Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq
DENND5B	160518	hgsc.bcm.edu;broad.mit.edu	37	12	31604973	31604973	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	DENND5B	NM_144973	exon5	c.1531delA	p.T511fs	.	.	126.0	12.0	212.0	0.0	.	114
TEX101	83639	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	43920572	43920572	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	TEX101	NM_031451	exon7	c.G310A	p.E104K	GAAGGGGAGGAGG	.	108.0	17.0	138.0	0.0	.	28
VEZF1	7716	hgsc.bcm.edu;bcgsc.ca	37	17	56056604	56056604	+	Silent	SNP	T	T	C	rs138088904	byfrequency	TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	VEZF1,colon,carcinoma,0,7	VEZF1	NM_007146	exon5	c.A1047G	p.Q349Q	TTGTTGTTGCTGC	.	141.0	6.0	244.0	2.0	0.001	50
LRBA	987	hgsc.bcm.edu;bcgsc.ca	37	4	151773447	151773447	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	LRBA	NM_006726	exon23	c.T3415C	p.S1139P	CTTCAGATGCAGC	.	141.0	6.0	186.0	0.0	.	253
CEPT1	10390	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	111702071	111702071	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	CEPT1	NM_006090	exon3	c.G409T	p.G137W	ATTGATGGGAAAC	.	273.0	11.0	345.0	0.0	.	25
NTPCR	84284	hgsc.bcm.edu;bcgsc.ca	37	1	233105712	233105712	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	NTPCR	NM_032324	exon4	c.A352G	p.M118V	GGGAAGATGGAGC	.	73.0	4.0	130.0	0.0	.	15
TPX2	22974	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	20	30365314	30365314	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	TPX2	NM_012112	exon9	c.G755T	p.S252I	CAGTGAGCCAGGT	.	81.0	8.0	145.0	0.0	.	61
TTC40	54777	hgsc.bcm.edu;bcgsc.ca	37	10	134672635	134672635	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	TTC40	NM_001200049	exon38	c.T5315C	p.I1772T	CAGTCGATAAACT	.	74.0	4.0	162.0	0.0	.	100
SACM1L	22908	hgsc.bcm.edu;bcgsc.ca	37	3	45744960	45744960	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	SACM1L	NM_014016	exon2	c.A63G	p.E21E	TGTGGAAGCTTGT	.	81.0	4.0	137.0	0.0	.	38
ZSWIM2	151112	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	187693106	187693106	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ZSWIM2	NM_182521	exon9	c.G1507T	p.V503L	ATGACACAGTGGG	.	188.0	25.0	238.0	0.0	.	119
CYP1A2	1544	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	75047231	75047231	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	CYP1A2	NM_000761	exon7	c.T1353C	p.F451F	GCTGTTTGGCATG	.	64.0	8.0	151.0	0.0	.	70
TTC4	7268	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	1	55182348	55182348	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	TTC4	NM_004623	exon2	c.T187C	p.C63R	TTGGCTTGTCTCC	.	46.0	5.0	75.0	0.0	.	21
CUBN	8029	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	17153015	17153015	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	CUBN	NM_001081	exon9	c.C918G	p.I306M	TTCATTGATATCT	.	65.0	11.0	109.0	0.0	.	515
CDC27	996	hgsc.bcm.edu;bcgsc.ca	37	17	45234327	45234327	+	Missense_Mutation	SNP	C	C	T	rs7350889	bycluster;byhapmap	TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	CDC27_ENST00000531206,NS,adenoma,0,4	CDC27	NM_001114091	exon7	c.G794A	p.G265D	CTTCGACCAGTTT	.	110.0	8.0	147.0	1.0	.	337
DSG3	1830	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	18	29045290	29045290	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	DSG3	NM_001944	exon10	c.G1281C	p.M427I	TGTCATGGGACGT	.	179.0	12.0	277.0	0.0	.	172
MOCS2	4338	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	5	52402917	52402917	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	MOCS2	NM_004531	exon3	c.G88T	p.E30X	ATGGCTCAAAAGC	.	58.0	12.0	91.0	0.0	.	28
ATRX	546	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	76972657	76972657	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ATRX	NM_138270	exon2	c.A84G	p.E28E	TTCAGATTCTTCT	.	55.0	7.0	84.0	0.0	.	833
