Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AVPR2	0	genome.wustl.edu	37	X	153172076	153172076	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	X	153172076	153172076	G	A	SNP	AVPR2	ENST00000337474	human	ensembl	69_37n	+1	known	missense	c.1010	p.R337Q	0.183	prints_Vprsn_rcpt_V2	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Vprsn_rcpt_V2,prints_Vasoprsn_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	AVPR2	HGNC	ENSG00000126895	45	0	0.00	19	4	17.39	-	-	-
BTBD3	0	genome.wustl.edu	37	20	11904104	11904104	+	Silent	SNP	A	A	G			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	20	11904104	11904104	A	G	SNP	BTBD3	ENST00000378226	human	ensembl	69_37n	+1	known	silent	c.1359	p.V453	1.000	pfam_PHR	pfam_PHR,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD3	HGNC	ENSG00000132640	81	0	0.00	42	33	44.00	-	-	-
CHIA	0	genome.wustl.edu	37	1	111857167	111857167	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	1	111857167	111857167	G	A	SNP	CHIA	ENST00000343320	human	ensembl	69_37n	+1	known	missense	c.263	p.S88N	0.019	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	pfam_Glyco_hydro18cat,pfam_Chitin-bd_dom,superfamily_Glycoside_hydrolase_SF,superfamily_Chitin-bd_dom,smart_Chitinase_II,smart_Chitin-bd_dom,pfscan_Chitin-bd_dom	-	no_errors	CHIA	HGNC	ENSG00000134216	86	0	0.00	31	24	43.64	-	-	-
CPSF3	0	genome.wustl.edu	37	2	9597078	9597078	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	2	9597078	9597078	A	C	SNP	CPSF3	ENST00000238112	human	ensembl	69_37n	+1	known	missense	c.1620	p.L540F	1.000	pfam_CPSF73-100_C	pfam_CPSF73-100_C,pfam_Beta_Casp,pfam_Beta-lactamas-like,pfam_RMMBL,smart_Beta-lactamas-like	-	no_errors	CPSF3	HGNC	ENSG00000119203	25	0	0.00	37	7	15.91	-	-	-
CYTIP	0	genome.wustl.edu	37	2	158300389	158300389	+	Silent	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	2	158300389	158300389	C	T	SNP	CYTIP	ENST00000264192	human	ensembl	69_37n	-1	known	silent	c.144	p.T48	0.011	superfamily_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	CYTIP	HGNC	ENSG00000115165	120	1	0.83	64	15	18.99	-	-	-
EML5	0	genome.wustl.edu	37	14	89205341	89205341	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	14	89205341	89205341	C	T	SNP	EML5	ENST00000554922	human	ensembl	69_37n	-1	known	missense	c.729	p.M243I	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_HELP,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML5	HGNC	ENSG00000165521	22	0	0.00	43	13	23.21	-	-	-
EXPH5	0	genome.wustl.edu	37	11	108380596	108380596	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	11	108380596	108380596	T	C	SNP	EXPH5	ENST00000265843	human	ensembl	69_37n	-1	known	missense	c.5638	p.I1880V	0.614	NULL	superfamily_Znf_FYVE_PHD,pfscan_Rab-bd_domain	-	no_errors	EXPH5	HGNC	ENSG00000110723	30	0	0.00	13	12	48.00	-	-	-
FAM208A	0	genome.wustl.edu	37	3	56667431	56667431	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	3	56667431	56667431	T	G	SNP	FAM208A	ENST00000355628	human	ensembl	69_37n	-1	known	missense	c.3205	p.N1069H	0.210	NULL	pfam_DUF3715	-	no_errors	FAM208A	HGNC	ENSG00000163946	32	0	0.00	42	19	31.15	-	-	-
FAM57A	0	genome.wustl.edu	37	17	644619	644619	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	17	644619	644619	C	T	SNP	FAM57A	ENST00000308278	human	ensembl	69_37n	+1	known	missense	c.583	p.L195F	0.678	pfam_TLC-dom,smart_TLC-dom,pfscan_TLC-dom	pfam_TLC-dom,smart_TLC-dom,pfscan_TLC-dom	-	no_errors	FAM57A	HGNC	ENSG00000167695	121	0	0.00	47	14	22.95	-	-	-
