Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
AKNAD1	254268	genome.wustl.edu	36	1	109196288	109196288	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	1	109196288	109196288	C	T	SNP	C1orf62	NM_152763	human	genbank	54_36p	-1	validated	silent	c.522	p.P174		NULL	-	-	no_errors
ADORA3	140	genome.wustl.edu	36	1	111847261	111847261	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	1	111847261	111847261	A	T	SNP	ADORA3	NM_020683	human	genbank	54_36p	-1	reviewed	missense	c.239	p.F80Y	1	NULL	-	-	no_errors
FAM20B	9917	genome.wustl.edu	36	1	177300122	177300122	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	1	177300122	177300122	G	T	SNP	FAM20B	NM_014864	human	genbank	54_36p	1	validated	missense	c.806	p.G269V	1	NULL	-	-	no_errors
ARHGEF10L	55160	genome.wustl.edu	36	1	17823526	17823526	+	Missense_Mutation	SNP	G	G	A		Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	1	17823526	17823526	G	A	SNP	ARHGEF10L	NM_018125	human	genbank	54_36p	1	validated	missense	c.1258	p.A420T	1	NULL	-	-	no_errors
PTGS2	5743	genome.wustl.edu	36	1	184912345	184912345	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	1	184912345	184912345	C	T	SNP	PTGS2	NM_000963	human	genbank	54_36p	-1	reviewed	missense	c.847	p.G283S	0.99	HMMPfam_An_peroxidase	HMMPfam_An_peroxidase;HMMPfam_EGF;superfamily_Heme-dependent peroxidases;superfamily_EGF/Laminin	-	no_errors
TXLNA	200081	genome.wustl.edu	36	1	32433268	32433268	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	1	32433268	32433268	G	T	SNP	TXLNA	NM_175852	human	genbank	54_36p	1	validated	missense	c.1526	p.G509V	0.14	NULL	-	-	no_errors
EVI5	7813	genome.wustl.edu	36	1	92751926	92751926	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	1	92751926	92751926	G	T	SNP	EVI5	NM_005665	human	genbank	54_36p	-1	validated	missense	c.2308	p.P770T	0.959	NULL	-	-	no_errors
VTI1A	143187	genome.wustl.edu	36	10	114565097	114565097	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	10	114565097	114565097	C	G	SNP	VTI1A	NM_145206	human	genbank	54_36p	1	validated	missense	c.619	p.L207V	1	NULL	-	-	no_errors
PSAP	5660	genome.wustl.edu	36	10	73251668	73251668	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	10	73251668	73251668	G	A	SNP	PSAP	NM_001042465	human	genbank	54_36p	-1	reviewed	missense	c.889	p.P297S	1	NULL	-	-	no_errors
ENSG00000211964	0	genome.wustl.edu	36	14	106064967	106064967	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	14	106064967	106064967	G	T	SNP	ENSG00000211964	ENST00000390624	human	ensembl	54_36p	-1	known	missense	c.243	p.D81E		NULL	-	-	no_stop_codon:bad_bp_length_for_coding_region
NPAT	4863	genome.wustl.edu	36	11	107537471	107537471	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	11	107537471	107537471	T	C	SNP	NPAT	NM_002519	human	genbank	54_36p	-1	validated	silent	c.3552	p.S1184	0.46	NULL	-	-	no_errors
MOGAT2	80168	genome.wustl.edu	36	11	75106597	75106597	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	11	75106597	75106597	C	A	SNP	MOGAT2	NM_025098	human	genbank	54_36p	1	provisional	missense	c.16	p.P6T	0.923	NULL	-	-	no_errors
MOGAT2	80168	genome.wustl.edu	36	11	75116767	75116767	+	Missense_Mutation	SNP	G	G	A		Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	11	75116767	75116767	G	A	SNP	MOGAT2	NM_025098	human	genbank	54_36p	1	provisional	missense	c.580	p.A194T	1	NULL	-	-	no_errors
