Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCG1	0	genome.wustl.edu	37	21	43693544	43693544	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	21	43693544	43693544	T	A	SNP	ABCG1	ENST00000398437	human	ensembl	69_37n	+1	known	missense	c.974	p.M325K	1.000	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Pigment_permease	pfam_ABC_2_trans,pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Pigment_permease	-	no_errors	ABCG1	HGNC	ENSG00000160179	25	0	0.00	11	7	38.89	-	-	-
ABO	0	genome.wustl.edu	37	9	136131313	136131314	+	RNA	INS	-	-	C			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	9	136131313	136131314	-	C	INS	ABO	ENST00000453660	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.116:0.001	-	-	-	no_errors	ABO	HGNC	ENSG00000175164	29	0	0.00	27	3	10.00	-	-	-
CACNA1D	0	genome.wustl.edu	37	3	53844194	53844194	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	3	53844194	53844194	C	T	SNP	CACNA1D	ENST00000288139	human	ensembl	69_37n	+1	known	missense	c.6121	p.R2041C	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su,prints_LVDCC_a1dsu	-	no_errors	CACNA1D	HGNC	ENSG00000157388	48	0	0.00	23	11	32.35	-	-	-
CEP164	0	genome.wustl.edu	37	11	117252486	117252487	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	11	117252486	117252487	-	C	INS	CEP164	ENST00000278935	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1479_1480	p.P494fs	0.299:0.293	NULL	superfamily_WW_Rsp5_WWP,smart_WW_Rsp5_WWP,pfscan_WW_Rsp5_WWP	-	no_errors	CEP164	HGNC	ENSG00000110274	13	0	0.00	5	2	28.57	-	-	-
CHGB	0	genome.wustl.edu	37	20	5903619	5903619	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	20	5903619	5903619	C	T	SNP	CHGB	ENST00000378961	human	ensembl	69_37n	+1	known	nonsense	c.829	p.R277*	0.979	pfam_Granin	pfam_Granin,prints_Chromogranin_AB	-	no_errors	CHGB	HGNC	ENSG00000089199	88	0	0.00	38	31	44.29	-	-	-
DNAH8	0	genome.wustl.edu	37	6	38851106	38851106	+	Silent	SNP	G	G	A			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	6	38851106	38851106	G	A	SNP	DNAH8	ENST00000359357	human	ensembl	69_37n	+1	known	silent	c.7359	p.L2453	1.000	pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721	300	0	0.00	262	156	37.32	-	-	-
EWSR1	0	genome.wustl.edu	37	22	29668221	29668221	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	22	29668221	29668221	C	-	DEL	EWSR1	ENST00000414183	human	ensembl	69_37n	+1	known	frame_shift_del	c.30	p.Q11fs	1.000	NULL	pfam_Znf_RanBP2,pfam_RRM_dom,smart_RRM_dom,smart_Znf_RanBP2,pfscan_Znf_RanBP2,pfscan_RRM_dom	-	no_errors	EWSR1	HGNC	ENSG00000182944	112	0	0.00	65	36	35.64	-	-	-
GAP43	0	genome.wustl.edu	37	3	115395170	115395170	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	3	115395170	115395170	G	T	SNP	GAP43	ENST00000305124	human	ensembl	69_37n	+1	known	missense	c.341	p.G114V	0.106	pfam_Neuromodulin_C	pfam_Neuromodulin_C,pfam_Neuromodulin_gap-junction_N,pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,prints_Neuromodulin,pfscan_IQ_motif_EF-hand-BS	-	no_errors	GAP43	HGNC	ENSG00000172020	111	1	0.89	57	30	34.48	-	-	-
GBP6	0	genome.wustl.edu	37	1	89843685	89843685	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	1	89843685	89843685	G	T	SNP	GBP6	ENST00000370456	human	ensembl	69_37n	+1	known	missense	c.342	p.W114C	1.000	pfam_Guanylate-bd_N	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	-	no_errors	GBP6	HGNC	ENSG00000183347	194	0	0.00	160	72	30.90	-	-	-
