Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AMMECR1	0	genome.wustl.edu	37	X	109561207	109561209	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	X	109561207	109561209	GGA	-	DEL	AMMECR1	ENST00000262844	human	ensembl	69_37n	-1	known	in_frame_del	c.93_91	p.S31in_frame_del	0.359:0.594:0.602	NULL	pfam_AMMECR1_domain,pfscan_AMMECR1_domain,tigrfam_AMMECR1	-	no_errors	AMMECR1	HGNC	ENSG00000101935	9	0	0.00	6	2	25.00	-	-	-
ARHGAP11A	0	genome.wustl.edu	37	15	32929250	32929250	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	15	32929250	32929250	C	A	SNP	ARHGAP11A	ENST00000361627	human	ensembl	69_37n	+1	known	missense	c.2276	p.A759D	0.007	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP11A	HGNC	ENSG00000198826	33	0	0.00	19	26	57.78	-	-	-
ASTN2	0	genome.wustl.edu	37	9	119188282	119188282	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	9	119188282	119188282	C	T	SNP	ASTN2	ENST00000313400	human	ensembl	69_37n	-1	known	missense	c.3868	p.V1290M	0.996	NULL	pfam_MACPF,superfamily_Fibronectin_type3,smart_MACPF	-	no_errors	ASTN2	HGNC	ENSG00000148219	94	0	0.00	28	84	75.00	-	-	-
BTBD6	0	genome.wustl.edu	37	14	105716214	105716214	+	Silent	SNP	C	C	T			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	14	105716214	105716214	C	T	SNP	BTBD6	ENST00000392554	human	ensembl	69_37n	+1	known	silent	c.663	p.S221	0.003	pfam_BACK,smart_BACK	pfam_PHR,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD6	HGNC	ENSG00000184887	21	0	0.00	24	17	41.46	-	-	-
C1orf185	0	genome.wustl.edu	37	1	51584393	51584393	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	1	51584393	51584393	C	T	SNP	C1orf185	ENST00000371759	human	ensembl	69_37n	+1	known	missense	c.178	p.P60S	0.133	NULL	NULL	-	no_errors	C1orf185	HGNC	ENSG00000204006	41	0	0.00	36	56	60.87	-	-	-
COL1A1	0	genome.wustl.edu	37	17	48267939	48267939	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	17	48267939	48267939	C	T	SNP	COL1A1	ENST00000225964	human	ensembl	69_37n	-1	known	missense	c.2362	p.G788S	1.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL1A1	HGNC	ENSG00000108821	100	0	0.00	98	78	44.32	-	-	-
DAZAP1	0	genome.wustl.edu	37	19	1418354	1418354	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	19	1418354	1418354	G	T	SNP	DAZAP1	ENST00000591830	human	ensembl	69_37n	+1	novel	missense	c.50	p.R17L	0.140	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	DAZAP1	HGNC	ENSG00000071626	30	0	0.00	42	12	22.22	-	-	-
DHX32	0	genome.wustl.edu	37	10	127530353	127530353	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	10	127530353	127530353	T	G	SNP	DHX32	ENST00000284690	human	ensembl	69_37n	-1	known	missense	c.1502	p.D501A	1.000	pfam_Helicase-assoc_dom,smart_Helicase-assoc_dom	pfam_Helicase-assoc_dom,pfam_DUF1605,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd	-	no_errors	DHX32	HGNC	ENSG00000089876	43	0	0.00	93	69	42.33	-	-	-
EIF5	0	genome.wustl.edu	37	14	103802230	103802230	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	14	103802230	103802230	C	G	SNP	EIF5	ENST00000216554	human	ensembl	69_37n	+1	known	missense	c.33	p.D11E	1.000	pfam_Transl_init_fac_IF2/IF5,superfamily_Transl_init_fac_IF2/IF5_N	pfam_Transl_init_fac_IF2/IF5,pfam_W2_domain,superfamily_ARM-type_fold,superfamily_Transl_init_fac_IF2/IF5_N,superfamily_Transl_init_fac_IF2/IF5_Zn-bd,smart_Transl_init_fac_IF2/IF5,smart_W2_domain	-	no_errors	EIF5	HGNC	ENSG00000100664	110	0	0.00	113	123	52.12	-	-	-
