Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AHNAK2	0	genome.wustl.edu	37	14	105420425	105420425	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	14	105420425	105420425	G	T	SNP	AHNAK2	ENST00000333244	human	ensembl	69_37n	-1	known	missense	c.1363	p.L455M	0.001	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	58	0	0.00	31	20	39.22	-	-	-
CDH1	0	genome.wustl.edu	37	16	68847369	68847370	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	16	68847369	68847370	AA	-	DEL	CDH1	ENST00000261769	human	ensembl	69_37n	+1	known	frame_shift_del	c.1291_1292	p.N431fs	0.665:0.779	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH1	HGNC	ENSG00000039068	75	0	0.00	26	18	40.00	-	-	-
DCDC5	0	genome.wustl.edu	37	11	30946866	30946866	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	11	30946866	30946866	C	G	SNP	DCDC5	ENST00000339794	human	ensembl	69_37n	-1	known	missense	c.224	p.R75T	0.914	superfamily_Doublecortin_dom,pfscan_Doublecortin_dom	pfam_Ricin_B_lectin,superfamily_Doublecortin_dom,superfamily_Ricin_B_lectin,pfscan_Doublecortin_dom,pfscan_Ricin_B_lectin	-	no_errors	DCDC5	HGNC	ENSG00000170959	31	0	0.00	21	13	38.24	-	-	-
EPB41L5	0	genome.wustl.edu	37	2	120836080	120836080	+	Silent	SNP	G	G	T			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	2	120836080	120836080	G	T	SNP	EPB41L5	ENST00000263713	human	ensembl	69_37n	+1	known	silent	c.726	p.G242	0.603	pfam_FERM_PH-like_C,pfscan_FERM_domain,prints_Ez/rad/moesin	pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin	-	no_errors	EPB41L5	HGNC	ENSG00000115109	29	0	0.00	29	4	12.12	-	-	-
F11R	0	genome.wustl.edu	37	1	160970906	160970908	+	In_Frame_Del	DEL	ACA	ACA	-			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	ACA	ACA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	1	160970906	160970908	ACA	-	DEL	F11R	ENST00000436182	human	ensembl	69_37n	-1	known	in_frame_del	c.157_155	p.L52in_frame_del	0.006:0.074:0.072	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	F11R	HGNC	ENSG00000158769	42	0	0.00	57	7	10.94	-	-	-
GPAM	0	genome.wustl.edu	37	10	113923490	113923490	+	Silent	SNP	C	C	T			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	10	113923490	113923490	C	T	SNP	GPAM	ENST00000348367	human	ensembl	69_37n	-1	known	silent	c.1392	p.L464	0.996	NULL	pfam_Acyltransferase,smart_Acyltransferase	-	no_errors	GPAM	HGNC	ENSG00000119927	79	0	0.00	50	35	41.18	-	-	-
GRN	0	genome.wustl.edu	37	17	42429855	42429855	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	17	42429855	42429855	G	T	SNP	GRN	ENST00000053867	human	ensembl	69_37n	+1	known	missense	c.1560	p.E520D	0.000	NULL	pfam_Granulin,smart_Granulin	-	no_errors	GRN	HGNC	ENSG00000030582	61	0	0.00	31	4	11.43	-	-	-
HIST1H4J	0	genome.wustl.edu	37	6	27791945	27791945	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	6	27791945	27791945	G	A	SNP	HIST1H4J	ENST00000355057	human	ensembl	69_37n	+1	known	missense	c.43	p.G15S	1.000	superfamily_Histone-fold,prints_Histone_H4	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	-	no_errors	HIST1H4J	HGNC	ENSG00000197238	34	0	0.00	20	8	28.57	-	-	-
HRNR	0	genome.wustl.edu	37	1	152186614	152186614	+	Silent	SNP	C	C	G			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	1	152186614	152186614	C	G	SNP	HRNR	ENST00000368801	human	ensembl	69_37n	-1	known	silent	c.7491	p.S2497	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2	-	no_errors	HRNR	HGNC	ENSG00000197915	9	0	0.00	4	5	55.56	-	-	-
HTR3D	0	genome.wustl.edu	37	3	183753877	183753877	+	Silent	SNP	C	C	T			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	3	183753877	183753877	C	T	SNP	HTR3D	ENST00000382489	human	ensembl	69_37n	+1	known	silent	c.369	p.F123	0.838	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd	-	no_errors	HTR3D	HGNC	ENSG00000186090	31	0	0.00	21	4	16.00	-	-	-
