Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	dbSNP_AF	Algorithm
METTL18	92342	hgsc.bcm.edu	hg19	1	169761971	169761971	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	METTL18	NM_033418	exon2	c.T866G	p.L289R	AGAATGAGATCAT	.	352.0	102.0	222.0	0.0	.	23	.	.	Atlas-SNP
KCTD3	51133	hgsc.bcm.edu	hg19	1	215768702	215768702	+	Silent	SNP	G	G	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	KCTD3	NM_016121	exon10	c.G822A	p.V274V	AGGAGTGTTCAGC	.	113.0	36.0	77.0	0.0	.	101	.	.	Atlas-SNP
EML4	27436	hgsc.bcm.edu	hg19	2	42557132	42557132	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	EML4	NM_019063	exon23	c.G2731A	p.E911K	ACAGCTGAAGAGG	.	102.0	46.0	101.0	0.0	.	92	.	.	Atlas-SNP
XIRP2	129446	hgsc.bcm.edu	hg19	2	168105919	168105919	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	XIRP2	NM_152381	exon9	c.T8017A	p.C2673S	TCAGCTTGCGAAA	.	389.0	197.0	328.0	1.0	.	914	.	.	Atlas-SNP
NFE2L2	4780	hgsc.bcm.edu	hg19	2	178098804	178098804	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	NFE2L2,NS,carcinoma,0,4	NFE2L2	NM_006164	exon2	c.G241T	p.G81C	ATTCACCTGTCTC	.	85.0	39.0	70.0	0.0	.	225	.	.	Atlas-SNP
GULP1	51454	hgsc.bcm.edu	hg19	2	189434772	189434772	+	Silent	SNP	A	A	G	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	GULP1	NM_016315	exon9	c.A534G	p.T178T	AGAAACAGAAAAT	.	516.0	167.0	395.0	0.0	.	35	.	.	Atlas-SNP
SLC4A3	6508	hgsc.bcm.edu	hg19	2	220493162	220493162	+	Silent	SNP	A	A	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	SLC4A3	NM_005070	exon3	c.A87T	p.P29P	AAGTCCAGACGTG	.	222.0	94.0	198.0	0.0	.	144	.	.	Atlas-SNP
LARS2	23395	hgsc.bcm.edu	hg19	3	45557708	45557708	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	LARS2	NM_015340	exon17	c.A1984G	p.I662V	GACACGATTCGGC	.	183.0	64.0	166.0	0.0	.	48	.	.	Atlas-SNP
CACNA2D2	9254	hgsc.bcm.edu	hg19	3	50403525	50403525	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	CACNA2D2	NM_001174051	exon33	c.C2800T	p.R934C	CCTTGCGGGTGTA	.	76.0	29.0	90.0	0.0	.	82	.	.	Atlas-SNP
DOCK3	1795	hgsc.bcm.edu	hg19	3	51418626	51418626	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	DOCK3	NM_004947	exon53	c.G5729A	p.R1910H	CACCTCGCACTGA	.	100.0	44.0	75.0	0.0	.	397	.	.	Atlas-SNP
FAM208A	23272	hgsc.bcm.edu	hg19	3	56674029	56674029	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	FAM208A	NM_001112736	exon16	c.C2749A	p.L917M	GAATCAGTTTCCA	.	147.0	27.0	104.0	0.0	.	113	.	.	Atlas-SNP
RYBP	23429	hgsc.bcm.edu	hg19	3	72427650	72427650	+	Silent	SNP	T	T	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	RYBP	NM_012234	exon4	c.A543T	p.A181A	TGACCCTGCACTG	.	133.0	52.0	130.0	0.0	.	13	.	.	Atlas-SNP
NLGN1	22871	hgsc.bcm.edu	hg19	3	173996998	173996998	+	Missense_Mutation	SNP	G	G	A	rs371578371		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	NLGN1	NM_014932	exon6	c.G1207A	p.D403N	GATAGCGATGATG	.	159.0	66.0	157.0	0.0	.	209	.	.	Atlas-SNP
MUC4	4585	hgsc.bcm.edu	hg19	3	195512150	195512150	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	MUC4	NM_018406	exon2	c.G6301T	p.D2101Y	AAGCGTCGGTGAC	.	403.0	59.0	294.0	0.0	.	1505	.	.	Atlas-SNP