CEP97	79598	hgsc.bcm.edu;bcgsc.ca	37	3	101445525	101445525	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	CEP97	NM_024548	exon2	c.A131G	p.D44G	TTCTGGATAAAAA	.	73.0	4.0	95.0	0.0	.	122
ASTE1	28990	hgsc.bcm.edu;bcgsc.ca	37	3	130733158	130733158	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ASTE1	NM_014065	exon6	c.A1783G	p.S595G	ATATGCTCAGGAG	.	121.0	5.0	225.0	0.0	.	67
CXorf22	170063	hgsc.bcm.edu;bcgsc.ca	37	X	35966467	35966467	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	CXorf22	NM_152632	exon4	c.T554C	p.I185T	TACCCATCCTCAT	.	52.0	5.0	78.0	0.0	.	272
PIK3CA	5290	hgsc.bcm.edu;bcgsc.ca	37	3	178943817	178943817	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	PIK3CA	NM_006218	exon17	c.T2484C	p.G828G	TCAAGGTCTTGAT	.	75.0	4.0	142.0	0.0	.	8460
MED13L	23389	hgsc.bcm.edu;bcgsc.ca	37	12	116413459	116413459	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	MED13L	NM_015335	exon24	c.G5449A	p.G1817S	CCTCACCAAACGT	.	75.0	4.0	138.0	0.0	.	193
ANKRD32	84250	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	5	93964624	93964624	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ANKRD32	NM_032290	exon2	c.A109G	p.S37G	ATTAAGAGTGAGG	.	83.0	4.0	103.0	0.0	.	117
LAMA1	284217	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	7016513	7016513	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	LAMA1	NM_005559	exon21	c.C2966A	p.A989D	TGGTAGGCGTAGA	.	56.0	10.0	66.0	0.0	.	458
INHA	3623	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	220439447	220439447	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	INHA	NM_002191	exon2	c.A300G	p.R100R	TGCCAGAGGGCTG	.	78.0	4.0	113.0	0.0	.	30
MPDZ	8777	hgsc.bcm.edu;bcgsc.ca	37	9	13150535	13150535	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	MPDZ	NM_003829	exon25	c.T3605C	p.L1202S	GGTTTCAAGGTTC	.	89.0	5.0	157.0	0.0	.	324
FBN2	2201	hgsc.bcm.edu;bcgsc.ca	37	5	127712455	127712455	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	FBN2	NM_001999	exon14	c.T1941C	p.F647F	CAAGACAAATCCT	.	85.0	4.0	160.0	0.0	.	858
ZNF639	51193	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	179051221	179051221	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ZNF639	NM_016331	exon7	c.A469G	p.N157D	ACAGAAAACAATT	.	152.0	7.0	230.0	0.0	.	45
CEP350	9857	hgsc.bcm.edu;bcgsc.ca	37	1	180062484	180062484	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	CEP350	NM_014810	exon34	c.A7244G	p.K2415R	GAGATAAGCCACA	.	149.0	6.0	214.0	0.0	.	418
MFSD2B	388931	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	2	24236185	24236185	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	MFSD2B	NM_001080473	exon2	c.A127G	p.T43A	TTCTGTACAAAGG	.	41.0	4.0	75.0	0.0	.	45
ULK2	9706	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	19705089	19705089	+	Splice_Site	SNP	C	C	A	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ULK2	NM_014683	exon17	c.1441+1G>T	.	TACTTACCCAAAG	.	71.0	8.0	98.0	0.0	.	142
TMC1	117531	hgsc.bcm.edu;bcgsc.ca	37	9	75403363	75403363	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	TMC1	NM_138691	exon14	c.A993G	p.A331A	AACAGCAGACAAC	.	90.0	4.0	122.0	0.0	.	87
ANGPT2	285	hgsc.bcm.edu;bcgsc.ca	37	8	6420324	6420324	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ANGPT2	NM_001118888	exon1	c.T132C	p.T44T	GAGGAAAGTGTAG	.	92.0	4.0	195.0	0.0	.	126
PIWIL3	440822	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	25153964	25153964	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	PIWIL3	NM_001008496	exon4	c.C266T	p.P89L	TGCAAGGGCGCTG	.	95.0	20.0	177.0	0.0	.	115
SUGT1	10910	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	13	53237230	53237230	+	Splice_Site	SNP	G	G	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	SUGT1	NM_001130912	exon8	c.479-1G>C	.	TTAATAGGCTCAG	.	187.0	16.0	278.0	0.0	.	37
STRIP2	57464	hgsc.bcm.edu;bcgsc.ca	37	7	129079892	129079892	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	.	NM_020704	exon2	c.T159C	p.F53F	GGAGTTTGAGTAT	.	169.0	7.0	267.0	0.0	.	.