ITPR2	3709	genome.wustl.edu	36	12	26463359	26463359	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	12	26463359	26463359	T	G	SNP	ITPR2	NM_002223	human	genbank	54_36p	-1	validated	missense	c.7000	p.T2334P	1	NULL	-	-	no_errors
OR4E2	26686	genome.wustl.edu	36	14	21204039	21204039	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	14	21204039	21204039	C	G	SNP	OR4E2	NM_001001912	human	genbank	54_36p	1	validated	silent	c.903	p.L301	0.69	NULL	HMMPfam_7tm_1;superfamily_Family A G protein-coupled receptor-like	-	no_errors
MYH11	4629	genome.wustl.edu	36	16	15743116	15743116	+	Splice_Site	SNP	A	A	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	16	15743116	15743116	A	T	SNP	MYH11	NM_001040114	human	genbank	54_36p	-1	reviewed	splice_site	c.2673+2	e21+2	1	-	-	-	no_errors
LOC100131046	100131046	genome.wustl.edu	36	16	20074259	20074259	+	RNA	SNP	C	C	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	16	20074259	20074259	C	T	SNP	LOC100131046	XR_037711	human	genbank	54_36p	1	model	rna	NULL	NULL	0.132	-	-	-	pseudogene
DNAH3	55567	genome.wustl.edu	36	16	20970551	20970551	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	16	20970551	20970551	A	G	SNP	DNAH3	NM_017539	human	genbank	54_36p	-1	provisional	silent	c.4179	p.Y1393	1	NULL	-	-	no_errors
MEFV	4210	genome.wustl.edu	36	16	3239649	3239649	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	16	3239649	3239649	C	T	SNP	MEFV	NM_000243	human	genbank	54_36p	-1	reviewed	missense	c.1043	p.R348H	0	NULL	HMMPfam_zf-B_box,HMMPfam_SPRY,HMMPfam_PAAD_DAPIN,superfamily_DEATH domain,superfamily_B-box zinc-binding domain	-	no_errors
NUP93	9688	genome.wustl.edu	36	16	55423717	55423717	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	16	55423717	55423717	G	T	SNP	NUP93	NM_014669	human	genbank	54_36p	1	validated	missense	c.1261	p.V421L	1	HMMPfam_NIC	HMMPfam_NIC	-	no_errors
SNORD3A	780851	genome.wustl.edu	36	17	19032095	19032095	+	RNA	SNP	C	C	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	17	19032095	19032095	C	T	SNP	SNORD3A	ENST00000365494	human	ensembl	54_36p	1	known	rna	NULL	NULL	0.99	-	-	-	no_errors
MYO18A	399687	genome.wustl.edu	36	17	24442013	24442013	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	17	24442013	24442013	C	G	SNP	MYO18A	NM_078471	human	genbank	54_36p	-1	validated	missense	c.5245	p.E1749Q	1	NULL	HMMPfam_Myosin_head;superfamily_Regulator of G-protein signaling RGS;superfamily_P-loop containing nucleoside triphosphate hydrolases;HMMPfam_IQ;HMMPfam_PDZ;superfamily_PDZ domain-like	-	no_errors
PECAM1	5175	genome.wustl.edu	36	17	59791381	59791381	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	17	59791381	59791381	C	T	SNP	PECAM1	ENST00000375748	human	ensembl	54_36p	-1	known	missense	c.130	p.V44I		NULL	-	-	no_stop_codon
TP53	7157	genome.wustl.edu	36	17	7518305	7518305	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	17	7518305	7518305	T	C	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.701	p.Y234C	1	HMMPfam_P53	superfamily_p53-like transcription factors;superfamily_p53 tetramerization domain;P53_tetramer;HMMPfam_P53_tetramer;P53;HMMPfam_P53;P53_TAD;HMMPfam_P53_TAD	-	no_errors
CHST9	83539	genome.wustl.edu	36	18	22750325	22750325	+	Missense_Mutation	SNP	C	C	T		Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	18	22750325	22750325	C	T	SNP	CHST9	NM_031422	human	genbank	54_36p	-1	validated	missense	c.1228	p.V410M	0.961	NULL	-	-	no_errors
