Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABI1	0	genome.wustl.edu	37	10	27052815	27052815	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	10	27052815	27052815	C	A	SNP	ABI1	ENST00000355394	human	ensembl	69_37n	-1	known	missense	c.898	p.V300L	1.000	NULL	pfam_Abl-interactor_HHR_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,pfscan_T_SNARE_dom,prints_SH3_domain,prints_p67phox	-	no_errors	ABI1	HGNC	ENSG00000136754	320	0	0.00	331	77	18.87	-	-	-
ACOX1	0	genome.wustl.edu	37	17	73956312	73956312	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	17	73956312	73956312	C	G	SNP	ACOX1	ENST00000293217	human	ensembl	69_37n	-1	known	missense	c.414	p.Q138H	1.000	pfam_Acyl-CoA_Oxase/DH_cen-dom,superfamily_AcylCoA_DH/oxidase,pirsf_Acyl-CoA_oxidase	pfam_Acyl-CoA_oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,superfamily_AcylCo_DH/oxidase_C,superfamily_AcylCoA_DH/oxidase,pirsf_Acyl-CoA_oxidase	-	no_errors	ACOX1	HGNC	ENSG00000161533	119	0	0.00	100	26	20.47	-	-	-
AKAP9	0	genome.wustl.edu	37	7	91632139	91632139	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	7	91632139	91632139	C	G	SNP	AKAP9	ENST00000359028	human	ensembl	69_37n	+1	known	missense	c.2944	p.H982D	0.925	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB-like	-	no_errors	AKAP9	HGNC	ENSG00000127914	108	0	0.00	105	17	13.93	-	-	-
ATP11A	0	genome.wustl.edu	37	13	113488902	113488902	+	Splice_Site	SNP	G	G	C			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	13	113488902	113488902	G	C	SNP	ATP11A	ENST00000375630	human	ensembl	69_37n	+1	known	splice_site	c.1560-1	e15-1	1.000	-	-	-	no_errors	ATP11A	HGNC	ENSG00000068650	267	0	0.00	185	51	21.61	-	-	-
ATRN	0	genome.wustl.edu	37	20	3527932	3527932	+	Missense_Mutation	SNP	T	T	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	20	3527932	3527932	T	A	SNP	ATRN	ENST00000262919	human	ensembl	69_37n	+1	known	missense	c.739	p.F247I	1.000	superfamily_CUB,smart_CUB,pfscan_CUB,pfscan_EG-like_dom	pfam_Kelch_1,pfam_Plexin_repeat,pfam_CUB,superfamily_C-type_lectin_fold,superfamily_CUB,superfamily_Plexin-like_fold,smart_EGF-like,smart_CUB,smart_Plexin-like,smart_C-type_lectin,smart_EGF_laminin,pfscan_CUB,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_C-type_lectin	-	no_errors	ATRN	HGNC	ENSG00000088812	640	0	0.00	341	121	26.02	-	-	-
BZRAP1	0	genome.wustl.edu	37	17	56384995	56384995	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	17	56384995	56384995	A	C	SNP	BZRAP1	ENST00000355701	human	ensembl	69_37n	-1	known	missense	c.4960	p.F1654V	1.000	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain	-	no_errors	BZRAP1	HGNC	ENSG00000005379	212	0	0.00	135	26	16.15	-	-	-
CACNA1F	0	genome.wustl.edu	37	X	49065681	49065681	+	Missense_Mutation	SNP	T	T	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	X	49065681	49065681	T	A	SNP	CACNA1F	ENST00000486943	human	ensembl	69_37n	-1	putative	missense	c.257	p.K86I	0.015	NULL	NULL	-	no_start_codon	CACNA1F	HGNC	ENSG00000102001	504	0	0.00	314	83	20.85	-	-	-
CCDC3	0	genome.wustl.edu	37	10	13043199	13043199	+	Silent	SNP	G	G	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	10	13043199	13043199	G	A	SNP	CCDC3	ENST00000378825	human	ensembl	69_37n	-1	known	silent	c.372	p.L124	1.000	NULL	NULL	-	no_errors	CCDC3	HGNC	ENSG00000151468	8	0	0.00	7	4	36.36	-	-	-
CCDC69	0	genome.wustl.edu	37	5	150566946	150566946	+	Splice_Site	SNP	C	C	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	5	150566946	150566946	C	A	SNP	CCDC69	ENST00000355417	human	ensembl	69_37n	-1	known	splice_site	c.393+1	e5+1	1.000	-	-	-	no_errors	CCDC69	HGNC	ENSG00000198624	254	1	0.39	138	41	22.78	-	-	-
