Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
C9orf43	0	genome.wustl.edu	37	9	116187646	116187648	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	9	116187646	116187648	GCA	-	DEL	C9orf43	ENST00000288462	human	ensembl	69_37n	+1	known	in_frame_del	c.888_890	p.Q300in_frame_del	0.211:0.207:0.211	NULL	NULL	-	no_errors	C9orf43	HGNC	ENSG00000157653	33	0	0.00	30	4	11.76	-	-	-
C9orf78	0	genome.wustl.edu	37	9	132590352	132590352	+	RNA	SNP	A	A	G			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	9	132590352	132590352	A	G	SNP	C9orf78	ENST00000461349	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C9orf78	HGNC	ENSG00000136819	10	0	0.00	6	12	66.67	-	-	-
C9orf78	0	genome.wustl.edu	37	9	132590353	132590353	+	RNA	SNP	G	G	T			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	9	132590353	132590353	G	T	SNP	C9orf78	ENST00000461349	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	C9orf78	HGNC	ENSG00000136819	10	0	0.00	6	12	66.67	-	-	-
CCNY	0	genome.wustl.edu	37	10	35842095	35842095	+	Missense_Mutation	SNP	A	A	C			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	10	35842095	35842095	A	C	SNP	CCNY	ENST00000374704	human	ensembl	69_37n	+1	known	missense	c.728	p.D243A	1.000	pfam_Cyclin_N,pfam_Cyclin_PHO80-like,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_Y	pfam_Cyclin_N,pfam_Cyclin_PHO80-like,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_Y	-	no_errors	CCNY	HGNC	ENSG00000108100	65	0	0.00	39	9	18.75	-	-	-
CDH1	0	genome.wustl.edu	37	16	68849631	68849631	+	Nonsense_Mutation	SNP	G	G	T			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	16	68849631	68849631	G	T	SNP	CDH1	ENST00000261769	human	ensembl	69_37n	+1	known	nonsense	c.1534	p.E512*	0.998	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH1	HGNC	ENSG00000039068	92	0	0.00	51	7	12.07	-	-	-
CRAT	0	genome.wustl.edu	37	9	131871216	131871216	+	RNA	SNP	G	G	A			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	9	131871216	131871216	G	A	SNP	CRAT	ENST00000460708	human	ensembl	69_37n	-1	putative	rna	NULL	NULL	0.008	-	-	-	no_errors	CRAT	HGNC	ENSG00000095321	56	0	0.00	61	7	10.29	-	-	-
FMN1	0	genome.wustl.edu	37	15	33445437	33445437	+	Missense_Mutation	SNP	C	C	G			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	15	33445437	33445437	C	G	SNP	FMN1	ENST00000320930	human	ensembl	69_37n	-1	known	missense	c.1679	p.R560P	0.001	NULL	NULL	-	no_errors	FMN1	HGNC	ENSG00000248905	61	0	0.00	31	11	26.19	-	-	-
GAP43	0	genome.wustl.edu	37	3	115395232	115395232	+	Missense_Mutation	SNP	G	G	A			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	3	115395232	115395232	G	A	SNP	GAP43	ENST00000305124	human	ensembl	69_37n	+1	known	missense	c.403	p.A135T	1.000	pfam_Neuromodulin_C	pfam_Neuromodulin_C,pfam_Neuromodulin_gap-junction_N,pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,prints_Neuromodulin,pfscan_IQ_motif_EF-hand-BS	-	no_errors	GAP43	HGNC	ENSG00000172020	62	0	0.00	55	15	21.13	-	-	-
GIMAP8	0	genome.wustl.edu	37	7	150174788	150174788	+	Missense_Mutation	SNP	G	G	A			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	7	150174788	150174788	G	A	SNP	GIMAP8	ENST00000307271	human	ensembl	69_37n	+1	known	missense	c.1918	p.V640I	0.000	pfam_AIG1	pfam_AIG1	-	no_errors	GIMAP8	HGNC	ENSG00000171115	52	0	0.00	13	3	18.75	-	-	-
