Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA13	0	genome.wustl.edu	37	7	48338055	48338055	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	7	48338055	48338055	A	T	SNP	ABCA13	ENST00000435803	human	ensembl	69_37n	+1	known	missense	c.9292	p.I3098F	0.006	NULL	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869	281	0	0.00	343	225	39.54	-	-	-
ADRA2B	0	genome.wustl.edu	37	2	96780849	96780849	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	2	96780849	96780849	C	T	SNP	ADRA2B	ENST00000409345	human	ensembl	69_37n	-1	known	missense	c.1040	p.G347D	0.001	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Adren_rcpt_A2B	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_Adren_rcpt_A2B,prints_7TM_GPCR_Rhodpsn,prints_Adrnrgc_rcpt	-	no_errors	ADRA2B	HGNC	ENSG00000222040	33	0	0.00	108	14	11.38	-	-	-
AP2M1	0	genome.wustl.edu	37	3	183896904	183896904	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	183896904	183896904	C	A	SNP	AP2M1	ENST00000292807	human	ensembl	69_37n	+1	known	missense	c.334	p.L112M	1.000	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom,pirsf_Clathrin_mu,prints_Clathrin_mu	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C,prints_Clathrin_mu	-	no_errors	AP2M1	HGNC	ENSG00000161203	113	0	0.00	58	59	50.43	-	-	-
ARAP3	0	genome.wustl.edu	37	5	141051178	141051178	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	5	141051178	141051178	T	C	SNP	ARAP3	ENST00000239440	human	ensembl	69_37n	-1	known	missense	c.1813	p.K605E	0.977	pfam_ArfGAP,superfamily_ArfGAP,smart_ArfGAP,pfscan_ArfGAP	pfam_RhoGAP_dom,pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ras-assoc,pfam_SAM_2,pfam_SAM_type1,superfamily_Rho_GTPase_activation_prot,superfamily_ArfGAP,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP3	HGNC	ENSG00000120318	28	0	0.00	20	8	28.57	-	-	-
ASL	0	genome.wustl.edu	37	7	65547366	65547366	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	7	65547366	65547366	G	C	SNP	ASL	ENST00000304874	human	ensembl	69_37n	+1	known	missense	c.219	p.E73D	1.000	pfam_Lyase1_N,superfamily_L-Aspartase-like,tigrfam_Argininosuccinate_lyase	pfam_Lyase1_N,superfamily_L-Aspartase-like,prints_D_crystallin,prints_Fumarate_lyase,tigrfam_Argininosuccinate_lyase	-	no_errors	ASL	HGNC	ENSG00000126522	64	0	0.00	104	24	18.46	-	-	-
ATP13A4	0	genome.wustl.edu	37	3	193188758	193188758	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	193188758	193188758	C	G	SNP	ATP13A4	ENST00000342695	human	ensembl	69_37n	-1	known	missense	c.833	p.R278P	0.294	pfam_ATPase_P-typ_ATPase-assoc-dom,tigrfam_ATPase_P-typ_unknown-pump-sp,tigrfam_ATPase_P-typ_ion-transptr	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_ion-transptr,prints_ATPase_P-typ_cation-exchng_asu,tigrfam_ATPase_P-typ_unknown-pump-sp,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP13A4	HGNC	ENSG00000127249	102	0	0.00	96	21	17.95	-	-	-
AZGP1	0	genome.wustl.edu	37	7	99565858	99565858	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	7	99565858	99565858	G	A	SNP	AZGP1	ENST00000292401	human	ensembl	69_37n	-1	known	missense	c.533	p.A178V	0.000	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like,prints_MHC_I_a_a1/a2	-	no_errors	AZGP1	HGNC	ENSG00000160862	173	0	0.00	175	156	46.85	-	-	-
BCORL1	0	genome.wustl.edu	37	X	129147782	129147782	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	X	129147782	129147782	C	T	SNP	BCORL1	ENST00000303743	human	ensembl	69_37n	+1	known	missense	c.1034	p.T345M	0.983	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCORL1	HGNC	ENSG00000085185	113	0	0.00	120	50	29.41	-	-	-
BMS1P4	0	genome.wustl.edu	37	10	75482195	75482195	+	RNA	SNP	C	C	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	10	75482195	75482195	C	T	SNP	BMS1P4	ENST00000399449	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	RP11-464F9.1	Clone_based_vega_gene	ENSG00000242288	105	0	0.00	104	144	57.83	-	-	-
BOD1L1	0	genome.wustl.edu	37	4	13606196	13606196	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	4	13606196	13606196	A	T	SNP	BOD1L1	ENST00000040738	human	ensembl	69_37n	-1	known	missense	c.2328	p.S776R	1.000	NULL	NULL	-	no_errors	BOD1L1	HGNC	ENSG00000038219	412	0	0.00	376	150	28.52	-	-	-
BRD9	0	genome.wustl.edu	37	5	865540	865540	+	Missense_Mutation	SNP	T	T	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	5	865540	865540	T	A	SNP	BRD9	ENST00000467963	human	ensembl	69_37n	-1	known	missense	c.1682	p.Q561L	0.993	NULL	pfam_DUF3512,pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD9	HGNC	ENSG00000028310	51	0	0.00	69	25	26.60	-	-	-
C3orf77	0	genome.wustl.edu	37	3	44283717	44283717	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	44283717	44283717	C	A	SNP	C3orf77	ENST00000309765	human	ensembl	69_37n	+1	known	missense	c.172	p.P58T	0.003	NULL	NULL	-	no_errors	C3orf77	HGNC	ENSG00000173769	22	0	0.00	16	10	38.46	-	-	-
C7orf60	0	genome.wustl.edu	37	7	112462311	112462311	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	7	112462311	112462311	C	A	SNP	C7orf60	ENST00000297145	human	ensembl	69_37n	-1	known	nonsense	c.706	p.E236*	1.000	pfam_DUF3321	pfam_DUF3321	-	no_errors	C7orf60	HGNC	ENSG00000164603	72	0	0.00	105	67	38.95	-	-	-
