Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACTL7A	0	genome.wustl.edu	37	9	111625797	111625797	+	Missense_Mutation	SNP	G	G	A			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	9	111625797	111625797	G	A	SNP	ACTL7A	ENST00000333999	human	ensembl	69_37n	+1	known	missense	c.1195	p.V399M	0.998	pfam_Actin-like,smart_Actin-like	pfam_Actin-like,smart_Actin-like,prints_Actin-like	-	no_errors	ACTL7A	HGNC	ENSG00000187003	39	0	0.00	30	5	14.29	-	-	-
ACTR5	0	genome.wustl.edu	37	20	37377139	37377139	+	Silent	SNP	C	C	T			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	20	37377139	37377139	C	T	SNP	ACTR5	ENST00000243903	human	ensembl	69_37n	+1	known	silent	c.18	p.F6	0.273	NULL	pfam_Actin-like,smart_Actin-like	-	no_errors	ACTR5	HGNC	ENSG00000101442	11	0	0.00	4	4	50.00	-	-	-
ANKHD1	0	genome.wustl.edu	37	5	139908991	139908991	+	Nonsense_Mutation	SNP	C	C	T			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	5	139908991	139908991	C	T	SNP	ANKHD1	ENST00000297183	human	ensembl	69_37n	+1	known	nonsense	c.6460	p.Q2154*	1.000	NULL	pfam_Ankyrin_rpt,pfam_KH_dom_type_1,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_KH_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_KH_dom_type_1,prints_Ankyrin_rpt	-	no_errors	ANKHD1	HGNC	ENSG00000131503	38	0	0.00	38	9	19.15	-	-	-
BOD1L1	0	genome.wustl.edu	37	4	13617077	13617077	+	Missense_Mutation	SNP	C	C	A			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	4	13617077	13617077	C	A	SNP	BOD1L1	ENST00000040738	human	ensembl	69_37n	-1	known	missense	c.418	p.D140Y	1.000	NULL	NULL	-	no_errors	BOD1L1	HGNC	ENSG00000038219	87	0	0.00	87	25	22.32	-	-	-
CACNA1E	0	genome.wustl.edu	37	1	181767845	181767845	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	1	181767845	181767845	C	T	SNP	CACNA1E	ENST00000367573	human	ensembl	69_37n	+1	known	missense	c.6817	p.R2273W	0.998	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_HAND_2,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216	49	0	0.00	50	12	19.35	-	-	-
CD8B	0	genome.wustl.edu	37	2	87085532	87085532	+	Silent	SNP	A	A	G			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	2	87085532	87085532	A	G	SNP	CD8B	ENST00000331469	human	ensembl	69_37n	-1	known	silent	c.51	p.H17	0.000	pfscan_Ig-like	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	CD8B	HGNC	ENSG00000172116	60	0	0.00	57	15	20.83	-	-	-
CSMD1	0	genome.wustl.edu	37	8	3008925	3008925	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	8	3008925	3008925	C	T	SNP	CSMD1	ENST00000520002	human	ensembl	69_37n	-1	known	missense	c.6028	p.G2010S	1.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	61	0	0.00	60	16	21.05	-	-	-
DNAH9	0	genome.wustl.edu	37	17	11603102	11603102	+	Missense_Mutation	SNP	C	C	A			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	17	11603102	11603102	C	A	SNP	DNAH9	ENST00000262442	human	ensembl	69_37n	+1	known	missense	c.4927	p.L1643I	0.073	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174	73	0	0.00	72	13	15.29	-	-	-
GATA3	0	genome.wustl.edu	37	10	8111550	8111550	+	Nonsense_Mutation	SNP	A	A	T			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	10	8111550	8111550	A	T	SNP	GATA3	ENST00000379328	human	ensembl	69_37n	+1	known	nonsense	c.1039	p.K347*	1.000	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485	65	0	0.00	57	12	17.39	-	-	-
GUSB	0	genome.wustl.edu	37	7	65440012	65440012	+	Missense_Mutation	SNP	T	T	C			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	7	65440012	65440012	T	C	SNP	GUSB	ENST00000304895	human	ensembl	69_37n	-1	known	missense	c.959	p.Y320C	1.000	pfam_Glyco_hydro_2_Ig-like,superfamily_Glyco_hydro_2_Ig-like	pfam_Glyco_hydro_2_TIM,pfam_Glyco_hydro_2_N,pfam_Glyco_hydro_2_Ig-like,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,superfamily_Glyco_hydro_2_Ig-like,prints_Glyco_hydro_2	-	no_errors	GUSB	HGNC	ENSG00000169919	25	0	0.00	32	6	15.79	-	-	-
