Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ASPM	0	genome.wustl.edu	37	1	197059075	197059075	+	Silent	SNP	C	C	T			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	1	197059075	197059075	C	T	SNP	ASPM	ENST00000367409	human	ensembl	69_37n	-1	known	silent	c.9969	p.L3323	1.000	superfamily_ARM-type_fold	pfam_IQ_motif_EF-hand-BS,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,superfamily_ARM-type_fold,smart_CH-domain,smart_IQ_motif_EF-hand-BS,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS	-	no_errors	ASPM	HGNC	ENSG00000066279	74	0	0.00	77	56	42.11	-	-	-
BTNL9	0	genome.wustl.edu	37	5	180486582	180486582	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	5	180486582	180486582	G	A	SNP	BTNL9	ENST00000376842	human	ensembl	69_37n	+1	known	missense	c.1331	p.R444H	0.001	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Ig_V-set,superfamily_ConA-like_lec_gl,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like	-	no_errors	BTNL9	HGNC	ENSG00000165810	16	0	0.00	17	7	29.17	-	-	-
CASC1	0	genome.wustl.edu	37	12	25307302	25307302	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	12	25307302	25307302	G	T	SNP	CASC1	ENST00000395987	human	ensembl	69_37n	-1	known	missense	c.389	p.T130K	0.791	NULL	pfam_Casc1_domain,prints_Casc1	-	no_errors	CASC1	HGNC	ENSG00000118307	316	0	0.00	245	132	35.01	-	-	-
CBFB	0	genome.wustl.edu	37	16	67100598	67100598	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	16	67100598	67100598	C	T	SNP	CBFB	ENST00000290858	human	ensembl	69_37n	+1	known	missense	c.296	p.A99V	1.000	pfam_CBF_beta,superfamily_CBF_beta	pfam_CBF_beta,superfamily_CBF_beta	-	no_errors	CBFB	HGNC	ENSG00000067955	421	0	0.00	112	197	63.55	-	-	-
CCNB3	0	genome.wustl.edu	37	X	50094618	50094618	+	Missense_Mutation	SNP	A	A	T			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	X	50094618	50094618	A	T	SNP	CCNB3	ENST00000276014	human	ensembl	69_37n	+1	known	missense	c.4104	p.E1368D	1.000	pfam_Cyclin_C,superfamily_Cyclin-like	pfam_Cyclin_N,pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNB3	HGNC	ENSG00000147082	290	0	0.00	227	167	42.39	-	-	-
CEP170	0	genome.wustl.edu	37	1	243289876	243289876	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	1	243289876	243289876	G	A	SNP	CEP170	ENST00000366542	human	ensembl	69_37n	-1	known	missense	c.4630	p.L1544F	0.998	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,superfamily_Fibronectin_type3,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	CEP170	HGNC	ENSG00000143702	70	0	0.00	90	22	19.64	-	-	-
ENSG00000210082	0	genome.wustl.edu	37	MT	2499	2499	+	RNA	SNP	T	T	C			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	MT	2499	2499	T	C	SNP	ENSG00000210082	ENST00000387347	human	ensembl	69_37n	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	J01415.4	Clone_based_ensembl_gene	ENSG00000210082	154	0	0.00	108	28	20.59	-	-	-
EVI5	0	genome.wustl.edu	37	1	93131496	93131496	+	Frame_Shift_Del	DEL	T	T	-			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	1	93131496	93131496	T	-	DEL	EVI5	ENST00000543509	human	ensembl	69_37n	-1	known	frame_shift_del	c.1344	p.E449fs	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	EVI5	HGNC	ENSG00000067208	398	0	0.00	276	164	36.77	-	-	-
FBXW12	0	genome.wustl.edu	37	3	48416853	48416853	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	3	48416853	48416853	C	T	SNP	FBXW12	ENST00000296438	human	ensembl	69_37n	+1	known	missense	c.296	p.T99M	0.000	superfamily_F-box_dom_cyclin-like	pfam_F-box_dom_cyclin-like,superfamily_Quino_amine_DH_bsu,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like	-	no_errors	FBXW12	HGNC	ENSG00000164049	191	0	0.00	227	55	19.50	-	-	-