CRMP1	1400	hgsc.bcm.edu	hg19	4	5841321	5841321	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	CRMP1	NM_001014809	exon9	c.C1238A	p.A413E	AACGCCGCAGCCT	.	75.0	31.0	62.0	0.0	.	118	.	.	Atlas-SNP
CRMP1	1400	hgsc.bcm.edu	hg19	4	5841322	5841322	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	CRMP1	NM_001014809	exon9	c.G1237A	p.A413T	ACGCCGCAGCCTT	.	76.0	30.0	63.0	0.0	.	118	.	.	Atlas-SNP
KIAA1239	57495	hgsc.bcm.edu	hg19	4	37246800	37246800	+	Silent	SNP	C	C	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	KIAA1239	NM_001144990	exon1	c.C111T	p.A37A	GCCCGCCGGCCGC	.	81.0	4.0	70.0	0.0	.	79	.	.	Atlas-SNP
PCDHGA4	56111	hgsc.bcm.edu	hg19	5	140735877	140735877	+	Silent	SNP	C	C	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	PCDHGA4	NM_018917	exon1	c.C1110T	p.N370N	TTTCAACGTGCAT	.	112.0	46.0	84.0	0.0	.	150	.	.	Atlas-SNP
ERVFRD-1	405754	hgsc.bcm.edu	hg19	6	11104810	11104810	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	ERVFRD-1	NM_207582	exon2	c.G734A	p.G245E	TTAGCTCCCTTGG	.	61.0	26.0	60.0	0.0	.	41	.	.	Atlas-SNP
OR5V1	81696	hgsc.bcm.edu	hg19	6	29323627	29323627	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	OR5V1	NM_030876	exon1	c.G346T	p.A116S	TTGCTGCCAGTAG	.	125.0	48.0	117.0	0.0	.	63	.	.	Atlas-SNP
PI16	221476	hgsc.bcm.edu	hg19	6	36930828	36930828	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	PI16,NS,neuroblastoma,0,1	PI16	NM_001199159	exon6	c.C710A	p.A237E	CCCTAGCAACGGG	.	153.0	74.0	137.0	0.0	.	50	.	.	Atlas-SNP
KCNK17	89822	hgsc.bcm.edu	hg19	6	39271861	39271861	+	Nonsense_Mutation	SNP	G	G	T	rs140102103	alternate_allele	TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	KCNK17	NM_001135111	exon4	c.C560A	p.S187X	AGGCCCGAGAGGA	.	87.0	4.0	68.0	0.0	.	61	.	G|1.000;A|0.000	Atlas-SNP
PRICKLE4	29964	hgsc.bcm.edu	hg19	6	41751951	41751951	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	PRICKLE4	NM_013397	exon4	c.A215T	p.Q72L	TCCTGCAGCAACT	.	104.0	47.0	87.0	0.0	.	29	.	.	Atlas-SNP
ABCB4	5244	hgsc.bcm.edu	hg19	7	87074258	87074258	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	ABCB4	NM_018850	exon10	c.G1039A	p.V347I	GGCCAACACTGAA	.	1941.0	856.0	1716.0	1.0	.	177	.	.	Atlas-SNP
SAMD9	54809	hgsc.bcm.edu	hg19	7	92731597	92731597	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	SAMD9	NM_001193307	exon2	c.G3814T	p.D1272Y	ATTCATCAAAAAA	.	189.0	72.0	219.0	0.0	.	239	.	.	Atlas-SNP
CNTNAP2	26047	hgsc.bcm.edu	hg19	7	146829391	146829391	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	CNTNAP2,NS,carcinoma,0,1	CNTNAP2	NM_014141	exon8	c.G1138A	p.A380T	TTCAACGCTACAA	.	109.0	38.0	79.0	0.0	.	392	.	.	Atlas-SNP
LZTS1	11178	hgsc.bcm.edu	hg19	8	20112506	20112506	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	LZTS1,NS,carcinoma,0,1	LZTS1	NM_021020	exon1	c.G187A	p.E63K	AGTCTTCGCTCTT	.	92.0	42.0	117.0	0.0	.	72	.	.	Atlas-SNP
SLC24A2	25769	hgsc.bcm.edu	hg19	9	19786033	19786033	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	SLC24A2,NS,carcinoma,0,1	SLC24A2	NM_001193288	exon1	c.G832A	p.V278I	TGAAAACCACATA	.	125.0	49.0	93.0	0.0	.	93	.	.	Atlas-SNP