CDK5RAP1	0	genome.wustl.edu	37	20	31961928	31961928	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	20	31961928	31961928	G	A	SNP	CDK5RAP1	ENST00000357886	human	ensembl	69_37n	-1	known	missense	c.1240	p.R414W	1.000	pfam_rSAM,smart_Elp3/MiaB/NifB,tigrfam_MiaB_methiolase,tigrfam_Methylthiotransferase	pfam_rSAM,pfam_Methylthiotransferase_N,pfam_TRAM_dom,smart_Elp3/MiaB/NifB,pfscan_TRAM_dom,tigrfam_MiaB_methiolase,tigrfam_Methylthiotransferase	-	no_errors	CDK5RAP1	HGNC	ENSG00000101391	205	0	0.00	147	24	14.04	-	-	-
CEP68	0	genome.wustl.edu	37	2	65298808	65298808	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	2	65298808	65298808	C	T	SNP	CEP68	ENST00000377990	human	ensembl	69_37n	+1	known	missense	c.578	p.P193L	0.000	NULL	NULL	-	no_errors	CEP68	HGNC	ENSG00000011523	82	0	0.00	62	9	12.50	-	-	-
CSMD2	0	genome.wustl.edu	37	1	34554791	34554791	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	1	34554791	34554791	T	C	SNP	CSMD2	ENST00000373381	human	ensembl	69_37n	-1	known	missense	c.191	p.Q64R	1.000	NULL	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	225	1	0.44	155	21	11.80	-	-	-
CTSS	0	genome.wustl.edu	37	1	150722597	150722597	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	1	150722597	150722597	C	A	SNP	CTSS	ENST00000368985	human	ensembl	69_37n	-1	known	missense	c.678	p.K226N	0.946	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C	pfam_Peptidase_C1A_C,pfam_Prot_inhib_I29,smart_Prot_inhib_I29,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSS	HGNC	ENSG00000163131	279	0	0.00	247	55	18.21	-	-	-
CUL5	0	genome.wustl.edu	37	11	107965573	107965573	+	Silent	SNP	C	C	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	11	107965573	107965573	C	T	SNP	CUL5	ENST00000393094	human	ensembl	69_37n	+1	known	silent	c.1602	p.G534	1.000	pfam_Cullin_N,superfamily_Cullin_homology,smart_Cullin_homology,pfscan_Cullin_homology	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL5	HGNC	ENSG00000166266	116	0	0.00	89	35	28.23	-	-	-
F7	0	genome.wustl.edu	37	13	113771885	113771885	+	Silent	SNP	C	C	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	13	113771885	113771885	C	T	SNP	F7	ENST00000375581	human	ensembl	69_37n	+1	known	silent	c.780	p.N260	0.000	pirsf_Pept_S1A_FX,pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pirsf_Pept_S1A_FX,pfam_Peptidase_S1_S6,pfam_GLA_domain,pfam_Peptidase_S1A_nudel,pfam_EGF-like_dom,superfamily_Pept_cys/ser_Trypsin-like,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd,smart_EGF-like,smart_Peptidase_S1_S6,prints_Peptidase_S1A,prints_GLA_domain,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Peptidase_S1_S6	-	no_errors	F7	HGNC	ENSG00000057593	258	0	0.00	194	24	10.96	-	-	-
FAM108A1	0	genome.wustl.edu	37	19	1877565	1877565	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	19	1877565	1877565	C	A	SNP	FAM108A1	ENST00000250974	human	ensembl	69_37n	-1	known	missense	c.802	p.G268C	1.000	pfam_Dienelactn_hydro	pfam_Dienelactn_hydro	-	no_errors	FAM108A1	HGNC	ENSG00000129968	44	0	0.00	16	4	20.00	-	-	-
FAM124A	0	genome.wustl.edu	37	13	51854669	51854669	+	Silent	SNP	G	G	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	13	51854669	51854669	G	A	SNP	FAM124A	ENST00000280057	human	ensembl	69_37n	+1	known	silent	c.1026	p.P342	0.000	NULL	NULL	-	no_errors	FAM124A	HGNC	ENSG00000150510	171	0	0.00	123	31	19.75	-	-	-
FAM171B	0	genome.wustl.edu	37	2	187626606	187626606	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	2	187626606	187626606	A	T	SNP	FAM171B	ENST00000304698	human	ensembl	69_37n	+1	known	missense	c.1537	p.R513W	0.944	pfam_Uncharacterised_FAM171	pfam_Uncharacterised_FAM171	-	no_errors	FAM171B	HGNC	ENSG00000144369	293	0	0.00	227	92	28.75	-	-	-