GABRG2	0	genome.wustl.edu	37	5	161522529	161522529	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	5	161522529	161522529	G	A	SNP	GABRG2	ENST00000356592	human	ensembl	69_37n	+1	known	missense	c.288	p.M96I	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_GABBAg_rcpt,prints_GABAAa_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABBAg_rcpt,prints_GABAA_rcpt,prints_GABBAg2_rcpt,prints_GABAAa_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRG2	HGNC	ENSG00000113327	325	0	0.00	296	135	31.32	-	-	-
GBP1	0	genome.wustl.edu	37	1	89521803	89521805	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	1	89521803	89521805	CTT	-	DEL	GBP1	ENST00000370473	human	ensembl	69_37n	-1	known	in_frame_del	c.1264_1262	p.E421in_frame_del	0.012:0.000:0.000	pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	pfam_Guanylate-bd_C,pfam_Guanylate-bd_N,superfamily_Guanylate-bd_C	-	no_errors	GBP1	HGNC	ENSG00000117228	266	0	0.00	294	92	23.77	-	-	-
GSPT2	0	genome.wustl.edu	37	X	51488514	51488514	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	X	51488514	51488514	A	G	SNP	GSPT2	ENST00000340438	human	ensembl	69_37n	+1	known	missense	c.1792	p.K598E	1.000	pfam_Transl_elong_EFTu/EF1A_C,superfamily_Transl_elong_EF1A/Init_IF2_C	pfam_ProtSyn_GTP-bd,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,pfam_Ataxin-2_C,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_elong_init/rib_B-barrel,prints_ProtSyn_GTP-bd	-	no_errors	GSPT2	HGNC	ENSG00000189369	127	1	0.78	87	43	33.08	-	-	-
HFM1	0	genome.wustl.edu	37	1	91727807	91727807	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	1	91727807	91727807	A	G	SNP	HFM1	ENST00000370425	human	ensembl	69_37n	-1	known	missense	c.4229	p.V1410A	0.832	NULL	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	HFM1	HGNC	ENSG00000162669	107	0	0.00	66	35	34.65	-	-	-
IL33	0	genome.wustl.edu	37	9	6252949	6252949	+	Missense_Mutation	SNP	T	T	G			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	9	6252949	6252949	T	G	SNP	IL33	ENST00000381434	human	ensembl	69_37n	+1	known	missense	c.427	p.Y143D	0.078	NULL	NULL	-	no_errors	IL33	HGNC	ENSG00000137033	159	0	0.00	93	77	45.29	-	-	-
JUN	0	genome.wustl.edu	37	1	59248498	59248498	+	Frame_Shift_Del	DEL	T	T	-			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	1	59248498	59248498	T	-	DEL	JUN	ENST00000371222	human	ensembl	69_37n	-1	known	frame_shift_del	c.245	p.Q82fs	1.000	pfam_JNK	pfam_JNK,pfam_bZIP_1,pfam_bZIP_2,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Jun	-	no_errors	JUN	HGNC	ENSG00000177606	51	0	0.00	38	19	33.33	-	-	-
LYPD4	0	genome.wustl.edu	37	19	42342215	42342215	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	19	42342215	42342215	C	T	SNP	LYPD4	ENST00000330743	human	ensembl	69_37n	-1	known	missense	c.332	p.R111Q	0.824	NULL	pfam_LY6_UPAR	-	no_errors	LYPD4	HGNC	ENSG00000183103	116	0	0.00	62	63	50.40	-	-	-
MLPH	0	genome.wustl.edu	37	2	238461047	238461047	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	2	238461047	238461047	C	T	SNP	MLPH	ENST00000432475	human	ensembl	69_37n	+1	known	missense	c.538	p.R180C	0.857	NULL	pfam_Myelin-assoc_OBP	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	MLPH	HGNC	ENSG00000115648	71	0	0.00	53	32	37.65	-	-	-
MT-CYB	0	genome.wustl.edu	37	MT	14805	14805	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	MT	14805	14805	A	G	SNP	MT-CYB	ENST00000361789	human	ensembl	69_37n	+1	known	missense	c.59	p.D20G	NULL	superfamily_Di-haem_cyt_TM,pfscan_Cyt_b/b6_N	pfam_Cyt_b/b6_C,pfam_Di-haem_cyt_TM,superfamily_Di-haem_cyt_TM,superfamily_Cyt_b/b6_C,pfscan_Cyt_b/b6_N,pfscan_Cyt_b/b6_C	-	no_stop_codon:bad_bp_length_for_coding_region	MT-CYB	HGNC	ENSG00000198727	316	1	0.31	238	35	12.82	-	-	-
MYH9	0	genome.wustl.edu	37	22	36697633	36697634	+	In_Frame_Ins	INS	-	-	GAG			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	22	36697633	36697634	-	GAG	INS	MYH9	ENST00000216181	human	ensembl	69_37n	-1	known	in_frame_ins	c.2578_2577	p.859in_frame_insL	1.000:1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_Regulat_G_prot_signal_superfam,superfamily_Prefoldin,superfamily_Myosin_S1_N,superfamily_STAT_TF_coiled-coil,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH9	HGNC	ENSG00000100345	169	0	0.00	50	53	51.46	-	-	-