C9orf174	0	genome.wustl.edu	37	9	100092921	100092921	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	9	100092921	100092921	C	G	SNP	C9orf174	ENST00000375202	human	ensembl	69_37n	+1	known	missense	c.2278	p.Q760E	0.000	NULL	NULL	-	no_errors	C9orf174	HGNC	ENSG00000197816	104	0	0.00	77	38	33.04	-	-	-
CACNA1F	0	genome.wustl.edu	37	X	49076144	49076144	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	X	49076144	49076144	A	G	SNP	CACNA1F	ENST00000376265	human	ensembl	69_37n	-1	known	missense	c.2525	p.V842A	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1F	HGNC	ENSG00000102001	216	2	0.90	318	92	22.38	-	-	-
CASQ1	0	genome.wustl.edu	37	1	160167383	160167383	+	Silent	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	160167383	160167383	G	A	SNP	CASQ1	ENST00000368078	human	ensembl	69_37n	+1	known	silent	c.807	p.P269	0.231	pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Calsequestrin	pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Calsequestrin	-	no_errors	CASQ1	HGNC	ENSG00000143318	123	0	0.00	109	120	52.40	-	-	-
CASQ2	0	genome.wustl.edu	37	1	116280870	116280870	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	116280870	116280870	G	-	DEL	CASQ2	ENST00000261448	human	ensembl	69_37n	-1	known	frame_shift_del	c.507	p.F171fs	1.000	pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Calsequestrin	pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Calsequestrin	-	no_errors	CASQ2	HGNC	ENSG00000118729	206	0	0.00	246	126	32.31	-	-	-
CCNL2	0	genome.wustl.edu	37	1	1328842	1328842	+	Splice_Site	SNP	T	T	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	1328842	1328842	T	C	SNP	CCNL2	ENST00000400809	human	ensembl	69_37n	-1	known	splice_site	c.595-2	e5-2	1.000	-	-	-	no_errors	CCNL2	HGNC	ENSG00000221978	87	0	0.00	32	100	75.76	-	-	-
CD33	0	genome.wustl.edu	37	19	51728821	51728821	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	19	51728821	51728821	T	C	SNP	CD33	ENST00000262262	human	ensembl	69_37n	+1	known	missense	c.385	p.Y129H	0.004	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,pfscan_Ig-like	-	no_errors	CD33	HGNC	ENSG00000105383	38	0	0.00	52	19	26.76	-	-	-
CDH11	0	genome.wustl.edu	37	16	65025783	65025783	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	16	65025783	65025783	G	C	SNP	CDH11	ENST00000268603	human	ensembl	69_37n	-1	known	missense	c.699	p.H233Q	0.358	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH11	HGNC	ENSG00000140937	257	0	0.00	331	119	26.39	-	-	-
CHST9	0	genome.wustl.edu	37	18	24496887	24496887	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	18	24496887	24496887	C	G	SNP	CHST9	ENST00000284224	human	ensembl	69_37n	-1	known	missense	c.668	p.G223A	1.000	pfam_Sulfotransferase	pfam_Sulfotransferase	-	no_errors	CHST9	HGNC	ENSG00000154080	241	0	0.00	88	423	82.62	-	-	-
COL18A1	0	genome.wustl.edu	37	21	46897375	46897375	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	21	46897375	46897375	C	T	SNP	COL18A1	ENST00000359759	human	ensembl	69_37n	+1	known	missense	c.2224	p.R742W	0.000	NULL	pfam_Collagenase_NC10/endostatin,pfam_DUF959_COL18_N,pfam_Collagen,pfam_Frizzled_dom,superfamily_C-type_lectin_fold,superfamily_ConA-like_lec_gl,superfamily_Frizzled_dom,smart_Frizzled_dom,smart_Laminin_G,pfscan_Frizzled_dom	-	no_errors	COL18A1	HGNC	ENSG00000182871	39	0	0.00	97	21	17.65	-	-	-
CPA1	0	genome.wustl.edu	37	7	130023284	130023284	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	7	130023284	130023284	A	G	SNP	CPA1	ENST00000011292	human	ensembl	69_37n	+1	known	missense	c.536	p.H179R	1.000	pfam_Peptidase_M14,smart_Peptidase_M14,prints_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA1	HGNC	ENSG00000091704	94	0	0.00	132	90	40.54	-	-	-
CROCC	0	genome.wustl.edu	37	1	17266458	17266458	+	Nonsense_Mutation	SNP	G	G	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	17266458	17266458	G	T	SNP	CROCC	ENST00000375541	human	ensembl	69_37n	+1	known	nonsense	c.1678	p.E560*	1.000	NULL	superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CROCC	HGNC	ENSG00000058453	14	0	0.00	23	14	37.84	-	-	-
CYSLTR1	0	genome.wustl.edu	37	X	77528833	77528833	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	X	77528833	77528833	C	A	SNP	CYSLTR1	ENST00000373304	human	ensembl	69_37n	-1	known	missense	c.411	p.Q137H	0.997	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srv,prints_Cyst_leuk_rcpt,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srv,prints_Cyst_leuk_rcpt,prints_CLT1_recept,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	CYSLTR1	HGNC	ENSG00000173198	172	0	0.00	248	222	47.23	-	-	-
DENND5B	0	genome.wustl.edu	37	12	31551140	31551140	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	12	31551140	31551140	C	G	SNP	DENND5B	ENST00000306833	human	ensembl	69_37n	-1	known	missense	c.3330	p.L1110F	0.868	NULL	pfam_DENN_dom,pfam_Run,pfam_uDENN_dom,pfam_dDENN_dom,pfam_LipOase_LH2,superfamily_Lipase_LipOase,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_Run,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_LipOase_LH2,pfscan_Run	-	no_errors	DENND5B	HGNC	ENSG00000170456	159	0	0.00	289	123	29.85	-	-	-
