Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ANKMY1	0	genome.wustl.edu	37	2	241468736	241468736	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	2	241468736	241468736	G	A	SNP	ANKMY1	ENST00000272972	human	ensembl	69_37n	-1	known	missense	c.404	p.S135L	0.002	NULL	pfam_Ankyrin_rpt,pfam_MORN,pfam_Znf_MYND,superfamily_Ankyrin_rpt-contain_dom,smart_MORN,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Znf_MYND	-	no_errors	ANKMY1	HGNC	ENSG00000144504	105	0	0.00	78	29	27.10	-	-	-
BAG3	0	genome.wustl.edu	37	10	121429471	121429471	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	10	121429471	121429471	C	T	SNP	BAG3	ENST00000369085	human	ensembl	69_37n	+1	known	missense	c.289	p.P97S	1.000	NULL	pfam_BAG_domain,pfam_WW_Rsp5_WWP,superfamily_WW_Rsp5_WWP,smart_WW_Rsp5_WWP,smart_BAG_domain,pfscan_BAG_domain,pfscan_WW_Rsp5_WWP	-	no_errors	BAG3	HGNC	ENSG00000151929	66	0	0.00	30	14	31.82	-	-	-
CDCA2	0	genome.wustl.edu	37	8	25325771	25325771	+	Missense_Mutation	SNP	T	T	C			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	8	25325771	25325771	T	C	SNP	CDCA2	ENST00000330560	human	ensembl	69_37n	+1	known	missense	c.577	p.F193L	0.000	NULL	NULL	-	no_errors	CDCA2	HGNC	ENSG00000184661	20	0	0.00	57	24	29.63	-	-	-
DTX2P1-UPK3BP1-PMS2P11	0	genome.wustl.edu	37	7	76631509	76631509	+	RNA	SNP	C	C	T			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	7	76631509	76631509	C	T	SNP	DTX2P1-UPK3BP1-PMS2P11	ENST00000579700	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.488	-	-	-	no_errors	DTX2P1-UPK3BP1-PMS2P11	HGNC	ENSG00000265479	10	0	0.00	12	8	40.00	-	-	-
FAM124A	0	genome.wustl.edu	37	13	51855020	51855020	+	Silent	SNP	G	G	C			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	13	51855020	51855020	G	C	SNP	FAM124A	ENST00000280057	human	ensembl	69_37n	+1	known	silent	c.1377	p.S459	0.748	NULL	NULL	-	no_errors	FAM124A	HGNC	ENSG00000150510	19	0	0.00	22	17	43.59	-	-	-
GALNT6	0	genome.wustl.edu	37	12	51771043	51771043	+	Silent	SNP	G	G	A			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	12	51771043	51771043	G	A	SNP	GALNT6	ENST00000356317	human	ensembl	69_37n	-1	known	silent	c.600	p.V200	1.000	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT6	HGNC	ENSG00000139629	121	0	0.00	68	29	29.90	-	-	-
GRIPAP1	0	genome.wustl.edu	37	X	48837669	48837669	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	X	48837669	48837669	C	T	SNP	GRIPAP1	ENST00000376441	human	ensembl	69_37n	-1	known	missense	c.1888	p.E630K	1.000	NULL	superfamily_Prefoldin	-	no_errors	GRIPAP1	HGNC	ENSG00000068400	136	0	0.00	75	31	29.25	-	-	-
HEATR8	0	genome.wustl.edu	37	1	55118602	55118602	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	1	55118602	55118602	G	A	SNP	HEATR8	ENST00000421030	human	ensembl	69_37n	+1	known	missense	c.3	p.M1I	0.901	NULL	superfamily_ARM-type_fold	-	no_errors	HEATR8	HGNC	ENSG00000184313	19	0	0.00	12	16	57.14	-	-	-
IL1R2	0	genome.wustl.edu	37	2	102625086	102625089	+	Frame_Shift_Del	DEL	CAGC	CAGC	-			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	CAGC	CAGC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	2	102625086	102625089	CAGC	-	DEL	IL1R2	ENST00000332549	human	ensembl	69_37n	+1	known	frame_shift_del	c.49_52	p.Q17fs	0.012:0.005:0.008:0.006	NULL	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like,prints_Interleukin-1_rcpt_II,prints_IL1_rcpt_I/II	-	no_errors	IL1R2	HGNC	ENSG00000115590	54	0	0.00	87	37	29.84	-	-	-