EMR2	0	genome.wustl.edu	37	19	14866468	14866468	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	19	14866468	14866468	G	A	SNP	EMR2	ENST00000315576	human	ensembl	69_37n	-1	known	missense	c.1414	p.R472C	0.047	NULL	pfam_GPCR_2_secretin-like,pfam_EGF-like_Ca-bd,pfam_GPS_dom,pfam_EGF-like_dom,smart_EGF-like,smart_EGF-like_Ca-bd,smart_GPS_dom,prints_GPCR_2_CD97,prints_GPCR_2_EMR1_rcpt,prints_GPCR_2_secretin-like,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	EMR2	HGNC	ENSG00000127507	221	0	0.00	178	117	39.66	-	-	-
ERVW-1	0	genome.wustl.edu	37	7	92098206	92098206	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	7	92098206	92098206	A	T	SNP	ERVW-1	ENST00000493463	human	ensembl	69_37n	-1	known	missense	c.1490	p.I497N	0.371	NULL	pfam_TLV/ENV_coat_polyprotein	-	no_errors	ERVW-1	HGNC	ENSG00000242950	15	0	0.00	7	6	46.15	-	-	-
FLII	0	genome.wustl.edu	37	17	18149307	18149307	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	17	18149307	18149307	C	T	SNP	FLII	ENST00000327031	human	ensembl	69_37n	-1	known	missense	c.3337	p.E1113K	1.000	smart_Gelsolin	pfam_Gelsolin_dom,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Gelsolin,prints_Gelsolin	-	no_errors	FLII	HGNC	ENSG00000177731	107	0	0.00	461	75	13.99	-	-	-
FRG1B	0	genome.wustl.edu	37	20	29632638	29632638	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	20	29632638	29632638	C	A	SNP	FRG1B	ENST00000278882	human	ensembl	69_37n	+1	known	missense	c.453	p.H151Q	0.999	pfam_FRG1	pfam_FRG1,superfamily_Actin_cross-linking	-	no_errors	FRG1B	HGNC	ENSG00000149531	20	0	0.00	51	17	25.00	-	-	-
GLYR1	0	genome.wustl.edu	37	16	4862120	4862122	+	In_Frame_Del	DEL	AGC	AGC	-			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	AGC	AGC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	16	4862120	4862122	AGC	-	DEL	GLYR1	ENST00000321919	human	ensembl	69_37n	-1	known	in_frame_del	c.1249_1247	p.C416in_frame_del	1.000:1.000:1.000	pfam_6PGDH_NADP-bd	pfam_6PGDH_NADP-bd,pfam_PWWP,pfam_NADP_OxRdtase_F420,superfamily_6-PGluconate_DH_C-like,smart_PWWP,pfscan_PWWP	-	no_errors	GLYR1	HGNC	ENSG00000140632	54	0	0.00	74	55	41.98	-	-	-
IGKV1-39	0	genome.wustl.edu	37	2	89619806	89619806	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	2	89619806	89619806	G	A	SNP	IGKV1-39	ENST00000498574	human	ensembl	69_37n	-1	known	nonsense	c.52	p.R18*	0.010	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGKV1-39	HGNC	ENSG00000242371	44	0	0.00	26	12	31.58	-	-	-
IRAK1	0	genome.wustl.edu	37	X	153284685	153284685	+	Silent	SNP	C	C	A			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	X	153284685	153284685	C	A	SNP	IRAK1	ENST00000369980	human	ensembl	69_37n	-1	known	silent	c.399	p.R133	0.037	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death,superfamily_Kinase-like_dom,superfamily_DEATH-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	IRAK1	HGNC	ENSG00000184216	52	0	0.00	52	20	27.78	-	-	-
MARVELD3	0	genome.wustl.edu	37	16	71660364	71660365	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	16	71660364	71660365	GA	-	DEL	MARVELD3	ENST00000299952	human	ensembl	69_37n	+1	known	frame_shift_del	c.232_233	p.R81fs	0.012:0.012	NULL	NULL	-	no_errors	MARVELD3	HGNC	ENSG00000140832	30	0	0.00	19	3	13.64	-	-	-
MLLT10	0	genome.wustl.edu	37	10	21959565	21959565	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	10	21959565	21959565	G	A	SNP	MLLT10	ENST00000307729	human	ensembl	69_37n	+1	known	missense	c.983	p.R328K	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	MLLT10	HGNC	ENSG00000078403	72	0	0.00	91	91	50.00	-	-	-