DHX30	0	genome.wustl.edu	37	3	47889002	47889002	+	Nonsense_Mutation	SNP	G	G	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	47889002	47889002	G	T	SNP	DHX30	ENST00000445061	human	ensembl	69_37n	+1	known	nonsense	c.2086	p.E696*	0.877	smart_Helicase_C,pfscan_Helicase_C	pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DUF1605,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX30	HGNC	ENSG00000132153	43	0	0.00	31	16	34.04	-	-	-
DKK3	0	genome.wustl.edu	37	11	12023920	12023920	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	12023920	12023920	C	T	SNP	DKK3	ENST00000326932	human	ensembl	69_37n	-1	known	missense	c.278	p.S93N	0.978	NULL	pfam_Dickkopf_N	-	no_errors	DKK3	HGNC	ENSG00000050165	427	0	0.00	378	213	36.04	-	-	-
DST	0	genome.wustl.edu	37	6	56473155	56473155	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	6	56473155	56473155	A	C	SNP	DST	ENST00000370754	human	ensembl	69_37n	-1	known	missense	c.6172	p.L2058V	0.046	pfam_Plectin_repeat,superfamily_ABC_transptrTM_dom_typ1,smart_Plectin_repeat	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC_transptrTM_dom_typ1,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_Ca-bd,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_HAND_2	-	no_errors	DST	HGNC	ENSG00000151914	222	0	0.00	247	121	32.88	-	-	-
EIF3M	0	genome.wustl.edu	37	11	32608625	32608625	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	32608625	32608625	G	C	SNP	EIF3M	ENST00000531120	human	ensembl	69_37n	+1	known	missense	c.110	p.G37A	1.000	NULL	pfam_PCI_dom,superfamily_ARM-type_fold,smart_PCI_dom	-	no_errors	EIF3M	HGNC	ENSG00000149100	271	0	0.00	96	178	64.96	-	-	-
FAM190B	0	genome.wustl.edu	37	10	86198279	86198279	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	10	86198279	86198279	A	T	SNP	FAM190B	ENST00000372088	human	ensembl	69_37n	+1	known	missense	c.1880	p.Y627F	1.000	NULL	NULL	-	no_errors	FAM190B	HGNC	ENSG00000107771	212	0	0.00	236	66	21.85	-	-	-
FAM46A	0	genome.wustl.edu	37	6	82461445	82461445	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	6	82461445	82461445	C	G	SNP	FAM46A	ENST00000369756	human	ensembl	69_37n	-1	known	missense	c.657	p.K219N	1.000	pfam_DUF1693	pfam_DUF1693	-	no_errors	FAM46A	HGNC	ENSG00000112773	15	0	0.00	16	17	51.52	-	-	-
FAM65C	0	genome.wustl.edu	37	20	49208955	49208955	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	20	49208955	49208955	C	G	SNP	FAM65C	ENST00000535356	human	ensembl	69_37n	-1	known	missense	c.2503	p.G835R	0.984	superfamily_ARM-type_fold	superfamily_ARM-type_fold,superfamily_Chemokine_IL8-like_dom	-	no_errors	FAM65C	HGNC	ENSG00000042062	24	0	0.00	11	18	62.07	-	-	-
FAM92A1P2	0	genome.wustl.edu	37	4	183959891	183959891	+	RNA	SNP	A	A	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	4	183959891	183959891	A	T	SNP	FAM92A1P2	ENST00000502308	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.950	-	-	-	no_errors	FAM92A1P2	HGNC	ENSG00000230219	42	0	0.00	32	6	15.79	-	-	-
FIG4	0	genome.wustl.edu	37	6	110107520	110107520	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	6	110107520	110107520	A	T	SNP	FIG4	ENST00000230124	human	ensembl	69_37n	+1	known	missense	c.1964	p.N655I	1.000	NULL	pfam_Syja_N,pfscan_Syja_N	-	no_errors	FIG4	HGNC	ENSG00000112367	179	0	0.00	347	68	16.39	-	-	-
FOLH1	0	genome.wustl.edu	37	11	49190796	49190796	+	Silent	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	49190796	49190796	G	A	SNP	FOLH1	ENST00000256999	human	ensembl	69_37n	-1	known	silent	c.1323	p.L441	0.998	pfam_Peptidase_M28	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	278	0	0.00	281	153	35.25	-	-	-
FTSJD1	0	genome.wustl.edu	37	16	71319781	71319781	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	16	71319781	71319781	G	C	SNP	FTSJD1	ENST00000338099	human	ensembl	69_37n	-1	known	missense	c.43	p.P15A	0.001	NULL	pfam_rRNA_MeTrfase_FtsJ_dom	-	no_errors	FTSJD1	HGNC	ENSG00000180917	76	0	0.00	133	40	23.12	-	-	-
GALNT9	0	genome.wustl.edu	37	12	132862937	132862937	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	12	132862937	132862937	G	C	SNP	GALNT9	ENST00000328957	human	ensembl	69_37n	-1	known	missense	c.318	p.D106E	1.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT9	HGNC	ENSG00000182870	21	0	0.00	26	12	31.58	-	-	-
GALNTL5	0	genome.wustl.edu	37	7	151716746	151716746	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	7	151716746	151716746	C	T	SNP	GALNTL5	ENST00000392800	human	ensembl	69_37n	+1	known	nonsense	c.1192	p.R398*	0.001	NULL	pfam_Glyco_trans_2	-	no_errors	GALNTL5	HGNC	ENSG00000106648	178	0	0.00	62	136	68.34	-	-	-
GBF1	0	genome.wustl.edu	37	10	104128052	104128052	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	10	104128052	104128052	G	T	SNP	GBF1	ENST00000369983	human	ensembl	69_37n	+1	known	missense	c.2717	p.R906L	1.000	NULL	pfam_Sec7,superfamily_Sec7,superfamily_ARM-type_fold,smart_Sec7,pfscan_Sec7	-	no_errors	GBF1	HGNC	ENSG00000107862	205	0	0.00	154	83	35.02	-	-	-
GGTLC1	0	genome.wustl.edu	37	20	23966412	23966412	+	Silent	SNP	G	G	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	20	23966412	23966412	G	T	SNP	GGTLC1	ENST00000278765	human	ensembl	69_37n	-1	known	silent	c.423	p.I141	1.000	pfam_GGT_peptidase,prints_GGT_peptidase	pfam_GGT_peptidase,prints_GGT_peptidase	-	no_errors	GGTLC1	HGNC	ENSG00000149435	166	1	0.60	260	68	20.54	-	-	-