GANAB	0	genome.wustl.edu	37	11	62400200	62400200	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	11	62400200	62400200	C	G	SNP	GANAB	ENST00000346178	human	ensembl	69_37n	-1	known	missense	c.899	p.R300P	1.000	superfamily_Glyco_hydro-type_carb-bd	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF,superfamily_Glyco_hydro-type_carb-bd	-	no_errors	GANAB	HGNC	ENSG00000089597	141	0	0.00	82	27	24.77	-	-	-
GYG2	0	genome.wustl.edu	37	X	2774660	2774660	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	X	2774660	2774660	C	G	SNP	GYG2	ENST00000381163	human	ensembl	69_37n	+1	known	missense	c.702	p.F234L	1.000	pfam_Glyco_trans_8	pfam_Glyco_trans_8	-	no_errors	GYG2	HGNC	ENSG00000056998	158	0	0.00	81	16	16.49	-	-	-
HPSE	0	genome.wustl.edu	37	4	84234382	84234382	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	4	84234382	84234382	A	T	SNP	HPSE	ENST00000311412	human	ensembl	69_37n	-1	known	missense	c.558	p.F186L	1.000	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	-	no_errors	HPSE	HGNC	ENSG00000173083	234	0	0.00	212	53	20.00	-	-	-
HTR5A	0	genome.wustl.edu	37	7	154862779	154862779	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	7	154862779	154862779	G	T	SNP	HTR5A	ENST00000287907	human	ensembl	69_37n	+1	known	missense	c.170	p.W57L	1.000	pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_5HT5A_rcpt,prints_5HT_rcpt	-	no_errors	HTR5A	HGNC	ENSG00000157219	124	0	0.00	58	9	13.43	-	-	-
IL27	0	genome.wustl.edu	37	16	28511052	28511052	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	16	28511052	28511052	C	G	SNP	IL27	ENST00000356897	human	ensembl	69_37n	-1	known	missense	c.652	p.V218L	0.722	superfamily_4_helix_cytokine-like_core	superfamily_4_helix_cytokine-like_core	-	no_errors	IL27	HGNC	ENSG00000197272	115	0	0.00	48	10	17.24	-	-	-
KDM3B	0	genome.wustl.edu	37	5	137771360	137771360	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	5	137771360	137771360	G	A	SNP	KDM3B	ENST00000314358	human	ensembl	69_37n	+1	known	missense	c.5257	p.A1753T	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM3B	HGNC	ENSG00000120733	255	0	0.00	163	48	22.75	-	-	-
LPPR3	0	genome.wustl.edu	37	19	815750	815750	+	Silent	SNP	G	G	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	19	815750	815750	G	A	SNP	LPPR3	ENST00000359894	human	ensembl	69_37n	-1	known	silent	c.177	p.L59	0.997	superfamily_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	hsa-mir-3187	miRBase	ENSG00000129951	88	0	0.00	56	12	17.39	-	-	-
MGAM	0	genome.wustl.edu	37	7	141705436	141705436	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	7	141705436	141705436	A	G	SNP	MGAM	ENST00000549489	human	ensembl	69_37n	+1	known	missense	c.106	p.K36E	0.014	NULL	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Glyco_hydro-type_carb-bd,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335	538	1	0.19	469	91	16.22	-	-	-
MID2	0	genome.wustl.edu	37	X	107170052	107170052	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	X	107170052	107170052	C	G	SNP	MID2	ENST00000262843	human	ensembl	69_37n	+1	known	missense	c.1957	p.R653G	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	MID2	HGNC	ENSG00000080561	407	0	0.00	273	67	19.71	-	-	-
MLLT3	0	genome.wustl.edu	37	9	20620668	20620668	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	9	20620668	20620668	G	A	SNP	MLLT3	ENST00000380338	human	ensembl	69_37n	-1	known	missense	c.178	p.P60S	1.000	pfam_YEATS,pfscan_YEATS	pfam_YEATS,pfscan_YEATS	-	no_errors	MLLT3	HGNC	ENSG00000171843	148	0	0.00	118	19	13.77	-	-	-