KBTBD5	0	genome.wustl.edu	37	3	42730496	42730496	+	Silent	SNP	C	C	T			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	3	42730496	42730496	C	T	SNP	KBTBD5	ENST00000287777	human	ensembl	69_37n	+1	known	silent	c.1557	p.T519	0.730	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KBTBD5	HGNC	ENSG00000157119	30	0	0.00	25	11	30.56	-	-	-
LRRC14B	0	genome.wustl.edu	37	5	191707	191707	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	5	191707	191707	C	A	SNP	LRRC14B	ENST00000328278	human	ensembl	69_37n	+1	novel	missense	c.54	p.H18Q	0.122	NULL	NULL	-	no_errors	LRRC14B	HGNC	ENSG00000185028	58	0	0.00	43	19	30.65	-	-	-
MALAT1	0	genome.wustl.edu	37	11	65272285	65272285	+	RNA	SNP	A	A	T			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	11	65272285	65272285	A	T	SNP	MALAT1	ENST00000534336	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.454	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562	132	0	0.00	50	30	37.50	-	-	-
MAP3K1	0	genome.wustl.edu	37	5	56161268	56161269	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	5	56161268	56161269	TT	-	DEL	MAP3K1	ENST00000399503	human	ensembl	69_37n	+1	novel	frame_shift_del	c.1137_1138	p.L380fs	0.761:0.988	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	62	0	0.00	48	21	30.43	-	-	-
MED12	0	genome.wustl.edu	37	X	70345260	70345260	+	Silent	SNP	G	G	A			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	X	70345260	70345260	G	A	SNP	MED12	ENST00000333646	human	ensembl	69_37n	+1	known	silent	c.2286	p.K762	1.000	NULL	pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12_catenin-bd,pfam_Mediator_Med12	-	no_errors	MED12	HGNC	ENSG00000184634	68	0	0.00	42	37	46.84	-	-	-
OR2T4	0	genome.wustl.edu	37	1	248524975	248524975	+	Silent	SNP	T	T	C			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	1	248524975	248524975	T	C	SNP	OR2T4	ENST00000366475	human	ensembl	69_37n	+1	known	silent	c.93	p.N31	0.074	NULL	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2T4	HGNC	ENSG00000196944	65	0	0.00	65	14	17.72	-	-	-
PCDHGA8	0	genome.wustl.edu	37	5	140773952	140773952	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	5	140773952	140773952	G	T	SNP	PCDHGA8	ENST00000398604	human	ensembl	69_37n	+1	known	missense	c.1572	p.Q524H	0.964	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA8	HGNC	ENSG00000253767	39	0	0.00	31	20	39.22	-	-	-
PHLDB1	0	genome.wustl.edu	37	11	118499208	118499208	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	11	118499208	118499208	T	C	SNP	PHLDB1	ENST00000361417	human	ensembl	69_37n	+1	known	missense	c.1669	p.C557R	0.996	NULL	pfam_Pleckstrin_homology,superfamily_SMAD_FHA_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB1	HGNC	ENSG00000019144	52	0	0.00	44	6	12.00	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	21	0	0.00	11	7	38.89	-	-	-
RASSF7	0	genome.wustl.edu	37	11	563307	563307	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	11	563307	563307	C	G	SNP	RASSF7	ENST00000344375	human	ensembl	69_37n	+1	known	missense	c.941	p.P314R	0.000	NULL	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc	-	no_errors	RASSF7	HGNC	ENSG00000099849	38	0	0.00	20	7	25.93	-	-	-
RNF31	0	genome.wustl.edu	37	14	24620062	24620062	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	14	24620062	24620062	C	T	SNP	RNF31	ENST00000324103	human	ensembl	69_37n	+1	known	missense	c.1453	p.R485W	1.000	NULL	pfam_PUB_domain,pfam_Znf_C6HC,superfamily_UBA-like,superfamily_DEATH-like,superfamily_Znf_FYVE_PHD,smart_Znf_RanBP2,smart_Znf_C6HC,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RanBP2	-	no_errors	RNF31	HGNC	ENSG00000092098	63	0	0.00	40	27	40.30	-	-	-
SAFB2	0	genome.wustl.edu	37	19	5621340	5621340	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	19	5621340	5621340	G	A	SNP	SAFB2	ENST00000252542	human	ensembl	69_37n	-1	known	missense	c.254	p.S85L	0.041	NULL	pfam_RRM_dom,pfam_SAP_DNA-bd,smart_SAP_DNA-bd,smart_RRM_dom,pfscan_SAP_DNA-bd,pfscan_RRM_dom	-	no_errors	SAFB2	HGNC	ENSG00000130254	48	0	0.00	35	14	28.57	-	-	-