FBXL18	0	genome.wustl.edu	37	7	5541277	5541277	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	7	5541277	5541277	C	T	SNP	FBXL18	ENST00000453700	human	ensembl	69_37n	-1	known	missense	c.623	p.R208H	0.938	NULL	pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like	-	no_errors	FBXL18	HGNC	ENSG00000155034	12	0	0.00	15	12	44.44	-	-	-
FBXL7	0	genome.wustl.edu	37	5	15936967	15936967	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	5	15936967	15936967	C	T	SNP	FBXL7	ENST00000504595	human	ensembl	69_37n	+1	known	missense	c.1148	p.A383V	1.000	smart_Leu-rich_rpt_Cys-con_subtyp	pfam_Leu-rich_rpt,pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_F-box_dom_cyclin-like	-	no_errors	FBXL7	HGNC	ENSG00000183580	27	0	0.00	26	8	23.53	-	-	-
GGT3P	0	genome.wustl.edu	37	22	18769678	18769678	+	RNA	SNP	G	G	A			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	22	18769678	18769678	G	A	SNP	GGT3P	ENST00000412448	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GGT3P	HGNC	ENSG00000197421	41	0	0.00	35	5	12.50	-	-	-
GRIN2B	0	genome.wustl.edu	37	12	13716419	13716419	+	Silent	SNP	C	C	G			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	12	13716419	13716419	C	G	SNP	GRIN2B	ENST00000279593	human	ensembl	69_37n	-1	known	silent	c.3753	p.L1251	1.000	pfam_NMDAR2_C	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2B	HGNC	ENSG00000150086	113	0	0.00	63	20	24.10	-	-	-
HAUS7	0	genome.wustl.edu	37	X	152728092	152728092	+	Silent	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	X	152728092	152728092	C	T	SNP	HAUS7	ENST00000370212	human	ensembl	69_37n	-1	known	silent	c.360	p.A120	0.004	NULL	NULL	-	no_errors	HAUS7	HGNC	ENSG00000213397	68	0	0.00	47	15	24.19	-	-	-
ICA1L	0	genome.wustl.edu	37	2	203653623	203653623	+	Silent	SNP	G	G	A			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	2	203653623	203653623	G	A	SNP	ICA1L	ENST00000358299	human	ensembl	69_37n	-1	known	silent	c.1173	p.L391	0.870	pfam_Islet_autoAg_Ica1_C	pfam_Islet_autoAg_Ica1_C,pfam_Arfaptin_homology_dom,pfscan_Arfaptin_homology_dom	-	no_errors	ICA1L	HGNC	ENSG00000163596	32	0	0.00	22	23	51.11	-	-	-
KIF5A	0	genome.wustl.edu	37	12	57966441	57966441	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	12	57966441	57966441	G	T	SNP	KIF5A	ENST00000455537	human	ensembl	69_37n	+1	known	missense	c.1648	p.V550L	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_Prefoldin,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF5A	HGNC	ENSG00000155980	194	0	0.00	53	13	19.70	-	-	-
LINGO2	0	genome.wustl.edu	37	9	27949804	27949804	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	9	27949804	27949804	T	G	SNP	LINGO2	ENST00000308675	human	ensembl	69_37n	-1	known	missense	c.866	p.E289A	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Ig_V-set,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LINGO2	HGNC	ENSG00000174482	99	1	1.00	60	20	25.00	-	-	-
MBD5	0	genome.wustl.edu	37	2	149227717	149227717	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	2	149227717	149227717	C	T	SNP	MBD5	ENST00000416015	human	ensembl	69_37n	+1	novel	missense	c.1424	p.T475I	1.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	MBD5	HGNC	ENSG00000204406	35	0	0.00	44	30	40.54	-	-	-
MIA3	0	genome.wustl.edu	37	1	222828136	222828136	+	Splice_Site	SNP	G	G	C			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	1	222828136	222828136	G	C	SNP	MIA3	ENST00000344441	human	ensembl	69_37n	+1	known	splice_site	c.4607+1	e18+1	1.000	-	-	-	no_errors	MIA3	HGNC	ENSG00000154305	54	0	0.00	28	9	23.68	-	-	-