ACO1	48	hgsc.bcm.edu	hg19	9	32430520	32430520	+	Silent	SNP	A	A	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	ACO1	NM_002197	exon14	c.A1674T	p.I558I	AGTAATAGCATAT	.	175.0	81.0	143.0	0.0	.	149	.	.	Atlas-SNP
AGTPBP1	23287	hgsc.bcm.edu	hg19	9	88272416	88272416	+	Silent	SNP	G	G	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	AGTPBP1	NM_015239	exon10	c.C843T	p.N281N	CTTGATGTTTGTA	.	108.0	58.0	98.0	0.0	.	128	.	.	Atlas-SNP
FIBCD1	84929	hgsc.bcm.edu	hg19	9	133799154	133799154	+	Missense_Mutation	SNP	G	G	T	rs369690143	alternate_allele	TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	FIBCD1	NM_001145106	exon5	c.C826A	p.R276S	CCGTGCGCATGTC	.	127.0	43.0	118.0	0.0	.	34	.	.	Atlas-SNP
FAM163B	642968	hgsc.bcm.edu	hg19	9	136444248	136444248	+	Silent	SNP	G	G	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	FAM163B	NM_001080515	exon2	c.C397T	p.L133L	GGGGCAGCTCCAC	.	124.0	47.0	84.0	0.0	.	7	.	.	Atlas-SNP
PHPT1	29085	hgsc.bcm.edu	hg19	9	139744507	139744507	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	PHPT1	NM_001135861	exon2	c.G203T	p.G68V	AGCAAGGCTGCGA	.	92.0	33.0	80.0	0.0	.	14	.	.	Atlas-SNP
DDB1	1642	hgsc.bcm.edu	hg19	11	61090560	61090560	+	Missense_Mutation	SNP	T	T	C	rs367862166		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	DDB1	NM_001923	exon8	c.A928G	p.I310V	CAGCAATAGAGGT	.	133.0	57.0	140.0	0.0	.	100	.	.	Atlas-SNP
ARHGEF17	9828	hgsc.bcm.edu	hg19	11	73021870	73021870	+	Silent	SNP	G	G	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	ARHGEF17	NM_014786	exon1	c.G2187A	p.E729E	AGGGGAGGCCTAC	.	33.0	10.0	30.0	0.0	.	117	.	.	Atlas-SNP
EP400	57634	hgsc.bcm.edu	hg19	12	132547105	132547105	+	Silent	SNP	G	G	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	EP400	NM_015409	exon47	c.G8193A	p.Q2731Q	GCAGCAGCAGCAG	.	111.0	22.0	55.0	0.0	.	370	.	.	Atlas-SNP
EP400	57634	hgsc.bcm.edu	hg19	12	132547108	132547108	+	Silent	SNP	G	G	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	EP400	NM_015409	exon47	c.G8196A	p.Q2732Q	GCAGCAGCAGCAG	.	113.0	27.0	59.0	0.0	.	370	.	.	Atlas-SNP
TGDS	23483	hgsc.bcm.edu	hg19	13	95248352	95248352	+	Silent	SNP	G	G	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	TGDS	NM_014305	exon1	c.C39T	p.P13P	GCCGCCGGGAAGA	.	179.0	78.0	167.0	0.0	.	24	.	.	Atlas-SNP
FERMT2	10979	hgsc.bcm.edu	hg19	14	53331148	53331148	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	FERMT2	NM_001135000	exon12	c.C1573T	p.R525C	GATAGCGGGGAGA	.	106.0	48.0	101.0	0.0	.	59	.	.	Atlas-SNP
SNW1	22938	hgsc.bcm.edu	hg19	14	78187159	78187159	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	SNW1	NM_012245	exon12	c.G1143C	p.Q381H	ATTTCTCTGAAGT	.	112.0	33.0	118.0	0.0	.	44	.	.	Atlas-SNP
CEP128	145508	hgsc.bcm.edu	hg19	14	80993294	80993294	+	Silent	SNP	T	T	C	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	CEP128	NM_152446	exon22	c.A2991G	p.G997G	ATATCTTCCATCA	.	56.0	17.0	51.0	0.0	.	146	.	.	Atlas-SNP
AHNAK2	113146	hgsc.bcm.edu	hg19	14	105407441	105407441	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	AHNAK2	NM_138420	exon7	c.A14347G	p.I4783V	AGAGAATAGAAGA	.	171.0	75.0	144.0	0.0	.	719	.	.	Atlas-SNP