MYH9	0	genome.wustl.edu	37	22	36697634	36697634	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	22	36697634	36697634	C	A	SNP	MYH9	ENST00000216181	human	ensembl	69_37n	-1	known	missense	c.2577	p.E859D	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_Regulat_G_prot_signal_superfam,superfamily_Prefoldin,superfamily_Myosin_S1_N,superfamily_STAT_TF_coiled-coil,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH9	HGNC	ENSG00000100345	174	0	0.00	46	54	53.47	-	-	-
MYH9	0	genome.wustl.edu	37	22	36697635	36697635	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	22	36697635	36697635	T	A	SNP	MYH9	ENST00000216181	human	ensembl	69_37n	-1	known	missense	c.2576	p.E859V	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_Regulat_G_prot_signal_superfam,superfamily_Prefoldin,superfamily_Myosin_S1_N,superfamily_STAT_TF_coiled-coil,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH9	HGNC	ENSG00000100345	173	0	0.00	46	55	54.46	-	-	-
NEIL1	0	genome.wustl.edu	37	15	75647320	75647320	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	15	75647320	75647320	G	A	SNP	NEIL1	ENST00000355059	human	ensembl	69_37n	+1	known	missense	c.1118	p.R373Q	0.000	NULL	pfam_Endonuclease-VIII_DNA-bd,pfam_DNA_glycosylase/AP_lyase_cat,pfam_DNA_glyclase/AP_lyase_DNA-bd,superfamily_DNA_glycosylase/AP_lyase_cat,superfamily_Ribosomal_S13-like_H2TH,smart_DNA_glycosylase/AP_lyase_cat,pfscan_DNA_glycosylase/AP_lyase_cat	-	no_errors	NEIL1	HGNC	ENSG00000140398	64	0	0.00	35	35	50.00	-	-	-
NEK1	0	genome.wustl.edu	37	4	170321765	170321765	+	Silent	SNP	G	G	A			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	4	170321765	170321765	G	A	SNP	NEK1	ENST00000507142	human	ensembl	69_37n	-1	known	silent	c.3621	p.C1207	0.991	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK1	HGNC	ENSG00000137601	167	0	0.00	139	97	41.10	-	-	-
PANK4	0	genome.wustl.edu	37	1	2453186	2453186	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	1	2453186	2453186	T	C	SNP	PANK4	ENST00000378466	human	ensembl	69_37n	-1	known	missense	c.178	p.K60E	0.987	pfam_Type_II_PanK,pirsf_PanK_long,tigrfam_Type_II_PanK	pfam_Type_II_PanK,pfam_DUF89,superfamily_DUF89,pirsf_PanK_long,tigrfam_Type_II_PanK	-	no_errors	PANK4	HGNC	ENSG00000157881	118	0	0.00	86	56	39.44	-	-	-
PCDHGC3	0	genome.wustl.edu	37	5	140857180	140857180	+	Silent	SNP	A	A	G			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	5	140857180	140857180	A	G	SNP	PCDHGC3	ENST00000308177	human	ensembl	69_37n	+1	known	silent	c.1497	p.Q499	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGC3	HGNC	ENSG00000240184	92	0	0.00	62	39	38.61	-	-	-
PCOLCE	0	genome.wustl.edu	37	7	100203382	100203382	+	Silent	SNP	C	C	G			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	7	100203382	100203382	C	G	SNP	PCOLCE	ENST00000223061	human	ensembl	69_37n	+1	known	silent	c.672	p.A224	0.033	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_Netrin_module_non-TIMP,superfamily_CUB,superfamily_TIMP-like_OB-fold,smart_CUB,smart_Netrin_module_non-TIMP,pfscan_CUB,pfscan_Netrin_domain	-	no_errors	PCOLCE	HGNC	ENSG00000106333	29	0	0.00	18	10	35.71	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	131	0	0.00	75	61	44.85	-	-	-
PNPLA6	0	genome.wustl.edu	37	19	7605077	7605077	+	Silent	SNP	C	C	T			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	19	7605077	7605077	C	T	SNP	PNPLA6	ENST00000414982	human	ensembl	69_37n	+1	known	silent	c.624	p.C208	1.000	superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA6	HGNC	ENSG00000032444	40	0	0.00	27	10	27.03	-	-	-
PTCH1	0	genome.wustl.edu	37	9	98215818	98215818	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	9	98215818	98215818	C	T	SNP	PTCH1	ENST00000331920	human	ensembl	69_37n	-1	known	missense	c.3391	p.V1131M	0.997	pfam_Patched,tigrfam_TM_rcpt_patched	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	-	no_errors	PTCH1	HGNC	ENSG00000185920	31	0	0.00	24	14	36.84	-	-	-