MLL5	0	genome.wustl.edu	37	7	104752417	104752417	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	7	104752417	104752417	C	T	SNP	MLL5	ENST00000257745	human	ensembl	69_37n	+1	known	missense	c.4214	p.S1405L	0.002	NULL	pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_PHD-finger	-	no_errors	MLL5	HGNC	ENSG00000005483	51	0	0.00	63	14	18.18	-	-	-
MYH8	0	genome.wustl.edu	37	17	10312698	10312698	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	17	10312698	10312698	T	C	SNP	MYH8	ENST00000403437	human	ensembl	69_37n	-1	known	missense	c.1795	p.K599E	1.000	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH8	HGNC	ENSG00000133020	129	0	0.00	75	16	17.58	-	-	-
MYO16	0	genome.wustl.edu	37	13	109779790	109779790	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	13	109779790	109779790	C	T	SNP	MYO16	ENST00000356711	human	ensembl	69_37n	+1	known	missense	c.3877	p.R1293W	0.997	NULL	pfam_Myosin_head_motor_dom,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Myosin_head_motor_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO16	HGNC	ENSG00000041515	16	0	0.00	14	7	33.33	-	-	-
MYO5A	0	genome.wustl.edu	37	15	52667640	52667640	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	15	52667640	52667640	C	T	SNP	MYO5A	ENST00000358212	human	ensembl	69_37n	-1	known	missense	c.2438	p.R813H	1.000	smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_Skp1_comp_dimer,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5A	HGNC	ENSG00000197535	51	0	0.00	45	15	25.00	-	-	-
NOA1	0	genome.wustl.edu	37	4	57842776	57842776	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	4	57842776	57842776	C	T	SNP	NOA1	ENST00000264230	human	ensembl	69_37n	-1	known	missense	c.976	p.E326K	1.000	NULL	NULL	-	no_errors	NOA1	HGNC	ENSG00000084092	20	0	0.00	20	7	25.93	-	-	-
OBP2B	0	genome.wustl.edu	37	9	136083528	136083528	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	9	136083528	136083528	T	A	SNP	OBP2B	ENST00000372034	human	ensembl	69_37n	-1	known	missense	c.269	p.Y90F	0.224	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_von_Ebner_gland	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_von_Ebner_gland,prints_PstgldnD_synth	-	no_errors	OBP2B	HGNC	ENSG00000171102	22	0	0.00	8	6	42.86	-	-	-
ORM2	0	genome.wustl.edu	37	9	117092260	117092260	+	Silent	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	9	117092260	117092260	C	T	SNP	ORM2	ENST00000431067	human	ensembl	69_37n	+1	known	silent	c.76	p.L26	0.000	pfam_ApoM,pirsf_A1A_glycop	pfam_Lipocln_cytosolic_FA-bd_dom,pfam_ApoM,superfamily_Calycin-like,pirsf_A1A_glycop,prints_A1A_glycop	-	no_errors	ORM2	HGNC	ENSG00000228278	44	0	0.00	9	3	25.00	-	-	-
PARP8	0	genome.wustl.edu	37	5	50046013	50046013	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	5	50046013	50046013	G	C	SNP	PARP8	ENST00000281631	human	ensembl	69_37n	+1	known	missense	c.175	p.D59H	1.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP8	HGNC	ENSG00000151883	116	0	0.00	141	33	18.97	-	-	-
PLXNB3	0	genome.wustl.edu	37	X	153032507	153032507	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	X	153032507	153032507	C	G	SNP	PLXNB3	ENST00000538966	human	ensembl	69_37n	+1	known	missense	c.294	p.F98L	1.000	pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,smart_Semaphorin/CD100_Ag,pfscan_Semaphorin/CD100_Ag	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT_TIG_rcpt,pfam_Plexin_repeat,pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_IPT_TIG_rcpt,pfscan_Semaphorin/CD100_Ag	-	no_errors	PLXNB3	HGNC	ENSG00000198753	14	0	0.00	25	8	24.24	-	-	-