AHNAK2	113146	hgsc.bcm.edu	hg19	14	105408464	105408464	+	Missense_Mutation	SNP	T	T	C	rs377277155	alternate_allele	TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	AHNAK2	NM_138420	exon7	c.A13324G	p.S4442G	GCGTACTGTCCAG	.	111.0	48.0	103.0	0.0	.	719	.	.	Atlas-SNP
ACAN	176	hgsc.bcm.edu	hg19	15	89401482	89401482	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	ACAN	NM_001135	exon12	c.C5666T	p.S1889F	TTACATCCCAGAC	.	73.0	28.0	44.0	0.0	.	220	.	.	Atlas-SNP
MTHFSD	64779	hgsc.bcm.edu	hg19	16	86582083	86582083	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	MTHFSD	NM_001159377	exon4	c.G338A	p.C113Y	GTGGCACATTTTC	.	69.0	43.0	117.0	0.0	.	52	.	.	Atlas-SNP
PRPF8	10594	hgsc.bcm.edu	hg19	17	1582362	1582362	+	Silent	SNP	C	C	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	PRPF8	NM_006445	exon11	c.G1548T	p.L516L	CAGGTGCAGGTAG	.	55.0	29.0	56.0	0.0	.	169	.	.	Atlas-SNP
MYH13	8735	hgsc.bcm.edu	hg19	17	10210383	10210383	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	MYH13_ENST00000252172,NS,carcinoma,0,2	MYH13	NM_003802	exon37	c.5170-2A>G	.	GTGTTCTACAAGA	.	43.0	17.0	58.0	0.0	.	533	.	.	Atlas-SNP
PPAN	56342	hgsc.bcm.edu	hg19	19	10220893	10220893	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	PPAN	NM_020230	exon8	c.G793C	p.A265P	ATGCGGGCCCAGC	.	106.0	43.0	103.0	0.0	.	43	.	.	Atlas-SNP
ZNF420	147923	hgsc.bcm.edu	hg19	19	37618604	37618604	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	ZNF420	NM_144689	exon5	c.A711C	p.Q237H	CTCACAACTTACC	.	62.0	18.0	88.0	0.0	.	71	.	.	Atlas-SNP
CYP2B6	1555	hgsc.bcm.edu	hg19	19	41497305	41497305	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	CYP2B6	NM_000767	exon1	c.C95T	p.P32L	TCCCACCAGGGCC	.	88.0	37.0	84.0	0.0	.	79	.	.	Atlas-SNP
ZNF331	55422	hgsc.bcm.edu	hg19	19	54080094	54080094	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	ZNF331	NM_001253801	exon5	c.C280A	p.R94S	CCACAGCGCTCCA	.	202.0	97.0	193.0	0.0	.	66	.	.	Atlas-SNP
PCSK2	5126	hgsc.bcm.edu	hg19	20	17462588	17462588	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	PCSK2	NM_002594	exon12	c.C1790T	p.A597V	AGAGTGCCCCGTA	.	98.0	29.0	101.0	0.0	.	112	.	.	Atlas-SNP
PLTP	5360	hgsc.bcm.edu	hg19	20	44538643	44538643	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	PLTP	NM_182676	exon4	c.G267A	p.M89I	TTGAAGCATCAGC	.	76.0	37.0	93.0	0.0	.	49	.	.	Atlas-SNP
DSCAM	1826	hgsc.bcm.edu	hg19	21	41551019	41551019	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	DSCAM	NM_001271534	exon15	c.T2782C	p.S928P	CCCAGGAGTCTTT	.	126.0	47.0	95.0	0.0	.	347	.	.	Atlas-SNP
ARVCF	421	hgsc.bcm.edu	hg19	22	19965537	19965537	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	ARVCF	NM_001670	exon8	c.G1642T	p.D548Y	GCGCGTCCACCAG	.	55.0	21.0	50.0	0.0	.	54	.	.	Atlas-SNP
TIMP1	7076	hgsc.bcm.edu	hg19	X	47445002	47445002	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	TIMP1	NM_003254	exon5	c.G389T	p.S130I	GGAACAGCCTGAG	.	197.0	84.0	173.0	0.0	.	12	.	.	Atlas-SNP
PQBP1	10084	hgsc.bcm.edu	hg19	X	48759212	48759212	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	PQBP1	NM_001167989	exon4	c.T185G	p.L62R	GCGGGCTCCCTTA	.	105.0	28.0	98.0	0.0	.	24	.	.	Atlas-SNP