NBPF1	0	genome.wustl.edu	37	1	16909220	16909220	+	RNA	SNP	T	T	C			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	1	16909220	16909220	T	C	SNP	NBPF1	ENST00000392963	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.950	-	-	-	no_errors	NBPF1	HGNC	ENSG00000219481	9	0	0.00	3	4	57.14	-	-	-
NKTR	0	genome.wustl.edu	37	3	42659115	42659115	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	3	42659115	42659115	A	G	SNP	NKTR	ENST00000232978	human	ensembl	69_37n	+1	known	missense	c.112	p.N38D	1.000	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom	-	no_errors	NKTR	HGNC	ENSG00000114857	192	0	0.00	397	240	37.62	-	-	-
OR2T2	0	genome.wustl.edu	37	1	248616513	248616513	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	1	248616513	248616513	C	T	SNP	OR2T2	ENST00000342927	human	ensembl	69_37n	+1	known	missense	c.415	p.R139C	0.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2T2	HGNC	ENSG00000196240	210	0	0.00	350	72	17.06	-	-	-
PCDH7	0	genome.wustl.edu	37	4	30725334	30725334	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	4	30725334	30725334	G	T	SNP	PCDH7	ENST00000543491	human	ensembl	69_37n	+1	known	missense	c.2290	p.A764S	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH7	HGNC	ENSG00000169851	54	0	0.00	36	4	10.00	-	-	-
PITPNM1	0	genome.wustl.edu	37	11	67269453	67269453	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	11	67269453	67269453	C	T	SNP	PITPNM1	ENST00000356404	human	ensembl	69_37n	-1	known	missense	c.520	p.D174N	1.000	pfam_PI_transfer	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM1	HGNC	ENSG00000110697	58	0	0.00	260	41	13.58	-	-	-
PJA1	0	genome.wustl.edu	37	X	68382547	68382547	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	X	68382547	68382547	G	A	SNP	PJA1	ENST00000361478	human	ensembl	69_37n	-1	known	nonsense	c.535	p.R179*	0.001	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PJA1	HGNC	ENSG00000181191	61	0	0.00	121	44	26.51	-	-	-
PLXNA4	0	genome.wustl.edu	37	7	131908302	131908302	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	7	131908302	131908302	C	T	SNP	PLXNA4	ENST00000321063	human	ensembl	69_37n	-1	known	missense	c.2081	p.R694Q	1.000	pfam_Plexin_repeat,superfamily_Plexin-like_fold,smart_Plexin-like	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semaphorin/CD100_Ag,pfam_IPT_TIG_rcpt,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_IPT_TIG_rcpt,pfscan_Semaphorin/CD100_Ag	-	no_errors	PLXNA4	HGNC	ENSG00000221866	65	0	0.00	84	30	26.32	-	-	-
PLXND1	0	genome.wustl.edu	37	3	129289712	129289712	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	3	129289712	129289712	C	T	SNP	PLXND1	ENST00000324093	human	ensembl	69_37n	-1	known	missense	c.3667	p.D1223N	0.998	superfamily_Ig_E-set	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT_TIG_rcpt,pfam_Semaphorin/CD100_Ag,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_IPT_TIG_rcpt,pfscan_Semaphorin/CD100_Ag	-	no_errors	PLXND1	HGNC	ENSG00000004399	95	0	0.00	96	71	42.51	-	-	-
PPM1D	0	genome.wustl.edu	37	17	58740624	58740624	+	Frame_Shift_Del	DEL	A	A	-			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	17	58740624	58740624	A	-	DEL	PPM1D	ENST00000305921	human	ensembl	69_37n	+1	known	frame_shift_del	c.1529	p.N512fs	0.997	NULL	pfam_PP2C-like,superfamily_PP2C-like,smart_PP2C-like	-	no_errors	PPM1D	HGNC	ENSG00000170836	23	0	0.00	44	15	24.59	-	-	-