LINGO2	0	genome.wustl.edu	37	9	27950323	27950323	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	9	27950323	27950323	C	T	SNP	LINGO2	ENST00000308675	human	ensembl	69_37n	-1	known	missense	c.347	p.R116H	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Ig_V-set,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LINGO2	HGNC	ENSG00000174482	39	0	0.00	26	6	18.75	-	-	-
MUC5B	0	genome.wustl.edu	37	11	1268037	1268037	+	Silent	SNP	G	G	A			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	11	1268037	1268037	G	A	SNP	MUC5B	ENST00000447027	human	ensembl	69_37n	+1	known	silent	c.9936	p.P3312	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	36	0	0.00	34	5	12.82	-	-	-
NLRP7	0	genome.wustl.edu	37	19	55451644	55451644	+	Silent	SNP	G	G	A			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	19	55451644	55451644	G	A	SNP	NLRP7	ENST00000446217	human	ensembl	69_37n	-1	known	silent	c.627	p.G209	0.153	pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP7	HGNC	ENSG00000167634	105	0	0.00	63	21	25.00	-	-	-
OR51B5	0	genome.wustl.edu	37	11	5364309	5364309	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	11	5364309	5364309	C	T	SNP	OR51B5	ENST00000300773	human	ensembl	69_37n	-1	known	missense	c.446	p.R149K	0.028	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR51B5	HGNC	ENSG00000242180	25	0	0.00	12	3	20.00	-	-	-
PRKDC	0	genome.wustl.edu	37	8	48701485	48701485	+	Frame_Shift_Del	DEL	A	A	-			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	8	48701485	48701485	A	-	DEL	PRKDC	ENST00000314191	human	ensembl	69_37n	-1	known	frame_shift_del	c.10881	p.F3627fs	0.183	NULL	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	54	0	0.00	17	2	10.53	-	-	-
RUNX1	0	genome.wustl.edu	37	21	36252998	36252998	+	Missense_Mutation	SNP	C	C	G			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	21	36252998	36252998	C	G	SNP	RUNX1	ENST00000300305	human	ensembl	69_37n	-1	known	missense	c.364	p.G122R	1.000	pfam_AML1/Runt_N,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_AML1/Runt_N,prints_AML1_Runt	pfam_AML1/Runt_N,pfam_RunxI,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_AML1/Runt_N,prints_AML1_Runt	-	no_errors	RUNX1	HGNC	ENSG00000159216	50	0	0.00	34	6	15.00	-	-	-
TCN2	0	genome.wustl.edu	37	22	31008889	31008889	+	Missense_Mutation	SNP	G	G	A			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	22	31008889	31008889	G	A	SNP	TCN2	ENST00000215838	human	ensembl	69_37n	+1	known	missense	c.287	p.C96Y	0.003	pfam_Cbl-bd_transpt_euk,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_Cbl-bd_transpt_euk,superfamily_Terpenoid_cyclase/PrenylTrfase	-	no_errors	TCN2	HGNC	ENSG00000185339	30	0	0.00	30	5	14.29	-	-	-
ZNF507	0	genome.wustl.edu	37	19	32838287	32838287	+	RNA	SNP	A	A	C			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	19	32838287	32838287	A	C	SNP	ZNF507	ENST00000588686	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF507	HGNC	ENSG00000168813	10	0	0.00	1	8	88.89	-	-	-
ZNF81	0	genome.wustl.edu	37	X	47775907	47775907	+	Missense_Mutation	SNP	A	A	T			TCGA-OL-A5RV-01A-12D-A28B-09	TCGA-OL-A5RV-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c44645c5-d31b-43ae-9786-7fc7742d0619	c9a00734-ddab-4cdc-9fa2-614e08118842	X	47775907	47775907	A	T	SNP	ZNF81	ENST00000338637	human	ensembl	69_37n	+1	known	missense	c.1862	p.D621V	0.011	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF81	HGNC	ENSG00000197779	75	0	0.00	28	16	36.36	-	-	-