EPS15L1	58513	genome.wustl.edu	36	19	16333718	16333718	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	19	16333718	16333718	C	G	SNP	EPS15L1	NM_021235	human	genbank	54_36p	-1	provisional	missense	c.2458	p.D820H	1	NULL	HMMPfam_efhand;superfamily_Prefoldin;superfamily_Ferritin-like;superfamily_EF-hand	-	no_errors
PDE4C	5143	genome.wustl.edu	36	19	18188666	18188666	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	19	18188666	18188666	A	G	SNP	PDE4C	NM_000923	human	genbank	54_36p	-1	validated	missense	c.1370	p.L457P	1	HMMPfam_PDEase_I	HMMPfam_PDEase_I;superfamily_HD-domain/PDEase-like	-	no_errors
TMEM59L	25789	genome.wustl.edu	36	19	18588888	18588888	+	Missense_Mutation	SNP	C	C	A		Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	19	18588888	18588888	C	A	SNP	TMEM59L	NM_012109	human	genbank	54_36p	1	reviewed	missense	c.640	p.P214T	0.531	NULL	-	-	no_errors
ATP13A1	57130	genome.wustl.edu	36	19	19617787	19617787	+	Nonsense_Mutation	SNP	G	G	A		Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	19	19617787	19617787	G	A	SNP	ATP13A1	NM_020410	human	genbank	54_36p	-1	validated	nonsense	c.2902	p.Q968*	0.991	NULL	HMMPfam_Hydrolase,HMMPfam_E1-E2_ATPase,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M	-	no_errors
NLRP13	126204	genome.wustl.edu	36	19	61099174	61099174	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	19	61099174	61099174	C	A	SNP	NLRP13	NM_176810	human	genbank	54_36p	-1	validated	missense	c.3081	p.M1027I	0.05	NULL	HMMPfam_LRR_1;HMMPfam_PAAD_DAPIN;HMMPfam_NACHT;superfamily_DEATH domain;superfamily_RNI-like;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ZNF304	57343	genome.wustl.edu	36	19	62559698	62559698	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	19	62559698	62559698	T	C	SNP	ZNF304	NM_020657	human	genbank	54_36p	1	validated	missense	c.649	p.Y217H		NULL	HMMPfam_KRAB;HMMPfam_zf-C2H2;superfamily_KRAB domain (Kruppel-associated box Pfam 01352);superfamily_C2H2 and C2HC zinc fingers	-	no_errors
RDH8	50700	genome.wustl.edu	36	19	9988889	9988889	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	19	9988889	9988889	T	A	SNP	RDH8	NM_015725	human	genbank	54_36p	1	validated	missense	c.260	p.L87Q	1	HMMPfam_adh_short	HMMPfam_adh_short;superfamily_NAD(P)-binding Rossmann-fold domains	-	no_errors
SULT1C2	6819	genome.wustl.edu	36	2	108287559	108287559	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	2	108287559	108287559	A	G	SNP	SULT1C2	NM_176825	human	genbank	54_36p	1	reviewed	missense	c.506	p.E169G	0.98	HMMPfam_Sulfotransfer_1	HMMPfam_Sulfotransfer_1;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SCN1A	6323	genome.wustl.edu	36	2	166560768	166560768	+	Splice_Site	SNP	C	C	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	2	166560768	166560768	C	T	SNP	SCN1A	NM_006920	human	genbank	54_36p	-1	validated	splice_site	c.4548+1	e24+1	1	-	-	-	no_errors
PPIG	9360	genome.wustl.edu	36	2	170201593	170201593	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	2	170201593	170201593	A	G	SNP	PPIG	NM_004792	human	genbank	54_36p	1	validated	missense	c.1579	p.S527G	0.93	NULL	-	-	no_errors
DNMT3A	1788	genome.wustl.edu	36	2	25310663	25310663	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	2	25310663	25310663	C	T	SNP	DNMT3A	NM_022552	human	genbank	54_36p	-1	reviewed	missense	c.2728	p.A910T	1	NULL	HMMPfam_PWWP;HMMPfam_DNA_methylase;superfamily_FYVE/PHD zinc finger;superfamily_S-adenosyl-L-methionine-dependent methyltransferases;superfamily_Tudor/PWWP/MBT	-	no_errors