PRDX4	0	genome.wustl.edu	37	X	23697375	23697375	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	X	23697375	23697375	A	G	SNP	PRDX4	ENST00000439422	human	ensembl	69_37n	+1	known	missense	c.202	p.I68V	0.249	pfam_AhpC/TSA,pfam_Redoxin,superfamily_Thioredoxin-like_fold	pfam_AhpC/TSA,pfam_Peroxiredoxin_C,pfam_Redoxin,superfamily_Thioredoxin-like_fold	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	PRDX4	HGNC	ENSG00000123131	96	0	0.00	52	14	21.21	-	-	-
REG3G	0	genome.wustl.edu	37	2	79253873	79253873	+	Silent	SNP	G	G	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	2	79253873	79253873	G	T	SNP	REG3G	ENST00000272324	human	ensembl	69_37n	+1	known	silent	c.111	p.R37	0.000	prints_Pancreatis_ac	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_Pancreatis_ac	-	no_errors	REG3G	HGNC	ENSG00000143954	84	0	0.00	105	20	16.00	-	-	-
RORA	0	genome.wustl.edu	37	15	60789700	60789700	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	15	60789700	60789700	T	G	SNP	RORA	ENST00000261523	human	ensembl	69_37n	-1	known	missense	c.1625	p.E542A	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_ROR_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_ThyrH_rcpt	-	no_errors	RORA	HGNC	ENSG00000069667	89	0	0.00	42	16	27.59	-	-	-
SEL1L2	0	genome.wustl.edu	37	20	13894469	13894469	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	20	13894469	13894469	A	C	SNP	SEL1L2	ENST00000284951	human	ensembl	69_37n	-1	known	missense	c.508	p.Y170D	1.000	pfam_Sel1-like,smart_Sel1-like	pfam_Sel1-like,smart_Sel1-like	-	no_errors	SEL1L2	HGNC	ENSG00000101251	106	0	0.00	80	23	22.33	-	-	-
SLC5A7	0	genome.wustl.edu	37	2	108614411	108614411	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	2	108614411	108614411	T	A	SNP	SLC5A7	ENST00000264047	human	ensembl	69_37n	+1	known	missense	c.566	p.V189D	0.998	pfam_Na/solute_symporter,pfscan_Na/solute_symporter	pfam_Na/solute_symporter,pfscan_Na/solute_symporter	-	no_errors	SLC5A7	HGNC	ENSG00000115665	108	0	0.00	105	23	17.97	-	-	-
SNRK	0	genome.wustl.edu	37	3	43389849	43389849	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	3	43389849	43389849	G	C	SNP	SNRK	ENST00000296088	human	ensembl	69_37n	+1	known	missense	c.2098	p.A700P	0.376	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_cat_dom	-	no_errors	SNRK	HGNC	ENSG00000163788	42	0	0.00	29	9	23.68	-	-	-
STK11	0	genome.wustl.edu	37	19	1207090	1207091	+	Frame_Shift_Ins	INS	-	-	A			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	19	1207090	1207091	-	A	INS	STK11	ENST00000326873	human	ensembl	69_37n	+1	known	frame_shift_ins	c.178_179	p.Y60fs	1.000:1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	STK11	HGNC	ENSG00000118046	12	0	0.00	18	12	40.00	-	-	-
SYTL4	0	genome.wustl.edu	37	X	99956630	99956630	+	Silent	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	X	99956630	99956630	C	T	SNP	SYTL4	ENST00000454200	human	ensembl	69_37n	-1	known	silent	c.150	p.G50	0.998	superfamily_Znf_FYVE_PHD,pfscan_Rab-bd_domain	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_Znf_FYVE_PHD,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_Rab-bd_domain,prints_Synaptotagmin	-	no_errors	SYTL4	HGNC	ENSG00000102362	101	0	0.00	44	9	16.98	-	-	-
TBX1	0	genome.wustl.edu	37	22	19770438	19770438	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	22	19770438	19770438	C	A	SNP	TBX1	ENST00000359500	human	ensembl	69_37n	+1	known	missense	c.1012	p.L338M	0.002	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX1	HGNC	ENSG00000184058	28	0	0.00	47	10	17.54	-	-	-
TCF12	0	genome.wustl.edu	37	15	57458613	57458613	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	15	57458613	57458613	G	T	SNP	TCF12	ENST00000438423	human	ensembl	69_37n	+1	known	missense	c.339	p.E113D	1.000	NULL	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	TCF12	HGNC	ENSG00000140262	42	0	0.00	37	5	11.90	-	-	-