CTNNB1	1499	hgsc.bcm.edu;bcgsc.ca	37	3	41266610	41266610	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	CTNNB1	NM_001098209	exon4	c.T407C	p.V136A	ATGCAGTTGTAAA	.	69.0	12.0	77.0	0.0	.	4904
GPR161	23432	hgsc.bcm.edu;bcgsc.ca	37	1	168066409	168066409	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	GPR161	NM_001267609	exon4	c.A496G	p.M166V	GTGCCATCACAGC	.	72.0	4.0	102.0	0.0	.	56
DHDH	27294	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	49442937	49442937	+	Missense_Mutation	SNP	G	G	T	rs35453148	bycluster;byfrequency;by1000genomes;alternate_allele	TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	DHDH,brainstem,primitive_neuroectodermal_tumour-medulloblastoma,0,1	DHDH	NM_014475	exon4	c.G598T	p.V200L	TCTGTCGTGGGAA	.	32.0	4.0	52.0	0.0	.	35
SV2C	22987	hgsc.bcm.edu;bcgsc.ca	37	5	75587051	75587051	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	SV2C	NM_014979	exon7	c.C1143T	p.N381N	GGTAAACAAAATA	.	113.0	5.0	152.0	0.0	.	97
CPSF2	53981	hgsc.bcm.edu;bcgsc.ca	37	14	92621560	92621560	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	CPSF2	NM_017437	exon11	c.T1335C	p.G445G	GAAAGGTGAAGGC	.	117.0	5.0	135.0	0.0	.	63
ZNF2	7549	hgsc.bcm.edu;bcgsc.ca	37	2	95843262	95843262	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ZNF2	NM_021088	exon3	c.T68C	p.F23S	TGGTTTTCACAGA	.	80.0	5.0	153.0	0.0	.	21
CXorf57	55086	hgsc.bcm.edu;bcgsc.ca	37	X	105876229	105876229	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	CXorf57	NM_018015	exon5	c.A1156G	p.R386G	GTAGGAAGGGTCC	.	186.0	8.0	238.0	0.0	.	107
THUMPD3	25917	hgsc.bcm.edu;bcgsc.ca	37	3	9425958	9425958	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	THUMPD3	NM_001114092	exon9	c.T1298C	p.V433A	GCCGTGTCTGCAC	.	82.0	4.0	145.0	0.0	.	46
KIRREL2	84063	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	19	36350514	36350514	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	KIRREL2	NM_199180	exon5	c.T654C	p.A218A	CACAGCTATCACA	.	40.0	4.0	40.0	0.0	.	170
ROS1	6098	hgsc.bcm.edu;bcgsc.ca	37	6	117718268	117718268	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ROS1	NM_002944	exon7	c.G589A	p.A197T	AAGGTGCAGTTTC	.	96.0	4.0	158.0	0.0	.	728
CHAMP1	283489	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	115089644	115089644	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	.	NM_001164144	exon3	c.T327C	p.P109P	AAGCCCTCCTCTT	.	158.0	24.0	268.0	0.0	.	.