MRGPRX3	0	genome.wustl.edu	37	11	18159472	18159472	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	11	18159472	18159472	G	T	SNP	MRGPRX3	ENST00000396275	human	ensembl	69_37n	+1	known	missense	c.723	p.R241S	0.211	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	-	no_errors	MRGPRX3	HGNC	ENSG00000179826	388	0	0.00	316	73	18.77	-	-	-
MYO18B	0	genome.wustl.edu	37	22	26423470	26423470	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	22	26423470	26423470	A	T	SNP	MYO18B	ENST00000543971	human	ensembl	69_37n	+1	novel	missense	c.1379	p.H460L	0.558	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	MYO18B	HGNC	ENSG00000133454	141	0	0.00	87	39	30.95	-	-	-
MYO9A	0	genome.wustl.edu	37	15	72338876	72338876	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	15	72338876	72338876	C	T	SNP	MYO9A	ENST00000424560	human	ensembl	69_37n	-1	known	missense	c.29	p.R10H	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_RhoGAP_dom,pfam_Ras-assoc,pfam_IQ_motif_EF-hand-BS,superfamily_Rho_GTPase_activation_prot,smart_Ras-assoc,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_IQ_motif_EF-hand-BS,pfscan_Ras-assoc,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO9A	HGNC	ENSG00000066933	267	0	0.00	183	53	22.46	-	-	-
NUMBL	0	genome.wustl.edu	37	19	41173774	41173774	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	19	41173774	41173774	C	A	SNP	NUMBL	ENST00000252891	human	ensembl	69_37n	-1	known	missense	c.1429	p.V477L	1.000	pirsf_Numb/numb-like	pfam_Numb_domain,pfam_PTyr_interaction_dom,pfam_PTB,smart_PTyr_interaction_dom,pirsf_Numb/numb-like,pfscan_PTyr_interaction_dom	-	no_errors	NUMBL	HGNC	ENSG00000105245	15	0	0.00	11	4	26.67	-	-	-
PCMTD2	0	genome.wustl.edu	37	20	62899355	62899355	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	20	62899355	62899355	T	C	SNP	PCMTD2	ENST00000308824	human	ensembl	69_37n	+1	known	missense	c.698	p.V233A	1.000	NULL	pfam_PCMT	-	no_errors	PCMTD2	HGNC	ENSG00000203880	300	0	0.00	210	64	23.36	-	-	-
PIP5K1A	0	genome.wustl.edu	37	1	151209081	151209081	+	Silent	SNP	C	C	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	1	151209081	151209081	C	T	SNP	PIP5K1A	ENST00000368888	human	ensembl	69_37n	+1	known	silent	c.987	p.I329	1.000	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP5K1A	HGNC	ENSG00000143398	125	0	0.00	104	22	17.46	-	-	-
PLEKHN1	0	genome.wustl.edu	37	1	906108	906108	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	1	906108	906108	G	T	SNP	PLEKHN1	ENST00000379409	human	ensembl	69_37n	+1	known	missense	c.454	p.G152W	0.379	smart_Pleckstrin_homology	smart_Pleckstrin_homology	-	no_errors	PLEKHN1	HGNC	ENSG00000187583	36	0	0.00	37	16	30.19	-	-	-
PROX2	0	genome.wustl.edu	37	14	75329577	75329577	+	Missense_Mutation	SNP	T	T	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	14	75329577	75329577	T	A	SNP	PROX2	ENST00000445876	human	ensembl	69_37n	-1	known	missense	c.961	p.T321S	0.002	NULL	pfam_Prox1,superfamily_Homeodomain-like	-	no_errors	PROX2	HGNC	ENSG00000119608	244	1	0.40	214	29	11.51	-	-	-
PTCH1	0	genome.wustl.edu	37	9	98221930	98221930	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	9	98221930	98221930	C	G	SNP	PTCH1	ENST00000331920	human	ensembl	69_37n	-1	known	missense	c.2839	p.E947Q	1.000	pfam_Patched,tigrfam_TM_rcpt_patched	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	-	no_errors	PTCH1	HGNC	ENSG00000185920	398	0	0.00	241	131	35.22	-	-	-
PTCHD3	0	genome.wustl.edu	37	10	27700858	27700858	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	10	27700858	27700858	C	A	SNP	PTCHD3	ENST00000438700	human	ensembl	69_37n	-1	known	missense	c.1090	p.V364L	0.998	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD3	HGNC	ENSG00000182077	151	0	0.00	146	27	15.61	-	-	-