HEPACAM2	0	genome.wustl.edu	37	7	92848661	92848661	+	Silent	SNP	T	T	A			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	7	92848661	92848661	T	A	SNP	HEPACAM2	ENST00000394468	human	ensembl	69_37n	-1	known	silent	c.183	p.A61	0.681	pfam_Ig_V-set,smart_Ig_sub	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	HEPACAM2	HGNC	ENSG00000188175	85	0	0.00	87	18	17.14	-	-	-
KCTD3	0	genome.wustl.edu	37	1	215793916	215793916	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	1	215793916	215793916	C	T	SNP	KCTD3	ENST00000259154	human	ensembl	69_37n	+1	known	missense	c.2404	p.R802W	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,superfamily_WD40_repeat_dom,smart_BTB/POZ-like,smart_WD40_repeat,pfscan_BTB/POZ-like	-	no_errors	KCTD3	HGNC	ENSG00000136636	14	0	0.00	19	12	38.71	-	-	-
KCTD5	0	genome.wustl.edu	37	16	2745959	2745959	+	Silent	SNP	C	C	T			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	16	2745959	2745959	C	T	SNP	KCTD5	ENST00000301738	human	ensembl	69_37n	+1	known	silent	c.276	p.I92	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD5	HGNC	ENSG00000167977	12	0	0.00	14	12	46.15	-	-	-
LILRA5	0	genome.wustl.edu	37	19	54823200	54823200	+	Missense_Mutation	SNP	G	G	A			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	19	54823200	54823200	G	A	SNP	LILRA5	ENST00000301219	human	ensembl	69_37n	-1	known	missense	c.343	p.R115C	0.000	smart_Ig_sub,smart_Ig_sub2	smart_Ig_sub,smart_Ig_sub2	-	no_errors	LILRA5	HGNC	ENSG00000187116	49	0	0.00	38	18	32.14	-	-	-
MAP3K9	0	genome.wustl.edu	37	14	71206700	71206700	+	Frame_Shift_Del	DEL	A	A	-			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	14	71206700	71206700	A	-	DEL	MAP3K9	ENST00000553414	human	ensembl	69_37n	-1	putative	frame_shift_del	c.831	p.L278fs	0.995	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K9	HGNC	ENSG00000006432	42	0	0.00	46	14	22.95	-	-	-
MCF2	0	genome.wustl.edu	37	X	138689712	138689712	+	RNA	SNP	G	G	A			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	X	138689712	138689712	G	A	SNP	MCF2	ENST00000483690	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MCF2	HGNC	ENSG00000101977	12	0	0.00	10	5	33.33	-	-	-
MFF	0	genome.wustl.edu	37	2	228211954	228211954	+	Silent	SNP	G	G	A			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	2	228211954	228211954	G	A	SNP	MFF	ENST00000353339	human	ensembl	69_37n	+1	known	silent	c.606	p.S202	1.000	pfam_FATE/Miff/Tango-11	pfam_FATE/Miff/Tango-11	-	no_errors	MFF	HGNC	ENSG00000168958	60	0	0.00	41	10	19.61	-	-	-
MLL3	0	genome.wustl.edu	37	7	151896463	151896463	+	Nonsense_Mutation	SNP	G	G	A			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	7	151896463	151896463	G	A	SNP	MLL3	ENST00000355193	human	ensembl	69_37n	-1	known	nonsense	c.4174	p.Q1392*	0.599	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	MLL3	HGNC	ENSG00000055609	23	0	0.00	34	18	34.62	-	-	-
NCOR1	0	genome.wustl.edu	37	17	15968898	15968898	+	Frame_Shift_Del	DEL	T	T	-			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	17	15968898	15968898	T	-	DEL	NCOR1	ENST00000268712	human	ensembl	69_37n	-1	known	frame_shift_del	c.4852	p.I1618fs	1.000	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR1	HGNC	ENSG00000141027	90	0	0.00	86	10	10.31	-	-	-
NPEPPS	0	genome.wustl.edu	37	17	45663749	45663749	+	Missense_Mutation	SNP	G	G	A			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	17	45663749	45663749	G	A	SNP	NPEPPS	ENST00000322157	human	ensembl	69_37n	+1	known	missense	c.965	p.G322D	1.000	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	NPEPPS	HGNC	ENSG00000141279	40	0	0.00	48	6	11.11	-	-	-
NRXN2	0	genome.wustl.edu	37	11	64419603	64419603	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	11	64419603	64419603	C	T	SNP	NRXN2	ENST00000265459	human	ensembl	69_37n	-1	known	missense	c.2440	p.A814T	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_EGF-like,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN2	HGNC	ENSG00000110076	16	0	0.00	21	6	22.22	-	-	-