TNXB	0	genome.wustl.edu	37	6	32021331	32021331	+	Silent	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	6	32021331	32021331	C	T	SNP	TNXB	ENST00000375247	human	ensembl	69_37n	-1	known	silent	c.8619	p.L2873	0.101	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C,superfamily_Fibronectin_type3,smart_EGF-like,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	19	0	0.00	13	7	35.00	-	-	-
TPST2	0	genome.wustl.edu	37	22	26936814	26936814	+	Silent	SNP	G	G	A			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	22	26936814	26936814	G	A	SNP	TPST2	ENST00000338754	human	ensembl	69_37n	-1	known	silent	c.783	p.S261	1.000	pfam_Sulfotransferase_dom	pfam_Sulfotransferase_dom	-	no_errors	TPST2	HGNC	ENSG00000128294	49	0	0.00	13	7	35.00	-	-	-
TRMT5	0	genome.wustl.edu	37	14	61446282	61446282	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	14	61446282	61446282	A	G	SNP	TRMT5	ENST00000261249	human	ensembl	69_37n	-1	known	missense	c.334	p.S112P	1.000	NULL	pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	TRMT5	HGNC	ENSG00000126814	55	0	0.00	39	13	24.53	-	-	-
TRPM6	0	genome.wustl.edu	37	9	77377167	77377167	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	9	77377167	77377167	T	-	DEL	TRPM6	ENST00000451710	human	ensembl	69_37n	-1	known	frame_shift_del	c.4420	p.T1474fs	0.002	NULL	pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	TRPM6	HGNC	ENSG00000119121	81	0	0.00	16	19	50.00	-	-	-
TSHZ2	0	genome.wustl.edu	37	20	51871632	51871632	+	Silent	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	20	51871632	51871632	C	T	SNP	TSHZ2	ENST00000371497	human	ensembl	69_37n	+1	known	silent	c.1635	p.H545	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeodomain,pfscan_Znf_C2H2	-	no_errors	TSHZ2	HGNC	ENSG00000182463	25	0	0.00	10	11	52.38	-	-	-
WDR46	0	genome.wustl.edu	37	6	33247311	33247311	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	6	33247311	33247311	A	G	SNP	WDR46	ENST00000374617	human	ensembl	69_37n	-1	known	missense	c.1697	p.V566A	1.000	NULL	pfam_BING4_C_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR46	HGNC	ENSG00000227057	123	0	0.00	66	40	37.74	-	-	-
YEATS4	0	genome.wustl.edu	37	12	69764730	69764730	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	12	69764730	69764730	A	C	SNP	YEATS4	ENST00000247843	human	ensembl	69_37n	+1	known	missense	c.489	p.L163F	0.998	NULL	pfam_YEATS,pfscan_YEATS	-	no_errors	YEATS4	HGNC	ENSG00000127337	57	0	0.00	24	31	56.36	-	-	-
ZNF669	0	genome.wustl.edu	37	1	247265394	247265394	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	1	247265394	247265394	C	T	SNP	ZNF669	ENST00000343381	human	ensembl	69_37n	-1	known	missense	c.283	p.V95M	0.998	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF669	HGNC	ENSG00000188295	20	0	0.00	34	15	30.61	-	-	-
ZP4	0	genome.wustl.edu	37	1	238049097	238049097	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A1EN-01A-11D-A17G-09	TCGA-BH-A1EN-11A-23W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ca100ef0-be45-415f-909d-7172261d0084	ac317f91-d40e-4c6c-bca4-9220150a5af9	1	238049097	238049097	G	C	SNP	ZP4	ENST00000366570	human	ensembl	69_37n	-1	known	missense	c.929	p.T310S	0.016	pfam_Zona_pellucida_Endoglin/CD105,smart_Zona_pellucida_Endoglin/CD105,pfscan_Zona_pellucida_Endoglin/CD105	pfam_Zona_pellucida_Endoglin/CD105,pfam_P_trefoil,superfamily_P_trefoil,smart_P_trefoil,smart_Zona_pellucida_Endoglin/CD105,pfscan_Zona_pellucida_Endoglin/CD105,prints_Endoglin/CD105_subgr	-	no_errors	ZP4	HGNC	ENSG00000116996	86	0	0.00	134	29	17.79	-	-	-