RANBP3	0	genome.wustl.edu	37	19	5917932	5917932	+	Silent	SNP	C	C	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	19	5917932	5917932	C	T	SNP	RANBP3	ENST00000340578	human	ensembl	69_37n	-1	known	silent	c.1533	p.L511	1.000	NULL	pfam_Ran_bind_dom,smart_Ran_bind_dom,pfscan_Ran_bind_dom	-	no_errors	RANBP3	HGNC	ENSG00000031823	44	0	0.00	29	8	21.62	-	-	-
RIMKLA	0	genome.wustl.edu	37	1	42875811	42875811	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	1	42875811	42875811	T	C	SNP	RIMKLA	ENST00000431473	human	ensembl	69_37n	+1	known	missense	c.638	p.M213T	1.000	pfam_ATP-grasp_RimK-type,pfam_GSHS_ATP-bd,pfam_ATP-grasp_DUF201-type,pfscan_ATP-grasp,tigrfam_RpS6_RimK/Lys_biosynth_LsyX	pfam_ATP-grasp_RimK-type,pfam_GSHS_ATP-bd,pfam_ATP-grasp_DUF201-type,pfscan_ATP-grasp,tigrfam_RpS6_RimK/Lys_biosynth_LsyX	-	no_errors	RIMKLA	HGNC	ENSG00000177181	326	0	0.00	335	42	11.14	-	-	-
RNF10	0	genome.wustl.edu	37	12	120995476	120995476	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	12	120995476	120995476	C	T	SNP	RNF10	ENST00000413266	human	ensembl	69_37n	+1	known	missense	c.958	p.H320Y	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF10	HGNC	ENSG00000022840	583	2	0.34	359	135	27.27	-	-	-
RSPH3	0	genome.wustl.edu	37	6	159401878	159401878	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	6	159401878	159401878	G	C	SNP	RSPH3	ENST00000252655	human	ensembl	69_37n	-1	known	missense	c.1213	p.L405V	1.000	pfam_Radial_spoke_3	pfam_Radial_spoke_3	-	no_errors	RSPH3	HGNC	ENSG00000130363	504	0	0.00	366	59	13.85	-	-	-
RTL1	0	genome.wustl.edu	37	14	101350779	101350779	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	14	101350779	101350779	C	T	SNP	RTL1	ENST00000534062	human	ensembl	69_37n	-1	known	missense	c.347	p.G116E	0.000	NULL	pfam_Retrotrans_gag,superfamily_Peptidase_aspartic	-	no_errors	RTL1	HGNC	ENSG00000254656	242	0	0.00	138	17	10.97	-	-	-
RXRA	0	genome.wustl.edu	37	9	137309062	137309062	+	Silent	SNP	C	C	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	9	137309062	137309062	C	T	SNP	RXRA	ENST00000481739	human	ensembl	69_37n	+1	known	silent	c.669	p.T223	0.959	superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_DUF3345,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoid-X_rcpt/HNF4,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_COUP_TF,prints_Retinoic_acid_rcpt	-	no_errors	RXRA	HGNC	ENSG00000186350	70	0	0.00	30	13	30.23	-	-	-
SAMD9	0	genome.wustl.edu	37	7	92733023	92733023	+	Silent	SNP	G	G	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	7	92733023	92733023	G	T	SNP	SAMD9	ENST00000379958	human	ensembl	69_37n	-1	known	silent	c.2388	p.L796	0.993	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD9	HGNC	ENSG00000205413	201	0	0.00	194	34	14.85	-	-	-
SH3GL2	0	genome.wustl.edu	37	9	17795652	17795652	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	9	17795652	17795652	G	A	SNP	SH3GL2	ENST00000380607	human	ensembl	69_37n	+1	known	missense	c.970	p.D324N	1.000	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain,prints_Spectrin_alpha_SH3	pfam_BAR_dom,pfam_SH3_2,pfam_SH3_domain,pfam_BAR_dom-cont,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,prints_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SH3GL2	HGNC	ENSG00000107295	407	0	0.00	370	56	13.15	-	-	-
SLC5A9	0	genome.wustl.edu	37	1	48699331	48699331	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	1	48699331	48699331	G	A	SNP	SLC5A9	ENST00000425816	human	ensembl	69_37n	+1	known	missense	c.832	p.G278S	0.992	NULL	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A9	HGNC	ENSG00000117834	267	0	0.00	224	53	19.13	-	-	-