OLFML2B	0	genome.wustl.edu	37	1	161954651	161954651	+	Missense_Mutation	SNP	T	T	C			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	1	161954651	161954651	T	C	SNP	OLFML2B	ENST00000294794	human	ensembl	69_37n	-1	known	missense	c.1594	p.N532D	1.000	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	pfam_Olfac-like,superfamily_NA-bd_OB-fold-like,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML2B	HGNC	ENSG00000162745	69	0	0.00	131	28	17.61	-	-	-
OR2T33	0	genome.wustl.edu	37	1	248436527	248436527	+	Missense_Mutation	SNP	A	A	C			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	1	248436527	248436527	A	C	SNP	OR2T33	ENST00000318021	human	ensembl	69_37n	-1	known	missense	c.590	p.M197R	0.018	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2T33	HGNC	ENSG00000177212	28	0	0.00	72	14	16.28	-	-	-
PFDN4	0	genome.wustl.edu	37	20	52835691	52835691	+	RNA	SNP	C	C	T			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	20	52835691	52835691	C	T	SNP	PFDN4	ENST00000487129	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.202	-	-	-	no_errors	PFDN4	HGNC	ENSG00000101132	45	0	0.00	54	9	14.29	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178922328	178922328	+	Missense_Mutation	SNP	C	C	G			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	3	178922328	178922328	C	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1097	p.P366R	1.000	pfam_PI3K_C2_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_C2_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	38	0	0.00	38	10	20.83	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178948044	178948044	+	Missense_Mutation	SNP	A	A	G			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	3	178948044	178948044	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.2816	p.D939G	1.000	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	31	0	0.00	30	7	18.92	-	-	-
TSHR	0	genome.wustl.edu	37	14	81609335	81609335	+	Missense_Mutation	SNP	G	G	C			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	14	81609335	81609335	G	C	SNP	TSHR	ENST00000298171	human	ensembl	69_37n	+1	known	missense	c.933	p.Q311H	0.981	prints_TSH_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_TSH_rcpt,prints_Gphrmn_rcpt,prints_7TM_GPCR_Rhodpsn,prints_FSH_rcpt,prints_LSH_rcpt	-	no_errors	TSHR	HGNC	ENSG00000165409	19	0	0.00	12	6	33.33	-	-	-
UAP1L1	0	genome.wustl.edu	37	9	139977163	139977163	+	Silent	SNP	G	G	A			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	9	139977163	139977163	G	A	SNP	UAP1L1	ENST00000409858	human	ensembl	69_37n	+1	known	silent	c.1506	p.P502	0.000	NULL	pfam_UDPGP_trans	-	no_errors	UAP1L1	HGNC	ENSG00000197355	62	0	0.00	58	21	26.58	-	-	-
UTRN	0	genome.wustl.edu	37	6	144843127	144843127	+	Missense_Mutation	SNP	T	T	G			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	6	144843127	144843127	T	G	SNP	UTRN	ENST00000367545	human	ensembl	69_37n	+1	known	missense	c.5553	p.I1851M	0.147	pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_Rsp5_WWP,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_Rsp5_WWP,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_Rsp5_WWP,pfscan_Znf_ZZ	-	no_errors	UTRN	HGNC	ENSG00000152818	15	0	0.00	18	7	26.92	-	-	-
VSIG4	0	genome.wustl.edu	37	X	65241995	65241995	+	Missense_Mutation	SNP	G	G	A			TCGA-OL-A5RX-01A-11D-A28B-09	TCGA-OL-A5RX-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	122e2093-6f49-473d-a23b-aa7913bfbc9f	e8ded17f-7468-4657-aabd-21f759487ce5	X	65241995	65241995	G	A	SNP	VSIG4	ENST00000427538	human	ensembl	69_37n	-1	known	missense	c.755	p.A252V	0.000	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	VSIG4	HGNC	ENSG00000155659	48	0	0.00	66	13	16.46	-	-	-