GK5	0	genome.wustl.edu	37	3	141890304	141890304	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	141890304	141890304	C	G	SNP	GK5	ENST00000392993	human	ensembl	69_37n	-1	known	missense	c.1264	p.E422Q	1.000	pfam_Carb_kinase_FGGY_C	pfam_Carb_kinase_FGGY_N,pfam_Carb_kinase_FGGY_C	-	no_errors	GK5	HGNC	ENSG00000175066	233	1	0.43	683	143	17.31	-	-	-
GPR137B	0	genome.wustl.edu	37	1	236341802	236341802	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	236341802	236341802	T	C	SNP	GPR137B	ENST00000366592	human	ensembl	69_37n	+1	known	missense	c.553	p.W185R	0.449	NULL	NULL	-	no_errors	GPR137B	HGNC	ENSG00000077585	278	0	0.00	421	194	31.54	-	-	-
GREB1L	0	genome.wustl.edu	37	18	19020262	19020262	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	18	19020262	19020262	C	T	SNP	GREB1L	ENST00000424526	human	ensembl	69_37n	+1	known	nonsense	c.982	p.R328*	1.000	NULL	NULL	-	no_errors	GREB1L	HGNC	ENSG00000141449	137	0	0.00	53	149	73.40	-	-	-
GRIA3	0	genome.wustl.edu	37	X	122538638	122538638	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	X	122538638	122538638	T	C	SNP	GRIA3	ENST00000264357	human	ensembl	69_37n	+1	known	missense	c.1373	p.L458P	1.000	pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA3	HGNC	ENSG00000125675	242	0	0.00	321	103	24.29	-	-	-
HLA-DMB	0	genome.wustl.edu	37	6	32905029	32905029	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	6	32905029	32905029	G	T	SNP	HLA-DMB	ENST00000418107	human	ensembl	69_37n	-1	known	missense	c.542	p.A181D	0.826	pfam_Ig_C1-set,pfam_CD80_C2-set,smart_Ig_C1-set,pfscan_Ig-like	pfam_Ig_C1-set,pfam_MHC_II_b_N,pfam_CD80_C2-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	HLA-DMB	HGNC	ENSG00000242574	86	0	0.00	119	42	25.93	-	-	-
HNRNPF	0	genome.wustl.edu	37	10	43883017	43883017	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	10	43883017	43883017	C	T	SNP	HNRNPF	ENST00000337970	human	ensembl	69_37n	-1	known	missense	c.316	p.D106N	0.978	NULL	pfam_RRM_dom,pfam_Znf_CHHC,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPF	HGNC	ENSG00000169813	153	1	0.65	300	79	20.84	-	-	-
HOMER2	0	genome.wustl.edu	37	15	83523466	83523466	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	15	83523466	83523466	G	T	SNP	HOMER2	ENST00000304231	human	ensembl	69_37n	-1	known	missense	c.614	p.A205E	0.164	NULL	pfam_EVH1,smart_EVH1,pfscan_EVH1	-	no_errors	HOMER2	HGNC	ENSG00000103942	37	0	0.00	24	35	59.32	-	-	-
ITGB2	0	genome.wustl.edu	37	21	46309979	46309979	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	21	46309979	46309979	A	T	SNP	ITGB2	ENST00000302347	human	ensembl	69_37n	-1	known	missense	c.1571	p.V524D	0.004	pirsf_Integrin_bsu,pfam_EGF_extracell	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_tail,pfam_Integrin_bsu_cyt,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB2	HGNC	ENSG00000160255	47	0	0.00	75	20	21.05	-	-	-
ITIH6	0	genome.wustl.edu	37	X	54780124	54780124	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	X	54780124	54780124	G	T	SNP	ITIH6	ENST00000218436	human	ensembl	69_37n	-1	known	missense	c.3312	p.H1104Q	0.001	NULL	pfam_VIT,pfam_ITI_HC_C,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH6	HGNC	ENSG00000102313	271	0	0.00	218	109	33.23	-	-	-
KCND3	0	genome.wustl.edu	37	1	112524764	112524764	+	Silent	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	112524764	112524764	G	A	SNP	KCND3	ENST00000315987	human	ensembl	69_37n	-1	known	silent	c.585	p.V195	0.991	prints_K_chnl	pfam_K_chnl_volt-dep_Kv4_C,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Shal-type,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.3,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCND3	HGNC	ENSG00000171385	27	0	0.00	26	20	43.48	-	-	-
KGFLP2	0	genome.wustl.edu	37	9	41962410	41962410	+	RNA	SNP	T	T	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	9	41962410	41962410	T	A	SNP	KGFLP2	ENST00000454645	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-204M4.2	Clone_based_vega_gene	ENSG00000204837	15	0	0.00	16	7	30.43	-	-	-
KHDC1L	0	genome.wustl.edu	37	6	73951884	73951884	+	Silent	SNP	A	A	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	6	73951884	73951884	A	G	SNP	KHDC1L	ENST00000423730	human	ensembl	69_37n	-1	known	silent	c.189	p.A63	0.007	NULL	NULL	-	no_errors	KHDC1L	HGNC	ENSG00000243501	153	0	0.00	113	156	57.99	-	-	-
KRTAP5-4	0	genome.wustl.edu	37	11	1643059	1643059	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	1643059	1643059	C	A	SNP	KRTAP5-4	ENST00000399682	human	ensembl	69_37n	-1	known	missense	c.265	p.G89W	0.633	NULL	NULL	-	no_errors	KRTAP5-4	HGNC	ENSG00000241598	103	0	0.00	130	35	21.21	-	-	-
LAT	0	genome.wustl.edu	37	16	28997485	28997485	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	16	28997485	28997485	C	A	SNP	LAT	ENST00000395461	human	ensembl	69_37n	+1	known	missense	c.301	p.P101T	0.027	prints_Linker_for_activat_Tcells_prot	prints_Linker_for_activat_Tcells_prot	-	no_errors	LAT	HGNC	ENSG00000213658	35	0	0.00	50	10	16.67	-	-	-