SPRR3	0	genome.wustl.edu	37	1	152975898	152975898	+	Silent	SNP	T	T	G			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	1	152975898	152975898	T	G	SNP	SPRR3	ENST00000295367	human	ensembl	69_37n	+1	known	silent	c.402	p.P134	0.897	pfam_Cornifin	pfam_Cornifin	-	no_errors	SPRR3	HGNC	ENSG00000163209	282	0	0.00	213	24	10.13	-	-	-
SSR1	0	genome.wustl.edu	37	6	7301667	7301667	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	6	7301667	7301667	A	G	SNP	SSR1	ENST00000244763	human	ensembl	69_37n	-1	known	missense	c.419	p.L140P	1.000	pfam_TRAP_alpha	pfam_TRAP_alpha	-	no_errors	SSR1	HGNC	ENSG00000124783	274	0	0.00	244	40	14.08	-	-	-
SYCP2L	0	genome.wustl.edu	37	6	10935310	10935310	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	6	10935310	10935310	C	A	SNP	SYCP2L	ENST00000283141	human	ensembl	69_37n	+1	known	nonsense	c.1703	p.S568*	0.000	NULL	NULL	-	no_errors	SYCP2L	HGNC	ENSG00000153157	319	0	0.00	250	88	26.04	-	-	-
THNSL1	0	genome.wustl.edu	37	10	25313398	25313398	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	10	25313398	25313398	C	T	SNP	THNSL1	ENST00000376356	human	ensembl	69_37n	+1	known	nonsense	c.1246	p.Q416*	1.000	pfam_PyrdxlP-dep_enz_bsu,superfamily_PyrdxlP-dep_enz_bsu,tigrfam_Thr_synthase	pfam_Shikimate_kinase,pfam_PyrdxlP-dep_enz_bsu,superfamily_PyrdxlP-dep_enz_bsu,prints_Shikimate_kinase,tigrfam_Thr_synthase	-	no_errors	THNSL1	HGNC	ENSG00000185875	536	0	0.00	425	95	18.27	-	-	-
TP53	0	genome.wustl.edu	37	17	7578263	7578263	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	17	7578263	7578263	G	A	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	nonsense	c.586	p.R196*	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	373	0	0.00	198	67	25.28	-	-	-
TRABD2A	0	genome.wustl.edu	37	2	85097456	85097456	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	2	85097456	85097456	A	C	SNP	TRABD2A	ENST00000409520	human	ensembl	69_37n	-1	known	missense	c.562	p.L188V	1.000	NULL	NULL	-	no_errors	TRABD2A	HGNC	ENSG00000186854	181	0	0.00	152	20	11.63	-	-	-
TTC29	0	genome.wustl.edu	37	4	147724636	147724636	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	4	147724636	147724636	C	G	SNP	TTC29	ENST00000398886	human	ensembl	69_37n	-1	known	missense	c.1381	p.G461R	0.983	NULL	smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC29	HGNC	ENSG00000137473	385	0	0.00	312	44	12.36	-	-	-
UGT2A1	0	genome.wustl.edu	37	4	70455314	70455314	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	4	70455314	70455314	G	T	SNP	UGT2A1	ENST00000457664	human	ensembl	69_37n	-1	known	missense	c.1387	p.P463T	1.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2A1	HGNC	ENSG00000173610	364	1	0.27	309	65	17.38	-	-	-
XPO1	0	genome.wustl.edu	37	2	61710129	61710129	+	Silent	SNP	A	A	G			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	2	61710129	61710129	A	G	SNP	XPO1	ENST00000401558	human	ensembl	69_37n	-1	known	silent	c.2775	p.H925	1.000	pfam_CRM1_C_dom,superfamily_ARM-type_fold	pfam_CRM1_C_dom,pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	XPO1	HGNC	ENSG00000082898	254	0	0.00	221	50	18.45	-	-	-
ZNF625	0	genome.wustl.edu	37	19	12256170	12256170	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14N-01A-31D-A135-09	TCGA-E2-A14N-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	00c8d151-2223-4e36-8c66-6c09e42d8777	d2ad26e4-a4a8-45de-9f85-c681a2a49f43	19	12256170	12256170	G	C	SNP	ZNF625	ENST00000439556	human	ensembl	69_37n	-1	known	missense	c.1061	p.T354S	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF625	Clone_based_vega_gene	ENSG00000257591	331	0	0.00	277	65	19.01	-	-	-