C20orf70	140683	genome.wustl.edu	36	20	31224419	31224419	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	20	31224419	31224419	G	A	SNP	C20orf70	NM_080574	human	genbank	54_36p	1	validated	missense	c.178	p.V60I		NULL	-	-	no_errors
TRAPPC10	7109	genome.wustl.edu	36	21	44276400	44276400	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	21	44276400	44276400	G	A	SNP	TRAPPC10	NM_003274	human	genbank	54_36p	1	reviewed	missense	c.68	p.C23Y	1	NULL	superfamily_TPR-like	-	no_errors
DEPDC5	9681	genome.wustl.edu	36	22	30536507	30536507	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	22	30536507	30536507	C	T	SNP	DEPDC5	NM_014662	human	genbank	54_36p	1	validated	missense	c.1325	p.S442F	1	NULL	"HMMPfam_DEP;superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
EIF3L	51386	genome.wustl.edu	36	22	36596199	36596199	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	22	36596199	36596199	C	G	SNP	EIF3L	NM_016091	human	genbank	54_36p	1	validated	missense	c.650	p.S217C	1	NULL	-	-	no_errors
POLQ	10721	genome.wustl.edu	36	3	122690091	122690091	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	3	122690091	122690091	T	A	SNP	POLQ	NM_199420	human	genbank	54_36p	-1	validated	silent	c.4377	p.I1459		NULL	HMMPfam_DNA_pol_A;HMMPfam_Helicase_C;HMMPfam_DEAD;superfamily_Ribonuclease H-like;superfamily_Immunoglobulin;superfamily_P-loop containing nucleoside triphosphate hydrolases;superfamily_DNA/RNA polymerases	-	no_errors
PDIA5	10954	genome.wustl.edu	36	3	124362860	124362860	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	3	124362860	124362860	T	A	SNP	PDIA5	NM_006810	human	genbank	54_36p	1	provisional	silent	c.1347	p.I449	0.976	NULL	-	-	no_errors
XPC	7508	genome.wustl.edu	36	3	14186991	14186991	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	3	14186991	14186991	G	T	SNP	XPC	ENST00000285021	human	ensembl	54_36p	-1	known	missense	c.363	p.D121E	0.01	NULL	HMMPfam_Rad4	-	no_errors
CLASP2	23122	genome.wustl.edu	36	3	33518188	33518188	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	3	33518188	33518188	T	A	SNP	CLASP2	NM_015097	human	genbank	54_36p	-1	validated	missense	c.4394	p.D1465V	1	NULL	HMMPfam_HEAT;superfamily_ARM repeat	-	no_errors
SETD5	55209	genome.wustl.edu	36	3	9450570	9450570	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	3	9450570	9450570	G	A	SNP	SETD5	NM_001080517	human	genbank	54_36p	1	provisional	missense	c.113	p.S38N	1	NULL	-	-	no_errors
ACSL1	2180	genome.wustl.edu	36	4	185916019	185916019	+	Nonsense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	4	185916019	185916019	C	T	SNP	ACSL1	NM_001995	human	genbank	54_36p	-1	reviewed	nonsense	c.1832	p.W611*	1	NULL	HMMPfam_AMP-binding;superfamily_Acetyl-CoA synthetase-like	-	no_errors
GNPDA2	132789	genome.wustl.edu	36	4	44413920	44413920	+	Nonsense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	4	44413920	44413920	T	A	SNP	GNPDA2	NM_138335	human	genbank	54_36p	-1	provisional	nonsense	c.376	p.K126*	0.95	HMMPfam_Glucosamine_iso	HMMPfam_Glucosamine_iso;superfamily_NagB/RpiA/CoA transferase-like	-	no_errors
