Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ANKRD16	0	genome.wustl.edu	37	10	5930026	5930026	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	10	5930026	5930026	G	A	SNP	ANKRD16	ENST00000380092	human	ensembl	69_37n	-1	known	missense	c.319	p.P107S	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD16	HGNC	ENSG00000134461	33	0	0.00	24	14	36.84	-	-	-
BARX2	0	genome.wustl.edu	37	11	129306679	129306679	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	11	129306679	129306679	C	T	SNP	BARX2	ENST00000281437	human	ensembl	69_37n	+1	known	missense	c.221	p.S74L	1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	BARX2	HGNC	ENSG00000043039	14	0	0.00	9	6	40.00	-	-	-
CEP120	0	genome.wustl.edu	37	5	122685675	122685675	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	5	122685675	122685675	G	A	SNP	CEP120	ENST00000306467	human	ensembl	69_37n	-1	known	nonsense	c.2689	p.R897*	0.990	NULL	pfam_DUF3668,superfamily_C2_Ca/lipid-bd_dom_CaLB	-	no_errors	CEP120	HGNC	ENSG00000168944	251	0	0.00	194	76	28.15	-	-	-
CYP26B1	0	genome.wustl.edu	37	2	72361955	72361955	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	2	72361955	72361955	C	T	SNP	CYP26B1	ENST00000001146	human	ensembl	69_37n	-1	known	missense	c.796	p.A266T	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_B,prints_Cyt_P450	-	no_errors	CYP26B1	HGNC	ENSG00000003137	37	0	0.00	29	14	32.56	-	-	-
DHX15	0	genome.wustl.edu	37	4	24542562	24542562	+	Missense_Mutation	SNP	A	A	T			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	4	24542562	24542562	A	T	SNP	DHX15	ENST00000336812	human	ensembl	69_37n	-1	known	missense	c.1495	p.Y499N	1.000	pfscan_Helicase_C	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX15	HGNC	ENSG00000109606	147	0	0.00	133	16	10.74	-	-	-
FASTKD3	0	genome.wustl.edu	37	5	7867647	7867647	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	5	7867647	7867647	C	T	SNP	FASTKD3	ENST00000264669	human	ensembl	69_37n	-1	known	missense	c.550	p.A184T	0.993	NULL	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTKD3	HGNC	ENSG00000124279	66	0	0.00	46	8	14.81	-	-	-
FASTKD5	0	genome.wustl.edu	37	20	3127664	3127664	+	Missense_Mutation	SNP	A	A	C			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	20	3127664	3127664	A	C	SNP	FASTKD5	ENST00000380266	human	ensembl	69_37n	-1	known	missense	c.2053	p.C685G	0.000	NULL	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTKD5	HGNC	ENSG00000215251	44	0	0.00	20	17	45.95	-	-	-
FGD5	0	genome.wustl.edu	37	3	14861440	14861440	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	3	14861440	14861440	G	A	SNP	FGD5	ENST00000285046	human	ensembl	69_37n	+1	known	missense	c.862	p.G288R	0.027	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD5	HGNC	ENSG00000154783	23	0	0.00	13	7	35.00	-	-	-
GMDS	0	genome.wustl.edu	37	6	2124961	2124961	+	Missense_Mutation	SNP	C	C	G			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	6	2124961	2124961	C	G	SNP	GMDS	ENST00000380815	human	ensembl	69_37n	-1	known	missense	c.107	p.G36A	1.000	pfam_Epimerase_deHydtase,pfam_dTDP_dehydrorham_reduct,tigrfam_GDP_Man_deHydtase	pfam_Epimerase_deHydtase,pfam_dTDP_dehydrorham_reduct,tigrfam_GDP_Man_deHydtase	-	no_errors	GMDS	HGNC	ENSG00000112699	67	0	0.00	55	20	26.67	-	-	-
HACE1	0	genome.wustl.edu	37	6	105219210	105219210	+	Missense_Mutation	SNP	T	T	A			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	6	105219210	105219210	T	A	SNP	HACE1	ENST00000262903	human	ensembl	69_37n	-1	known	missense	c.2069	p.N690I	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_Ankyrin_rpt,superfamily_HECT,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_HECT,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_HECT,prints_Ankyrin_rpt	-	no_errors	HACE1	HGNC	ENSG00000085382	169	0	0.00	110	35	24.14	-	-	-
