
PPARD	0	genome.wustl.edu	37	6	35392419	35392419	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	6	35392419	35392419	G	A	SNP	PPARD	ENST00000311565	human	ensembl	69_37n	+1	known	missense	c.941	p.R314H	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_1Cnucl_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_1Cnucl_rcpt,prints_Str_hrmn_rcpt,prints_1Cnucl_rcpt_B,prints_Znf_hrmn_rcpt,prints_1Cnucl_rcpt_A	-	no_errors	PPARD	HGNC	ENSG00000112033	92	0	0.00	66	17	20.48	-	-	-
PSTK	0	genome.wustl.edu	37	10	124745960	124745961	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	10	124745960	124745961	-	C	INS	PSTK	ENST00000405485	human	ensembl	69_37n	+1	known	frame_shift_ins	c.852_853	p.N284fs	0.000:0.000	NULL	pfam_Chromatin_KTI12,tigrfam_L-seryl-tRNA_Sec_kinase_euk	-	no_errors	PSTK	HGNC	ENSG00000179988	34	0	0.00	38	10	20.83	-	-	-
PTPN12	0	genome.wustl.edu	37	7	77210798	77210798	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	7	77210798	77210798	A	T	SNP	PTPN12	ENST00000248594	human	ensembl	69_37n	+1	known	missense	c.263	p.Y88F	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pirsf_Tyr_Pase_non-rcpt_typ-12,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-12,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN12	HGNC	ENSG00000127947	88	0	0.00	86	17	16.35	-	-	-
SKA3	0	genome.wustl.edu	37	13	21742333	21742333	+	Silent	SNP	C	C	A			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	13	21742333	21742333	C	A	SNP	SKA3	ENST00000314759	human	ensembl	69_37n	-1	known	silent	c.537	p.V179	0.000	NULL	NULL	-	no_errors	SKA3	HGNC	ENSG00000165480	105	0	0.00	133	17	11.33	-	-	-
SLC1A6	0	genome.wustl.edu	37	19	15061145	15061145	+	Silent	SNP	G	G	A			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	19	15061145	15061145	G	A	SNP	SLC1A6	ENST00000221742	human	ensembl	69_37n	-1	known	silent	c.1557	p.I519	0.965	pfam_Na-dicarboxylate_symporter	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A6	HGNC	ENSG00000105143	49	0	0.00	36	10	21.74	-	-	-
SLC5A5	0	genome.wustl.edu	37	19	17986885	17986886	+	Frame_Shift_Ins	INS	-	-	T			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	19	17986885	17986886	-	T	INS	SLC5A5	ENST00000222248	human	ensembl	69_37n	+1	known	frame_shift_ins	c.668_669	p.Q224fs	1.000:0.997	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A5	HGNC	ENSG00000105641	93	0	0.00	94	33	25.98	-	-	-
TBC1D10B	0	genome.wustl.edu	37	16	30380863	30380863	+	Silent	SNP	T	T	G			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	16	30380863	30380863	T	G	SNP	TBC1D10B	ENST00000409939	human	ensembl	69_37n	-1	known	silent	c.642	p.S214	0.001	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D10B	HGNC	ENSG00000169221	33	0	0.00	29	12	28.57	-	-	-
TEX264	0	genome.wustl.edu	37	3	51737809	51737809	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	3	51737809	51737809	C	T	SNP	TEX264	ENST00000341333	human	ensembl	69_37n	+1	known	missense	c.719	p.A240V	0.921	NULL	superfamily_Reg_factor_effector_bac	-	no_errors	TEX264	HGNC	ENSG00000164081	41	0	0.00	33	20	37.74	-	-	-
TP53	0	genome.wustl.edu	37	17	7576863	7576863	+	Frame_Shift_Del	DEL	A	A	-			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	17	7576863	7576863	A	-	DEL	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	frame_shift_del	c.983	p.F328fs	1.000	pfam_p53_tetrameristn,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	329	0	0.00	310	41	11.58	-	-	-
TPRG1	0	genome.wustl.edu	37	3	188925280	188925280	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	3	188925280	188925280	C	T	SNP	TPRG1	ENST00000345063	human	ensembl	69_37n	+1	known	missense	c.107	p.P36L	0.001	NULL	pfam_Inositol_phosphatase	-	no_errors	TPRG1	HGNC	ENSG00000188001	250	0	0.00	270	61	18.43	-	-	-
TULP4	0	genome.wustl.edu	37	6	158924160	158924160	+	Silent	SNP	G	G	C			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	6	158924160	158924160	G	C	SNP	TULP4	ENST00000367097	human	ensembl	69_37n	+1	known	silent	c.3465	p.L1155	0.965	NULL	pfam_Tubby_C,pfam_SOCS_C,pfam_WD40_repeat,superfamily_Tubby_C-like,superfamily_WD40_repeat_dom,superfamily_Tumour_necrosis_fac-like,smart_WD40_repeat,smart_SOCS_C,pfscan_SOCS_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TULP4	HGNC	ENSG00000130338	58	0	0.00	38	6	13.64	-	-	-
TXNL1	0	genome.wustl.edu	37	18	54291576	54291576	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	18	54291576	54291576	C	T	SNP	TXNL1	ENST00000586262	human	ensembl	69_37n	-1	novel	missense	c.299	p.S100N	0.998	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_PITH_dom,pfam_Thioredoxin_domain,superfamily_Galactose-bd-like,superfamily_Thioredoxin-like_fold	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	TXNL1	HGNC	ENSG00000091164	154	0	0.00	199	30	13.04	-	-	-
VCPIP1	0	genome.wustl.edu	37	8	67579088	67579089	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	8	67579088	67579089	-	C	INS	VCPIP1	ENST00000310421	human	ensembl	69_37n	-1	known	frame_shift_ins	c.106_105	p.L35fs	1.000:0.991	NULL	pfam_OTU,pfscan_OTU	-	no_errors	VCPIP1	HGNC	ENSG00000175073	16	0	0.00	23	3	11.54	-	-	-
ZNF649	0	genome.wustl.edu	37	19	52400227	52400227	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	19	52400227	52400227	G	A	SNP	ZNF649	ENST00000354957	human	ensembl	69_37n	-1	known	missense	c.20	p.S7L	0.002	superfamily_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF649	HGNC	ENSG00000198093	275	0	0.00	291	66	18.44	-	-	-