LCE2B	0	genome.wustl.edu	37	1	152659424	152659424	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	152659424	152659424	G	T	SNP	LCE2B	ENST00000368780	human	ensembl	69_37n	+1	known	missense	c.105	p.Q35H	0.360	NULL	NULL	-	no_errors	LCE2B	HGNC	ENSG00000159455	273	0	0.00	670	155	18.77	-	-	-
LEMD2	0	genome.wustl.edu	37	6	33752167	33752167	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	6	33752167	33752167	A	G	SNP	LEMD2	ENST00000293760	human	ensembl	69_37n	-1	known	missense	c.815	p.L272P	0.999	pfam_Inner-Nucl-membr_MAN1	pfam_Inner-Nucl-membr_MAN1,pfam_LEM,superfamily_LEM-like_dom,smart_LEM,pfscan_LEM	-	no_errors	LEMD2	HGNC	ENSG00000161904	60	0	0.00	49	26	34.67	-	-	-
MAGEB4	0	genome.wustl.edu	37	X	30260876	30260876	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	X	30260876	30260876	C	G	SNP	MAGEB4	ENST00000378982	human	ensembl	69_37n	+1	known	missense	c.624	p.I208M	0.004	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB4	HGNC	ENSG00000120289	128	0	0.00	140	43	23.50	-	-	-
MBNL2	0	genome.wustl.edu	37	13	97928584	97928584	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	13	97928584	97928584	A	C	SNP	MBNL2	ENST00000376673	human	ensembl	69_37n	+1	known	missense	c.95	p.E32A	1.000	smart_Znf_CCCH	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	MBNL2	HGNC	ENSG00000139793	156	0	0.00	210	76	26.57	-	-	-
MBOAT4	0	genome.wustl.edu	37	8	29990295	29990295	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	8	29990295	29990295	G	A	SNP	MBOAT4	ENST00000320542	human	ensembl	69_37n	-1	known	missense	c.472	p.H158Y	0.035	pfam_MBOAT_fam	pfam_MBOAT_fam	-	no_errors	MBOAT4	HGNC	ENSG00000177669	35	0	0.00	55	13	18.84	-	-	-
MPLKIP	0	genome.wustl.edu	37	7	40172716	40172716	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	7	40172716	40172716	C	G	SNP	MPLKIP	ENST00000306984	human	ensembl	69_37n	-1	known	missense	c.482	p.S161T	1.000	NULL	NULL	-	no_errors	MPLKIP	HGNC	ENSG00000168303	330	0	0.00	607	115	15.91	-	-	-
MRPL49	0	genome.wustl.edu	37	11	64889852	64889852	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	64889852	64889852	G	C	SNP	MRPL49	ENST00000279242	human	ensembl	69_37n	+1	known	missense	c.34	p.G12R	0.000	NULL	pfam_Ribosomal_L49/IMG2	-	no_errors	MRPL49	HGNC	ENSG00000149792	97	0	0.00	99	98	49.75	-	-	-
MTMR12	0	genome.wustl.edu	37	5	32233994	32233994	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	5	32233994	32233994	G	C	SNP	MTMR12	ENST00000382142	human	ensembl	69_37n	-1	known	missense	c.1559	p.T520S	1.000	NULL	pfam_Myotubularin_assoc	-	no_errors	MTMR12	HGNC	ENSG00000150712	152	0	0.00	245	85	25.76	-	-	-
MUC2	0	genome.wustl.edu	37	11	1101932	1101932	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	1101932	1101932	C	A	SNP	MUC2	ENST00000441003	human	ensembl	69_37n	+1	known	missense	c.7696	p.H2566N	0.092	smart_VWF_C,pfscan_VWF_C	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788	92	0	0.00	59	35	37.23	-	-	-
MUC20	0	genome.wustl.edu	37	3	195452951	195452951	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	195452951	195452951	G	C	SNP	MUC20	ENST00000447234	human	ensembl	69_37n	+1	known	missense	c.1477	p.D493H	0.004	NULL	NULL	-	no_errors	MUC20	HGNC	ENSG00000176945	40	0	0.00	29	5	14.71	-	-	-
MUC4	0	genome.wustl.edu	37	3	195506037	195506037	+	Silent	SNP	G	G	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	195506037	195506037	G	T	SNP	MUC4	ENST00000463781	human	ensembl	69_37n	-1	known	silent	c.12414	p.S4138	0.012	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EGF-like,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	112	0	0.00	73	22	23.16	-	-	-
MUC4	0	genome.wustl.edu	37	3	195506775	195506775	+	Silent	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	195506775	195506775	G	A	SNP	MUC4	ENST00000463781	human	ensembl	69_37n	-1	known	silent	c.11676	p.T3892	0.996	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EGF-like,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	76	0	0.00	38	6	13.33	-	-	-
MUC4	0	genome.wustl.edu	37	3	195508108	195508108	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	195508108	195508108	G	A	SNP	MUC4	ENST00000463781	human	ensembl	69_37n	-1	known	missense	c.10343	p.S3448L	0.000	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EGF-like,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	107	0	0.00	94	12	11.32	-	-	-
MUC4	0	genome.wustl.edu	37	3	195511465	195511465	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	195511465	195511465	G	A	SNP	MUC4	ENST00000463781	human	ensembl	69_37n	-1	known	missense	c.6986	p.A2329V	0.040	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EGF-like,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	107	0	0.00	142	18	11.25	-	-	-
MUC4	0	genome.wustl.edu	37	3	195512343	195512343	+	Silent	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	195512343	195512343	G	A	SNP	MUC4	ENST00000463781	human	ensembl	69_37n	-1	known	silent	c.6108	p.T2036	0.000	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EGF-like,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	70	0	0.00	79	15	15.96	-	-	-