HEATR7B2	0	genome.wustl.edu	37	5	41052602	41052602	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	5	41052602	41052602	C	T	SNP	HEATR7B2	ENST00000399564	human	ensembl	69_37n	-1	known	missense	c.1195	p.V399I	0.928	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR7B2	HGNC	ENSG00000171495	106	0	0.00	78	32	29.09	-	-	-
IL17RD	0	genome.wustl.edu	37	3	57139978	57139978	+	Silent	SNP	G	G	A			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	3	57139978	57139978	G	A	SNP	IL17RD	ENST00000296318	human	ensembl	69_37n	-1	known	silent	c.654	p.F218	0.941	NULL	pfam_SEFIR,superfamily_TIR_dom	-	no_errors	IL17RD	HGNC	ENSG00000144730	79	0	0.00	50	18	26.47	-	-	-
INADL	0	genome.wustl.edu	37	1	62274159	62274160	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	1	62274159	62274160	AC	-	DEL	INADL	ENST00000371158	human	ensembl	69_37n	+1	known	frame_shift_del	c.1640_1641	p.Q549fs	0.996:0.507	superfamily_PDZ	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_L27,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	INADL	HGNC	ENSG00000132849	358	0	0.00	280	108	27.20	-	-	-
ITFG1	0	genome.wustl.edu	37	16	47252799	47252799	+	Missense_Mutation	SNP	C	C	A			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	16	47252799	47252799	C	A	SNP	ITFG1	ENST00000320640	human	ensembl	69_37n	-1	known	missense	c.1433	p.G478V	0.998	NULL	NULL	-	no_errors	ITFG1	HGNC	ENSG00000129636	316	0	0.00	185	90	32.61	-	-	-
LARP1B	0	genome.wustl.edu	37	4	129043387	129043387	+	Missense_Mutation	SNP	G	G	C			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	4	129043387	129043387	G	C	SNP	LARP1B	ENST00000507377	human	ensembl	69_37n	+1	known	missense	c.1473	p.L491F	0.001	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	LARP1B	HGNC	ENSG00000138709	65	0	0.00	46	13	22.03	-	-	-
MLEC	0	genome.wustl.edu	37	12	121132627	121132627	+	Missense_Mutation	SNP	G	G	T			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	12	121132627	121132627	G	T	SNP	MLEC	ENST00000228506	human	ensembl	69_37n	+1	known	missense	c.415	p.V139L	1.000	pfam_Malectin	pfam_Malectin	-	no_errors	MLEC	HGNC	ENSG00000110917	175	1	0.57	99	44	30.77	-	-	-
MLL3	0	genome.wustl.edu	37	7	151945474	151945474	+	Nonsense_Mutation	SNP	G	G	C			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	7	151945474	151945474	G	C	SNP	MLL3	ENST00000355193	human	ensembl	69_37n	-1	known	nonsense	c.2045	p.S682*	0.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	MLL3	HGNC	ENSG00000055609	171	0	0.00	113	51	31.10	-	-	-
NCAM2	0	genome.wustl.edu	37	21	22782691	22782691	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	21	22782691	22782691	A	-	DEL	NCAM2	ENST00000400546	human	ensembl	69_37n	+1	known	frame_shift_del	c.1293	p.I432fs	0.938	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like,prints_Neural_cell_adh	-	no_errors	NCAM2	HGNC	ENSG00000154654	133	0	0.00	119	36	22.93	-	-	-
NEK5	0	genome.wustl.edu	37	13	52661583	52661583	+	Missense_Mutation	SNP	C	C	A			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	13	52661583	52661583	C	A	SNP	NEK5	ENST00000355568	human	ensembl	69_37n	-1	known	missense	c.1283	p.R428L	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK5	HGNC	ENSG00000197168	220	0	0.00	58	53	47.75	-	-	-
NFE2L3	0	genome.wustl.edu	37	7	26224284	26224284	+	Silent	SNP	T	T	C			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	7	26224284	26224284	T	C	SNP	NFE2L3	ENST00000056233	human	ensembl	69_37n	+1	known	silent	c.966	p.C322	0.004	NULL	pfam_bZIP_1,pfam_bZIP_Maf,pfam_bZIP_2,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	NFE2L3	HGNC	ENSG00000050344	113	0	0.00	58	10	14.49	-	-	-