RASAL3	0	genome.wustl.edu	37	19	15565621	15565621	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	19	15565621	15565621	C	T	SNP	RASAL3	ENST00000343625	human	ensembl	69_37n	-1	known	missense	c.1805	p.R602Q	0.992	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,smart_RasGAP,pfscan_RasGAP	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_RasGAP,pfscan_RasGAP	-	no_errors	RASAL3	HGNC	ENSG00000105122	91	0	0.00	52	28	35.00	-	-	-
SEMA4G	0	genome.wustl.edu	37	10	102732993	102732993	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	10	102732993	102732993	T	G	SNP	SEMA4G	ENST00000210633	human	ensembl	69_37n	+1	known	missense	c.232	p.S78A	1.000	pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,smart_Semaphorin/CD100_Ag,pfscan_Semaphorin/CD100_Ag	pfam_Semaphorin/CD100_Ag,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_Ig_sub,pfscan_Semaphorin/CD100_Ag,pfscan_Ig-like	-	no_errors	SEMA4G	HGNC	ENSG00000095539	42	0	0.00	25	24	48.98	-	-	-
SPRYD4	0	genome.wustl.edu	37	12	56862936	56862936	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	12	56862936	56862936	A	C	SNP	SPRYD4	ENST00000338146	human	ensembl	69_37n	+1	known	missense	c.199	p.N67H	1.000	superfamily_ConA-like_lec_gl,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	-	no_errors	SPRYD4	HGNC	ENSG00000176422	23	0	0.00	35	18	33.96	-	-	-
STMN4	0	genome.wustl.edu	37	8	27098633	27098633	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	8	27098633	27098633	G	A	SNP	STMN4	ENST00000350889	human	ensembl	69_37n	-1	known	missense	c.337	p.R113W	1.000	pfam_Stathmin,superfamily_Stathmin,pirsf_Stathmin,prints_Stathmin	pfam_Stathmin,superfamily_Stathmin,pirsf_Stathmin,prints_Stathmin	-	no_errors	STMN4	HGNC	ENSG00000015592	127	0	0.00	212	57	21.19	-	-	-
SYT12	0	genome.wustl.edu	37	11	66811295	66811295	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	11	66811295	66811295	G	T	SNP	SYT12	ENST00000393946	human	ensembl	69_37n	+1	known	missense	c.808	p.G270C	0.998	superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	SYT12	HGNC	ENSG00000173227	71	0	0.00	352	49	12.22	-	-	-
TANC2	0	genome.wustl.edu	37	17	61498828	61498828	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	17	61498828	61498828	A	G	SNP	TANC2	ENST00000424789	human	ensembl	69_37n	+1	known	missense	c.5485	p.T1829A	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_TPR_repeat,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TANC2	HGNC	ENSG00000170921	85	0	0.00	111	78	40.84	-	-	-
TBL3	0	genome.wustl.edu	37	16	2027601	2027601	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	16	2027601	2027601	G	A	SNP	TBL3	ENST00000568546	human	ensembl	69_37n	+1	known	missense	c.1829	p.G610E	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_SSU_processome_Utp13,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TBL3	HGNC	ENSG00000183751	37	0	0.00	34	32	48.48	-	-	-
TRIP10	0	genome.wustl.edu	37	19	6750615	6750615	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	19	6750615	6750615	G	T	SNP	TRIP10	ENST00000313244	human	ensembl	69_37n	+1	known	missense	c.1628	p.G543V	1.000	superfamily_SH3_domain,smart_SH3_domain	pfam_FCH,pfam_SH3_domain,superfamily_SH3_domain,smart_FCH,smart_SH3_domain,pfscan_FCH,pfscan_SH3_domain	-	no_errors	TRIP10	HGNC	ENSG00000125733	68	0	0.00	79	36	31.30	-	-	-
ZNF705G	0	genome.wustl.edu	37	8	7217792	7217792	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	8	7217792	7217792	C	A	SNP	ZNF705G	ENST00000400078	human	ensembl	69_37n	-1	known	nonsense	c.202	p.E68*	0.514	pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF705G	HGNC	ENSG00000215372	294	0	0.00	434	216	33.23	-	-	-