NBPF12	0	genome.wustl.edu	37	1	146408106	146408107	+	Frame_Shift_Ins	INS	-	-	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	146408106	146408107	-	A	INS	NBPF12	ENST00000446760	human	ensembl	69_37n	+1	known	frame_shift_ins	c.927_928	p.E310fs	0.000:0.001	NULL	pfam_NBPF_dom	-	no_errors	NBPF12	HGNC	ENSG00000186275	131	0	0.00	261	247	48.62	-	-	-
NDST4	0	genome.wustl.edu	37	4	115791933	115791933	+	Silent	SNP	A	A	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	4	115791933	115791933	A	G	SNP	NDST4	ENST00000264363	human	ensembl	69_37n	-1	known	silent	c.1710	p.P570	1.000	NULL	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom	-	no_errors	NDST4	HGNC	ENSG00000138653	146	0	0.00	136	175	56.09	-	-	-
NEB	0	genome.wustl.edu	37	2	152527544	152527544	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	2	152527544	152527544	A	T	SNP	NEB	ENST00000397345	human	ensembl	69_37n	-1	known	missense	c.4499	p.L1500Q	1.000	smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom_bac,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,prints_Nebulin,pfscan_Nebulin_35r-motif,pfscan_SH3_domain	-	no_errors	NEB	HGNC	ENSG00000183091	145	0	0.00	127	64	33.51	-	-	-
NEBL	0	genome.wustl.edu	37	10	21097581	21097581	+	Silent	SNP	C	C	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	10	21097581	21097581	C	A	SNP	NEBL	ENST00000377122	human	ensembl	69_37n	-1	known	silent	c.2619	p.A873	0.749	NULL	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	NEBL	HGNC	ENSG00000078114	57	0	0.00	82	19	18.81	-	-	-
NES	0	genome.wustl.edu	37	1	156640029	156640029	+	Silent	SNP	T	T	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	156640029	156640029	T	C	SNP	NES	ENST00000368223	human	ensembl	69_37n	-1	known	silent	c.3951	p.G1317	0.971	NULL	pfam_F	-	no_errors	NES	HGNC	ENSG00000132688	31	0	0.00	56	9	13.85	-	-	-
NME7	0	genome.wustl.edu	37	1	169292459	169292459	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	169292459	169292459	T	G	SNP	NME7	ENST00000367811	human	ensembl	69_37n	-1	known	missense	c.174	p.E58D	0.999	smart_Uncharacterised_DM10,pirsf_NDK7	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase,smart_Uncharacterised_DM10,smart_Nucleoside_diP_kinase,pirsf_NDK7,prints_Nucleoside_diP_kinase	-	no_errors	NME7	HGNC	ENSG00000143156	322	1	0.31	496	178	26.37	-	-	-
NTRK3	0	genome.wustl.edu	37	15	88678619	88678619	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	15	88678619	88678619	C	G	SNP	NTRK3	ENST00000360948	human	ensembl	69_37n	-1	known	missense	c.917	p.R306P	0.210	prints_Tyr_kin_neurotrophic_rcpt_3	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_LRR-contain_N,superfamily_Kinase-like_dom,smart_LRR-contain_N,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Tyr_kinase_NGF_rcpt,prints_Tyr_kin_neurotrophic_rcpt_3,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NTRK3	HGNC	ENSG00000140538	56	0	0.00	63	24	27.59	-	-	-
OBSCN	0	genome.wustl.edu	37	1	228506947	228506947	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	228506947	228506947	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	69_37n	+1	known	missense	c.14494	p.A4832T	0.375	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	26	0	0.00	53	7	11.67	-	-	-
OBSCN	0	genome.wustl.edu	37	1	228509882	228509882	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	228509882	228509882	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	69_37n	+1	known	missense	c.15340	p.E5114K	0.003	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	35	0	0.00	87	24	21.62	-	-	-
PFKP	0	genome.wustl.edu	37	10	3178021	3178021	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	10	3178021	3178021	C	T	SNP	PFKP	ENST00000381125	human	ensembl	69_37n	+1	known	missense	c.2216	p.T739M	1.000	superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,tigrfam_6-phosphofructokinase_euk	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,prints_Phosphofructokinase,tigrfam_6-phosphofructokinase_euk	-	no_errors	PFKP	HGNC	ENSG00000067057	167	0	0.00	392	64	14.04	-	-	-
POTEM	0	genome.wustl.edu	37	14	20020113	20020113	+	Silent	SNP	C	C	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	14	20020113	20020113	C	T	SNP	POTEM	ENST00000547848	human	ensembl	69_37n	-1	known	silent	c.108	p.R36	0.101	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEM	HGNC	ENSG00000187537	17	0	0.00	41	10	19.61	-	-	-
PRKG2	0	genome.wustl.edu	37	4	82061764	82061764	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	4	82061764	82061764	T	C	SNP	PRKG2	ENST00000264399	human	ensembl	69_37n	-1	known	missense	c.1467	p.I489M	0.028	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_cGMP-dependent_protein_kinase,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_cNMP-bd_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_cGMP-dependent_protein_kinase,pfscan_cNMP-bd_dom,pfscan_Prot_kinase_cat_dom,prints_cGMP_dep_kinase,prints_cAMP/cGMP_kin	-	no_errors	PRKG2	HGNC	ENSG00000138669	228	0	0.00	359	78	17.85	-	-	-
PRUNE	0	genome.wustl.edu	37	1	151006389	151006389	+	Silent	SNP	T	T	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	151006389	151006389	T	C	SNP	PRUNE	ENST00000271620	human	ensembl	69_37n	+1	known	silent	c.1041	p.S347	0.998	pfam_DHHA2	pfam_DHHA2,pfam_Pesterase_RecJ	-	no_errors	PRUNE	HGNC	ENSG00000143363	79	0	0.00	101	153	59.77	-	-	-