FBN1	2200	hgsc.bcm.edu;bcgsc.ca	37	15	48752514	48752514	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	FBN1	NM_000138	exon43	c.A5225G	p.D1742G	AACTCATCTGCAA	.	72.0	5.0	87.0	0.0	.	310
CNTRL	11064	hgsc.bcm.edu;bcgsc.ca	37	9	123874744	123874744	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	CNTRL	NM_007018	exon7	c.A1010G	p.Q337R	TAAAACAGAAGAC	.	76.0	4.0	133.0	0.0	.	161
HHIP	64399	hgsc.bcm.edu;bcgsc.ca	37	4	145636456	145636456	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	HHIP	NM_022475	exon10	c.T1552C	p.F518L	AGGAATTTCCTAA	.	95.0	5.0	131.0	0.0	.	100
GPATCH1	55094	hgsc.bcm.edu;bcgsc.ca	37	19	33579153	33579153	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	GPATCH1	NM_018025	exon2	c.A187G	p.N63D	TACTTCAATACTG	.	100.0	4.0	200.0	0.0	.	79
TCAP	8557	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	37822111	37822111	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	TCAP	NM_003673	exon2	c.T253C	p.Y85H	CTGCCCTACCAGC	.	43.0	8.0	56.0	0.0	.	12
ZNF320	162967	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	53384285	53384285	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ZNF320	NM_207333	exon4	c.C1094T	p.A365V	CGGAAAGCCTTGT	.	111.0	5.0	157.0	0.0	.	67
CNKSR2	22866	hgsc.bcm.edu;bcgsc.ca	37	X	21458842	21458842	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	CNKSR2	NM_001168647	exon4	c.A462G	p.S154S	CTATTCAGTTACA	.	55.0	4.0	60.0	0.0	.	158
ZNF471	57573	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	57027722	57027722	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ZNF471	NM_020813	exon3	c.T112G	p.L38V	AAGCGTTTATACA	.	163.0	16.0	255.0	0.0	.	99
TXNL4B	54957	hgsc.bcm.edu;bcgsc.ca	37	16	72120695	72120695	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	TXNL4B	NM_001142318	exon4	c.A291G	p.P97P	GTGATCTGGAGAT	.	109.0	5.0	157.0	0.0	.	17
ABHD1	84696	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	27351823	27351823	+	Missense_Mutation	SNP	C	C	A	rs370556895	alternate_allele	TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ABHD1	NM_032604	exon3	c.C286A	p.Q96K	ATCCTCCAAACAC	.	71.0	8.0	103.0	0.0	.	18
IMPACT	55364	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	22029801	22029801	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	IMPACT	NM_018439	exon10	c.G778A	p.V260I	AAGAATGTCATGG	.	93.0	11.0	123.0	0.0	.	37
MMS22L	253714	hgsc.bcm.edu;bcgsc.ca	37	6	97627437	97627437	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	MMS22L	NM_198468	exon18	c.2385-2A>G	.	ATGTGCTGTAGAA	.	55.0	4.0	61.0	0.0	.	102
METTL12	751071	hgsc.bcm.edu;bcgsc.ca	37	11	62434058	62434058	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	METTL12	NM_001043229	exon3	c.T258C	p.T86T	TGGGACTTCCAGC	.	77.0	5.0	87.0	0.0	.	11
LRRCC1	85444	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	86022370	86022370	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	LRRCC1	NM_033402	exon3	c.C331T	p.L111L	ATTAATCTGACTA	.	107.0	22.0	123.0	0.0	.	212
CUBN	8029	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	10	17024537	17024537	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	CUBN	NM_001081	exon31	c.T4641C	p.R1547R	GAGAACACGATGA	.	58.0	7.0	87.0	0.0	.	515