GULP1	0	genome.wustl.edu	37	2	189405977	189405977	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	2	189405977	189405977	T	C	SNP	GULP1	ENST00000359135	human	ensembl	69_37n	+1	known	missense	c.331	p.F111L	1.000	pfam_PTyr_interaction_dom,pfam_PTB,smart_PTyr_interaction_dom,pfscan_PTyr_interaction_dom	pfam_PTyr_interaction_dom,pfam_PTB,smart_PTyr_interaction_dom,pfscan_PTyr_interaction_dom	-	no_errors	GULP1	HGNC	ENSG00000144366	127	0	0.00	108	93	46.27	-	-	-
INO80B	0	genome.wustl.edu	37	2	74684835	74684835	+	Silent	SNP	G	G	C			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	2	74684835	74684835	G	C	SNP	INO80B	ENST00000452361	human	ensembl	69_37n	+1	known	silent	c.915	p.P305	0.002	pfam_Znf_HIT	pfam_PAPA1,pfam_Znf_HIT	-	no_errors	INO80B	HGNC	ENSG00000115274	23	0	0.00	16	11	40.74	-	-	-
LMBR1L	0	genome.wustl.edu	37	12	49496159	49496159	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	12	49496159	49496159	T	A	SNP	LMBR1L	ENST00000267102	human	ensembl	69_37n	-1	known	missense	c.770	p.N257I	1.000	pfam_LMBR1-like_membr_prot	pfam_LMBR1-like_membr_prot,prints_Lipcalin_1_rcpt	-	no_errors	LMBR1L	HGNC	ENSG00000139636	96	0	0.00	75	44	36.97	-	-	-
RUNX1T1	0	genome.wustl.edu	37	8	92972572	92972572	+	Silent	SNP	C	C	T			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	8	92972572	92972572	C	T	SNP	RUNX1T1	ENST00000436581	human	ensembl	69_37n	-1	known	silent	c.1746	p.T582	0.850	NULL	pfam_NHR2,pfam_TAFH_NHR1,pfam_Znf_MYND,smart_TAFH_NHR1,pfscan_TAFH_NHR1,pfscan_Znf_MYND,prints_ETO,prints_MTG8	-	no_errors	RUNX1T1	HGNC	ENSG00000079102	43	0	0.00	118	51	29.48	-	-	-
SACS	0	genome.wustl.edu	37	13	23930148	23930148	+	Splice_Site	SNP	T	T	G			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	13	23930148	23930148	T	G	SNP	SACS	ENST00000382292	human	ensembl	69_37n	-1	known	splice_site	c.605-2	e7-2	1.000	-	-	-	no_errors	SACS	HGNC	ENSG00000151835	68	0	0.00	45	24	34.78	-	-	-
SCUBE1	0	genome.wustl.edu	37	22	43603586	43603586	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	22	43603586	43603586	C	T	SNP	SCUBE1	ENST00000360835	human	ensembl	69_37n	-1	known	missense	c.2768	p.R923H	0.980	NULL	pfam_EGF-like_Ca-bd,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EGF-like_dom,pfam_CUB,superfamily_CUB,superfamily_Growth_fac_rcpt,smart_EGF-like_Ca-bd,smart_EGF-like,smart_CUB,pfscan_CUB,pfscan_EG-like_dom	-	no_errors	SCUBE1	HGNC	ENSG00000159307	12	0	0.00	10	8	44.44	-	-	-
SMCHD1	0	genome.wustl.edu	37	18	2700752	2700752	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	18	2700752	2700752	C	T	SNP	SMCHD1	ENST00000320876	human	ensembl	69_37n	+1	known	missense	c.1483	p.P495S	1.000	NULL	pfam_SMC_hinge,superfamily_SMC_hinge,superfamily_ATPase-like_ATP-bd,smart_SMC_hinge	-	no_errors	SMCHD1	HGNC	ENSG00000101596	101	0	0.00	27	48	64.00	-	-	-
UGT2A1	0	genome.wustl.edu	37	4	70504971	70504971	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	4	70504971	70504971	T	A	SNP	UGT2A1	ENST00000457664	human	ensembl	69_37n	-1	known	missense	c.388	p.I130F	0.001	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2A1	HGNC	ENSG00000173610	256	0	0.00	195	112	36.48	-	-	-
ZNF45	0	genome.wustl.edu	37	19	44419341	44419341	+	Silent	SNP	G	G	A			TCGA-BH-A0H6-01A-21W-A071-09	TCGA-BH-A0H6-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bbed00d2-9791-464d-a1ba-28fd56a0504e	6ddf4ce5-5956-4394-af6e-f840573ac67e	19	44419341	44419341	G	A	SNP	ZNF45	ENST00000269973	human	ensembl	69_37n	-1	known	silent	c.247	p.L83	0.021	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF45	HGNC	ENSG00000124459	105	0	0.00	58	42	42.00	-	-	-