PSMB11	0	genome.wustl.edu	37	14	23511785	23511785	+	Silent	SNP	G	G	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	14	23511785	23511785	G	T	SNP	PSMB11	ENST00000408907	human	ensembl	69_37n	+1	known	silent	c.351	p.L117	0.642	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b,prints_Pept_T1A_subB	-	no_errors	PSMB11	HGNC	ENSG00000222028	41	0	0.00	124	43	25.60	-	-	-
RASGRP2	0	genome.wustl.edu	37	11	64503109	64503109	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	64503109	64503109	G	A	SNP	RASGRP2	ENST00000377494	human	ensembl	69_37n	-1	known	missense	c.1201	p.P401S	0.804	superfamily_Ras_GEF_dom	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_EF_hand_Ca-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_EF_HAND_2,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRP2	HGNC	ENSG00000068831	73	0	0.00	69	29	29.59	-	-	-
RBM14	0	genome.wustl.edu	37	11	66391939	66391939	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	66391939	66391939	T	C	SNP	RBM14	ENST00000310137	human	ensembl	69_37n	+1	known	missense	c.592	p.F198L	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM14	HGNC	ENSG00000239306	44	0	0.00	41	10	19.61	-	-	-
RNU6-46	0	genome.wustl.edu	37	11	67663113	67663113	+	RNA	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	67663113	67663113	G	A	SNP	RNU6-46	ENST00000383860	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RNU6-46	HGNC	ENSG00000206587	150	0	0.00	105	15	12.40	-	-	-
SDK2	0	genome.wustl.edu	37	17	71426721	71426721	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	17	71426721	71426721	A	T	SNP	SDK2	ENST00000392650	human	ensembl	69_37n	-1	known	missense	c.1512	p.D504E	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	SDK2	HGNC	ENSG00000069188	85	0	0.00	57	65	53.28	-	-	-
SEC16B	0	genome.wustl.edu	37	1	177917055	177917055	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	177917055	177917055	C	G	SNP	SEC16B	ENST00000308284	human	ensembl	69_37n	-1	known	missense	c.1568	p.G523A	1.000	NULL	NULL	-	no_errors	SEC16B	Clone_based_vega_gene	ENSG00000120341	91	0	0.00	76	21	20.19	-	-	-
SGPP1	0	genome.wustl.edu	37	14	64153112	64153112	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	14	64153112	64153112	G	C	SNP	SGPP1	ENST00000247225	human	ensembl	69_37n	-1	known	missense	c.1037	p.S346C	0.665	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	SGPP1	HGNC	ENSG00000126821	146	0	0.00	43	110	71.90	-	-	-
SIGLEC9	0	genome.wustl.edu	37	19	51631731	51631731	+	Silent	SNP	A	A	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	19	51631731	51631731	A	T	SNP	SIGLEC9	ENST00000440804	human	ensembl	69_37n	+1	known	silent	c.1167	p.I389	0.001	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like	-	no_errors	SIGLEC9	HGNC	ENSG00000129450	187	1	0.53	112	138	55.20	-	-	-
SLC6A1	0	genome.wustl.edu	37	3	11070440	11070440	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	11070440	11070440	G	-	DEL	SLC6A1	ENST00000287766	human	ensembl	69_37n	+1	known	frame_shift_del	c.1098	p.A367fs	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_GABA_GAT1	-	no_errors	SLC6A1	HGNC	ENSG00000157103	66	0	0.00	94	79	45.40	-	-	-
SLCO5A1	0	genome.wustl.edu	37	8	70588856	70588856	+	Silent	SNP	A	A	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	8	70588856	70588856	A	G	SNP	SLCO5A1	ENST00000260126	human	ensembl	69_37n	-1	known	silent	c.2077	p.L693	0.573	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal-type_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO5A1	HGNC	ENSG00000137571	131	0	0.00	211	39	15.60	-	-	-
SNAP23	0	genome.wustl.edu	37	15	42805156	42805156	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	15	42805156	42805156	C	G	SNP	SNAP23	ENST00000249647	human	ensembl	69_37n	+1	known	missense	c.61	p.L21V	1.000	smart_T_SNARE_dom,pfscan_T_SNARE_dom	pfam_T_SNARE_dom,pfam_SNAP-25,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	SNAP23	HGNC	ENSG00000092531	90	0	0.00	32	83	72.17	-	-	-
SOGA1	0	genome.wustl.edu	37	20	35406195	35406195	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	20	35406195	35406195	C	A	SNP	SOGA1	ENST00000279034	human	ensembl	69_37n	-1	known	missense	c.3033	p.Q1011H	0.002	NULL	pfam_DUF3166	-	no_errors	SOGA1	HGNC	ENSG00000149639	51	0	0.00	74	50	39.37	-	-	-
SRCAP	0	genome.wustl.edu	37	16	30733960	30733960	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	16	30733960	30733960	G	C	SNP	SRCAP	ENST00000262518	human	ensembl	69_37n	+1	known	missense	c.3783	p.Q1261H	1.000	NULL	pfam_SNF2_N,pfam_HSA,pfam_Helicase_C,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,smart_AT_hook_DNA-bd_motif,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_AT_hook-like	-	no_errors	SRCAP	HGNC	ENSG00000080603	52	0	0.00	67	16	19.28	-	-	-
STAT5A	0	genome.wustl.edu	37	17	40460235	40460235	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	17	40460235	40460235	G	A	SNP	STAT5A	ENST00000345506	human	ensembl	69_37n	+1	known	missense	c.1946	p.R649Q	0.776	pfam_SH2,smart_SH2,pfscan_SH2	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT5A	HGNC	ENSG00000126561	127	0	0.00	94	17	15.18	-	-	-