NUP98	4928	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	3720345	3720345	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	NUP98	NM_016320	exon25	c.A3976G	p.I1326V	CACTGATCCTTTT	.	94.0	8.0	139.0	0.0	.	149
ARF4	378	hgsc.bcm.edu;bcgsc.ca	37	3	57563094	57563094	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ARF4	NM_001660	exon4	c.T279C	p.D93D	GTTGCTATCTACC	.	90.0	4.0	175.0	0.0	.	14
TUBA1B	10376	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	12	49522077	49522077	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	TUBA1B	NM_006082	exon4	c.C1020T	p.S340S	CTGGATGCTGCGC	.	182.0	32.0	282.0	0.0	.	24
FARP1	10160	hgsc.bcm.edu;bcgsc.ca	37	13	99063059	99063059	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	FARP1	NM_005766	exon15	c.T1674C	p.D558D	GAAGGATCTCGAA	.	148.0	6.0	224.0	0.0	.	207
DGKA	1606	hgsc.bcm.edu;bcgsc.ca	37	12	56345833	56345833	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	DGKA	NM_201554	exon19	c.T1602C	p.A534A	TATTGCTCATCGA	.	73.0	5.0	121.0	0.0	.	70
IDH2	3418	hgsc.bcm.edu;bcgsc.ca	37	15	90628063	90628063	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	IDH2	NM_002168	exon10	c.T1256C	p.I419T	CCGTGAATGCAGC	.	69.0	4.0	87.0	0.0	.	1372
ZC3H18	124245	hgsc.bcm.edu;bcgsc.ca	37	16	88666240	88666240	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ZC3H18	NM_144604	exon6	c.T972C	p.D324D	GCCTGATTTTGAA	.	64.0	4.0	106.0	0.0	.	90
PCDH19	57526	hgsc.bcm.edu;bcgsc.ca	37	X	99657571	99657571	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	PCDH19	NM_001184880	exon3	c.A2567G	p.Q856R	GGCCCCTGGCTGT	.	69.0	4.0	139.0	0.0	.	269
COA5	493753	hgsc.bcm.edu;bcgsc.ca	37	2	99217252	99217252	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	.	NM_001008215	exon3	c.A188G	p.D63G	CTGTTATCCAACT	.	81.0	4.0	120.0	0.0	.	.
SSPO	23145	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	7	149500388	149500388	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	.	NM_198455	exon53	c.C7914T	p.S2638S	ACCCTCCTGCCTG	.	39.0	5.0	48.0	0.0	.	.
POU5F2	134187	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	93076777	93076777	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	POU5F2	NM_153216	exon1	c.T493G	p.C165G	AGCGGCAGATGGT	.	45.0	7.0	71.0	0.0	.	10
CEP63	80254	hgsc.bcm.edu;bcgsc.ca	37	3	134270832	134270832	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	CEP63	NM_025180	exon13	c.A1445G	p.K482R	TGATGAAATTGGA	.	56.0	4.0	90.0	0.0	.	56
SLC6A1	6529	hgsc.bcm.edu;bcgsc.ca	37	3	11072874	11072874	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	SLC6A1	NM_003042	exon13	c.T1335C	p.Y445Y	TATTTATGTCTTC	.	92.0	5.0	144.0	0.0	.	88
C1orf131	128061	hgsc.bcm.edu;bcgsc.ca	37	1	231360124	231360124	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	C1orf131	NM_152379	exon7	c.A783G	p.S261S	TCCATTTGACAAA	.	165.0	9.0	220.0	0.0	.	30
SPATA6L	55064	hgsc.bcm.edu;bcgsc.ca	37	9	4604223	4604223	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	SPATA6L	NM_001039395	exon10	c.A962G	p.Y321C	AGAGGGTAGCTTG	.	111.0	6.0	155.0	0.0	.	3
