Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AMPH	0	genome.wustl.edu	37	7	38431426	38431426	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	7	38431426	38431426	G	T	SNP	AMPH	ENST00000356264	human	ensembl	69_37n	-1	known	missense	c.1801	p.P601T	0.000	NULL	pfam_BAR_dom,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,prints_Amphiphysin,prints_Amphiphysin_1,prints_SH3_domain	-	no_errors	AMPH	HGNC	ENSG00000078053	76	0	0.00	42	18	30.00	-	-	-
CRAT	0	genome.wustl.edu	37	9	131860626	131860626	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	9	131860626	131860626	G	A	SNP	CRAT	ENST00000455396	human	ensembl	69_37n	-1	novel	missense	c.25	p.R9C	0.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CRAT	HGNC	ENSG00000095321	139	0	0.00	117	13	10.00	-	-	-
CREB1	0	genome.wustl.edu	37	2	208442363	208442363	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	2	208442363	208442363	C	T	SNP	CREB1	ENST00000432329	human	ensembl	69_37n	+1	known	missense	c.865	p.R289C	1.000	pfam_bZIP_1,pfam_bZIP_2,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_CREB	pfam_Coactivator_CBP_pKID,pfam_bZIP_1,pfam_bZIP_2,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_Coactivator_CBP_pKID,pfscan_bZIP,prints_Leuzip_CREB	-	no_errors	CREB1	HGNC	ENSG00000118260	307	0	0.00	182	98	35.00	-	-	-
DDX23	0	genome.wustl.edu	37	12	49228171	49228171	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	12	49228171	49228171	G	A	SNP	DDX23	ENST00000308025	human	ensembl	69_37n	-1	known	missense	c.1492	p.R498C	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX23	HGNC	ENSG00000174243	371	0	0.00	275	130	32.10	-	-	-
DYSF	0	genome.wustl.edu	37	2	71894557	71894557	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	2	71894557	71894557	C	T	SNP	DYSF	ENST00000413539	human	ensembl	69_37n	+1	known	missense	c.5345	p.A1782V	1.000	NULL	pfam_C2_Ca-dep,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_MFS_dom_general_subst_transpt,smart_C2_Ca-dep,smart_Peroxin/Ferlin,pfscan_C2_membr_targeting	-	no_errors	DYSF	HGNC	ENSG00000135636	34	0	0.00	44	5	10.20	-	-	-
FBXO31	0	genome.wustl.edu	37	16	87367507	87367507	+	Frame_Shift_Del	DEL	C	C	-			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	16	87367507	87367507	C	-	DEL	FBXO31	ENST00000311635	human	ensembl	69_37n	-1	known	frame_shift_del	c.1382	p.R461fs	1.000	NULL	pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like	-	no_errors	FBXO31	HGNC	ENSG00000103264	30	0	0.00	15	5	22.73	-	-	-
GAL3ST3	0	genome.wustl.edu	37	11	65810935	65810935	+	Silent	SNP	C	C	T			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	11	65810935	65810935	C	T	SNP	GAL3ST3	ENST00000312006	human	ensembl	69_37n	-1	known	silent	c.339	p.A113	0.993	pfam_Gal-3-0_sulfotransfrase	pfam_Gal-3-0_sulfotransfrase	-	no_errors	GAL3ST3	HGNC	ENSG00000175229	23	0	0.00	15	7	31.82	-	-	-
GPR174	0	genome.wustl.edu	37	X	78426998	78426998	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	X	78426998	78426998	G	T	SNP	GPR174	ENST00000276077	human	ensembl	69_37n	+1	known	missense	c.494	p.R165M	0.010	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor	-	no_errors	GPR174	HGNC	ENSG00000147138	439	1	0.23	290	152	34.31	-	-	-
HCFC1	0	genome.wustl.edu	37	X	153222202	153222202	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	X	153222202	153222202	C	A	SNP	HCFC1	ENST00000310441	human	ensembl	69_37n	-1	known	missense	c.2509	p.G837W	1.000	NULL	pfam_Kelch_2,pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	HCFC1	HGNC	ENSG00000172534	88	0	0.00	49	17	25.37	-	-	-