CACNA1F	778	hgsc.bcm.edu	hg19	X	49072969	49072969	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	CACNA1F	NM_005183	exon27	c.C3142G	p.P1048A	CATCTGGGTATAC	.	299.0	112.0	250.0	0.0	.	218	.	.	Atlas-SNP
IL1RAPL2	26280	hgsc.bcm.edu	hg19	X	104984619	104984619	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	IL1RAPL2	NM_017416	exon8	c.A983T	p.N328I	TGGCGAATTATAC	.	440.0	189.0	347.0	0.0	.	105	.	.	Atlas-SNP
CXorf56	63932	hgsc.bcm.edu	hg19	X	118699267	118699267	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	CXorf56	NM_001170570	exon1	c.G52T	p.E18X	ATTCCTCCCGGTC	.	275.0	97.0	234.0	0.0	.	26	.	.	Atlas-SNP
CD40LG	959	hgsc.bcm.edu	hg19	X	135741541	135741541	+	Silent	SNP	T	T	C	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	CD40LG	NM_000074	exon5	c.T753C	p.T251T	TGGCACTGGCTTC	.	1401.0	529.0	1240.0	2.0	.	46	.	.	Atlas-SNP
ARMCX6	54470	hgsc.bcm.edu	hg19	X	100870760	100870760	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	ARMCX6	NM_019007	exon3	c.852delC	p.L284fs	.	.	158.0	25.0	125.0	0.0	.	21	.	.	Atlas-INDEL
EHMT2	10919	hgsc.bcm.edu	hg19	6	31855974	31855974	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	EHMT2	NM_006709	exon13	c.1590delG	p.M530fs	.	.	133.0	66.0	110.0	0.0	.	45	.	.	Atlas-INDEL
DST	667	hgsc.bcm.edu	hg19	6	56480983	56480983	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	DST	NM_001723	exon24	c.7283delC	p.T2428fs	.	.	95.0	34.0	88.0	0.0	.	1427	.	.	Atlas-INDEL
FN1	2335	hgsc.bcm.edu	hg19	2	216299510	216299513	+	Frame_Shift_Del	DEL	ATTT	ATTT	-	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	ATTT	ATTT	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	FN1	NM_212476	exon2	c.184_187del	p.62_63del	.	.	77.0	36.0	93.0	0.0	.	521	.	.	Atlas-INDEL
ATP6V1D	51382	hgsc.bcm.edu	hg19	14	67826386	67826386	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	ATP6V1D	NM_015994	exon1	c.31delC	p.P11fs	.	.	71.0	37.0	57.0	0.0	.	21	.	.	Atlas-INDEL
MCM3	4172	hgsc.bcm.edu	hg19	6	52141926	52141940	+	In_Frame_Del	DEL	GGTGGGGATAGCTCG	GGTGGGGATAGCTCG	-	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	GGTGGGGATAGCTCG	GGTGGGGATAGCTCG	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	MCM3	NM_002388	exon8	c.1226_1240del	p.409_414del	.	.	66.0	13.0	53.0	0.0	.	63	.	.	Atlas-INDEL
ACAD11	84129	hgsc.bcm.edu	hg19	3	132337613	132337613	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	ACAD11	NM_032169	exon11	c.1280delT	p.M427fs	.	.	227.0	94.0	188.0	0.0	.	78	.	.	Atlas-INDEL
C1orf35	79169	hgsc.bcm.edu	hg19	1	228290360	228290395	+	Frame_Shift_Del	DEL	GTGGGCTGCTTCTTCACGTTCTTGTAGCCACTGCGA	GTGGGCTGCTTCTTCACGTTCTTGTAGCCACTGCGA	-	novel		TCGA-DD-AADJ-01A-11D-A40R-10	TCGA-DD-AADJ-10A-01D-A40U-10	GTGGGCTGCTTCTTCACGTTCTTGTAGCCACTGCGA	GTGGGCTGCTTCTTCACGTTCTTGTAGCCACTGCGA	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	61b59c1e-a279-4c80-ab24-c01048f2a295	c1da5095-b907-4c39-a7b6-4c603e64b113	.	C1orf35	NM_024319	exon3	c.246_276del	p.82_92del	.	.	72.0	13.0	73.0	0.0	.	17	.	.	Atlas-INDEL