RP1	0	genome.wustl.edu	37	8	55533670	55533670	+	Silent	SNP	C	C	T			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	8	55533670	55533670	C	T	SNP	RP1	ENST00000220676	human	ensembl	69_37n	+1	known	silent	c.144	p.F48	0.008	superfamily_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	pfam_Doublecortin_dom,superfamily_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1	HGNC	ENSG00000104237	140	0	0.00	114	66	36.67	-	-	-
SCN4A	0	genome.wustl.edu	37	17	62018350	62018350	+	Silent	SNP	G	G	A			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	17	62018350	62018350	G	A	SNP	SCN4A	ENST00000435607	human	ensembl	69_37n	-1	known	silent	c.5292	p.D1764	0.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN4A	HGNC	ENSG00000007314	85	0	0.00	56	44	44.00	-	-	-
SLC2A9	0	genome.wustl.edu	37	4	9836553	9836553	+	Silent	SNP	G	G	A			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	4	9836553	9836553	G	A	SNP	SLC2A9	ENST00000264784	human	ensembl	69_37n	-1	known	silent	c.1371	p.V457	1.000	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A9	HGNC	ENSG00000109667	38	0	0.00	28	24	46.15	-	-	-
TBL1XR1	0	genome.wustl.edu	37	3	176765098	176765098	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	3	176765098	176765098	C	A	SNP	TBL1XR1	ENST00000430069	human	ensembl	69_37n	-1	known	missense	c.854	p.G285V	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_LisH_dimerisation_subgr,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_LisH_dimerisation,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TBL1XR1	HGNC	ENSG00000177565	77	0	0.00	52	44	45.83	-	-	-
THBS1	0	genome.wustl.edu	37	15	39883768	39883768	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	15	39883768	39883768	A	G	SNP	THBS1	ENST00000260356	human	ensembl	69_37n	+1	known	missense	c.2476	p.M826V	0.937	pfam_Thrombospondin_3-like_rpt	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS1	HGNC	ENSG00000137801	195	0	0.00	139	98	41.18	-	-	-
TMEM145	0	genome.wustl.edu	37	19	42820840	42820840	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	19	42820840	42820840	C	A	SNP	TMEM145	ENST00000301204	human	ensembl	69_37n	+1	known	missense	c.754	p.L252I	1.000	pfam_Rhodopsin-like_GPCR_TM_domain	pfam_Rhodopsin-like_GPCR_TM_domain	-	no_errors	TMEM145	HGNC	ENSG00000167619	93	0	0.00	63	41	39.42	-	-	-
USP54	0	genome.wustl.edu	37	10	75276172	75276172	+	Missense_Mutation	SNP	C	C	G			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	10	75276172	75276172	C	G	SNP	USP54	ENST00000339859	human	ensembl	69_37n	-1	known	missense	c.4012	p.G1338R	0.998	NULL	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP54	HGNC	ENSG00000166348	147	0	0.00	88	59	40.14	-	-	-
WWTR1	0	genome.wustl.edu	37	3	149243909	149243909	+	Silent	SNP	C	C	A			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	3	149243909	149243909	C	A	SNP	WWTR1	ENST00000360632	human	ensembl	69_37n	-1	known	silent	c.909	p.G303	0.994	NULL	pfam_WW_Rsp5_WWP,superfamily_WW_Rsp5_WWP,smart_WW_Rsp5_WWP,pfscan_WW_Rsp5_WWP	-	no_errors	WWTR1	HGNC	ENSG00000018408	103	0	0.00	88	30	25.42	-	-	-
XKR6	0	genome.wustl.edu	37	8	10755750	10755750	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	8	10755750	10755750	G	A	SNP	XKR6	ENST00000382461	human	ensembl	69_37n	-1	putative	missense	c.968	p.P323L	1.000	NULL	pfam_Transport_prot_XK	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	XKR6	HGNC	ENSG00000171044	23	0	0.00	15	6	28.57	-	-	-
ZNF592	0	genome.wustl.edu	37	15	85341673	85341673	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbbcb493-2937-4a7b-8454-0abbbb379927	5465e36a-97f7-4408-81c1-9f8e836c1279	15	85341673	85341673	G	T	SNP	ZNF592	ENST00000299927	human	ensembl	69_37n	+1	known	missense	c.2704	p.V902L	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF592	HGNC	ENSG00000166716	66	0	0.00	41	30	42.25	-	-	-