EVC	2121	genome.wustl.edu	36	4	5784250	5784250	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	4	5784250	5784250	G	T	SNP	EVC	NM_153717	human	genbank	54_36p	1	reviewed	silent	c.582	p.R194	0.04	NULL	-	-	no_errors
LVRN	206338	genome.wustl.edu	36	5	115364028	115364028	+	Splice_Site	SNP	G	G	C	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	5	115364028	115364028	G	C	SNP	LVRN	NM_173800	human	genbank	54_36p	1	validated	splice_site	c.1516-1	e8-1	1	-	-	-	no_errors
SLC12A2	6558	genome.wustl.edu	36	5	127512432	127512432	+	Missense_Mutation	SNP	T	T	G		Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	5	127512432	127512432	T	G	SNP	SLC12A2	NM_001046	human	genbank	54_36p	1	validated	missense	c.1969	p.L657V	1	NULL	-	-	no_errors
PCDHGC5	56097	genome.wustl.edu	36	5	140849910	140849910	+	Missense_Mutation	SNP	C	A	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	A	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	5	140849910	140849910	C	A	SNP	PCDHGC5	NM_018929	human	genbank	54_36p	1	reviewed	missense	c.919	p.P307T	0.54	NULL	-	-	no_errors
C5orf42	65250	genome.wustl.edu	36	5	37205347	37205347	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	5	37205347	37205347	G	T	SNP	C5orf42	NM_023073	human	genbank	54_36p	-1	predicted	missense	c.3176	p.S1059Y	0.01	NULL	-	-	no_errors
GPR98	84059	genome.wustl.edu	36	5	90088717	90088717	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	5	90088717	90088717	G	C	SNP	GPR98	NM_032119	human	genbank	54_36p	1	reviewed	missense	c.11923	p.E3975Q	0.98	NULL	HMMPfam_GPS;HMMPfam_Calx-beta;HMMPfam_EPTP;superfamily_Concanavalin A-like lectins/glucanases;superfamily_Phosphoglucomutase first 3 domains	-	no_errors
OR5AK3P	81228	genome.wustl.edu	36	11	56495874	56495874	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	11	56495874	56495874	G	A	SNP	OR5AK3P	ENST00000326876	human	ensembl	54_36p	1	known	missense	c.774	p.M258I		NULL	-	-	no_errors
DNAH8	1769	genome.wustl.edu	36	6	39106034	39106034	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	6	39106034	39106034	A	T	SNP	DNAH8	NM_001371	human	genbank	54_36p	1	validated	missense	c.13361	p.K4454M	1	HMMPfam_Dynein_heavy	HMMPfam_AAA_5;HMMPfam_DHC_N1;HMMPfam_DHC_N2;superfamily_Spectrin repeat;superfamily_P-loop containing nucleoside triphosphate hydrolases;HMMPfam_Dynein_heavy	-	no_errors
PRPH2	5961	genome.wustl.edu	36	6	42797997	42797997	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	6	42797997	42797997	T	A	SNP	PRPH2	NM_000322	human	genbank	54_36p	-1	reviewed	missense	c.54	p.Q18H	1	HMMPfam_Tetraspannin	HMMPfam_Tetraspannin;superfamily_Tetraspanin	-	no_errors
RIMS1	22999	genome.wustl.edu	36	6	72735448	72735448	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	6	72735448	72735448	C	G	SNP	RIMS1	NM_014989	human	genbank	54_36p	1	validated	missense	c.206	p.T69R	1	NULL	HMMPfam_C2;HMMPfam_PDZ;superfamily_PDZ domain-like;superfamily_C2 domain (Calcium/lipid-binding domain CaLB);superfamily_FYVE/PHD zinc finger	-	no_errors
UBE3C	9690	genome.wustl.edu	36	7	156733849	156733849	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	7	156733849	156733849	G	A	SNP	UBE3C	NM_014671	human	genbank	54_36p	1	validated	silent	c.2508	p.E836	1	HMMPfam_HECT	HMMPfam_IQ;HMMPfam_HECT;superfamily_Dihydrofolate reductases;superfamily_Hect E3 ligase catalytic domain	-	no_errors
DFNA5	1687	genome.wustl.edu	36	7	24750786	24750786	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	7	24750786	24750786	G	A	SNP	DFNA5	NM_004403	human	genbank	54_36p	-1	reviewed	silent	c.324	p.R108	0.03	NULL	-	-	no_errors