SCYL2	0	genome.wustl.edu	37	12	100711639	100711639	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	12	100711639	100711639	A	G	SNP	SCYL2	ENST00000360820	human	ensembl	69_37n	+1	known	missense	c.1331	p.E444G	1.000	superfamily_ARM-type_fold	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	SCYL2	HGNC	ENSG00000136021	40	0	0.00	26	19	42.22	-	-	-
SHISA9	0	genome.wustl.edu	37	16	13329127	13329127	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	16	13329127	13329127	G	A	SNP	SHISA9	ENST00000558583	human	ensembl	69_37n	+1	known	missense	c.1259	p.R420Q	1.000	NULL	NULL	-	no_errors	SHISA9	HGNC	ENSG00000237515	72	0	0.00	42	40	48.78	-	-	-
SLC43A3	0	genome.wustl.edu	37	11	57182167	57182167	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	11	57182167	57182167	G	A	SNP	SLC43A3	ENST00000525205	human	ensembl	69_37n	-1	known	missense	c.293	p.S98L	0.998	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SLC43A3	HGNC	ENSG00000134802	47	0	0.00	33	13	28.26	-	-	-
ST5	0	genome.wustl.edu	37	11	8752457	8752457	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	11	8752457	8752457	C	T	SNP	ST5	ENST00000313726	human	ensembl	69_37n	-1	known	missense	c.380	p.G127E	0.339	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	ST5	HGNC	ENSG00000166444	44	0	0.00	32	7	17.95	-	-	-
TERT	0	genome.wustl.edu	37	5	1266600	1266600	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	5	1266600	1266600	G	T	SNP	TERT	ENST00000310581	human	ensembl	69_37n	-1	known	missense	c.2633	p.T878N	0.000	pfam_RVT,pfscan_RVT	pfam_Telomerase_RBD,pfam_RVT,smart_Telomerase_RBD,prints_Telomerase_RT,pfscan_RVT	-	no_errors	TERT	HGNC	ENSG00000164362	48	0	0.00	29	6	17.14	-	-	-
TH1L	0	genome.wustl.edu	37	20	57561249	57561249	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	20	57561249	57561249	C	-	DEL	TH1L	ENST00000344018	human	ensembl	69_37n	+1	known	frame_shift_del	c.189	p.F63fs	0.996	pfam_TH1	pfam_TH1	-	no_errors	TH1L	HGNC	ENSG00000101158	72	0	0.00	45	6	11.54	-	-	-
TIMMDC1	0	genome.wustl.edu	37	3	119217721	119217721	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	3	119217721	119217721	G	T	SNP	TIMMDC1	ENST00000494664	human	ensembl	69_37n	+1	known	missense	c.141	p.E47D	0.000	NULL	pfam_Tim17/Tim22/Tim23/PMP24	-	no_errors	TIMMDC1	HGNC	ENSG00000113845	35	0	0.00	35	4	10.00	-	-	-
TSHZ1	0	genome.wustl.edu	37	18	72999964	72999964	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	18	72999964	72999964	G	A	SNP	TSHZ1	ENST00000580243	human	ensembl	69_37n	+1	known	missense	c.2602	p.D868N	0.998	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeodomain,pfscan_Znf_C2H2	-	no_errors	TSHZ1	HGNC	ENSG00000179981	28	0	0.00	14	5	26.32	-	-	-
TXNDC11	0	genome.wustl.edu	37	16	11792024	11792024	+	Missense_Mutation	SNP	A	A	C			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	16	11792024	11792024	A	C	SNP	TXNDC11	ENST00000356957	human	ensembl	69_37n	-1	known	missense	c.1145	p.I382R	1.000	NULL	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC11	HGNC	ENSG00000153066	36	0	0.00	43	5	10.42	-	-	-
WASH6P	0	genome.wustl.edu	37	X	155251726	155251726	+	Silent	SNP	G	G	C			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	X	155251726	155251726	G	C	SNP	WASH6P	ENST00000359512	human	ensembl	69_37n	+1	known	silent	c.363	p.T121	0.993	NULL	pfam_WASH_WASD	-	no_errors	WASH6P	HGNC	ENSG00000182484	9	0	0.00	4	4	50.00	-	-	-
YTHDF1	0	genome.wustl.edu	37	20	61834861	61834861	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	20	61834861	61834861	C	T	SNP	YTHDF1	ENST00000370339	human	ensembl	69_37n	-1	known	missense	c.431	p.S144N	1.000	NULL	pfam_YTH_domain,pfscan_YTH_domain	-	no_errors	YTHDF1	HGNC	ENSG00000149658	51	0	0.00	53	12	18.18	-	-	-
ZNF439	0	genome.wustl.edu	37	19	11959677	11959677	+	RNA	SNP	T	T	C			TCGA-D8-A3Z6-01A-11D-A23C-09	TCGA-D8-A3Z6-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	67a233d6-6e32-4224-a9af-c5579672d155	0ca11874-f9f6-4631-9a0a-1814a35f238c	19	11959677	11959677	T	C	SNP	ZNF439	ENST00000592534	human	ensembl	69_37n	+1	putative	rna	NULL	NULL	0.011	-	-	-	no_errors	ZNF439	HGNC	ENSG00000171291	25	0	0.00	7	5	41.67	-	-	-