IL1R2	0	genome.wustl.edu	37	2	102625095	102625095	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	2	102625095	102625095	G	A	SNP	IL1R2	ENST00000332549	human	ensembl	69_37n	+1	known	missense	c.58	p.A20T	0.082	pfscan_Ig-like	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like,prints_Interleukin-1_rcpt_II,prints_IL1_rcpt_I/II	-	no_errors	IL1R2	HGNC	ENSG00000115590	53	0	0.00	71	41	36.61	-	-	-
KRT18	0	genome.wustl.edu	37	12	53344651	53344651	+	Silent	SNP	C	C	T			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	12	53344651	53344651	C	T	SNP	KRT18	ENST00000388835	human	ensembl	69_37n	+1	known	silent	c.618	p.L206	1.000	pfam_F	pfam_F,prints_Keratin_I	-	no_errors	KRT18	HGNC	ENSG00000111057	15	0	0.00	10	7	41.18	-	-	-
LRRK2	0	genome.wustl.edu	37	12	40714892	40714892	+	Missense_Mutation	SNP	T	T	C			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	12	40714892	40714892	T	C	SNP	LRRK2	ENST00000298910	human	ensembl	69_37n	+1	known	missense	c.5072	p.I1691T	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	14	0	0.00	161	100	38.31	-	-	-
MUC12	0	genome.wustl.edu	37	7	100637074	100637074	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	7	100637074	100637074	G	A	SNP	MUC12	ENST00000379442	human	ensembl	69_37n	+1	known	missense	c.3659	p.R1220H	0.000	NULL	pfam_SEA	-	no_errors	MUC12	HGNC	ENSG00000205277	21	0	0.00	26	9	25.71	-	-	-
NAV3	0	genome.wustl.edu	37	12	78444719	78444719	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	12	78444719	78444719	C	T	SNP	NAV3	ENST00000397909	human	ensembl	69_37n	+1	known	nonsense	c.2308	p.R770*	1.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798	49	0	0.00	48	31	39.24	-	-	-
OR1Q1	0	genome.wustl.edu	37	9	125377610	125377610	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	9	125377610	125377610	G	A	SNP	OR1Q1	ENST00000297913	human	ensembl	69_37n	+1	known	missense	c.594	p.M198I	0.014	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR1Q1	HGNC	ENSG00000165202	92	0	0.00	86	11	11.34	-	-	-
OR2T5	0	genome.wustl.edu	37	1	248652175	248652175	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	1	248652175	248652175	G	A	SNP	OR2T5	ENST00000366473	human	ensembl	69_37n	+1	known	missense	c.286	p.V96I	0.406	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2T5	HGNC	ENSG00000203661	17	0	0.00	51	14	21.54	-	-	-
PACS2	0	genome.wustl.edu	37	14	105856299	105856299	+	Missense_Mutation	SNP	C	C	G			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	14	105856299	105856299	C	G	SNP	PACS2	ENST00000458164	human	ensembl	69_37n	+1	known	missense	c.2035	p.P679A	1.000	pfam_Phosphofurin_acidic_CS-1	pfam_Phosphofurin_acidic_CS-1	-	no_errors	PACS2	HGNC	ENSG00000179364	39	0	0.00	127	38	23.03	-	-	-
PBXIP1	0	genome.wustl.edu	37	1	154918213	154918213	+	Missense_Mutation	SNP	T	T	A			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	1	154918213	154918213	T	A	SNP	PBXIP1	ENST00000368463	human	ensembl	69_37n	-1	known	missense	c.1937	p.D646V	1.000	NULL	NULL	-	no_errors	PBXIP1	HGNC	ENSG00000163346	48	0	0.00	37	35	48.61	-	-	-
PCDH10	0	genome.wustl.edu	37	4	134071406	134071406	+	Silent	SNP	C	C	T			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	4	134071406	134071406	C	T	SNP	PCDH10	ENST00000264360	human	ensembl	69_37n	+1	known	silent	c.111	p.I37	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650	31	0	0.00	52	10	16.13	-	-	-