STXBP4	252983	hgsc.bcm.edu;bcgsc.ca	37	17	53155463	53155463	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	STXBP4	NM_178509	exon14	c.A1213G	p.R405G	AAAAAGAGAATCA	.	121.0	5.0	154.0	0.0	.	41
PHACTR3	116154	hgsc.bcm.edu;broad.mit.edu	37	20	58342290	58342290	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	PHACTR3	NM_080672	exon5	c.C591A	p.L197L	CAGCCTCCTGCCC	.	103.0	7.0	145.0	0.0	.	104
ATP5B	506	ucsc.edu;bcgsc.ca	37	12	57038965	57038965	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ATP5B	NM_001686	exon2	c.C300T	p.A100A	ATGCTGGGCCACC	.	69.0	0.0	93.0	1.0	.	91
EIF4G2	1982	broad.mit.edu;ucsc.edu	37	11	10825934	10825934	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	EIF4G2	NM_001042559	exon6	c.A383G	p.Y128C	GAGCTATACTTTG	.	180.0	0.0	183.0	0.0	.	91
F8	2157	ucsc.edu;bcgsc.ca	37	X	154124423	154124423	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	F8	NM_000132	exon22	c.T6358C	p.F2120L	TGATAAACTGAGA	.	85.0	0.0	63.0	1.0	.	182
FNIP1	96459	broad.mit.edu;bcgsc.ca	37	5	131008597	131008597	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	FNIP1	NM_133372	exon14	c.G1540A	p.G514S	GAGAGCCAATAGC	.	66.0	0.0	98.0	0.0	.	92
GRM2	2912	broad.mit.edu;bcgsc.ca	37	3	51749655	51749664	+	Frame_Shift_Del	DEL	CTTCATTGCC	CTTCATTGCC	-	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	CTTCATTGCC	CTTCATTGCC	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	GRM2	NM_000839	exon4	c.1866_1875del	p.622_625del	CTTCATCTTCATT	.	220.0	0.0	200.0	0.0	.	522
IL6ST	3572	broad.mit.edu;bcgsc.ca	37	5	55260061	55260075	+	In_Frame_Del	DEL	AATACACAGTAGAAT	AATACACAGTAGAAT	-	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	AATACACAGTAGAAT	AATACACAGTAGAAT	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	IL6ST	NM_175767	exon6	c.557_571del	p.186_191del	TGACAAAATACAC	.	299.0	0.0	326.0	0.0	.	290
MAP2	4133	broad.mit.edu;bcgsc.ca	37	2	210560370	210560370	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	MAP2	NM_002374	exon7	c.C3476G	p.S1159C	AATCATCTCTAAT	.	176.0	0.0	143.0	1.0	.	591
PDE1B	5153	ucsc.edu;bcgsc.ca	37	12	54970385	54970385	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	PDE1B	NM_000924	exon14	c.G1407A	p.V469V	GGATGTGGAAGTG	.	72.0	0.0	73.0	0.0	.	92
PLCG2	5336	broad.mit.edu;ucsc.edu	37	16	81819689	81819689	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	PLCG2	NM_002661	exon2	c.G95A	p.S32N	TGTTCAGCTTCCG	.	104.0	0.0	100.0	0.0	.	892
SLC10A2	6555	broad.mit.edu;ucsc.edu;bcgsc.ca	37	13	103698606	103698606	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	SLC10A2	NM_000452	exon6	c.T924C	p.Y308Y	TGCCACATAAACT	.	241.0	0.0	235.0	2.0	.	94
STAU1	6780	ucsc.edu;bcgsc.ca	37	20	47741040	47741040	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	STAU1	NM_017453	exon7	c.A694G	p.K232E	TGCTTTTCCCTTC	.	108.0	0.0	78.0	0.0	.	230
ZNF271	10778	broad.mit.edu;bcgsc.ca	37	18	32889822	32889822	+	RNA	SNP	G	G	T	novel		TCGA-DD-A1ED-01A-11D-A152-10	TCGA-DD-A1ED-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4c3eda94-56f4-46d3-8c88-50d476e773f6	09455f77-1bc1-4f4b-9b75-dd79fd3237c3	.	ZNF271	.	.	.	.	ACATGAGATTGGT	.	71.0	0.0	91.0	0.0	.	90