KLF15	0	genome.wustl.edu	37	3	126062602	126062602	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	3	126062602	126062602	G	A	SNP	KLF15	ENST00000296233	human	ensembl	69_37n	-1	known	missense	c.1219	p.R407W	0.964	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF15	HGNC	ENSG00000163884	47	0	0.00	27	15	35.71	-	-	-
MAP3K1	0	genome.wustl.edu	37	5	56161239	56161240	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	5	56161239	56161240	-	CT	INS	MAP3K1	ENST00000399503	human	ensembl	69_37n	+1	novel	frame_shift_ins	c.1108_1109	p.S371fs	1.000:1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	178	0	0.00	146	70	32.41	-	-	-
MBD3	0	genome.wustl.edu	37	19	1585064	1585064	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	19	1585064	1585064	T	C	SNP	MBD3	ENST00000156825	human	ensembl	69_37n	-1	known	missense	c.260	p.N87S	0.023	superfamily_DNA-bd_integrase-typ	pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_integrase-typ,superfamily_ARM-type_fold,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD3	HGNC	ENSG00000071655	136	0	0.00	88	37	29.60	-	-	-
MEGF11	0	genome.wustl.edu	37	15	66257398	66257398	+	Silent	SNP	G	G	A			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	15	66257398	66257398	G	A	SNP	MEGF11	ENST00000409699	human	ensembl	69_37n	-1	known	silent	c.960	p.C320	1.000	pfam_EGF_laminin,pfam_EGF_extracell,smart_EGF-like,smart_EGF_laminin,pfscan_EG-like_dom	pfam_EGF_laminin,pfam_EGF_extracell,smart_EGF-like,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_EMI_domain	-	no_errors	MEGF11	HGNC	ENSG00000157890	56	0	0.00	35	20	36.36	-	-	-
MMRN1	0	genome.wustl.edu	37	4	90833166	90833166	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	4	90833166	90833166	G	T	SNP	MMRN1	ENST00000264790	human	ensembl	69_37n	+1	known	missense	c.815	p.C272F	1.000	pfam_EMI_domain,pfscan_EMI_domain	pfam_C1q,pfam_EMI_domain,pfam_EGF-like_dom,superfamily_Tumour_necrosis_fac-like,smart_EGF-like,smart_EGF-like_Ca-bd,smart_C1q,pfscan_C1q,pfscan_EG-like_dom,pfscan_EMI_domain,prints_C1q	-	no_errors	MMRN1	HGNC	ENSG00000138722	289	0	0.00	163	81	33.06	-	-	-
MTO1	0	genome.wustl.edu	37	6	74190485	74190485	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	6	74190485	74190485	G	A	SNP	MTO1	ENST00000415954	human	ensembl	69_37n	+1	known	missense	c.1217	p.G406E	1.000	pfam_GIDA-rel,tigrfam_GidA	pfam_GIDA-rel,pfam_FAD_bind_dom,prints_FAD_pyr_nucl-diS_OxRdtase,tigrfam_GidA	-	no_errors	MTO1	HGNC	ENSG00000135297	389	0	0.00	349	63	15.29	-	-	-
OR5P2	0	genome.wustl.edu	37	11	7817592	7817592	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	11	7817592	7817592	C	T	SNP	OR5P2	ENST00000329434	human	ensembl	69_37n	-1	known	missense	c.898	p.E300K	0.001	NULL	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5P2	HGNC	ENSG00000183303	262	0	0.00	189	72	27.59	-	-	-
PCDHB10	0	genome.wustl.edu	37	5	140573470	140573470	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	5	140573470	140573470	C	T	SNP	PCDHB10	ENST00000239446	human	ensembl	69_37n	+1	known	missense	c.1345	p.P449S	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB10	HGNC	ENSG00000120324	142	0	0.00	118	37	23.87	-	-	-
PGBD2	0	genome.wustl.edu	37	1	249210807	249210807	+	Silent	SNP	C	C	G			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	1	249210807	249210807	C	G	SNP	PGBD2	ENST00000329291	human	ensembl	69_37n	+1	known	silent	c.24	p.V8	0.000	NULL	NULL	-	no_errors	PGBD2	HGNC	ENSG00000185220	189	0	0.00	123	76	38.19	-	-	-