PHF19	0	genome.wustl.edu	37	9	123629214	123629214	+	Missense_Mutation	SNP	C	C	G			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	9	123629214	123629214	C	G	SNP	PHF19	ENST00000373896	human	ensembl	69_37n	-1	known	missense	c.644	p.R215P	1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD	-	no_errors	PHF19	HGNC	ENSG00000119403	44	0	0.00	10	10	50.00	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178928079	178928079	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	3	178928079	178928079	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1357	p.E453K	1.000	pfam_PI3K_C2_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	11	0	0.00	110	143	56.52	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	3	178936082	178936082	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1624	p.E542K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	8	0	0.00	94	83	46.89	-	-	-
SCARNA12	0	genome.wustl.edu	37	12	7076766	7076766	+	RNA	SNP	C	C	T			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	12	7076766	7076766	C	T	SNP	SCARNA12	ENST00000459155	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.968	-	-	-	no_errors	SCARNA12	HGNC	ENSG00000238795	25	0	0.00	26	14	35.00	-	-	-
SNRNP200	0	genome.wustl.edu	37	2	96964156	96964156	+	Silent	SNP	A	A	G			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	2	96964156	96964156	A	G	SNP	SNRNP200	ENST00000323853	human	ensembl	69_37n	-1	known	silent	c.985	p.L329	1.000	NULL	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SNRNP200	HGNC	ENSG00000144028	42	0	0.00	155	76	32.90	-	-	-
TBC1D3P2	0	genome.wustl.edu	37	17	60342663	60342663	+	RNA	SNP	G	G	A			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	17	60342663	60342663	G	A	SNP	TBC1D3P2	ENST00000339120	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	TBC1D3P2	HGNC	ENSG00000188755	10	0	0.00	6	6	50.00	-	-	-
TBC1D4	0	genome.wustl.edu	37	13	76055696	76055696	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	13	76055696	76055696	C	T	SNP	TBC1D4	ENST00000377636	human	ensembl	69_37n	-1	known	missense	c.208	p.E70K	0.998	smart_PTyr_interaction_dom	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTyr_interaction_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTyr_interaction_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTyr_interaction_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D4	HGNC	ENSG00000136111	15	0	0.00	2	9	81.82	-	-	-
TTC27	0	genome.wustl.edu	37	2	32889484	32889484	+	Missense_Mutation	SNP	A	A	G			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	2	32889484	32889484	A	G	SNP	TTC27	ENST00000317907	human	ensembl	69_37n	+1	known	missense	c.755	p.D252G	1.000	NULL	pfam_TPR_2,pfam_TPR-1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC27	HGNC	ENSG00000018699	9	0	0.00	165	52	23.96	-	-	-
VPS72	0	genome.wustl.edu	37	1	151162528	151162528	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	1	151162528	151162528	C	T	SNP	VPS72	ENST00000368892	human	ensembl	69_37n	-1	known	missense	c.70	p.E24K	1.000	pfam_YL1	pfam_YL1,pfam_YL1_C	-	no_errors	VPS72	HGNC	ENSG00000163159	39	0	0.00	131	47	26.40	-	-	-
ZMYM2	0	genome.wustl.edu	37	13	20641448	20641448	+	Missense_Mutation	SNP	A	A	G			TCGA-AN-A0XO-01A-11D-A10G-09	TCGA-AN-A0XO-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f63863f5-cb60-4961-a5b4-ed5ea1fb3dc8	ea2d9f54-744b-4e56-bc97-d9492168db87	13	20641448	20641448	A	G	SNP	ZMYM2	ENST00000382869	human	ensembl	69_37n	+1	known	missense	c.3371	p.H1124R	1.000	NULL	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH	-	no_errors	ZMYM2	HGNC	ENSG00000121741	11	0	0.00	90	48	34.78	-	-	-