ODZ2	0	genome.wustl.edu	37	5	167545418	167545418	+	Silent	SNP	C	C	T			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	5	167545418	167545418	C	T	SNP	ODZ2	ENST00000518659	human	ensembl	69_37n	+1	known	silent	c.1935	p.C645	1.000	pfam_EGF_extracell,smart_EGF-like,pfscan_EG-like_dom	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl,superfamily_Cytokine_IL1-like,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	ODZ2	HGNC	ENSG00000145934	16	0	0.00	15	4	21.05	-	-	-
OPRM1	0	genome.wustl.edu	37	6	154412132	154412132	+	Missense_Mutation	SNP	G	G	T			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	6	154412132	154412132	G	T	SNP	OPRM1	ENST00000434900	human	ensembl	69_37n	+1	known	missense	c.968	p.W323L	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_Mu_opioid_rcpt,prints_7TM_GPCR_Rhodpsn,prints_Opioid_rcpt,prints_Somatstn_rcpt,prints_Neuropept_W_rcpt,prints_P2_purnocptor,prints_NPY_rcpt	-	no_errors	OPRM1	HGNC	ENSG00000112038	224	0	0.00	141	61	30.20	-	-	-
OR2B3	0	genome.wustl.edu	37	6	29055016	29055016	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	6	29055016	29055016	C	A	SNP	OR2B3	ENST00000377173	human	ensembl	69_37n	-1	known	nonsense	c.10	p.E4*	0.329	NULL	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2B3	HGNC	ENSG00000204703	86	0	0.00	62	22	26.19	-	-	-
PCDHGA11	0	genome.wustl.edu	37	5	140801090	140801090	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	5	140801090	140801090	C	T	SNP	PCDHGA11	ENST00000398587	human	ensembl	69_37n	+1	known	missense	c.296	p.T99M	0.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHGA11	HGNC	ENSG00000253873	11	0	0.00	10	4	28.57	-	-	-
PSMD1	0	genome.wustl.edu	37	2	231927025	231927025	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	2	231927025	231927025	G	-	DEL	PSMD1	ENST00000308696	human	ensembl	69_37n	+1	known	frame_shift_del	c.124	p.V42fs	1.000	superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn2	pfam_APC_proteasome,superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn2	-	no_errors	PSMD1	HGNC	ENSG00000173692	202	0	0.00	148	20	11.76	-	-	-
RAB3GAP2	0	genome.wustl.edu	37	1	220340879	220340879	+	Missense_Mutation	SNP	A	A	G			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	1	220340879	220340879	A	G	SNP	RAB3GAP2	ENST00000358951	human	ensembl	69_37n	-1	known	missense	c.2945	p.V982A	0.019	NULL	superfamily_WD40_repeat_dom	-	no_errors	RAB3GAP2	HGNC	ENSG00000118873	246	0	0.00	167	73	30.42	-	-	-
RAD54L	0	genome.wustl.edu	37	1	46743834	46743834	+	Missense_Mutation	SNP	C	C	A			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	1	46743834	46743834	C	A	SNP	RAD54L	ENST00000371975	human	ensembl	69_37n	+1	known	missense	c.2124	p.H708Q	0.996	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,pfam_Rad54_N,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	RAD54L	HGNC	ENSG00000085999	15	0	0.00	16	13	44.83	-	-	-
SLC5A7	0	genome.wustl.edu	37	2	108604635	108604635	+	Silent	SNP	G	G	C			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	2	108604635	108604635	G	C	SNP	SLC5A7	ENST00000264047	human	ensembl	69_37n	+1	known	silent	c.24	p.L8	1.000	pfscan_Na/solute_symporter	pfam_Na/solute_symporter,pfscan_Na/solute_symporter	-	no_errors	SLC5A7	HGNC	ENSG00000115665	103	0	0.00	87	28	23.93	-	-	-
UHRF1	0	genome.wustl.edu	37	19	4956762	4956762	+	RNA	SNP	A	A	G			TCGA-AN-A0XV-01A-11D-A10G-09	TCGA-AN-A0XV-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f0e5a39-e2c7-4a93-bd63-f1bab1e7c16e	ad602351-e61a-4469-97b0-fedfa3320fdf	19	4956762	4956762	A	G	SNP	UHRF1	ENST00000262952	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	UHRF1	HGNC	ENSG00000034063	46	0	0.00	46	21	31.34	-	-	-