ABCB4	5244	genome.wustl.edu	36	7	86870405	86870405	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	7	86870405	86870405	C	T	SNP	ABCB4	NM_018849	human	genbank	54_36p	-1	reviewed	silent	c.3636	p.L1212	1	HMMPfam_ABC_tran	HMMPfam_ABC_membrane;HMMPfam_ABC_tran;superfamily_P-loop containing nucleoside triphosphate hydrolases;superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain	-	no_errors
CSMD3	114788	genome.wustl.edu	36	8	113392466	113392466	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	8	113392466	113392466	C	A	SNP	CSMD3	NM_198123	human	genbank	54_36p	-1	validated	missense	c.7802	p.R2601L	1	HMMPfam_Sushi	HMMPfam_Sushi;HMMPfam_CUB;superfamily_Spermadhesin CUB domain;superfamily_Complement control module/SCR domain	-	no_errors
FAM91A1	157769	genome.wustl.edu	36	8	124881019	124881019	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	8	124881019	124881019	C	G	SNP	FAM91A1	NM_144963	human	genbank	54_36p	1	validated	missense	c.1639	p.P547A	1	NULL	-	-	no_errors
ST18	9705	genome.wustl.edu	36	8	53255238	53255238	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	8	53255238	53255238	C	T	SNP	ST18	NM_014682	human	genbank	54_36p	-1	validated	missense	c.274	p.A92T	0.91	NULL	-	-	no_errors
OMD	4958	genome.wustl.edu	36	9	94218967	94218967	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	9	94218967	94218967	G	T	SNP	OMD	NM_005014	human	genbank	54_36p	-1	validated	missense	c.695	p.P232H	1	NULL	HMMPfam_LRRNT;HMMPfam_LRR_1;superfamily_L domain-like	-	no_errors
LOC642943	642943	genome.wustl.edu	36	9	94688065	94688065	+	RNA	SNP	G	G	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	9	94688065	94688065	G	T	SNP	LOC642943	XR_039168	human	genbank	54_36p	1	model	rna	NULL	NULL	0.01	-	-	-	pseudogene
KIAA1210	57481	genome.wustl.edu	36	X	118123066	118123066	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	X	118123066	118123066	A	T	SNP	KIAA1210	NM_020721	human	genbank	54_36p	-1	validated	missense	c.985	p.L329M		NULL	-	-	no_errors
AIFM1	9131	genome.wustl.edu	36	X	129093440	129093440	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	X	129093440	129093440	G	T	SNP	AIFM1	NM_004208	human	genbank	54_36p	-1	reviewed	silent	c.1464	p.P488	0.49	NULL	Pyr_redox;HMMPfam_Pyr_redox;Pyr_redox_2;HMMPfam_Pyr_redox_2;FAD/NAD(P)-binding domain;superfamily_FAD/NAD(P)-binding domain;FAD/NAD-linked reductases dimerisation (C-terminal) domain;superfamily_FAD/NAD-linked reductases dimerisation (C-terminal) domain	-	no_errors
MST4	51765	genome.wustl.edu	36	X	131034719	131034719	+	Silent	SNP	C	C	T		Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	X	131034719	131034719	C	T	SNP	MST4	NM_016542	human	genbank	54_36p	1	reviewed	silent	c.1143	p.L381	0.925	NULL	Pkinase,HMMPfam_Pkinase	-	no_errors
PFKFB1	5207	genome.wustl.edu	36	X	55037157	55037157	+	Silent	SNP	T	T	G		Unknown	TCGA-04-1361-01A-01W-0494-09	TCGA-04-1361-11A-01W-0494-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	0fc567bd-2201-4f3d-820e-2c0dbe58da6f	d3ed75c6-ca30-4f83-8b1f-7ee17b3ca79d	X	55037157	55037157	T	G	SNP	PFKFB1	NM_002625	human	genbank	54_36p	-1	reviewed	silent	c.9	p.P3	0.922	NULL	HMMPfam_PGAM,HMMPfam_6PF2K,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_Phosphoglycerate mutase-like	-	no_errors