SUGT1	0	genome.wustl.edu	37	13	53241054	53241054	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	13	53241054	53241054	G	C	SNP	SUGT1	ENST00000343788	human	ensembl	69_37n	+1	known	missense	c.723	p.K241N	1.000	pfam_CS_domain,superfamily_HSP20-like_chaperone,pfscan_CS-like_domain	pfam_SGS,pfam_CS_domain,superfamily_HSP20-like_chaperone,smart_TPR_repeat,pfscan_CS-like_domain,pfscan_SGS,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	SUGT1	HGNC	ENSG00000165416	173	0	0.00	354	79	18.24	-	-	-
SYMPK	0	genome.wustl.edu	37	19	46321248	46321248	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	19	46321248	46321248	A	T	SNP	SYMPK	ENST00000245934	human	ensembl	69_37n	-1	known	missense	c.3050	p.M1017K	1.000	pfam_Symplekin_C	pfam_DUF3453,pfam_Symplekin_C,superfamily_ARM-type_fold	-	no_errors	SYMPK	HGNC	ENSG00000125755	52	0	0.00	37	14	27.45	-	-	-
TBP	0	genome.wustl.edu	37	6	170871052	170871052	+	Silent	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	6	170871052	170871052	G	A	SNP	TBP	ENST00000230354	human	ensembl	69_37n	+1	known	silent	c.228	p.Q76	0.994	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC	ENSG00000112592	26	0	0.00	53	11	17.19	-	-	-
TDRD1	0	genome.wustl.edu	37	10	115986919	115986919	+	Silent	SNP	G	G	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	10	115986919	115986919	G	C	SNP	TDRD1	ENST00000251864	human	ensembl	69_37n	+1	known	silent	c.3264	p.V1088	1.000	NULL	pfam_Tudor,pfam_Znf_MYND,smart_Tudor,pfscan_Tudor,pfscan_Znf_MYND	-	no_errors	TDRD1	HGNC	ENSG00000095627	91	0	0.00	76	39	33.91	-	-	-
TEX11	0	genome.wustl.edu	37	X	70073144	70073144	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	X	70073144	70073144	G	A	SNP	TEX11	ENST00000344304	human	ensembl	69_37n	-1	known	missense	c.404	p.A135V	0.311	NULL	pfam_Meiosis_specific_SPO22,smart_TPR_repeat	-	no_errors	TEX11	HGNC	ENSG00000120498	207	0	0.00	214	65	23.30	-	-	-
TMEM108	0	genome.wustl.edu	37	3	133109180	133109180	+	Splice_Site	SNP	T	T	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	133109180	133109180	T	A	SNP	TMEM108	ENST00000321871	human	ensembl	69_37n	+1	known	splice_site	c.1605+2	e3+2	1.000	-	-	-	no_errors	TMEM108	HGNC	ENSG00000144868	94	0	0.00	161	69	30.00	-	-	-
TP53	0	genome.wustl.edu	37	17	7578265	7578265	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	17	7578265	7578265	A	G	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.584	p.I195T	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	190	0	0.00	80	180	69.23	-	-	-
TP53BP1	0	genome.wustl.edu	37	15	43767790	43767790	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	15	43767790	43767790	C	T	SNP	TP53BP1	ENST00000382044	human	ensembl	69_37n	-1	known	missense	c.1058	p.R353K	0.903	NULL	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC	ENSG00000067369	88	0	0.00	23	83	78.30	-	-	-
UPB1	0	genome.wustl.edu	37	22	24909455	24909455	+	Splice_Site	SNP	T	T	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	22	24909455	24909455	T	A	SNP	UPB1	ENST00000326010	human	ensembl	69_37n	+1	known	splice_site	c.621+2	e5+2	1.000	-	-	-	no_errors	UPB1	HGNC	ENSG00000100024	61	0	0.00	32	28	46.67	-	-	-
USP34	0	genome.wustl.edu	37	2	61505421	61505421	+	Splice_Site	SNP	C	C	A			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	2	61505421	61505421	C	A	SNP	USP34	ENST00000398571	human	ensembl	69_37n	-1	known	splice_site	c.5313-1	e41-1	1.000	-	-	-	no_errors	USP34	HGNC	ENSG00000115464	223	0	0.00	310	326	51.26	-	-	-
UTP20	0	genome.wustl.edu	37	12	101723085	101723085	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	12	101723085	101723085	G	T	SNP	UTP20	ENST00000261637	human	ensembl	69_37n	+1	known	missense	c.3275	p.G1092V	1.000	superfamily_ARM-type_fold	pfam_DRIM,superfamily_ARM-type_fold	-	no_errors	UTP20	HGNC	ENSG00000120800	145	0	0.00	234	33	12.36	-	-	-
VSX1	0	genome.wustl.edu	37	20	25060118	25060118	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	20	25060118	25060118	G	C	SNP	VSX1	ENST00000376709	human	ensembl	69_37n	-1	known	missense	c.457	p.L153V	0.761	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	VSX1	HGNC	ENSG00000100987	89	0	0.00	160	33	17.10	-	-	-
VWA3A	0	genome.wustl.edu	37	16	22161158	22161158	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	16	22161158	22161158	T	G	SNP	VWA3A	ENST00000389398	human	ensembl	69_37n	+1	known	missense	c.3035	p.L1012R	0.998	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA3A	HGNC	ENSG00000175267	43	0	0.00	49	33	39.29	-	-	-
ZNF642	0	genome.wustl.edu	37	1	40945155	40945155	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	40945155	40945155	G	C	SNP	ZNF642	ENST00000372705	human	ensembl	69_37n	+1	known	missense	c.122	p.G41A	1.000	superfamily_Retrov_capsid_C	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,superfamily_Retrov_capsid_C,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF642	HGNC	ENSG00000187815	137	0	0.00	223	42	15.79	-	-	-
ZNF665	0	genome.wustl.edu	37	19	53668116	53668116	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	19	53668116	53668116	T	G	SNP	ZNF665	ENST00000396424	human	ensembl	69_37n	-1	known	missense	c.1627	p.K543Q	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF665	HGNC	ENSG00000197497	217	2	0.91	298	91	23.33	-	-	-