PHKA2	0	genome.wustl.edu	37	X	18944633	18944633	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	X	18944633	18944633	G	A	SNP	PHKA2	ENST00000379942	human	ensembl	69_37n	-1	known	missense	c.1397	p.A466V	0.997	pfam_Glyco_hydro_15	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKA2	HGNC	ENSG00000044446	365	0	0.00	183	127	40.84	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	233	0	0.00	164	120	42.25	-	-	-
PLIN1	0	genome.wustl.edu	37	15	90213364	90213364	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	15	90213364	90213364	C	T	SNP	PLIN1	ENST00000300055	human	ensembl	69_37n	-1	known	missense	c.445	p.G149R	0.789	pfam_Perilipin,pirsf_Perilipin	pfam_Perilipin,pirsf_Perilipin	-	no_errors	PLIN1	HGNC	ENSG00000166819	85	0	0.00	59	25	29.76	-	-	-
POM121L12	0	genome.wustl.edu	37	7	53103484	53103484	+	Silent	SNP	C	C	G			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	7	53103484	53103484	C	G	SNP	POM121L12	ENST00000408890	human	ensembl	69_37n	+1	known	silent	c.120	p.P40	0.000	NULL	NULL	-	no_errors	POM121L12	HGNC	ENSG00000221900	19	0	0.00	10	8	44.44	-	-	-
PTPRD	0	genome.wustl.edu	37	9	8341168	8341168	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	9	8341168	8341168	G	A	SNP	PTPRD	ENST00000356435	human	ensembl	69_37n	-1	known	missense	c.5048	p.S1683F	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707	451	0	0.00	294	104	26.13	-	-	-
RPS6KB2	0	genome.wustl.edu	37	11	67200919	67200919	+	Splice_Site	SNP	G	G	T			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	11	67200919	67200919	G	T	SNP	RPS6KB2	ENST00000312629	human	ensembl	69_37n	+1	known	splice_site	c.906+1	e10+1	1.000	-	-	-	no_errors	RPS6KB2	HGNC	ENSG00000175634	83	0	0.00	58	32	35.56	-	-	-
SLC22A20	0	genome.wustl.edu	37	11	64981401	64981401	+	RNA	SNP	C	C	T			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	11	64981401	64981401	C	T	SNP	SLC22A20	ENST00000525264	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.946	-	-	-	no_errors	SLC22A20	HGNC	ENSG00000197847	28	0	0.00	24	16	40.00	-	-	-
SMARCA4	0	genome.wustl.edu	37	19	11129678	11129678	+	Silent	SNP	C	C	G			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	19	11129678	11129678	C	G	SNP	SMARCA4	ENST00000358026	human	ensembl	69_37n	+1	known	silent	c.2484	p.S828	0.243	pfam_SNF2_N,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_HSA,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616	315	0	0.00	229	115	33.43	-	-	-
TTC21B	0	genome.wustl.edu	37	2	166788288	166788289	+	Frame_Shift_Ins	INS	-	-	A			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	2	166788288	166788289	-	A	INS	TTC21B	ENST00000243344	human	ensembl	69_37n	-1	known	frame_shift_ins	c.874_873	p.T291fs	1.000:0.998	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC21B	HGNC	ENSG00000123607	620	0	0.00	374	196	34.39	-	-	-
ZC3H4	0	genome.wustl.edu	37	19	47570929	47570929	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	19	47570929	47570929	G	A	SNP	ZC3H4	ENST00000253048	human	ensembl	69_37n	-1	known	missense	c.2596	p.R866W	0.999	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H4	HGNC	ENSG00000130749	8	0	0.00	14	5	26.32	-	-	-
ZNRF3	0	genome.wustl.edu	37	22	29445672	29445672	+	Silent	SNP	G	G	A			TCGA-E2-A15C-01A-31D-A12B-09	TCGA-E2-A15C-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	10c594a1-0843-4740-9d96-00211a9509fb	3ec15582-48e3-4bb5-bdfe-7c909a259130	22	29445672	29445672	G	A	SNP	ZNRF3	ENST00000544604	human	ensembl	69_37n	+1	known	silent	c.1503	p.P501	0.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	ZNRF3	HGNC	ENSG00000183579	35	0	0.00	4	9	69.23	-	-	-
